Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35589.t1 | XP_013460901.1 | 85 | 347 | 9 | 2 | 1 | 305 | 1 | 346 | 4.60E-162 | 580.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35589.t1 | Q9S9Z2 | 38.2 | 377 | 149 | 10 | 1 | 305 | 1 | 365 | 5.7e-52 | 206.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35589.t1 | A0A072V9U0 | 85.0 | 347 | 9 | 2 | 1 | 305 | 1 | 346 | 3.3e-162 | 580.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene35589.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050082 | MS.gene35589 | 0.810417 | 1.16E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene35589 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene35589 | 0.834066 | 3.72E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene35589 | 0.819156 | 1.35E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene35589 | 0.825079 | 5.70E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene35589 | 0.811692 | 6.17E-51 | -1.69E-46 |
| MS.gene056697 | MS.gene35589 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene35589 | 0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene35589 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene057717 | MS.gene35589 | 0.806969 | 6.36E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene35589 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene35589 | 0.821956 | 3.06E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene35589 | 0.813295 | 2.75E-51 | -1.69E-46 |
| MS.gene059685 | MS.gene35589 | 0.804275 | 2.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35589 | MS.gene024798 | PPI |
| MS.gene35589 | MS.gene024799 | PPI |
| MS.gene35589 | MS.gene60976 | PPI |
| MS.gene35589 | MS.gene21778 | PPI |
| MS.gene35589 | MS.gene055461 | PPI |
| MS.gene35589 | MS.gene070372 | PPI |
| MS.gene35589 | MS.gene94966 | PPI |
| MS.gene35589 | MS.gene058089 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35589.t1 | MTR_3g074520 | 85.014 | 347 | 9 | 2 | 1 | 305 | 1 | 346 | 0.0 | 528 |
| MS.gene35589.t1 | MTR_4g478180 | 49.746 | 197 | 45 | 6 | 1 | 152 | 2 | 189 | 1.24e-50 | 171 |
| MS.gene35589.t1 | MTR_5g007370 | 51.572 | 159 | 31 | 3 | 1 | 113 | 1 | 159 | 3.15e-44 | 153 |
| MS.gene35589.t1 | MTR_5g029840 | 41.872 | 203 | 63 | 4 | 1 | 158 | 1 | 193 | 1.03e-42 | 150 |
| MS.gene35589.t1 | MTR_6g012690 | 51.880 | 133 | 22 | 1 | 1 | 91 | 1 | 133 | 1.17e-40 | 145 |
| MS.gene35589.t1 | MTR_7g011170 | 39.665 | 179 | 60 | 2 | 1 | 137 | 1 | 173 | 1.84e-38 | 138 |
| MS.gene35589.t1 | MTR_7g076740 | 33.213 | 277 | 120 | 5 | 1 | 227 | 1 | 262 | 1.13e-37 | 135 |
| MS.gene35589.t1 | MTR_4g091490 | 47.015 | 134 | 28 | 2 | 1 | 91 | 1 | 134 | 1.65e-37 | 137 |
| MS.gene35589.t1 | MTR_2g011660 | 48.462 | 130 | 24 | 2 | 1 | 87 | 1 | 130 | 2.98e-37 | 135 |
| MS.gene35589.t1 | MTR_4g082290 | 40.860 | 186 | 59 | 3 | 1 | 141 | 1 | 180 | 1.77e-36 | 135 |
| MS.gene35589.t1 | MTR_2g089620 | 47.328 | 131 | 27 | 1 | 1 | 89 | 1 | 131 | 7.19e-35 | 129 |
| MS.gene35589.t1 | MTR_4g082230 | 39.785 | 186 | 61 | 3 | 1 | 141 | 1 | 180 | 7.71e-35 | 130 |
| MS.gene35589.t1 | MTR_5g078140 | 49.219 | 128 | 23 | 1 | 1 | 86 | 1 | 128 | 6.87e-34 | 126 |
| MS.gene35589.t1 | MTR_8g031360 | 49.231 | 130 | 22 | 3 | 1 | 86 | 1 | 130 | 2.69e-33 | 124 |
| MS.gene35589.t1 | MTR_4g102380 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 7.77e-33 | 122 |
| MS.gene35589.t1 | MTR_3g065440 | 48.031 | 127 | 24 | 1 | 1 | 85 | 1 | 127 | 2.65e-32 | 122 |
| MS.gene35589.t1 | MTR_3g461490 | 35.678 | 199 | 74 | 2 | 1 | 157 | 1 | 187 | 8.80e-32 | 120 |
| MS.gene35589.t1 | MTR_6g009430 | 37.419 | 155 | 51 | 2 | 1 | 109 | 1 | 155 | 9.08e-32 | 121 |
| MS.gene35589.t1 | MTR_4g073420 | 42.188 | 128 | 32 | 1 | 1 | 86 | 1 | 128 | 7.34e-30 | 114 |
| MS.gene35589.t1 | MTR_3g097450 | 41.985 | 131 | 34 | 1 | 1 | 89 | 1 | 131 | 3.91e-29 | 113 |
| MS.gene35589.t1 | MTR_8g095390 | 42.424 | 132 | 34 | 1 | 1 | 90 | 1 | 132 | 4.22e-29 | 113 |
| MS.gene35589.t1 | MTR_1g100653 | 44.915 | 118 | 23 | 1 | 1 | 76 | 1 | 118 | 1.62e-28 | 111 |
| MS.gene35589.t1 | MTR_1g076150 | 47.458 | 118 | 20 | 1 | 1 | 76 | 1 | 118 | 2.52e-28 | 110 |
| MS.gene35589.t1 | MTR_3g083540 | 44.355 | 124 | 27 | 1 | 5 | 86 | 34 | 157 | 3.76e-28 | 110 |
| MS.gene35589.t1 | MTR_7g115650 | 44.828 | 116 | 22 | 1 | 1 | 74 | 1 | 116 | 4.32e-28 | 108 |
