AlfalfaGEDB | MS.gene60849

M. sativa cultivar XinJiangDaYe / MS.gene60849

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60849.t1	XP_003591770.1	98.6	214	3	0	1	214	71	284	4.60E-116	427.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60849.t1	Q8L440	71.6	211	54	2	3	213	167	371	3.7e-82	305.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60849.t1	G7I363	98.6	214	3	0	1	214	71	284	3.3e-116	427.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049609	MS.gene60849	0.805877	1.08E-49	-1.69E-46
MS.gene049794	MS.gene60849	0.824001	1.02E-53	-1.69E-46
MS.gene050747	MS.gene60849	0.831424	1.68E-55	-1.69E-46
MS.gene050950	MS.gene60849	0.825285	5.09E-54	-1.69E-46
MS.gene051387	MS.gene60849	0.818981	1.48E-52	-1.69E-46
MS.gene051858	MS.gene60849	0.807385	5.19E-50	-1.69E-46
MS.gene052982	MS.gene60849	0.82355	1.30E-53	-1.69E-46
MS.gene053207	MS.gene60849	0.814193	1.74E-51	-1.69E-46
MS.gene053436	MS.gene60849	0.803348	3.64E-49	-1.69E-46
MS.gene053574	MS.gene60849	0.817355	3.44E-52	-1.69E-46
MS.gene054927	MS.gene60849	0.844543	7.08E-59	-1.69E-46
MS.gene055722	MS.gene60849	0.805502	1.29E-49	-1.69E-46
MS.gene058700	MS.gene60849	0.801375	9.28E-49	-1.69E-46
MS.gene059902	MS.gene60849	0.811489	6.82E-51	-1.69E-46
MS.gene060837	MS.gene60849	0.814059	1.87E-51	-1.69E-46
MS.gene06092	MS.gene60849	0.804484	2.11E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60849.t1	MTR_1g092860	98.598	214	3	0	1	214	71	284	1.07e-160	445
MS.gene60849.t1	MTR_1g041745	46.000	100	53	1	3	102	76	174	6.70e-26	99.0
MS.gene60849.t1	MTR_1g041745	46.809	94	50	0	3	96	76	169	1.06e-25	99.8
MS.gene60849.t1	MTR_1g075460	43.617	94	53	0	3	96	94	187	2.30e-23	94.0
MS.gene60849.t1	MTR_7g105260	51.220	82	40	0	123	204	33	114	8.92e-23	89.7
MS.gene60849.t1	MTR_6g477870	48.052	77	40	0	123	199	96	172	5.99e-22	89.0
MS.gene60849.t1	MTR_7g099940	41.509	106	62	0	99	204	12	117	1.01e-21	87.0
MS.gene60849.t1	MTR_4g081520	45.000	80	44	0	124	203	53	132	3.73e-20	83.2
MS.gene60849.t1	MTR_6g477870	49.254	67	34	0	123	189	96	162	1.88e-18	79.3
MS.gene60849.t1	MTR_4g081510	40.964	83	46	1	124	206	46	125	1.14e-17	77.8
MS.gene60849.t1	MTR_4g063560	46.053	76	41	0	123	198	34	109	1.98e-17	75.1
MS.gene60849.t1	MTR_2g096560	44.156	77	43	0	123	199	8	84	5.09e-17	73.6
MS.gene60849.t1	MTR_3g084040	38.947	95	57	1	104	198	18	111	1.63e-16	73.6
MS.gene60849.t1	MTR_7g013730	34.211	114	67	1	99	212	17	122	2.11e-16	75.9
MS.gene60849.t1	MTR_7g013740	34.951	103	65	1	100	202	20	120	2.43e-16	73.2
MS.gene60849.t1	MTR_4g109540	36.471	85	54	0	118	202	38	122	3.02e-16	75.5
MS.gene60849.t1	MTR_3g029580	36.559	93	56	1	121	213	31	120	1.64e-15	70.9
MS.gene60849.t1	MTR_3g084040	37.647	85	52	1	104	188	18	101	1.91e-15	69.7
MS.gene60849.t1	MTR_4g117350	40.426	94	45	1	106	199	66	148	1.96e-15	71.2
MS.gene60849.t1	MTR_3g080130	40.000	80	48	0	123	202	37	116	3.49e-15	69.7
MS.gene60849.t1	MTR_2g011000	32.990	97	65	0	2	98	68	164	3.84e-15	71.6
MS.gene60849.t1	MTR_3g025880	37.209	86	54	0	117	202	39	124	4.00e-15	73.6