| MS.gene35589.t1 | MTR_1g085040 | 41.667 | 132 | 35 | 1 | 1 | 90 | 1 | 132 | 1.08e-27 | 110 |
| MS.gene35589.t1 | MTR_7g110830 | 41.667 | 132 | 35 | 1 | 1 | 90 | 1 | 132 | 1.65e-27 | 110 |
| MS.gene35589.t1 | MTR_1g085640 | 40.909 | 132 | 36 | 1 | 1 | 90 | 1 | 132 | 2.71e-27 | 110 |
| MS.gene35589.t1 | MTR_7g096930 | 45.763 | 118 | 22 | 1 | 1 | 76 | 1 | 118 | 7.45e-27 | 106 |
| MS.gene35589.t1 | MTR_4g121460 | 44.828 | 116 | 22 | 1 | 1 | 74 | 1 | 116 | 8.78e-27 | 107 |
| MS.gene35589.t1 | MTR_7g010210 | 45.690 | 116 | 21 | 1 | 1 | 74 | 1 | 116 | 1.00e-26 | 107 |
| MS.gene35589.t1 | MTR_7g010210 | 45.690 | 116 | 21 | 1 | 1 | 74 | 1 | 116 | 1.02e-26 | 106 |
| MS.gene35589.t1 | MTR_5g079670 | 38.400 | 125 | 35 | 1 | 3 | 85 | 2 | 126 | 1.29e-26 | 104 |
| MS.gene35589.t1 | MTR_4g105130 | 41.221 | 131 | 35 | 1 | 1 | 89 | 1 | 131 | 2.52e-26 | 107 |
| MS.gene35589.t1 | MTR_1g043080 | 45.299 | 117 | 22 | 1 | 1 | 75 | 1 | 117 | 3.03e-26 | 104 |
| MS.gene35589.t1 | MTR_1g043050 | 45.299 | 117 | 22 | 1 | 1 | 75 | 1 | 117 | 3.09e-26 | 104 |
| MS.gene35589.t1 | MTR_2g034790 | 40.000 | 135 | 39 | 1 | 1 | 93 | 1 | 135 | 4.17e-26 | 105 |
| MS.gene35589.t1 | MTR_4g057635 | 40.769 | 130 | 34 | 2 | 1 | 87 | 1 | 130 | 3.21e-25 | 103 |
| MS.gene35589.t1 | MTR_5g014990 | 33.040 | 227 | 85 | 8 | 1 | 180 | 1 | 207 | 4.59e-25 | 102 |
| MS.gene35589.t1 | MTR_7g087130 | 42.400 | 125 | 28 | 2 | 1 | 81 | 1 | 125 | 8.82e-25 | 102 |
| MS.gene35589.t1 | MTR_7g117730 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 1.12e-24 | 100 |
| MS.gene35589.t1 | MTR_0140s0030 | 43.103 | 116 | 24 | 1 | 1 | 74 | 2 | 117 | 1.28e-24 | 101 |
| MS.gene35589.t1 | MTR_0489s0020 | 43.103 | 116 | 24 | 1 | 1 | 74 | 2 | 117 | 1.28e-24 | 101 |
| MS.gene35589.t1 | MTR_3g077110 | 38.235 | 136 | 42 | 1 | 1 | 94 | 1 | 136 | 1.70e-24 | 101 |
| MS.gene35589.t1 | MTR_2g064160 | 40.496 | 121 | 30 | 1 | 6 | 84 | 5 | 125 | 1.89e-24 | 100 |
| MS.gene35589.t1 | MTR_7g102110 | 41.667 | 120 | 27 | 2 | 1 | 77 | 1 | 120 | 3.69e-24 | 99.4 |
| MS.gene35589.t1 | MTR_3g039990 | 41.176 | 119 | 28 | 1 | 1 | 77 | 2 | 120 | 3.84e-24 | 100 |
| MS.gene35589.t1 | MTR_7g109320 | 42.241 | 116 | 25 | 1 | 1 | 74 | 1 | 116 | 3.87e-24 | 100 |
| MS.gene35589.t1 | MTR_7g111290 | 43.511 | 131 | 32 | 1 | 1 | 89 | 1 | 131 | 1.07e-23 | 100 |
| MS.gene35589.t1 | MTR_2g099740 | 33.133 | 166 | 59 | 3 | 1 | 117 | 1 | 163 | 1.28e-23 | 100 |
| MS.gene35589.t1 | MTR_1g017140 | 43.220 | 118 | 24 | 2 | 1 | 75 | 1 | 118 | 2.19e-23 | 98.6 |
| MS.gene35589.t1 | MTR_5g042030 | 40.833 | 120 | 29 | 1 | 11 | 88 | 6 | 125 | 2.26e-23 | 97.4 |
| MS.gene35589.t1 | MTR_3g103570 | 38.971 | 136 | 40 | 2 | 1 | 93 | 1 | 136 | 3.46e-23 | 98.2 |
| MS.gene35589.t1 | MTR_8g027345 | 42.241 | 116 | 25 | 1 | 1 | 74 | 1 | 116 | 3.86e-23 | 97.1 |
| MS.gene35589.t1 | MTR_1g112760 | 39.683 | 126 | 34 | 1 | 3 | 86 | 4 | 129 | 6.53e-23 | 95.1 |
| MS.gene35589.t1 | MTR_1g017000 | 36.735 | 147 | 46 | 4 | 1 | 102 | 1 | 145 | 7.03e-23 | 95.5 |
| MS.gene35589.t1 | MTR_2g067420 | 41.818 | 110 | 22 | 1 | 2 | 69 | 4 | 113 | 5.45e-22 | 94.4 |
| MS.gene35589.t1 | MTR_8g017440 | 32.515 | 163 | 59 | 3 | 1 | 112 | 1 | 163 | 5.81e-22 | 94.7 |
| MS.gene35589.t1 | MTR_4g125520 | 40.336 | 119 | 29 | 1 | 1 | 77 | 1 | 119 | 1.26e-21 | 93.2 |
| MS.gene35589.t1 | MTR_8g017540 | 37.607 | 117 | 31 | 1 | 1 | 75 | 47 | 163 | 2.24e-21 | 93.6 |
| MS.gene35589.t1 | MTR_2g089450 | 37.288 | 118 | 32 | 1 | 1 | 76 | 1 | 118 | 3.43e-21 | 90.9 |
| MS.gene35589.t1 | MTR_4g485530 | 38.400 | 125 | 34 | 2 | 3 | 84 | 2 | 126 | 4.15e-21 | 89.4 |
| MS.gene35589.t1 | MTR_2g095520 | 41.441 | 111 | 22 | 2 | 1 | 68 | 1 | 111 | 7.30e-21 | 91.3 |
| MS.gene35589.t1 | MTR_6g012180 | 40.541 | 111 | 24 | 1 | 1 | 69 | 1 | 111 | 7.48e-21 | 91.3 |
| MS.gene35589.t1 | MTR_4g097570 | 41.818 | 110 | 21 | 2 | 1 | 67 | 1 | 110 | 6.62e-20 | 88.2 |
| MS.gene35589.t1 | MTR_0008s0280 | 37.719 | 114 | 29 | 1 | 1 | 72 | 1 | 114 | 1.03e-19 | 86.3 |
| MS.gene35589.t1 | MTR_8g017500 | 36.207 | 116 | 32 | 1 | 1 | 74 | 1 | 116 | 1.47e-19 | 87.8 |
| MS.gene35589.t1 | MTR_0008s0470 | 38.136 | 118 | 30 | 2 | 1 | 75 | 1 | 118 | 1.52e-19 | 87.0 |
| MS.gene35589.t1 | MTR_6g090405 | 38.983 | 118 | 29 | 2 | 1 | 75 | 1 | 118 | 3.79e-19 | 85.1 |
| MS.gene35589.t1 | MTR_4g097570 | 41.441 | 111 | 21 | 3 | 1 | 67 | 1 | 111 | 5.49e-19 | 85.5 |