MS.gene60849.t1	MTR_4g109540	34.409	93	53	1	118	202	38	130	8.28e-14	68.9
MS.gene60849.t1	MTR_8g077840	38.554	83	49	1	122	202	135	217	4.49e-13	67.8
MS.gene60849.t1	MTR_4g088010	48.052	77	39	1	122	198	76	151	4.54e-13	67.4
MS.gene60849.t1	MTR_4g117350	40.244	82	38	1	106	187	66	136	4.88e-13	64.3
MS.gene60849.t1	MTR_4g120340	33.708	89	59	0	10	98	90	178	6.05e-13	66.2
MS.gene60849.t1	MTR_4g070140	38.462	78	48	0	123	200	9	86	6.08e-13	65.1
MS.gene60849.t1	MTR_6g043040	35.484	93	59	1	10	101	76	168	7.68e-13	64.7
MS.gene60849.t1	MTR_5g071540	34.737	95	62	0	105	199	22	116	2.72e-12	62.4
MS.gene60849.t1	MTR_4g070080	34.615	78	51	0	123	200	7	84	2.95e-12	62.0
MS.gene60849.t1	MTR_2g078090	34.343	99	64	1	10	108	96	193	5.90e-12	64.3
MS.gene60849.t1	MTR_7g117495	36.667	90	56	1	109	198	5	93	9.70e-12	62.8
MS.gene60849.t1	MTR_4g070080	35.065	77	50	0	123	199	7	83	9.97e-12	61.2
MS.gene60849.t1	MTR_7g117495	36.667	90	56	1	109	198	5	93	1.02e-11	62.8
MS.gene60849.t1	MTR_7g096260	36.047	86	55	0	123	208	179	264	1.26e-11	63.5
MS.gene60849.t1	MTR_7g096260	36.047	86	55	0	123	208	193	278	1.27e-11	63.5
MS.gene60849.t1	MTR_8g024520	38.298	94	54	1	123	212	26	119	1.88e-11	62.4
MS.gene60849.t1	MTR_8g024520	38.298	94	54	1	123	212	26	119	1.91e-11	62.4
MS.gene60849.t1	MTR_3g116130	37.895	95	55	2	123	214	30	123	2.67e-11	62.0
MS.gene60849.t1	MTR_7g094670	33.945	109	64	1	98	198	867	975	3.61e-11	62.4
MS.gene60849.t1	MTR_3g029580	40.299	67	40	0	121	187	31	97	3.67e-11	59.3
MS.gene60849.t1	MTR_3g116130	37.895	95	55	2	123	214	30	123	4.40e-11	61.6
MS.gene60849.t1	MTR_4g070190	33.333	78	52	0	123	200	9	86	5.27e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60849.t1	AT3G20930	71.564	211	54	2	3	213	167	371	1.70e-107	314
MS.gene60849.t1	AT3G20930	50.000	86	43	0	11	96	72	157	4.42e-27	106
MS.gene60849.t1	AT3G20930	69.907	216	54	3	3	213	167	376	2.53e-105	308
MS.gene60849.t1	AT3G20930	50.000	86	43	0	11	96	72	157	3.84e-27	106
MS.gene60849.t1	AT1G32580	47.872	94	49	0	3	96	87	180	1.56e-26	102
MS.gene60849.t1	AT2G35240	41.818	110	64	0	3	112	90	199	1.23e-23	94.7
MS.gene60849.t1	AT1G73530	47.778	90	44	1	123	212	78	164	6.94e-22	89.0
MS.gene60849.t1	AT4G13850	40.741	108	61	2	99	204	13	119	8.38e-20	82.4
MS.gene60849.t1	AT4G13850	40.385	104	61	1	99	202	13	115	9.64e-20	81.6
MS.gene60849.t1	AT4G13850	40.741	108	61	2	99	204	13	119	1.05e-19	82.4
MS.gene60849.t1	AT4G13850	40.741	108	61	2	99	204	13	119	1.18e-19	82.4
MS.gene60849.t1	AT5G06210	41.905	105	56	3	98	199	9	111	2.23e-19	81.3
MS.gene60849.t1	AT3G23830	43.023	86	47	1	121	204	34	119	5.53e-19	80.1
MS.gene60849.t1	AT3G23830	43.023	86	47	1	121	204	34	119	5.53e-19	80.1
MS.gene60849.t1	AT2G37510	46.250	80	43	0	117	196	29	108	6.98e-19	79.7
MS.gene60849.t1	AT4G20030	48.052	77	40	0	123	199	41	117	2.66e-18	78.6
MS.gene60849.t1	AT2G27330	40.964	83	46	1	124	203	23	105	4.74e-18	77.0
MS.gene60849.t1	AT3G46020	44.156	77	43	0	123	199	8	84	6.02e-18	76.3
MS.gene60849.t1	AT5G54580	42.105	76	44	0	124	199	58	133	5.42e-17	75.1
MS.gene60849.t1	AT3G26420	44.156	77	43	0	123	199	8	84	8.52e-17	76.6