| MS.gene35589.t1 | MTR_8g098860 | 36.207 | 116 | 32 | 1 | 1 | 74 | 1 | 116 | 6.75e-19 | 85.9 |
| MS.gene35589.t1 | MTR_0063s0090 | 38.053 | 113 | 28 | 1 | 1 | 71 | 1 | 113 | 2.98e-18 | 82.0 |
| MS.gene35589.t1 | MTR_4g128670 | 38.739 | 111 | 25 | 2 | 1 | 68 | 1 | 111 | 2.04e-17 | 82.0 |
| MS.gene35589.t1 | MTR_3g045430 | 34.328 | 134 | 45 | 2 | 1 | 91 | 1 | 134 | 5.66e-17 | 80.1 |
| MS.gene35589.t1 | MTR_5g007310 | 39.695 | 131 | 57 | 4 | 56 | 181 | 6 | 119 | 3.40e-16 | 76.6 |
| MS.gene35589.t1 | MTR_6g006030 | 35.537 | 121 | 34 | 2 | 1 | 77 | 1 | 121 | 3.43e-15 | 73.6 |
| MS.gene35589.t1 | MTR_1g100667 | 36.792 | 106 | 25 | 1 | 13 | 76 | 14 | 119 | 5.28e-15 | 73.9 |
| MS.gene35589.t1 | MTR_3g028740 | 36.697 | 109 | 27 | 1 | 8 | 74 | 18 | 126 | 8.57e-14 | 71.2 |
| MS.gene35589.t1 | MTR_4g065017 | 34.234 | 111 | 31 | 1 | 12 | 80 | 17 | 127 | 1.23e-13 | 70.9 |
| MS.gene35589.t1 | MTR_5g007300 | 63.043 | 46 | 17 | 0 | 1 | 46 | 53 | 98 | 1.73e-13 | 67.0 |
| MS.gene35589.t1 | MTR_1g062940 | 33.636 | 110 | 30 | 2 | 12 | 78 | 6 | 115 | 2.88e-12 | 65.5 |
| MS.gene35589.t1 | MTR_8g017480 | 50.000 | 46 | 23 | 0 | 1 | 46 | 1 | 46 | 3.09e-12 | 60.8 |
| MS.gene35589.t1 | MTR_2g096380 | 33.654 | 104 | 27 | 1 | 12 | 73 | 6 | 109 | 2.33e-11 | 63.2 |
| MS.gene35589.t1 | MTR_4g063100 | 33.019 | 106 | 29 | 1 | 13 | 76 | 8 | 113 | 4.25e-11 | 62.4 |
| MS.gene35589.t1 | MTR_8g020490 | 34.483 | 116 | 30 | 2 | 1 | 74 | 1 | 112 | 7.03e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35589.t1 | AT1G34670 | 40.470 | 383 | 132 | 13 | 1 | 305 | 1 | 365 | 3.26e-69 | 219 |
| MS.gene35589.t1 | AT5G10280 | 39.071 | 366 | 128 | 12 | 1 | 304 | 1 | 333 | 8.59e-62 | 199 |
| MS.gene35589.t1 | AT5G16770 | 43.961 | 207 | 58 | 3 | 1 | 162 | 1 | 194 | 2.53e-50 | 169 |
| MS.gene35589.t1 | AT5G16770 | 43.961 | 207 | 58 | 3 | 1 | 162 | 1 | 194 | 2.53e-50 | 169 |
| MS.gene35589.t1 | AT5G16770 | 43.961 | 207 | 58 | 3 | 1 | 162 | 1 | 194 | 5.76e-50 | 169 |
| MS.gene35589.t1 | AT5G16770 | 43.961 | 207 | 58 | 3 | 1 | 162 | 1 | 194 | 5.76e-50 | 169 |
| MS.gene35589.t1 | AT5G65230 | 51.323 | 189 | 43 | 4 | 1 | 146 | 1 | 183 | 2.75e-47 | 161 |
| MS.gene35589.t1 | AT3G02940 | 58.015 | 131 | 13 | 1 | 1 | 89 | 1 | 131 | 7.32e-47 | 160 |
| MS.gene35589.t1 | AT3G02940 | 38.636 | 264 | 98 | 6 | 1 | 214 | 1 | 250 | 1.26e-46 | 160 |
| MS.gene35589.t1 | AT3G02940 | 38.636 | 264 | 98 | 6 | 1 | 214 | 1 | 250 | 1.26e-46 | 160 |
| MS.gene35589.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 2.07e-42 | 146 |
| MS.gene35589.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 2.84e-42 | 148 |
| MS.gene35589.t1 | AT5G15310 | 44.199 | 181 | 52 | 4 | 1 | 137 | 1 | 176 | 2.98e-42 | 148 |
| MS.gene35589.t1 | AT4G21440 | 46.429 | 168 | 33 | 4 | 1 | 112 | 1 | 167 | 4.36e-41 | 146 |
| MS.gene35589.t1 | AT3G01140 | 51.111 | 135 | 24 | 1 | 1 | 93 | 1 | 135 | 5.53e-41 | 145 |
| MS.gene35589.t1 | AT3G61250 | 51.562 | 128 | 20 | 1 | 1 | 86 | 1 | 128 | 6.78e-39 | 139 |
| MS.gene35589.t1 | AT3G01140 | 50.000 | 132 | 24 | 1 | 4 | 93 | 47 | 178 | 5.16e-38 | 139 |
| MS.gene35589.t1 | AT4G17785 | 48.905 | 137 | 27 | 2 | 1 | 94 | 1 | 137 | 7.44e-38 | 137 |
| MS.gene35589.t1 | AT4G17785 | 48.905 | 137 | 27 | 2 | 1 | 94 | 1 | 137 | 8.82e-38 | 137 |
| MS.gene35589.t1 | AT4G05100 | 49.231 | 130 | 23 | 2 | 1 | 87 | 1 | 130 | 4.51e-37 | 135 |
| MS.gene35589.t1 | AT4G28110 | 48.062 | 129 | 25 | 1 | 1 | 87 | 1 | 129 | 5.24e-36 | 131 |
| MS.gene35589.t1 | AT4G22680 | 50.000 | 128 | 22 | 1 | 1 | 86 | 1 | 128 | 7.31e-35 | 127 |
| MS.gene35589.t1 | AT5G16600 | 49.219 | 128 | 23 | 1 | 1 | 86 | 1 | 128 | 5.88e-34 | 127 |
| MS.gene35589.t1 | AT1G66230 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 1.99e-33 | 124 |
| MS.gene35589.t1 | AT5G54230 | 47.482 | 139 | 31 | 1 | 1 | 97 | 1 | 139 | 1.56e-32 | 122 |
| MS.gene35589.t1 | AT4G12350 | 47.656 | 128 | 25 | 1 | 1 | 86 | 1 | 128 | 1.47e-31 | 119 |
| MS.gene35589.t1 | AT1G35515 | 41.611 | 149 | 33 | 3 | 1 | 95 | 1 | 149 | 2.65e-31 | 116 |
| MS.gene35589.t1 | AT5G60890 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 2.75e-31 | 119 |
| MS.gene35589.t1 | AT5G61420 | 43.750 | 128 | 30 | 1 | 1 | 86 | 1 | 128 | 1.48e-30 | 118 |
| MS.gene35589.t1 | AT4G34990 | 43.750 | 128 | 30 | 1 | 1 | 86 | 1 | 128 | 1.51e-30 | 116 |
| MS.gene35589.t1 | AT1G18570 | 46.094 | 128 | 26 | 2 | 1 | 85 | 1 | 128 | 1.53e-30 | 118 |
| MS.gene35589.t1 | AT5G07690 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 2.15e-30 | 117 |
| MS.gene35589.t1 | AT4G09460 | 44.094 | 127 | 29 | 1 | 1 | 85 | 1 | 127 | 2.37e-30 | 115 |
| MS.gene35589.t1 | AT4G38620 | 42.969 | 128 | 31 | 1 | 1 | 86 | 1 | 128 | 6.72e-30 | 115 |
| MS.gene35589.t1 | AT2G16720 | 42.520 | 127 | 31 | 1 | 1 | 85 | 1 | 127 | 7.41e-30 | 114 |
| MS.gene35589.t1 | AT1G22640 | 42.520 | 127 | 31 | 1 | 1 | 85 | 1 | 127 | 1.45e-29 | 113 |
| MS.gene35589.t1 | AT5G26660 | 44.531 | 128 | 29 | 1 | 1 | 86 | 1 | 128 | 2.83e-29 | 114 |
| MS.gene35589.t1 | AT5G56110 | 36.571 | 175 | 57 | 2 | 1 | 133 | 1 | 163 | 8.27e-29 | 112 |
| MS.gene35589.t1 | AT1G74080 | 42.748 | 131 | 33 | 1 | 1 | 89 | 1 | 131 | 1.12e-28 | 112 |
| MS.gene35589.t1 | AT5G62320 | 42.857 | 133 | 27 | 2 | 2 | 85 | 3 | 135 | 1.52e-28 | 110 |
| MS.gene35589.t1 | AT5G07700 | 38.323 | 167 | 52 | 3 | 1 | 125 | 1 | 158 | 2.07e-28 | 112 |
| MS.gene35589.t1 | AT5G07700 | 38.323 | 167 | 52 | 3 | 1 | 125 | 1 | 158 | 2.07e-28 | 112 |
| MS.gene35589.t1 | AT3G13540 | 42.400 | 125 | 30 | 1 | 4 | 86 | 15 | 139 | 2.75e-28 | 109 |
| MS.gene35589.t1 | AT1G09540 | 35.593 | 177 | 65 | 2 | 1 | 135 | 1 | 170 | 3.60e-28 | 112 |
| MS.gene35589.t1 | AT3G23250 | 48.276 | 116 | 18 | 1 | 1 | 74 | 1 | 116 | 4.43e-28 | 110 |
| MS.gene35589.t1 | AT1G57560 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 1.16e-27 | 109 |
| MS.gene35589.t1 | AT2G31180 | 34.637 | 179 | 64 | 2 | 1 | 126 | 1 | 179 | 1.17e-27 | 108 |
| MS.gene35589.t1 | AT5G14340 | 41.353 | 133 | 36 | 1 | 1 | 91 | 13 | 145 | 1.41e-27 | 108 |
| MS.gene35589.t1 | AT1G57560 | 40.458 | 131 | 36 | 1 | 1 | 89 | 1 | 131 | 2.17e-27 | 108 |
| MS.gene35589.t1 | AT1G06180 | 46.552 | 116 | 20 | 1 | 1 | 74 | 1 | 116 | 1.04e-26 | 105 |
| MS.gene35589.t1 | AT1G74650 | 40.876 | 137 | 38 | 2 | 1 | 94 | 1 | 137 | 1.10e-26 | 107 |
| MS.gene35589.t1 | AT3G47600 | 44.538 | 119 | 24 | 1 | 1 | 77 | 1 | 119 | 1.99e-26 | 106 |
| MS.gene35589.t1 | AT1G56160 | 44.348 | 115 | 22 | 1 | 2 | 74 | 4 | 118 | 1.26e-25 | 103 |
| MS.gene35589.t1 | AT5G49330 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 1.70e-25 | 104 |
| MS.gene35589.t1 | AT4G01680 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 2.35e-25 | 102 |
| MS.gene35589.t1 | AT5G62470 | 43.220 | 118 | 26 | 1 | 1 | 77 | 1 | 118 | 2.93e-25 | 103 |
| MS.gene35589.t1 | AT1G08810 | 43.966 | 116 | 23 | 1 | 1 | 74 | 1 | 116 | 3.06e-25 | 102 |
| MS.gene35589.t1 | AT5G62470 | 42.857 | 119 | 26 | 1 | 1 | 77 | 1 | 119 | 4.40e-25 | 103 |
| MS.gene35589.t1 | AT3G28910 | 43.443 | 122 | 27 | 1 | 1 | 80 | 1 | 122 | 5.72e-25 | 102 |
| MS.gene35589.t1 | AT1G79180 | 42.735 | 117 | 25 | 1 | 2 | 76 | 4 | 120 | 6.79e-25 | 101 |
| MS.gene35589.t1 | AT4G01680 | 40.152 | 132 | 37 | 1 | 1 | 90 | 1 | 132 | 8.19e-25 | 102 |
| MS.gene35589.t1 | AT1G74430 | 40.769 | 130 | 35 | 1 | 1 | 88 | 1 | 130 | 2.25e-24 | 100 |
| MS.gene35589.t1 | AT3G62610 | 43.103 | 116 | 24 | 1 | 1 | 74 | 1 | 116 | 4.92e-24 | 100 |
| MS.gene35589.t1 | AT3G12720 | 40.496 | 121 | 30 | 1 | 6 | 84 | 16 | 136 | 5.61e-24 | 99.8 |
| MS.gene35589.t1 | AT2G47460 | 40.000 | 135 | 39 | 1 | 1 | 93 | 1 | 135 | 6.35e-24 | 100 |
| MS.gene35589.t1 | AT5G23000 | 39.831 | 118 | 28 | 2 | 1 | 75 | 1 | 118 | 8.51e-23 | 96.7 |
| MS.gene35589.t1 | AT3G28470 | 41.045 | 134 | 37 | 1 | 1 | 92 | 1 | 134 | 1.35e-22 | 95.9 |
| MS.gene35589.t1 | AT2G36890 | 42.373 | 118 | 25 | 2 | 1 | 75 | 1 | 118 | 1.61e-22 | 95.5 |
| MS.gene35589.t1 | AT2G36890 | 42.373 | 118 | 25 | 2 | 1 | 75 | 42 | 159 | 2.12e-22 | 95.9 |
| MS.gene35589.t1 | AT3G12820 | 40.517 | 116 | 27 | 1 | 3 | 76 | 5 | 120 | 2.25e-22 | 94.0 |
| MS.gene35589.t1 | AT1G16490 | 40.870 | 115 | 26 | 1 | 2 | 74 | 4 | 118 | 2.32e-22 | 94.7 |
| MS.gene35589.t1 | AT5G57620 | 41.525 | 118 | 26 | 2 | 1 | 75 | 1 | 118 | 5.50e-22 | 94.7 |
| MS.gene35589.t1 | AT3G49690 | 42.373 | 118 | 25 | 2 | 1 | 75 | 1 | 118 | 6.42e-22 | 94.0 |
| MS.gene35589.t1 | AT5G65790 | 41.525 | 118 | 26 | 2 | 1 | 75 | 1 | 118 | 6.67e-22 | 94.7 |
| MS.gene35589.t1 | AT1G18710 | 39.062 | 128 | 36 | 1 | 1 | 86 | 1 | 128 | 1.30e-21 | 92.4 |
| MS.gene35589.t1 | AT3G13890 | 37.607 | 117 | 31 | 1 | 1 | 75 | 1 | 117 | 1.10e-20 | 91.3 |
| MS.gene35589.t1 | AT4G37780 | 38.983 | 118 | 29 | 2 | 1 | 75 | 1 | 118 | 2.36e-20 | 89.7 |