MS.gene60849.t1	AT5G47320	37.143	105	65	1	98	202	8	111	1.51e-16	75.5
MS.gene60849.t1	AT5G61030	34.343	99	63	1	100	198	20	116	1.27e-15	74.3
MS.gene60849.t1	AT5G61030	34.343	99	63	1	100	198	20	116	1.27e-15	74.3
MS.gene60849.t1	AT1G11430	32.990	97	65	0	2	98	80	176	1.32e-15	73.2
MS.gene60849.t1	AT1G74230	40.000	80	47	1	119	198	31	109	2.86e-14	70.5
MS.gene60849.t1	AT2G46780	41.000	100	52	2	119	211	19	118	3.70e-14	70.5
MS.gene60849.t1	AT2G46780	41.000	100	52	2	119	211	19	118	3.70e-14	70.5
MS.gene60849.t1	AT4G39260	37.179	78	49	0	123	200	7	84	4.80e-14	65.9
MS.gene60849.t1	AT4G39260	37.662	77	48	0	123	199	7	83	1.99e-13	65.1
MS.gene60849.t1	AT2G37510	35.238	105	43	1	117	196	29	133	2.03e-13	65.9
MS.gene60849.t1	AT5G59860	42.466	73	37	1	127	199	76	143	2.11e-13	65.9
MS.gene60849.t1	AT3G50670	37.179	78	49	0	122	199	138	215	2.18e-13	68.6
MS.gene60849.t1	AT2G22090	37.234	94	58	1	119	212	101	193	2.23e-13	68.2
MS.gene60849.t1	AT2G22090	37.234	94	58	1	119	212	101	193	2.36e-13	68.2
MS.gene60849.t1	AT4G39260	37.662	77	48	0	123	199	7	83	4.90e-13	65.1
MS.gene60849.t1	AT3G15000	37.079	89	55	1	10	98	98	185	1.98e-12	65.9
MS.gene60849.t1	AT5G59865	48.052	77	40	0	123	199	27	103	2.29e-12	62.0
MS.gene60849.t1	AT4G13860	36.986	73	46	0	123	195	4	76	3.75e-12	60.5
MS.gene60849.t1	AT3G08000	39.474	76	46	0	123	198	42	117	6.17e-12	61.6
MS.gene60849.t1	AT2G19380	31.915	94	63	1	114	207	400	492	9.15e-12	63.9
MS.gene60849.t1	AT3G15010	35.165	91	58	1	110	200	63	152	1.45e-11	63.2
MS.gene60849.t1	AT3G15010	35.165	91	58	1	110	200	63	152	1.45e-11	63.2
MS.gene60849.t1	AT2G21660	33.766	77	51	0	123	199	9	85	2.47e-11	60.1
MS.gene60849.t1	AT1G22910	36.667	90	53	1	123	208	14	103	2.87e-11	61.6
MS.gene60849.t1	AT2G21660	33.766	77	51	0	123	199	9	85	3.33e-11	60.1
MS.gene60849.t1	AT1G22910	36.667	90	53	1	123	208	14	103	4.09e-11	61.2
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT3G56860	40.741	81	47	1	122	202	140	219	4.55e-11	62.0
MS.gene60849.t1	AT2G22100	33.333	99	59	2	114	211	155	247	5.47e-11	61.6
MS.gene60849.t1	AT3G07810	32.773	119	67	3	99	211	83	194	6.79e-11	61.2
MS.gene60849.t1	AT3G07810	32.773	119	67	3	99	211	83	194	7.25e-11	61.2
MS.gene60849.t1	AT3G06790	31.683	101	60	2	2	98	87	182	8.08e-11	60.1
MS.gene60849.t1	AT1G22910	36.667	90	53	1	123	208	14	103	9.08e-11	60.8

Find 46 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTCATGGAAAACCAATTT+TGG	0.112663	1.4:-73147321	MS.gene60849:CDS
TACTTACTTTCCCATGATTT+TGG	0.210808	1.4:+73147464	None:intergenic
TTCACAACAAAACCCAAAAT+TGG	0.220232	1.4:+73147308	None:intergenic
CATATGTTCAGGTAGAAATT+TGG	0.220805	1.4:-73146200	MS.gene60849:intron
TGACTTGCTTCAGAAGAATT+TGG	0.222835	1.4:+73146160	None:intergenic
TTGTGCGTGCAGATTATTAA+TGG	0.253086	1.4:-73145501	MS.gene60849:intron
CAATGCTTTGAATTTCCATT+AGG	0.287884	1.4:+73147564	None:intergenic
GATATGTTGTTGTTCCCTAA+TGG	0.313873	1.4:-73147579	MS.gene60849:CDS
AATGCTTTGAATTTCCATTA+GGG	0.351537	1.4:+73147565	None:intergenic
CGCGCCGCATTTGAAGGCTT+TGG	0.352596	1.4:-73145869	MS.gene60849:CDS