| MS.gene35589.t1 | AT1G63910 | 34.328 | 134 | 46 | 1 | 1 | 92 | 1 | 134 | 3.56e-20 | 90.1 |
| MS.gene35589.t1 | AT5G15310 | 46.809 | 94 | 43 | 3 | 47 | 138 | 10 | 98 | 3.33e-19 | 85.5 |
| MS.gene35589.t1 | AT3G13890 | 34.127 | 126 | 32 | 1 | 1 | 75 | 1 | 126 | 1.09e-18 | 85.9 |
| MS.gene35589.t1 | AT4G28110 | 70.732 | 41 | 12 | 0 | 47 | 87 | 5 | 45 | 8.35e-16 | 74.7 |
| MS.gene35589.t1 | AT5G40350 | 36.607 | 112 | 29 | 1 | 9 | 78 | 14 | 125 | 1.11e-15 | 75.1 |
| MS.gene35589.t1 | AT5G61420 | 72.500 | 40 | 11 | 0 | 47 | 86 | 10 | 49 | 2.17e-15 | 75.5 |
| MS.gene35589.t1 | AT1G22640 | 48.649 | 74 | 27 | 2 | 12 | 85 | 8 | 70 | 3.21e-15 | 73.2 |
| MS.gene35589.t1 | AT5G52260 | 33.099 | 142 | 48 | 3 | 13 | 109 | 13 | 152 | 5.64e-15 | 73.9 |
| MS.gene35589.t1 | AT5G26660 | 49.333 | 75 | 27 | 2 | 12 | 86 | 34 | 97 | 8.55e-15 | 73.9 |
| MS.gene35589.t1 | AT5G14750 | 34.559 | 136 | 39 | 4 | 13 | 105 | 17 | 145 | 3.05e-14 | 70.5 |
| MS.gene35589.t1 | AT1G79180 | 57.778 | 45 | 19 | 0 | 2 | 46 | 4 | 48 | 5.69e-14 | 71.6 |
| MS.gene35589.t1 | AT1G22640 | 66.667 | 39 | 13 | 0 | 47 | 85 | 17 | 55 | 3.78e-13 | 67.4 |
| MS.gene35589.t1 | AT5G14340 | 60.000 | 45 | 18 | 0 | 47 | 91 | 11 | 55 | 8.24e-13 | 66.2 |
| MS.gene35589.t1 | AT4G01680 | 39.024 | 82 | 47 | 1 | 1 | 79 | 1 | 82 | 1.48e-12 | 67.8 |
| MS.gene35589.t1 | AT4G01680 | 43.038 | 79 | 34 | 1 | 12 | 90 | 77 | 144 | 6.78e-12 | 65.9 |
| MS.gene35589.t1 | AT3G47600 | 50.746 | 67 | 22 | 3 | 11 | 77 | 58 | 113 | 4.56e-12 | 66.2 |
| MS.gene35589.t1 | AT1G74430 | 61.905 | 42 | 16 | 0 | 47 | 88 | 20 | 61 | 4.78e-12 | 64.3 |
| MS.gene35589.t1 | AT3G12820 | 46.970 | 66 | 24 | 1 | 11 | 76 | 18 | 72 | 6.03e-12 | 63.9 |
| MS.gene35589.t1 | AT1G18960 | 40.000 | 90 | 43 | 3 | 3 | 92 | 49 | 127 | 6.36e-12 | 65.5 |
| MS.gene35589.t1 | AT1G74650 | 52.830 | 53 | 24 | 1 | 43 | 94 | 9 | 61 | 1.52e-11 | 63.9 |
| MS.gene35589.t1 | AT1G74650 | 55.102 | 49 | 21 | 1 | 47 | 94 | 8 | 56 | 3.59e-11 | 62.8 |
| MS.gene35589.t1 | AT3G46130 | 33.645 | 107 | 29 | 1 | 9 | 73 | 6 | 112 | 4.59e-11 | 62.4 |
| MS.gene35589.t1 | AT1G71030 | 55.814 | 43 | 19 | 0 | 43 | 85 | 39 | 81 | 7.12e-11 | 60.8 |
| MS.gene35589.t1 | AT1G71030 | 55.814 | 43 | 19 | 0 | 43 | 85 | 53 | 95 | 7.94e-11 | 60.8 |
| MS.gene35589.t1 | AT5G59780 | 47.619 | 63 | 22 | 2 | 11 | 73 | 39 | 90 | 8.12e-11 | 61.2 |
| MS.gene35589.t1 | AT3G46130 | 47.619 | 63 | 22 | 2 | 11 | 73 | 29 | 80 | 9.12e-11 | 61.2 |
| MS.gene35589.t1 | AT3G46130 | 47.619 | 63 | 22 | 2 | 11 | 73 | 39 | 90 | 9.98e-11 | 61.2 |
Find 67 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAGATAAAGAATTTC+TGG | 0.217847 | 3.3:+64262030 | MS.gene35589:CDS |
| AGCAAACATGACAGAACTTA+TGG | 0.291406 | 3.3:+64262154 | MS.gene35589:CDS |
| GAGTCCAAGGTCCTTTCTTT+AGG | 0.299866 | 3.3:-64261218 | None:intergenic |
| TAAGATAAATCATGCATAAT+GGG | 0.300700 | 3.3:-64262749 | None:intergenic |
| TTGTTCCATGTTTGTGATCA+TGG | 0.305258 | 3.3:-64262336 | None:intergenic |
| ATCTCATTATCTGTTCTTCC+AGG | 0.321841 | 3.3:-64262017 | None:intergenic |
| GACCCTCTCCAGTATCTTAT+TGG | 0.336984 | 3.3:+64262705 | MS.gene35589:CDS |
| GCATTTAGAGGAACAGATAT+TGG | 0.337009 | 3.3:-64262623 | None:intergenic |
| GATTGTGTTTAATAAACTTA+AGG | 0.341619 | 3.3:-64262366 | None:intergenic |
| TGTTTGTGATCATGGCATTT+TGG | 0.355569 | 3.3:-64262328 | None:intergenic |
| TTAAGATAAATCATGCATAA+TGG | 0.364715 | 3.3:-64262750 | None:intergenic |
| ATTGTGTTTAATAAACTTAA+GGG | 0.382518 | 3.3:-64262365 | None:intergenic |
| TGTGAAAGAGAACATAATAA+TGG | 0.389720 | 3.3:+64262394 | MS.gene35589:CDS |
| GTGGAAACAAGATCAGTTCT+TGG | 0.391507 | 3.3:-64262110 | None:intergenic |
| ATATACAAACCAGCTAGCTT+AGG | 0.400759 | 3.3:-64261306 | None:intergenic |
| GTTCTTGGTTGATGAGTCAT+TGG | 0.401091 | 3.3:-64262095 | None:intergenic |
| TTTGCTAAAGCTAGTAGATA+TGG | 0.401581 | 3.3:-64262137 | None:intergenic |
| TTCATCAACTGTTGCAAAGT+TGG | 0.405862 | 3.3:-64262567 | None:intergenic |
| AGTTCAGACCAATAAGATAC+TGG | 0.423026 | 3.3:-64262713 | None:intergenic |
| AATAATGGACTGTTCACAAC+TGG | 0.429961 | 3.3:+64262409 | MS.gene35589:CDS |
| ATCTGTTCCTCTAAATGCTA+TGG | 0.430587 | 3.3:+64262628 | MS.gene35589:CDS |
| GAAATCCCCATAGCATTTAG+AGG | 0.431719 | 3.3:-64262635 | None:intergenic |
| AAGATTGGAGTAAATATTGA+AGG | 0.443048 | 3.3:-64262268 | None:intergenic |
| AGCAACATGGCCATGGAAGT+TGG | 0.453352 | 3.3:+64261274 | MS.gene35589:CDS |
| TTATAGAAGAATTTGAAGAT+TGG | 0.453453 | 3.3:-64262283 | None:intergenic |
| TATACAAACCAGCTAGCTTA+GGG | 0.459441 | 3.3:-64261305 | None:intergenic |
| TCTGTTCCTCTAAATGCTAT+GGG | 0.463500 | 3.3:+64262629 | MS.gene35589:CDS |
| TGATCTTCTTCAGGAGTCCA+AGG | 0.474736 | 3.3:-64261231 | None:intergenic |
| AGCAGCTGCACTTCTAGCTA+TGG | 0.500161 | 3.3:+64262671 | MS.gene35589:CDS |
| TCTAGCTATGGAGGAGGAGG+AGG | 0.506389 | 3.3:+64262683 | MS.gene35589:CDS |
| ACAGATATTGGAGCAGAAGA+TGG | 0.509435 | 3.3:-64262611 | None:intergenic |
| AGCACACTTTGGTGGTGGAG+TGG | 0.513813 | 3.3:-64262461 | None:intergenic |
| AGAGCACTCCCTAAGCTAGC+TGG | 0.515419 | 3.3:+64261297 | MS.gene35589:CDS |
| ATCATCATAATCAGTCATCA+TGG | 0.518139 | 3.3:+64262177 | MS.gene35589:CDS |
| GATGAGAGTGGCCTAAAGAA+AGG | 0.535518 | 3.3:+64261207 | MS.gene35589:CDS |
| GCAATTGCCACACATCTACC+TGG | 0.544495 | 3.3:+64261999 | MS.gene35589:CDS |
| AATGCTATGGGGATTTCAGC+AGG | 0.548148 | 3.3:+64262641 | MS.gene35589:CDS |
| TAAAGCTAGTAGATATGGTA+TGG | 0.550765 | 3.3:-64262132 | None:intergenic |
| AAAAGTGGGGTAGCACACTT+TGG | 0.555610 | 3.3:-64262472 | None:intergenic |
| GGGGTAGCACACTTTGGTGG+TGG | 0.564100 | 3.3:-64262466 | None:intergenic |
| ACTTCTAGCTATGGAGGAGG+AGG | 0.567377 | 3.3:+64262680 | MS.gene35589:CDS |
| AGGCCACTCTCATCACAACA+TGG | 0.571440 | 3.3:-64261198 | None:intergenic |
| TGCACTTCTAGCTATGGAGG+AGG | 0.572187 | 3.3:+64262677 | MS.gene35589:CDS |
| CAGTTGATGAAACATCATCA+TGG | 0.575439 | 3.3:+64262579 | MS.gene35589:CDS |
| CACATTCAGCAACATGGCCA+TGG | 0.584236 | 3.3:+64261267 | MS.gene35589:CDS |
| GGAGTGCTCTCCAACTTCCA+TGG | 0.591428 | 3.3:-64261284 | None:intergenic |
| TCATCATAATCAGTCATCAT+GGG | 0.591481 | 3.3:+64262178 | MS.gene35589:CDS |
| TTGAATAATGAACAAAGTCA+AGG | 0.593810 | 3.3:+64262533 | MS.gene35589:CDS |
| GTGGAGTGGTTGAGAAAATG+AGG | 0.597647 | 3.3:-64262447 | None:intergenic |
| AGCTGCACTTCTAGCTATGG+AGG | 0.598375 | 3.3:+64262674 | MS.gene35589:CDS |
| GGCCACTCTCATCACAACAT+GGG | 0.598870 | 3.3:-64261197 | None:intergenic |
| AACTGAAAGAGACTTGTTGT+GGG | 0.601545 | 3.3:-64262499 | None:intergenic |
| GTGGCCTAAAGAAAGGACCT+TGG | 0.604603 | 3.3:+64261214 | MS.gene35589:CDS |
| ATTAGTAACATAAAATGGGA+AGG | 0.608632 | 3.3:+64261172 | None:intergenic |
| AGTGGGGTAGCACACTTTGG+TGG | 0.613172 | 3.3:-64262469 | None:intergenic |
| AGCTAGTAGATATGGTATGG+TGG | 0.620436 | 3.3:-64262129 | None:intergenic |
| AAGATAAATCATGCATAATG+GGG | 0.630533 | 3.3:-64262748 | None:intergenic |
| AAATGCCATGATCACAAACA+TGG | 0.631165 | 3.3:+64262331 | MS.gene35589:CDS |
| GTTGAACACATTCAGCAACA+TGG | 0.636416 | 3.3:+64261261 | MS.gene35589:CDS |
| GACCAATAAGATACTGGAGA+GGG | 0.637113 | 3.3:-64262707 | None:intergenic |
| GCCACTCTCATCACAACATG+GGG | 0.657364 | 3.3:-64261196 | None:intergenic |
| GAACTGAAAGAGACTTGTTG+TGG | 0.658874 | 3.3:-64262500 | None:intergenic |
| CTGTTCCTCTAAATGCTATG+GGG | 0.667441 | 3.3:+64262630 | MS.gene35589:CDS |
| AGACCAATAAGATACTGGAG+AGG | 0.671942 | 3.3:-64262708 | None:intergenic |
| AATAATGAACAAAGTCAAGG+TGG | 0.687399 | 3.3:+64262536 | MS.gene35589:CDS |
| TGTTCTTCCAGGTAGATGTG+TGG | 0.695449 | 3.3:-64262006 | None:intergenic |
| TCCCCATGTTGTGATGAGAG+TGG | 0.715025 | 3.3:+64261195 | MS.gene35589:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAATATGAATG+AGG | - | chr3.3:64261398-64261417 | None:intergenic | 10.0% |
| !! | ATTGTGTTTAATAAACTTAA+GGG | - | chr3.3:64262368-64262387 | None:intergenic | 15.0% |
| !! | CAAATTAAATTAAATTCTCT+AGG | + | chr3.3:64261902-64261921 | MS.gene35589:intron | 15.0% |
| !!! | AGATTTTTTTTTTTTTTTGG+TGG | - | chr3.3:64261653-64261672 | None:intergenic | 15.0% |
| !! | ATAATGAGATAAAGAATTTC+TGG | + | chr3.3:64262030-64262049 | MS.gene35589:CDS | 20.0% |
| !! | CATAATTCAAATGATAGTAT+TGG | - | chr3.3:64261687-64261706 | None:intergenic | 20.0% |
| !! | GATTGTGTTTAATAAACTTA+AGG | - | chr3.3:64262369-64262388 | None:intergenic | 20.0% |
| !! | GTTGCAATACTATTAATATA+TGG | + | chr3.3:64261350-64261369 | MS.gene35589:intron | 20.0% |
| !! | TAAGATAAATCATGCATAAT+GGG | - | chr3.3:64262752-64262771 | None:intergenic | 20.0% |
| !! | TTAAGATAAATCATGCATAA+TGG | - | chr3.3:64262753-64262772 | None:intergenic | 20.0% |
| !! | TTATAGAAGAATTTGAAGAT+TGG | - | chr3.3:64262286-64262305 | None:intergenic | 20.0% |
| !!! | ATGTTATCACTTCATTTTTT+TGG | + | chr3.3:64261704-64261723 | MS.gene35589:intron | 20.0% |