TGGTCAAAATTTGAGCATAA+TGG	0.352734	1.4:+73147484	None:intergenic
TGTGTATATATCATGTTTCA+TGG	0.359894	1.4:-73147335	MS.gene60849:CDS
ATGGTCAACAATTTGAGCTT+TGG	0.361173	1.4:+73147503	None:intergenic
TCAGACTCAAAATTGTCATC+TGG	0.388385	1.4:+73147130	None:intergenic
GCACGACCCTTGTTGTATCT+TGG	0.392813	1.4:+73145441	None:intergenic
ACCTTACGCGCCGCATTTGA+AGG	0.398224	1.4:-73145875	MS.gene60849:CDS
TTCTTATCAAGCAGATGGTC+TGG	0.401047	1.4:+73145419	None:intergenic
AAAGCATTGGGTTGTTAGAA+TGG	0.404538	1.4:-73147550	MS.gene60849:CDS
TAATGGAAATTCAAAGCATT+GGG	0.410201	1.4:-73147562	MS.gene60849:CDS
GATTGTGGTGCAGGTGTGCC+TGG	0.428716	1.4:-73147169	MS.gene60849:intron
AAATTCTTCTGAAGCAAGTC+AGG	0.439004	1.4:-73146158	MS.gene60849:CDS
GCCTTCAAATGCGGCGCGTA+AGG	0.441311	1.4:+73145874	None:intergenic
CTAATGGAAATTCAAAGCAT+TGG	0.444153	1.4:-73147563	MS.gene60849:CDS
TTCAATAAATGCATAACCCT+TGG	0.455487	1.4:+73145716	None:intergenic
CGACCCTTGTTGTATCTTGG+TGG	0.456934	1.4:+73145444	None:intergenic
TTATAGATAAAATTTCAAAA+AGG	0.469097	1.4:-73145740	MS.gene60849:CDS
GTATCTTGGTGGGGTAGTCT+TGG	0.475114	1.4:+73145455	None:intergenic
GACCCTTGTTGTATCTTGGT+GGG	0.480451	1.4:+73145445	None:intergenic
GTTGTTTGTTTGCAGTGAAA+AGG	0.483537	1.4:-73147367	MS.gene60849:intron
TCTGAAAATAAGGATTATGA+AGG	0.486651	1.4:-73147112	MS.gene60849:intron
CTCTTTGAGTGCTGCACTTG+CGG	0.491061	1.4:+73145677	None:intergenic
TATTAATGGCTGGATGATAG+TGG	0.526032	1.4:-73145487	MS.gene60849:CDS
GGCTTTGGTGAGCTTGTTGA+AGG	0.526097	1.4:-73145854	MS.gene60849:intron
ACCCTTGTTGTATCTTGGTG+GGG	0.547772	1.4:+73145446	None:intergenic
TTGGTAACAACACCAACAGC+AGG	0.553041	1.4:+73147522	None:intergenic
TGCACTTGCGGCCTCCTCTG+TGG	0.559303	1.4:+73145689	None:intergenic
GCAGCACTCAAAGAGATGAA+TGG	0.574975	1.4:-73145669	MS.gene60849:CDS
GGCTGAACAGACAAGACACC+AGG	0.582996	1.4:+73147151	None:intergenic
GCGTGCAGATTATTAATGGC+TGG	0.585212	1.4:-73145497	MS.gene60849:intron
CTCACCAAAGCCTTCAAATG+CGG	0.607563	1.4:+73145865	None:intergenic
TACCCCACCAAGATACAACA+AGG	0.648898	1.4:-73145448	MS.gene60849:CDS
TATTGAATACACCACAGAGG+AGG	0.649244	1.4:-73145700	MS.gene60849:CDS
AGAATGGATAAACCTGCTGT+TGG	0.670334	1.4:-73147534	MS.gene60849:CDS
ACTCAAAGAGATGAATGGCA+AGG	0.678432	1.4:-73145664	MS.gene60849:intron
ACCCCACCAAGATACAACAA+GGG	0.762422	1.4:-73145447	MS.gene60849:CDS
ATTTATTGAATACACCACAG+AGG	0.775447	1.4:-73145703	MS.gene60849:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATATTATAAATTTACCT+AGG	-	chr1.4:73145962-73145981	MS.gene60849:intron	10.0%
!!	ATAAATATATATGTATGTAT+TGG	-	chr1.4:73146429-73146448	MS.gene60849:intron	10.0%
!!	TTATAGATAAAATTTCAAAA+AGG	-	chr1.4:73147261-73147280	MS.gene60849:intron	10.0%
!!!	TTTTTTCTTTCTTTTTTATT+GGG	-	chr1.4:73145580-73145599	MS.gene60849:intron	10.0%
!!!	TTTTTTTCTTTCTTTTTTAT+TGG	-	chr1.4:73145579-73145598	MS.gene60849:intron	10.0%
!!	TGTGTTAATTTATATTTCAT+TGG	-	chr1.4:73146037-73146056	MS.gene60849:intron	15.0%
!!	AATCATAATAGAAAGAAGTT+TGG	-	chr1.4:73147459-73147478	MS.gene60849:intron	20.0%