| !!! | ATTTTAAGATTTGATACCTT+TGG | - | chr3.3:64261627-64261646 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTGCAATTTTGC+AGG | + | chr3.3:64261410-64261429 | MS.gene35589:intron | 20.0% |
| ! | AAGATAAATCATGCATAATG+GGG | - | chr3.3:64262751-64262770 | None:intergenic | 25.0% |
| ! | AAGATTGGAGTAAATATTGA+AGG | - | chr3.3:64262271-64262290 | None:intergenic | 25.0% |
| ! | AATATCAGGCCTTAAATAAT+TGG | - | chr3.3:64261474-64261493 | None:intergenic | 25.0% |
| ! | GTATTGCAACATATATATAG+AGG | - | chr3.3:64261340-64261359 | None:intergenic | 25.0% |
| ! | TACCTTTGGTTATATTTGTT+AGG | - | chr3.3:64261613-64261632 | None:intergenic | 25.0% |
| ! | TGTGAAAGAGAACATAATAA+TGG | + | chr3.3:64262394-64262413 | MS.gene35589:CDS | 25.0% |
| ! | TTCCTAACAAATATAACCAA+AGG | + | chr3.3:64261608-64261627 | MS.gene35589:intron | 25.0% |
| ! | TTGAATAATGAACAAAGTCA+AGG | + | chr3.3:64262533-64262552 | MS.gene35589:CDS | 25.0% |
| !! | AAGAAAAAGTTGATTCAGAT+GGG | + | chr3.3:64262065-64262084 | MS.gene35589:CDS | 25.0% |
| !! | AATTTTCCTCTCTTAATATC+AGG | - | chr3.3:64261488-64261507 | None:intergenic | 25.0% |
| !!! | TAAACGAGTTGAATTTTCAA+CGG | - | chr3.3:64261831-64261850 | None:intergenic | 25.0% |
| AATAATGAACAAAGTCAAGG+TGG | + | chr3.3:64262536-64262555 | MS.gene35589:CDS | 30.0% | |
| ATCATCATAATCAGTCATCA+TGG | + | chr3.3:64262177-64262196 | MS.gene35589:CDS | 30.0% | |
| TAAAGCTAGTAGATATGGTA+TGG | - | chr3.3:64262135-64262154 | None:intergenic | 30.0% | |
| TAAGGTGGACCAATTATTTA+AGG | + | chr3.3:64261462-64261481 | MS.gene35589:intron | 30.0% | |
| TCATCATAATCAGTCATCAT+GGG | + | chr3.3:64262178-64262197 | MS.gene35589:CDS | 30.0% | |
| TTTGCTAAAGCTAGTAGATA+TGG | - | chr3.3:64262140-64262159 | None:intergenic | 30.0% | |
| ! | AGGAAAATTTTCTCAAGAAG+AGG | + | chr3.3:64261499-64261518 | MS.gene35589:intron | 30.0% |
| ! | GAAGAAAAAGTTGATTCAGA+TGG | + | chr3.3:64262064-64262083 | MS.gene35589:CDS | 30.0% |
| !!! | TTGGTCTGAACTTTTTTTTG+AGG | + | chr3.3:64262724-64262743 | MS.gene35589:CDS | 30.0% |
| AAAGTACGTACTTGTTTCCA+AGG | - | chr3.3:64261553-64261572 | None:intergenic | 35.0% | |
| AAATGCCATGATCACAAACA+TGG | + | chr3.3:64262331-64262350 | MS.gene35589:CDS | 35.0% | |
| AATTGCTGACCATCTGTTAA+AGG | - | chr3.3:64261985-64262004 | None:intergenic | 35.0% | |
| AGCAAACATGACAGAACTTA+TGG | + | chr3.3:64262154-64262173 | MS.gene35589:CDS | 35.0% | |
| AGTTCAGACCAATAAGATAC+TGG | - | chr3.3:64262716-64262735 | None:intergenic | 35.0% | |
| ATAGATGTGGAAAGAGTTGT+AGG | + | chr3.3:64261438-64261457 | MS.gene35589:intron | 35.0% | |
| ATCTCATTATCTGTTCTTCC+AGG | - | chr3.3:64262020-64262039 | None:intergenic | 35.0% | |
| ATCTGTTCCTCTAAATGCTA+TGG | + | chr3.3:64262628-64262647 | MS.gene35589:CDS | 35.0% | |
| CTATATGCACCTTTAACAGA+TGG | + | chr3.3:64261973-64261992 | MS.gene35589:intron | 35.0% | |
| CTTCATCTTCATTCAATCCT+TGG | + | chr3.3:64261533-64261552 | MS.gene35589:intron | 35.0% | |
| GCATTTAGAGGAACAGATAT+TGG | - | chr3.3:64262626-64262645 | None:intergenic | 35.0% | |
| TCTGTTCCTCTAAATGCTAT+GGG | + | chr3.3:64262629-64262648 | MS.gene35589:CDS | 35.0% | |
| TTAAGGCCTGATATTAAGAG+AGG | + | chr3.3:64261479-64261498 | MS.gene35589:intron | 35.0% | |
| TTCATCAACTGTTGCAAAGT+TGG | - | chr3.3:64262570-64262589 | None:intergenic | 35.0% | |
| TTGTTCCATGTTTGTGATCA+TGG | - | chr3.3:64262339-64262358 | None:intergenic | 35.0% | |
| TTGTTGTGGGTCTAAAAAGT+GGG | - | chr3.3:64262489-64262508 | None:intergenic | 35.0% | |
| TTTGCAGGTCTTAATAGATG+TGG | + | chr3.3:64261425-64261444 | MS.gene35589:intron | 35.0% | |
| ! | ATATACAAACCAGCTAGCTT+AGG | - | chr3.3:64261309-64261328 | None:intergenic | 35.0% |
| ! | TATACAAACCAGCTAGCTTA+GGG | - | chr3.3:64261308-64261327 | None:intergenic | 35.0% |
| ! | TGTTTGTGATCATGGCATTT+TGG | - | chr3.3:64262331-64262350 | None:intergenic | 35.0% |
| !! | AACTGAAAGAGACTTGTTGT+GGG | - | chr3.3:64262502-64262521 | None:intergenic | 35.0% |
| !! | AATAATGGACTGTTCACAAC+TGG | + | chr3.3:64262409-64262428 | MS.gene35589:CDS | 35.0% |
| !! | CAGTTGATGAAACATCATCA+TGG | + | chr3.3:64262579-64262598 | MS.gene35589:CDS | 35.0% |
| !!! | ACTAGCTTTTGATCTTCTTC+AGG | - | chr3.3:64261243-64261262 | None:intergenic | 35.0% |
| ACAGATATTGGAGCAGAAGA+TGG | - | chr3.3:64262614-64262633 | None:intergenic | 40.0% | |