!!	GAAGCATAAATAAATACTTT+GGG	-	chr1.4:73147023-73147042	MS.gene60849:intron	20.0%
!!!	ACTGCTAATTTTAAAAATAC+AGG	+	chr1.4:73146464-73146483	None:intergenic	20.0%
!!!	CGCTTTTACTAATAAATAAA+TGG	-	chr1.4:73147216-73147235	MS.gene60849:intron	20.0%
!!!	TAATTCAAACTTTGAAACAA+AGG	+	chr1.4:73145771-73145790	None:intergenic	20.0%
!	AAAATATCATCCTAGATACA+AGG	+	chr1.4:73146018-73146037	None:intergenic	25.0%
!	AAAATTTCAAAAAGGTCCAA+GGG	-	chr1.4:73147269-73147288	MS.gene60849:intron	25.0%
!	AATGTGTGGAATTTACAAAA+CGG	+	chr1.4:73145919-73145938	None:intergenic	25.0%
!	ATCTAAATTGAGCAATCAAT+TGG	+	chr1.4:73146361-73146380	None:intergenic	25.0%
!	ATGTAGGAAGAAAAAGAATA+TGG	-	chr1.4:73147429-73147448	MS.gene60849:intron	25.0%
!	TAAAATTTCAAAAAGGTCCA+AGG	-	chr1.4:73147268-73147287	MS.gene60849:intron	25.0%
!	TCATACTTCATTGACATAAA+TGG	-	chr1.4:73146549-73146568	MS.gene60849:intron	25.0%
!	TCTGAAAATAAGGATTATGA+AGG	-	chr1.4:73145889-73145908	MS.gene60849:CDS	25.0%
!	TGTAGGAAGAAAAAGAATAT+GGG	-	chr1.4:73147430-73147449	MS.gene60849:intron	25.0%
!	TGTGTATATATCATGTTTCA+TGG	-	chr1.4:73145666-73145685	MS.gene60849:CDS	25.0%
!!	AATGCTTTGAATTTCCATTA+GGG	+	chr1.4:73145439-73145458	None:intergenic	25.0%
!!	ATATATGTATGTATTGGTGT+TGG	-	chr1.4:73146435-73146454	MS.gene60849:intron	25.0%
!!	GGAAGCATAAATAAATACTT+TGG	-	chr1.4:73147022-73147041	MS.gene60849:intron	25.0%
!!	TAATGGAAATTCAAAGCATT+GGG	-	chr1.4:73145439-73145458	MS.gene60849:CDS	25.0%
!!	TTTCATGGAAAACCAATTTT+GGG	-	chr1.4:73145681-73145700	MS.gene60849:CDS	25.0%
!!!	CAAATTTTGACCAAAATCAT+GGG	-	chr1.4:73145527-73145546	MS.gene60849:intron	25.0%
!!!	CAATTTTGAGTCTGAAAATA+AGG	-	chr1.4:73145879-73145898	MS.gene60849:CDS	25.0%
!!!	TCAAATTTTGACCAAAATCA+TGG	-	chr1.4:73145526-73145545	MS.gene60849:intron	25.0%
	AAATCATGGGAAAGTAAGTA+AGG	-	chr1.4:73145540-73145559	MS.gene60849:intron	30.0%
	AGTTATTTGTCTCTTGAACA+GGG	-	chr1.4:73147079-73147098	MS.gene60849:intron	30.0%
	ATACCACATAACTTATACCT+AGG	+	chr1.4:73145982-73146001	None:intergenic	30.0%
	ATTTATTGAATACACCACAG+AGG	-	chr1.4:73147298-73147317	MS.gene60849:CDS	30.0%
	CATATGTTCAGGTAGAAATT+TGG	-	chr1.4:73146801-73146820	MS.gene60849:intron	30.0%
	CTAATGGAAATTCAAAGCAT+TGG	-	chr1.4:73145438-73145457	MS.gene60849:CDS	30.0%
	TATTAGCAAAAAGTTCCCAA+AGG	+	chr1.4:73145946-73145965	None:intergenic	30.0%
	TGGTCAAAATTTGAGCATAA+TGG	+	chr1.4:73145520-73145539	None:intergenic	30.0%
	TTACATGCATGAAAGAAAGA+TGG	+	chr1.4:73147368-73147387	None:intergenic	30.0%
	TTACCTAGGTATAAGTTATG+TGG	-	chr1.4:73145976-73145995	MS.gene60849:intron	30.0%
	TTCAATAAATGCATAACCCT+TGG	+	chr1.4:73147288-73147307	None:intergenic	30.0%
	TTCACAACAAAACCCAAAAT+TGG	+	chr1.4:73145696-73145715	None:intergenic	30.0%
	TTGATAGAAACTAGTTCAGA+AGG	-	chr1.4:73146573-73146592	MS.gene60849:intron	30.0%
!	ACAAAGAAACTTTTTGTGAC+AGG	-	chr1.4:73146880-73146899	MS.gene60849:intron	30.0%
!	ACTTTTATCTCCTATTCATC+TGG	-	chr1.4:73146949-73146968	MS.gene60849:intron	30.0%
!	CAATGCTTTGAATTTCCATT+AGG	+	chr1.4:73145440-73145459	None:intergenic	30.0%
!	GTTTCATGGAAAACCAATTT+TGG	-	chr1.4:73145680-73145699	MS.gene60849:CDS	30.0%
!	TACTTACTTTCCCATGATTT+TGG	+	chr1.4:73145540-73145559	None:intergenic	30.0%
!	TTTATGACTACGAGGTTTTA+AGG	-	chr1.4:73146197-73146216	MS.gene60849:intron	30.0%
!!	TGATTTTAGTCCTTGTATCT+AGG	-	chr1.4:73146005-73146024	MS.gene60849:intron	30.0%
!!!	ATGTTTTGACAGAAACTACT+TGG	-	chr1.4:73146670-73146689	MS.gene60849:intron	30.0%
	ATGGTCAACAATTTGAGCTT+TGG	+	chr1.4:73145501-73145520	None:intergenic	35.0%
	ATTCACTGTTCTCTTGTAGA+AGG	-	chr1.4:73147183-73147202	MS.gene60849:intron	35.0%
	CAGTTATTTGTCTCTTGAAC+AGG	-	chr1.4:73147078-73147097	MS.gene60849:intron	35.0%
	GAAGTAGTGATGATCAATGA+AGG	-	chr1.4:73146226-73146245	MS.gene60849:intron	35.0%
	GTAAGAACATCCAGATGAAT+AGG	+	chr1.4:73146962-73146981	None:intergenic	35.0%
	GTTGTTTGTTTGCAGTGAAA+AGG	-	chr1.4:73145634-73145653	MS.gene60849:intron	35.0%
	TATTAATGGCTGGATGATAG+TGG	-	chr1.4:73147514-73147533	MS.gene60849:CDS	35.0%
	TCAGACTCAAAATTGTCATC+TGG	+	chr1.4:73145874-73145893	None:intergenic	35.0%
	TGTGTGAATTACTCTGTCAA+TGG	-	chr1.4:73147001-73147020	MS.gene60849:intron	35.0%
	TTGTGCGTGCAGATTATTAA+TGG	-	chr1.4:73147500-73147519	MS.gene60849:CDS	35.0%
	TTGTTGTGAACTTGTGATTG+TGG	-	chr1.4:73145817-73145836	MS.gene60849:intron	35.0%
!	AATGCAATTTTGCTTTGTGC+TGG	-	chr1.4:73147388-73147407	MS.gene60849:intron	35.0%
!	ATTCCACACATTTTTGCCTT+TGG	-	chr1.4:73145927-73145946	MS.gene60849:intron	35.0%
!	TTCCACACATTTTTGCCTTT+GGG	-	chr1.4:73145928-73145947	MS.gene60849:intron	35.0%
!!	AAAGCATTGGGTTGTTAGAA+TGG	-	chr1.4:73145451-73145470	MS.gene60849:CDS	35.0%
!!	AAATTCTTCTGAAGCAAGTC+AGG	-	chr1.4:73146843-73146862	MS.gene60849:intron	35.0%
!!	ACGACATAACATTGATTCTG+AGG	-	chr1.4:73146910-73146929	MS.gene60849:intron	35.0%
!!	GTTTTGTTGTGAACTTGATG+AGG	-	chr1.4:73145703-73145722	MS.gene60849:CDS	35.0%
!!	TGACTTGCTTCAGAAGAATT+TGG	+	chr1.4:73146844-73146863	None:intergenic	35.0%
	AAGTGTCAGAGATGTGTCTA+AGG	+	chr1.4:73146178-73146197	None:intergenic	40.0%
	ACTCAAAGAGATGAATGGCA+AGG	-	chr1.4:73147337-73147356	MS.gene60849:CDS	40.0%
	AGAATGGATAAACCTGCTGT+TGG	-	chr1.4:73145467-73145486	MS.gene60849:CDS	40.0%
	ATGAAGCACAGACTTTGACA+CGG	+	chr1.4:73146497-73146516	None:intergenic	40.0%
	CCTGAACATATGTAGTTAGC+AGG	+	chr1.4:73146793-73146812	None:intergenic	40.0%
	CCTGCTAACTACATATGTTC+AGG	-	chr1.4:73146790-73146809	MS.gene60849:intron	40.0%
	TATTGAATACACCACAGAGG+AGG	-	chr1.4:73147301-73147320	MS.gene60849:CDS	40.0%
	TTCCCAAAGGCAAAAATGTG+TGG	+	chr1.4:73145933-73145952	None:intergenic	40.0%
!	CTGACACTTTTATGACTACG+AGG	-	chr1.4:73146189-73146208	MS.gene60849:CDS	40.0%
!	GGAGAACATTTTTGCTTGCA+GGG	-	chr1.4:73147044-73147063	MS.gene60849:intron	40.0%
	ACCCCACCAAGATACAACAA+GGG	-	chr1.4:73147554-73147573	MS.gene60849:CDS	45.0%
	AGACACTTGTCTAACACGTG+TGG	+	chr1.4:73146114-73146133	None:intergenic	45.0%
	CTCACCAAAGCCTTCAAATG+CGG	+	chr1.4:73147139-73147158	None:intergenic	45.0%
	CTGCTTCGTGATTGTCATGT+AGG	-	chr1.4:73147413-73147432	MS.gene60849:intron	45.0%