| AGACCAATAAGATACTGGAG+AGG | - | chr3.3:64262711-64262730 | None:intergenic | 40.0% | |
| AGCTAGTAGATATGGTATGG+TGG | - | chr3.3:64262132-64262151 | None:intergenic | 40.0% | |
| CTGTTCCTCTAAATGCTATG+GGG | + | chr3.3:64262630-64262649 | MS.gene35589:CDS | 40.0% | |
| GAAATCCCCATAGCATTTAG+AGG | - | chr3.3:64262638-64262657 | None:intergenic | 40.0% | |
| GACCAATAAGATACTGGAGA+GGG | - | chr3.3:64262710-64262729 | None:intergenic | 40.0% | |
| GTGGAAACAAGATCAGTTCT+TGG | - | chr3.3:64262113-64262132 | None:intergenic | 40.0% | |
| GTTGAACACATTCAGCAACA+TGG | + | chr3.3:64261261-64261280 | MS.gene35589:CDS | 40.0% | |
| TGTTGTGGGTCTAAAAAGTG+GGG | - | chr3.3:64262488-64262507 | None:intergenic | 40.0% | |
| ! | CTTGTTGTGGGTCTAAAAAG+TGG | - | chr3.3:64262490-64262509 | None:intergenic | 40.0% |
| !! | GAACTGAAAGAGACTTGTTG+TGG | - | chr3.3:64262503-64262522 | None:intergenic | 40.0% |
| !! | GATCATGGCATTTTGGTCAT+AGG | - | chr3.3:64262324-64262343 | None:intergenic | 40.0% |
| !! | GTTCTTGGTTGATGAGTCAT+TGG | - | chr3.3:64262098-64262117 | None:intergenic | 40.0% |
| AAAAGTGGGGTAGCACACTT+TGG | - | chr3.3:64262475-64262494 | None:intergenic | 45.0% | |
| AATGCTATGGGGATTTCAGC+AGG | + | chr3.3:64262641-64262660 | MS.gene35589:CDS | 45.0% | |
| GAAAGAGTTGTAGGCTAAGG+TGG | + | chr3.3:64261447-64261466 | MS.gene35589:intron | 45.0% | |
| GACCCTCTCCAGTATCTTAT+TGG | + | chr3.3:64262705-64262724 | MS.gene35589:CDS | 45.0% | |
| GAGTCCAAGGTCCTTTCTTT+AGG | - | chr3.3:64261221-64261240 | None:intergenic | 45.0% | |
| GATGAGAGTGGCCTAAAGAA+AGG | + | chr3.3:64261207-64261226 | MS.gene35589:CDS | 45.0% | |
| GTGGAAAGAGTTGTAGGCTA+AGG | + | chr3.3:64261444-64261463 | MS.gene35589:intron | 45.0% | |
| GTGGAGTGGTTGAGAAAATG+AGG | - | chr3.3:64262450-64262469 | None:intergenic | 45.0% | |
| TGATCTTCTTCAGGAGTCCA+AGG | - | chr3.3:64261234-64261253 | None:intergenic | 45.0% | |
| TGTTCTTCCAGGTAGATGTG+TGG | - | chr3.3:64262009-64262028 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAATTAAAGTTA+TGG | - | chr3.3:64261581-64261600 | None:intergenic | 5.0% |
| !!! | TTAAGATTTTTTTTTTTTTT+TGG | - | chr3.3:64261656-64261675 | None:intergenic | 5.0% |
| AGCAACATGGCCATGGAAGT+TGG | + | chr3.3:64261274-64261293 | MS.gene35589:CDS | 50.0% | |
| AGGCCACTCTCATCACAACA+TGG | - | chr3.3:64261201-64261220 | None:intergenic | 50.0% | |
| CACATTCAGCAACATGGCCA+TGG | + | chr3.3:64261267-64261286 | MS.gene35589:CDS | 50.0% | |
| GCAATTGCCACACATCTACC+TGG | + | chr3.3:64261999-64262018 | MS.gene35589:CDS | 50.0% | |
| GCCACTCTCATCACAACATG+GGG | - | chr3.3:64261199-64261218 | None:intergenic | 50.0% | |
| GGCCACTCTCATCACAACAT+GGG | - | chr3.3:64261200-64261219 | None:intergenic | 50.0% | |
| GTGGCCTAAAGAAAGGACCT+TGG | + | chr3.3:64261214-64261233 | MS.gene35589:CDS | 50.0% | |
| TCCCCATGTTGTGATGAGAG+TGG | + | chr3.3:64261195-64261214 | MS.gene35589:CDS | 50.0% | |
| ! | ACTTCTAGCTATGGAGGAGG+AGG | + | chr3.3:64262680-64262699 | MS.gene35589:CDS | 50.0% |
| ! | AGCAGCTGCACTTCTAGCTA+TGG | + | chr3.3:64262671-64262690 | MS.gene35589:CDS | 50.0% |
| ! | AGCTGCACTTCTAGCTATGG+AGG | + | chr3.3:64262674-64262693 | MS.gene35589:CDS | 50.0% |
| ! | TGCACTTCTAGCTATGGAGG+AGG | + | chr3.3:64262677-64262696 | MS.gene35589:CDS | 50.0% |
| AGTGGGGTAGCACACTTTGG+TGG | - | chr3.3:64262472-64262491 | None:intergenic | 55.0% | |
| TCTAGCTATGGAGGAGGAGG+AGG | + | chr3.3:64262683-64262702 | MS.gene35589:CDS | 55.0% | |
| ! | AGAGCACTCCCTAAGCTAGC+TGG | + | chr3.3:64261297-64261316 | MS.gene35589:CDS | 55.0% |
| ! | GGAGTGCTCTCCAACTTCCA+TGG | - | chr3.3:64261287-64261306 | None:intergenic | 55.0% |
| !! | AGCACACTTTGGTGGTGGAG+TGG | - | chr3.3:64262464-64262483 | None:intergenic | 55.0% |
| GGGGTAGCACACTTTGGTGG+TGG | - | chr3.3:64262469-64262488 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64261186 | 64262772 | 64261186 | ID=MS.gene35589 |
| chr3.3 | mRNA | 64261186 | 64262772 | 64261186 | ID=MS.gene35589.t1;Parent=MS.gene35589 |
| chr3.3 | exon | 64261186 | 64261322 | 64261186 | ID=MS.gene35589.t1.exon1;Parent=MS.gene35589.t1 |
| chr3.3 | CDS | 64261186 | 64261322 | 64261186 | ID=cds.MS.gene35589.t1;Parent=MS.gene35589.t1 |
| chr3.3 | exon | 64261992 | 64262772 | 64261992 | ID=MS.gene35589.t1.exon2;Parent=MS.gene35589.t1 |
| chr3.3 | CDS | 64261992 | 64262772 | 64261992 | ID=cds.MS.gene35589.t1;Parent=MS.gene35589.t1 |
| Gene Sequence |
| Protein sequence |