	GCAGCACTCAAAGAGATGAA+TGG	-	chr1.4:73147332-73147351	MS.gene60849:CDS	45.0%
	GCGTGCAGATTATTAATGGC+TGG	-	chr1.4:73147504-73147523	MS.gene60849:CDS	45.0%
	TACCCCACCAAGATACAACA+AGG	-	chr1.4:73147553-73147572	MS.gene60849:CDS	45.0%
	TGAACTTGTGATTGTGGTGC+AGG	-	chr1.4:73145823-73145842	MS.gene60849:intron	45.0%
!	ACCCTTGTTGTATCTTGGTG+GGG	+	chr1.4:73147558-73147577	None:intergenic	45.0%
!	GACCCTTGTTGTATCTTGGT+GGG	+	chr1.4:73147559-73147578	None:intergenic	45.0%
!	GATTTTGCACATGAGCTAGC+TGG	-	chr1.4:73145725-73145744	MS.gene60849:CDS	45.0%
!	GGGAGAACATTTTTGCTTGC+AGG	-	chr1.4:73147043-73147062	MS.gene60849:intron	45.0%
!	TTGGTAACAACACCAACAGC+AGG	+	chr1.4:73145482-73145501	None:intergenic	45.0%
	CTTGTCTAACACGTGTGGCA+CGG	+	chr1.4:73146109-73146128	None:intergenic	50.0%
	GTATCTTGGTGGGGTAGTCT+TGG	+	chr1.4:73147549-73147568	None:intergenic	50.0%
	TTGTCTAACACGTGTGGCAC+GGG	+	chr1.4:73146108-73146127	None:intergenic	50.0%
!	CGACCCTTGTTGTATCTTGG+TGG	+	chr1.4:73147560-73147579	None:intergenic	50.0%
!	CTCTTTGAGTGCTGCACTTG+CGG	+	chr1.4:73147327-73147346	None:intergenic	50.0%
!	GCACGACCCTTGTTGTATCT+TGG	+	chr1.4:73147563-73147582	None:intergenic	50.0%
!!	GGCTTTGGTGAGCTTGTTGA+AGG	-	chr1.4:73147147-73147166	MS.gene60849:CDS	50.0%
	ACCTTACGCGCCGCATTTGA+AGG	-	chr1.4:73147126-73147145	MS.gene60849:CDS	55.0%
	CTCTGGCATTAAGCGTGTCC+CGG	-	chr1.4:73146073-73146092	MS.gene60849:intron	55.0%
	GGCTGAACAGACAAGACACC+AGG	+	chr1.4:73145853-73145872	None:intergenic	55.0%
!	ACGCTTAATGCCAGAGGCGT+CGG	+	chr1.4:73146069-73146088	None:intergenic	55.0%
	AACACGTGTGGCACGGGTGT+CGG	+	chr1.4:73146102-73146121	None:intergenic	60.0%
	CGCGCCGCATTTGAAGGCTT+TGG	-	chr1.4:73147132-73147151	MS.gene60849:CDS	60.0%
	CGGGACACGCTTAATGCCAG+AGG	+	chr1.4:73146075-73146094	None:intergenic	60.0%
	GATTGTGGTGCAGGTGTGCC+TGG	-	chr1.4:73145832-73145851	MS.gene60849:intron	60.0%
	GCCTTCAAATGCGGCGCGTA+AGG	+	chr1.4:73147130-73147149	None:intergenic	60.0%
	TGCACTTGCGGCCTCCTCTG+TGG	+	chr1.4:73147315-73147334	None:intergenic	65.0%
	TTGGTCAGCTCCGACGCCTC+TGG	-	chr1.4:73146056-73146075	MS.gene60849:intron	65.0%
!!	GTGGCACGGGTGTCGGTCAC+CGG	+	chr1.4:73146095-73146114	None:intergenic	70.0%
!!	TGGCACGGGTGTCGGTCACC+GGG	+	chr1.4:73146094-73146113	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	73145425	73147598	73145425	ID=MS.gene60849
chr1.4	mRNA	73145425	73147598	73145425	ID=MS.gene60849.t1;Parent=MS.gene60849
chr1.4	exon	73147471	73147598	73147471	ID=MS.gene60849.t1.exon1;Parent=MS.gene60849.t1
chr1.4	CDS	73147471	73147598	73147471	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73147277	73147374	73147277	ID=MS.gene60849.t1.exon2;Parent=MS.gene60849.t1
chr1.4	CDS	73147277	73147374	73147277	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73147113	73147178	73147113	ID=MS.gene60849.t1.exon3;Parent=MS.gene60849.t1
chr1.4	CDS	73147113	73147178	73147113	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73146122	73146211	73146122	ID=MS.gene60849.t1.exon4;Parent=MS.gene60849.t1
chr1.4	CDS	73146122	73146211	73146122	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73145855	73145923	73145855	ID=MS.gene60849.t1.exon5;Parent=MS.gene60849.t1
chr1.4	CDS	73145855	73145923	73145855	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73145665	73145771	73145665	ID=MS.gene60849.t1.exon6;Parent=MS.gene60849.t1
chr1.4	CDS	73145665	73145771	73145665	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1
chr1.4	exon	73145425	73145511	73145425	ID=MS.gene60849.t1.exon7;Parent=MS.gene60849.t1
chr1.4	CDS	73145425	73145511	73145425	ID=cds.MS.gene60849.t1;Parent=MS.gene60849.t1

Gene Sequence

>MS.gene60849

ATGTTGTTGTTCCCTAATGGAAATTCAAAGCATTGGGTTGTTAGAATGGATAAACCTGCTGTTGGTGTTGTTACCAAAGCTCAAATTGTTGACCATTATGCTCAAATTTTGACCAAAATCATGGGAAAGTAAGTAAGGACATTCAAATCTACTTTTTTTTTCTTTCTTTTTTATTGGGTTTCTTGTTTTCTTTGAAATTTGATGACAATGTTGTTTGTTTGCAGTGAAAAGGATGCACAAATGTGTATATATCATGTTTCATGGAAAACCAATTTTGGGTTTTGTTGTGAACTTGATGAGGATTTTGCACATGAGCTAGCTGGTTAGCTTTGTAGATTCTTAACCTTTGTTTCAAAGTTTGAATTAAACATGTTTAATGAAATTTGAAATGCTTGTTGTGAACTTGTGATTGTGGTGCAGGTGTGCCTGGTGTCTTGTCTGTTCAGCCAGATGACAATTTTGAGTCTGAAAATAAGGATTATGAAGGTTTGCCGTTTTGTAAATTCCACACATTTTTGCCTTTGGGAACTTTTTGCTAATATATTATAAATTTACCTAGGTATAAGTTATGTGGTATGTGTGATTTTAGTCCTTGTATCTAGGATGATATTTTGTGTTAATTTATATTTCATTGGTCAGCTCCGACGCCTCTGGCATTAAGCGTGTCCCGGTGACCGACACCCGTGCCACACGTGTTAGACAAGTGTCTCAAAATAAACTTTTTCTTTTCTTTTGACACACTTTTACACTCCTTAGACACATCTCTGACACTTTTATGACTACGAGGTTTTAAGGTATGTCGAAGTAGTGATGATCAATGAAGGAGTTGTAGACATTAAATTCGATTACGTCATTTTTAACTTTTTAGTATAGTAGATTGATGAATGAGTAGAAAAATTATCATATTTTGTTTACGAACATTTTTGCATTGTGCCAATTGATTGCTCAATTTAGATCTTTTACAGATAATGTTCAAATTTTATTTAATTATAATAAATAAATAAATAAATATATATGTATGTATTGGTGTTGGTGTCCTGTATTTTTAAAATTAGCAGTGTCGACGTGTCCGTGTCAAAGTCTGTGCTTCATTCAGCTCTTTACAGTTTTTATTATTTTGTAGTTCATACTTCATTGACATAAATGGTTTGATAGAAACTAGTTCAGAAGGAGAAAACTATATTAAAGTAGCAATCTACTGTAATATAACATTTATCTTATATTAAAGTAGAAGCTAGTTCGCAAATGTTTTGACAGAAACTACTTGGTATGCATTTTCAATGATGATATGATTCTCACAGACATTGAATTATGCTTGTTCATGATTTTCTACTTTCTGCTGTTAGTAACTTTTTTCTTTGATTTCCTGCTAACTACATATGTTCAGGTAGAAATTTGGAAAATAGTCTGAATATGCCAAATTCTTCTGAAGCAAGTCAGGAAGCTTCTGTGAAAACAAAGAAACTTTTTGTGACAGGTATTCTCACGACATAACATTGATTCTGAGGTGTAGAGCATGTTTTAACTTTTATCTCCTATTCATCTGGATGTTCTTACGACTATGTAACTAAAATTGTGTGTGAATTACTCTGTCAATGGAAGCATAAATAAATACTTTGGGAGAACATTTTTGCTTGCAGGGCTATCATTTGACAGTTATTTGTCTCTTGAACAGGGCTATCATTTTATACATCTGAGAAAACCTTACGCGCCGCATTTGAAGGCTTTGGTGAGCTTGTTGAAGGTAGTTTCAACTTCATTCACTGTTCTCTTGTAGAAGGCTTCTGTCTGCGCTTTTACTAATAAATAAATGGTTATGTTTGACAGTTAAAGTTATTATAGATAAAATTTCAAAAAGGTCCAAGGGTTATGCATTTATTGAATACACCACAGAGGAGGCCGCAAGTGCAGCACTCAAAGAGATGAATGGCAAGGTAGATCCATCTTTCTTTCATGCATGTAAAATGCAATTTTGCTTTGTGCTGGTTCTGCTTCGTGATTGTCATGTAGGAAGAAAAAGAATATGGGTTTATAAATCATAATAGAAAGAAGTTTGGTAGTCGTTAACGATTTTATTGTGCGTGCAGATTATTAATGGCTGGATGATAGTGGTAGATGTTGCCAAGACTACCCCACCAAGATACAACAAGGGTCGTGCCAGACCATCTGCTTGA

Protein sequence

>MS.gene60849.t1

MLLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWKTNFGFCCELDEDFAHELAGVPGVLSVQPDDNFESENKDYEGRNLENSLNMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPPRYNKGRARPSA