AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62721

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62721.t1 MTR_6g012630 98.327 538 9 0 1 538 1 538 0.0 1070
MS.gene62721.t1 MTR_6g012630 98.327 538 9 0 1 538 1 538 0.0 1069
MS.gene62721.t1 MTR_6g012630 98.595 427 6 0 1 427 1 427 0.0 850
MS.gene62721.t1 MTR_6g012630 32.558 215 128 5 280 477 37 251 7.36e-23 101
MS.gene62721.t1 MTR_7g011080 68.182 550 157 10 1 536 1 546 0.0 656
MS.gene62721.t1 MTR_2g019090 33.564 578 293 21 11 530 5 549 6.44e-84 273
MS.gene62721.t1 MTR_2g019090 28.618 304 164 8 45 318 311 591 6.13e-23 103
MS.gene62721.t1 MTR_2g019090 33.737 578 291 23 11 530 5 548 4.14e-82 268
MS.gene62721.t1 MTR_2g019090 28.875 329 179 9 45 341 310 615 2.23e-26 114
MS.gene62721.t1 MTR_3g110650 37.473 459 217 11 47 451 32 474 6.57e-73 245
MS.gene62721.t1 MTR_3g110650 32.906 234 125 6 45 277 310 512 4.86e-32 130
MS.gene62721.t1 MTR_4g093650 35.698 437 242 12 40 451 13 435 8.75e-62 214
MS.gene62721.t1 MTR_4g093650 30.462 325 169 9 44 322 263 576 1.96e-33 134
MS.gene62721.t1 MTR_4g008080 33.023 430 251 9 32 460 3 396 4.07e-57 201
MS.gene62721.t1 MTR_4g008080 33.333 207 123 4 10 216 191 382 9.75e-28 117
MS.gene62721.t1 MTR_7g082290 64.671 167 26 2 350 516 12 145 3.96e-53 179
MS.gene62721.t1 MTR_3g091800 31.166 446 246 12 47 451 63 488 2.74e-49 180
MS.gene62721.t1 MTR_3g091800 39.459 185 93 6 290 455 64 248 6.57e-22 100
MS.gene62721.t1 MTR_3g091800 26.752 314 189 10 45 338 329 621 3.96e-17 85.1
MS.gene62721.t1 MTR_5g031720 30.485 433 279 11 33 454 25 446 3.71e-45 168
MS.gene62721.t1 MTR_5g031720 25.589 297 199 7 48 330 276 564 4.88e-19 90.9
MS.gene62721.t1 MTR_2g009650 43.023 172 91 3 287 451 329 500 9.43e-32 130
MS.gene62721.t1 MTR_2g009650 36.872 179 104 2 43 219 327 498 3.45e-30 125
MS.gene62721.t1 MTR_2g009650 26.087 414 229 13 49 445 50 403 1.50e-26 114
MS.gene62721.t1 MTR_2g009650 28.033 239 141 7 238 456 2 229 1.13e-13 74.3
MS.gene62721.t1 MTR_7g080630 29.371 286 150 8 45 324 98 337 3.82e-27 113
MS.gene62721.t1 MTR_7g080630 31.507 219 122 8 255 449 56 270 1.21e-13 73.2
MS.gene62721.t1 MTR_7g080630 34.783 184 106 4 45 222 98 273 2.88e-25 106
MS.gene62721.t1 MTR_7g080630 31.507 219 122 8 255 449 56 270 1.03e-13 72.4
MS.gene62721.t1 MTR_7g080630 33.184 223 126 7 45 256 98 308 5.04e-25 105
MS.gene62721.t1 MTR_7g080630 31.507 219 122 8 255 449 56 270 1.18e-13 72.4
MS.gene62721.t1 MTR_7g115340 36.842 171 98 4 46 216 46 206 5.29e-25 108
MS.gene62721.t1 MTR_7g115340 25.871 201 128 4 255 453 32 213 4.89e-15 77.8
MS.gene62721.t1 MTR_1g070380 36.416 173 100 3 46 216 164 328 1.09e-24 108
MS.gene62721.t1 MTR_1g070380 32.558 172 110 3 288 453 164 335 1.85e-15 79.7
MS.gene62721.t1 MTR_7g115340 36.842 171 98 4 46 216 114 274 1.23e-24 107
MS.gene62721.t1 MTR_7g115340 25.871 201 128 4 255 453 100 281 9.35e-15 77.4
MS.gene62721.t1 MTR_1g070380 36.207 174 100 4 46 216 164 329 2.78e-23 103
MS.gene62721.t1 MTR_1g070380 32.948 173 109 4 288 453 164 336 1.47e-14 77.0
MS.gene62721.t1 MTR_2g038020 32.386 176 106 3 46 217 69 235 1.34e-19 92.0
MS.gene62721.t1 MTR_2g038020 31.844 179 110 3 292 463 73 246 7.75e-17 83.6
MS.gene62721.t1 MTR_4g127380 31.977 172 108 2 48 217 45 209 4.32e-18 87.0
MS.gene62721.t1 MTR_4g127380 31.633 196 119 4 279 460 27 221 6.47e-15 77.4
MS.gene62721.t1 MTR_1g090773 24.915 293 180 11 47 331 36 296 8.21e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62721.t1 AT5G15270 62.127 536 183 11 6 536 11 531 0.0 642
MS.gene62721.t1 AT5G15270 62.357 526 181 10 6 529 11 521 0.0 636
MS.gene62721.t1 AT5G15270 62.357 526 181 10 6 529 11 521 0.0 636
MS.gene62721.t1 AT1G14170 51.335 487 198 11 7 483 6 463 8.07e-143 421
MS.gene62721.t1 AT1G14170 51.648 455 185 9 38 483 10 438 2.22e-135 400
MS.gene62721.t1 AT1G14170 51.556 450 183 9 43 483 7 430 9.63e-134 396
MS.gene62721.t1 AT5G46190 34.698 464 240 15 38 454 33 480 1.44e-68 233
MS.gene62721.t1 AT5G46190 34.698 464 240 15 38 454 33 480 1.44e-68 233
MS.gene62721.t1 AT5G46190 34.698 464 240 15 38 454 33 480 1.44e-68 233
MS.gene62721.t1 AT5G46190 34.698 464 240 15 38 454 33 480 5.91e-68 232
MS.gene62721.t1 AT4G18375 30.616 552 296 19 27 534 11 519 3.75e-62 213
MS.gene62721.t1 AT4G18375 30.978 552 294 20 27 534 11 519 2.09e-61 213
MS.gene62721.t1 AT4G18375 30.667 300 156 8 45 327 310 574 7.97e-22 99.8
MS.gene62721.t1 AT5G53060 34.642 433 240 14 47 451 68 485 3.74e-58 203
MS.gene62721.t1 AT1G51580 30.599 451 239 11 45 451 17 437 1.38e-57 202
MS.gene62721.t1 AT1G51580 34.286 175 102 2 42 216 271 432 4.52e-25 109
MS.gene62721.t1 AT5G53060 34.642 433 240 14 47 451 68 485 4.02e-57 202
MS.gene62721.t1 AT2G03110 49.020 153 67 4 80 222 1 152 4.01e-39 140
MS.gene62721.t1 AT2G03110 49.020 153 67 4 80 222 1 152 4.01e-39 140
MS.gene62721.t1 AT2G03110 49.020 153 67 4 80 222 1 152 4.01e-39 140
MS.gene62721.t1 AT5G64390 38.983 177 97 3 42 216 447 614 1.59e-31 130
MS.gene62721.t1 AT5G64390 34.595 185 112 4 274 451 437 619 1.19e-24 108
MS.gene62721.t1 AT5G64390 34.466 206 112 4 22 213 22 218 1.63e-24 108
MS.gene62721.t1 AT5G64390 33.714 175 89 5 290 442 48 217 7.98e-14 75.1
MS.gene62721.t1 AT5G64390 38.983 177 97 3 42 216 447 614 1.65e-31 130
MS.gene62721.t1 AT5G64390 34.595 185 112 4 274 451 437 619 1.25e-24 108
MS.gene62721.t1 AT5G64390 34.466 206 112 4 22 213 22 218 1.69e-24 108
MS.gene62721.t1 AT5G64390 33.714 175 89 5 290 442 48 217 8.18e-14 75.1
MS.gene62721.t1 AT5G64390 38.983 177 97 3 42 216 447 614 1.72e-31 130
MS.gene62721.t1 AT5G64390 34.595 185 112 4 274 451 437 619 1.16e-24 108
MS.gene62721.t1 AT5G64390 34.123 211 116 4 22 218 22 223 1.69e-24 108
MS.gene62721.t1 AT5G64390 32.370 173 94 5 290 442 48 217 8.28e-14 75.1
MS.gene62721.t1 AT2G22600 27.253 455 255 14 45 454 23 446 2.36e-27 116
MS.gene62721.t1 AT4G18375 31.429 315 162 9 233 534 33 306 3.34e-27 114
MS.gene62721.t1 AT4G18375 29.747 316 168 9 45 341 97 377 2.24e-22 99.8
MS.gene62721.t1 AT5G09560 25.885 537 296 18 45 517 28 526 2.36e-25 110
MS.gene62721.t1 AT3G04610 27.660 329 173 11 46 327 162 472 6.59e-25 108
MS.gene62721.t1 AT3G04610 28.090 178 122 3 288 460 162 338 9.22e-16 80.5
MS.gene62721.t1 AT3G04610 27.660 329 173 11 46 327 162 472 6.59e-25 108
MS.gene62721.t1 AT3G04610 28.090 178 122 3 288 460 162 338 9.22e-16 80.5
MS.gene62721.t1 AT3G04610 27.660 329 173 11 46 327 186 496 8.49e-25 108
MS.gene62721.t1 AT3G04610 28.090 178 122 3 288 460 186 362 1.06e-15 80.5
MS.gene62721.t1 AT3G04610 27.660 329 173 11 46 327 186 496 8.49e-25 108
MS.gene62721.t1 AT3G04610 28.090 178 122 3 288 460 186 362 1.06e-15 80.5
MS.gene62721.t1 AT4G26000 25.532 329 196 8 46 337 73 389 5.04e-19 90.5
MS.gene62721.t1 AT4G26000 31.250 176 113 3 292 460 77 251 1.81e-14 76.3
MS.gene62721.t1 AT5G04430 27.835 291 174 10 47 331 35 295 6.04e-17 82.8
MS.gene62721.t1 AT5G04430 27.083 288 159 10 47 331 35 274 5.88e-13 70.5
MS.gene62721.t1 AT5G53060 37.209 129 60 5 47 159 68 191 1.58e-12 67.0
MS.gene62721.t1 AT1G33680 28.922 204 102 8 25 211 214 391 6.51e-11 65.5

Find 163 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTCTTGTTGGTCCTTA+TGG 0.120314 6.3:+7204919 MS.gene62721:CDS
TGCTTTCTTGATTAGATTTC+GGG 0.149531 6.3:+7205728 MS.gene62721:intron
CTCCTCTTGTTGGTCCTTAT+GGG 0.178377 6.3:+7204920 MS.gene62721:CDS
GCACGAATTGGCTGCCTTAT+TGG 0.195380 6.3:+7205495 MS.gene62721:CDS
CTTTGACAGTATGCGAATAT+TGG 0.223025 6.3:-7205562 None:intergenic
AGAAAGATTGGTAGTATTAT+TGG 0.242270 6.3:+7203754 MS.gene62721:CDS
CAGAATTTACGTAGTGAAAC+TGG 0.258753 6.3:+7204087 MS.gene62721:CDS
GGACTATGAAAGTTATTCTT+TGG 0.260439 6.3:+7206156 MS.gene62721:CDS
GGAGCAGTTTGTGATTAATA+AGG 0.280124 6.3:+7203699 MS.gene62721:CDS
AACTTGCACAAGAGCATCTT+TGG 0.282982 6.3:-7205765 None:intergenic
TCCGTTTATCTGTAGCTTGC+TGG 0.283131 6.3:+7206118 MS.gene62721:intron
AATCAAATAAGGCAGGATTC+TGG 0.284752 6.3:+7205093 MS.gene62721:CDS
GGAAACCTTGGCGGCGTGAT+AGG 0.286167 6.3:+7205051 MS.gene62721:CDS
TTAGGTCCTGGTGACACTTA+TGG 0.290203 6.3:+7205968 MS.gene62721:CDS
TATGGAGGCTCAAGTGATTT+AGG 0.291524 6.3:+7205950 MS.gene62721:CDS
GATCAGATAGGTTGTGTTCT+TGG 0.294583 6.3:+7204045 MS.gene62721:CDS
GTTCGATTGGTTTGTCCAAC+TGG 0.320110 6.3:+7205030 MS.gene62721:CDS
CTTGCTGGAGGCAGTGGCTA+TGG 0.340659 6.3:+7206133 MS.gene62721:CDS
GTTCACCTCTTTAGTTGAAA+TGG 0.342169 6.3:-7205166 None:intergenic
GACTATGAAAGTTATTCTTT+GGG 0.351252 6.3:+7206157 MS.gene62721:CDS
TGCAGAACTATCAACTTTGA+TGG 0.352192 6.3:-7205121 None:intergenic
TTGCTGGAGGCAGTGGCTAT+GGG 0.353927 6.3:+7206134 MS.gene62721:CDS
GGATGCTGCAGTTGTGAAAA+AGG 0.356643 6.3:+7204759 MS.gene62721:CDS
GTGGGGATGGCTCCTCTTGT+TGG 0.359180 6.3:+7204910 MS.gene62721:CDS
GAGGCATAATAAATCAAATA+AGG 0.359602 6.3:+7205082 MS.gene62721:CDS
TCTACTGGAGCAGGAATATA+TGG 0.362425 6.3:-7205854 None:intergenic
ATCAAATAAGGCAGGATTCT+GGG 0.366431 6.3:+7205094 MS.gene62721:CDS
TAGATCCTCCTTTACCAATA+AGG 0.367203 6.3:-7205509 None:intergenic
CATTGTTTAAGATTCATGAT+AGG 0.377502 6.3:+7203944 MS.gene62721:CDS
CAAAGAGAAAGAAATAATTA+TGG 0.378615 6.3:+7203598 MS.gene62721:CDS
GTGAGATAGTTAAGCAATTG+AGG 0.389238 6.3:+7203785 MS.gene62721:CDS
GATAGAGAGGGTGCTGTCCC+TGG 0.396068 6.3:+7205815 MS.gene62721:CDS
GGCTCAGATTCGTATTCTTA+AGG 0.398785 6.3:+7204110 MS.gene62721:CDS
CTGTCATAGTTAAGAACATC+TGG 0.412089 6.3:-7205881 None:intergenic
CTCCGCCGTCATAGTCAGAC+TGG 0.412114 6.3:-7203636 None:intergenic
CTGTAGCTTGCTGGAGGCAG+TGG 0.416710 6.3:+7206127 MS.gene62721:intron
AATAACCATTTCAACTAAAG+AGG 0.425835 6.3:+7205161 MS.gene62721:CDS
ATGACGGCGGAGGAAATAAA+AGG 0.433275 6.3:+7203647 MS.gene62721:CDS
TCCCAGTGGTGGTTCACTCA+TGG 0.435069 6.3:+7204864 MS.gene62721:CDS
AGGATCGGTGAGACTGTGCC+GGG 0.437873 6.3:+7203829 MS.gene62721:CDS
GCAGGAATATATGGTAGAAC+TGG 0.442280 6.3:-7205845 None:intergenic
TTGTGTCCGGGGAGAAAGAT+TGG 0.447867 6.3:+7203742 MS.gene62721:CDS
TATATTCCTGCTCCAGTAGA+TGG 0.449132 6.3:+7205857 MS.gene62721:CDS
TCTCGAACTCAGCATTTACT+TGG 0.450339 6.3:+7204820 MS.gene62721:CDS
TGAGATAGTTAAGCAATTGA+GGG 0.451341 6.3:+7203786 MS.gene62721:CDS
TGGGACGGAATAGTACTGTT+TGG 0.451826 6.3:+7206176 MS.gene62721:CDS
TCCTCTTGTTGGTCCTTATG+GGG 0.452392 6.3:+7204921 MS.gene62721:CDS
AGAACATCTGGACCATCTAC+TGG 0.453048 6.3:-7205869 None:intergenic
TTGGTATCATCAGCACGAAT+TGG 0.454187 6.3:+7205483 MS.gene62721:CDS
CCCAGTGGTGGTTCACTCAT+GGG 0.456030 6.3:+7204865 MS.gene62721:CDS
GGTAGAACTGGAAGGAATCC+AGG 0.467927 6.3:-7205833 None:intergenic
ACCCATGAGTGAACCACCAC+TGG 0.471238 6.3:-7204866 None:intergenic
CCAACAGCTTAGCATTCACT+TGG 0.476223 6.3:-7204014 None:intergenic
TGCTTCTGATGATGATGAAA+TGG 0.478394 6.3:+7205602 MS.gene62721:CDS
GATTGGTAGTATTATTGGTA+GGG 0.478480 6.3:+7203759 MS.gene62721:CDS
AAAGTTGATAGTTCTGCAAA+AGG 0.479021 6.3:+7205126 MS.gene62721:CDS
GCAATTGAGGGTAGAAACTA+AGG 0.479035 6.3:+7203798 MS.gene62721:CDS
TAAAAGCACGGCTGCCTCTA+CGG 0.480414 6.3:-7205397 None:intergenic
ATTGTTTAAGATTCATGATA+GGG 0.480776 6.3:+7203945 MS.gene62721:CDS
ATAGGTTGTGTTCTTGGAAA+AGG 0.484775 6.3:+7204051 MS.gene62721:CDS
GGAATGGAGGTGATCATGAC+AGG 0.484928 6.3:+7203671 MS.gene62721:CDS
AGGACCTCCGATTGTGGGGA+TGG 0.487016 6.3:+7204897 MS.gene62721:CDS
TGAAGATTTACAGAGTGATC+AGG 0.487322 6.3:+7203975 MS.gene62721:CDS
AACTGCAGGACCTCCGATTG+TGG 0.487570 6.3:+7204891 MS.gene62721:CDS
GAGGTGATCATGACAGGGAT+AGG 0.494577 6.3:+7203677 MS.gene62721:CDS
CATAATAAATCAAATAAGGC+AGG 0.496498 6.3:+7205086 MS.gene62721:CDS
GGCTCAAGTGATTTAGGTCC+TGG 0.497025 6.3:+7205956 MS.gene62721:CDS
GAAGAAGATATTTCATCCCT+CGG 0.499062 6.3:-7204994 None:intergenic
TTAAACAATGCATCCTCAGC+AGG 0.501300 6.3:-7203931 None:intergenic
CAATATTCGCATACTGTCAA+AGG 0.501644 6.3:+7205563 MS.gene62721:CDS
AGAATTTACGTAGTGAAACT+GGG 0.506241 6.3:+7204088 MS.gene62721:CDS
TCACTCATGGGTCCAACTGC+AGG 0.507662 6.3:+7204877 MS.gene62721:CDS
TAGAAACTAAGGCTAAGATT+AGG 0.513118 6.3:+7203809 MS.gene62721:CDS
GAAACCTTGGCGGCGTGATA+GGG 0.514629 6.3:+7205052 MS.gene62721:CDS
AGAGGAGCCATCCCCACAAT+CGG 0.517053 6.3:-7204904 None:intergenic
CATTCATATTCAAGTGGCTA+TGG 0.517078 6.3:+7205932 MS.gene62721:CDS
ATTGGCTGCCTTATTGGTAA+AGG 0.517590 6.3:+7205501 MS.gene62721:CDS
ATTGGTAGTATTATTGGTAG+GGG 0.520404 6.3:+7203760 MS.gene62721:CDS
CAGCACCCTCTCTATCGAAA+AGG 0.521846 6.3:-7205808 None:intergenic
AGCACGGCTGCCTCTACGGT+TGG 0.522327 6.3:-7205393 None:intergenic
ACTGCAGGACCTCCGATTGT+GGG 0.525961 6.3:+7204892 MS.gene62721:CDS
ATAAAGGTGACACTGGTGAC+TGG 0.529820 6.3:+7204947 MS.gene62721:CDS
GTTTGTCCAACTGGAAACCT+TGG 0.534021 6.3:+7205039 MS.gene62721:CDS
AGATTGGTAGTATTATTGGT+AGG 0.534949 6.3:+7203758 MS.gene62721:CDS
TGTCCAACTGGAAACCTTGG+CGG 0.534979 6.3:+7205042 MS.gene62721:CDS
TAGGATCGGTGAGACTGTGC+CGG 0.535129 6.3:+7203828 MS.gene62721:CDS
CAGAGTGATCAGGAGGAAGA+AGG 0.537264 6.3:+7203985 MS.gene62721:CDS
TCTGGACCATCTACTGGAGC+AGG 0.538662 6.3:-7205863 None:intergenic
CCTCTTGTTGGTCCTTATGG+GGG 0.538953 6.3:+7204922 MS.gene62721:CDS
GTCTATGTACTCGGCTCCGA+GGG 0.539900 6.3:+7204978 MS.gene62721:CDS
GGTTGTGTTCTTGGAAAAGG+TGG 0.543414 6.3:+7204054 MS.gene62721:CDS
TGCTGGAGGCAGTGGCTATG+GGG 0.543670 6.3:+7206135 MS.gene62721:CDS
GGTAGTATTATTGGTAGGGG+AGG 0.545293 6.3:+7203763 MS.gene62721:CDS
ATGTTCTTAACTATGACAGT+AGG 0.545503 6.3:+7205885 MS.gene62721:CDS
CACAAGCTCATCAGATCTCA+AGG 0.546895 6.3:-7204154 None:intergenic
ATGAAAGTTATTCTTTGGGA+CGG 0.554070 6.3:+7206161 MS.gene62721:CDS
GGCTGCCTTATTGGTAAAGG+AGG 0.555181 6.3:+7205504 MS.gene62721:CDS
ACAATCGGAGGTCCTGCAGT+TGG 0.556185 6.3:-7204889 None:intergenic
TCAAATAAGGCAGGATTCTG+GGG 0.561605 6.3:+7205095 MS.gene62721:CDS
CTATTATAACTGAGATGAGA+AGG 0.563633 6.3:+7205529 MS.gene62721:CDS
CAACAGCTTAGCATTCACTT+GGG 0.570262 6.3:-7204013 None:intergenic
TCATATTCAAGTGGCTATGG+AGG 0.574440 6.3:+7205935 MS.gene62721:CDS
GGAAATAAAAGGAGGAATGG+AGG 0.578539 6.3:+7203658 MS.gene62721:CDS
GAGCATCTTTGGCAACATCA+AGG 0.578808 6.3:-7205754 None:intergenic
AGGTGATCATGACAGGGATA+GGG 0.581436 6.3:+7203678 MS.gene62721:CDS
GAGATCTGATGAGCTTGTGC+AGG 0.581694 6.3:+7204158 MS.gene62721:CDS
TGTTCTTAACTATGACAGTA+GGG 0.584516 6.3:+7205886 MS.gene62721:CDS
ACGCTTGTCACCGTCATCAA+CGG 0.584883 6.3:-7203902 None:intergenic
GCCACCACGGTCTATGTACT+CGG 0.588324 6.3:+7204969 MS.gene62721:CDS
TGGAAGCTATGCAAGTTCAC+AGG 0.592262 6.3:+7205988 MS.gene62721:CDS
TGATGATGATGAAATGGTGC+AGG 0.592383 6.3:+7205608 MS.gene62721:CDS
CTTTCCCTATCACGCCGCCA+AGG 0.595068 6.3:-7205056 None:intergenic
GGCGTGATAGGGAAAGGTGG+AGG 0.595333 6.3:+7205063 MS.gene62721:CDS
CCTTCTGTATATCCCAGTGG+TGG 0.597909 6.3:+7204853 MS.gene62721:CDS
ACGCCGCCAAGGTTTCCAGT+TGG 0.598483 6.3:-7205045 None:intergenic
CTGCAGGACCTCCGATTGTG+GGG 0.600727 6.3:+7204893 MS.gene62721:CDS
TGCTGATGATACCAACAGAC+GGG 0.600814 6.3:-7205475 None:intergenic
ATACTACCAATCTTTCTCCC+CGG 0.602117 6.3:-7203748 None:intergenic
CGCGGACATTCATATTCAAG+TGG 0.603264 6.3:+7205926 MS.gene62721:CDS
ACTAAGGCTAAGATTAGGAT+CGG 0.603797 6.3:+7203814 MS.gene62721:CDS
GTTTAAGATTCATGATAGGG+TGG 0.605100 6.3:+7203948 MS.gene62721:CDS
CAGTCTGACTATGACGGCGG+AGG 0.605462 6.3:+7203637 MS.gene62721:CDS
CTTGGCGGCGTGATAGGGAA+AGG 0.608891 6.3:+7205057 MS.gene62721:CDS
CCAAGTGAATGCTAAGCTGT+TGG 0.609071 6.3:+7204014 MS.gene62721:CDS
ACACAACCTATCTGATCAGA+CGG 0.614388 6.3:-7204039 None:intergenic
TTGGTGCCGTCTGATCAGAT+AGG 0.616736 6.3:+7204033 MS.gene62721:CDS
CAAGCGTGTGTCACCTGCTG+AGG 0.619017 6.3:+7203918 MS.gene62721:CDS
TCCGCCGTCATAGTCAGACT+GGG 0.620527 6.3:-7203635 None:intergenic
GTTTATCTGTAGCTTGCTGG+AGG 0.621253 6.3:+7206121 MS.gene62721:intron
CCCATGAGTGAACCACCACT+GGG 0.622023 6.3:-7204865 None:intergenic
TTTGAAATTCCAGATTTCTG+GGG 0.622285 6.3:+7204738 MS.gene62721:intron
TAGCTTCCATAAGTGTCACC+AGG 0.622851 6.3:-7205974 None:intergenic
GTAGAACTGGAAGGAATCCA+GGG 0.623782 6.3:-7205832 None:intergenic
CCACCACTGGGATATACAGA+AGG 0.625832 6.3:-7204853 None:intergenic
AGATTTACAGAGTGATCAGG+AGG 0.626003 6.3:+7203978 MS.gene62721:CDS
GAATATATGGTAGAACTGGA+AGG 0.628048 6.3:-7205841 None:intergenic
ACACTGGTGACTGGCCACCA+CGG 0.629129 6.3:+7204956 MS.gene62721:CDS
AACTTTCTCTCCAACCGTAG+AGG 0.630582 6.3:+7205383 MS.gene62721:CDS
GCATCGGGGTTGTAAAAGCA+CGG 0.631796 6.3:-7205409 None:intergenic
AGTAGGGATGTCAAAAGACA+TGG 0.639502 6.3:+7205902 MS.gene62721:CDS
AGTAAATGCTGAGTTCGAGA+AGG 0.640016 6.3:-7204817 None:intergenic
TCATAGTCAGACTGGGATCG+AGG 0.646653 6.3:-7203628 None:intergenic
GGAGGAAATAAAAGGAGGAA+TGG 0.646980 6.3:+7203655 MS.gene62721:CDS
AACAGCTTAGCATTCACTTG+GGG 0.647144 6.3:-7204012 None:intergenic
AGTGATCAGGAGGAAGAAGG+TGG 0.649638 6.3:+7203988 MS.gene62721:CDS
GTGCTGATGATACCAACAGA+CGG 0.649949 6.3:-7205476 None:intergenic
GTTGTGTTCTTGGAAAAGGT+GGG 0.650534 6.3:+7204055 MS.gene62721:CDS
GGCGGCGTGATAGGGAAAGG+TGG 0.656757 6.3:+7205060 MS.gene62721:CDS
GGAGCCATCCCCACAATCGG+AGG 0.661378 6.3:-7204901 None:intergenic
GGTCTATGTACTCGGCTCCG+AGG 0.667191 6.3:+7204977 MS.gene62721:CDS
GAATGGAGGTGATCATGACA+GGG 0.670403 6.3:+7203672 MS.gene62721:CDS
TCAGATCTCAAGGCACACGC+AGG 0.670810 6.3:-7204144 None:intergenic
TCCCAGTCTGACTATGACGG+CGG 0.676497 6.3:+7203634 MS.gene62721:CDS
GTTCCTTCTGTATATCCCAG+TGG 0.681069 6.3:+7204850 MS.gene62721:CDS
GAGACTAATACCGTTGATGA+CGG 0.687011 6.3:+7203892 MS.gene62721:CDS
CGATCCCAGTCTGACTATGA+CGG 0.688162 6.3:+7203631 MS.gene62721:CDS
ACAACACGCTCATCGCACCC+CGG 0.688306 6.3:-7203847 None:intergenic
GAATTTACGTAGTGAAACTG+GGG 0.692457 6.3:+7204089 MS.gene62721:CDS
ACGGCGGAGGAAATAAAAGG+AGG 0.710850 6.3:+7203650 MS.gene62721:CDS
GGATCGGTGAGACTGTGCCG+GGG 0.718334 6.3:+7203830 MS.gene62721:CDS
GATGTCAAAAGACATGGACG+CGG 0.735664 6.3:+7205908 MS.gene62721:CDS
GCCGAGTACATAGACCGTGG+TGG 0.741429 6.3:-7204970 None:intergenic
GGAGCCGAGTACATAGACCG+TGG 0.779893 6.3:-7204973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAATATTATTTACCA+AGG - chr6.3:7204251-7204270 None:intergenic 10.0%
!!! ATAATATTTTATAATGTTAG+CGG + chr6.3:7204257-7204276 MS.gene62721:intron 10.0%
!! TTTCACATATTAAGAAAAAT+AGG - chr6.3:7204489-7204508 None:intergenic 15.0%
!!! TTTTTCAAATATATCCATAA+GGG + chr6.3:7204382-7204401 MS.gene62721:intron 15.0%
!!! TTTTTTCAAATATATCCATA+AGG + chr6.3:7204381-7204400 MS.gene62721:intron 15.0%
!! AAATAACATTTCCATTTCAT+TGG - chr6.3:7205277-7205296 None:intergenic 20.0%
!! CAAAGAGAAAGAAATAATTA+TGG + chr6.3:7203598-7203617 MS.gene62721:CDS 20.0%
!! TGTTCTTCAAAAATCAAATT+TGG - chr6.3:7206027-7206046 None:intergenic 20.0%
!!! AAATCAAACTTTTACATTCA+GGG - chr6.3:7204335-7204354 None:intergenic 20.0%
!!! ATTGTTTAAGATTCATGATA+GGG + chr6.3:7203945-7203964 MS.gene62721:CDS 20.0%
!!! ATTTATTAATTTTGCTTCCT+TGG + chr6.3:7204231-7204250 MS.gene62721:intron 20.0%
!!! TTATAATGAGTTTTCCTTAT+TGG + chr6.3:7204714-7204733 MS.gene62721:intron 20.0%
!!! TTTTTGTTCTATTACAATTG+TGG + chr6.3:7205216-7205235 MS.gene62721:intron 20.0%
! AAAAATGAAAAATTGTCCAC+GGG - chr6.3:7205201-7205220 None:intergenic 25.0%
! AATAACCATTTCAACTAAAG+AGG + chr6.3:7205161-7205180 MS.gene62721:CDS 25.0%
! ATATGTGAAAATTGCAAAAG+AGG + chr6.3:7204499-7204518 MS.gene62721:intron 25.0%
! CAAAAATGAAAAATTGTCCA+CGG - chr6.3:7205202-7205221 None:intergenic 25.0%
! CATAATAAATCAAATAAGGC+AGG + chr6.3:7205086-7205105 MS.gene62721:CDS 25.0%
! GACTATGAAAGTTATTCTTT+GGG + chr6.3:7206157-7206176 MS.gene62721:CDS 25.0%
! GAGGCATAATAAATCAAATA+AGG + chr6.3:7205082-7205101 MS.gene62721:CDS 25.0%
! TAGGTTATTCATACACAAAA+TGG + chr6.3:7204440-7204459 MS.gene62721:intron 25.0%
!! AAAAGAATTTTCAGTTCGAT+TGG + chr6.3:7205017-7205036 MS.gene62721:CDS 25.0%
!! AAAATTTTGTCCTATAATGC+TGG + chr6.3:7205692-7205711 MS.gene62721:intron 25.0%
!! AGAAAGATTGGTAGTATTAT+TGG + chr6.3:7203754-7203773 MS.gene62721:CDS 25.0%
!! CATTGTTTAAGATTCATGAT+AGG + chr6.3:7203944-7203963 MS.gene62721:CDS 25.0%
!! GAAATCAAACTTTTACATTC+AGG - chr6.3:7204336-7204355 None:intergenic 25.0%
!!! ACTTTTTTTCTCACTTTGTT+TGG + chr6.3:7205638-7205657 MS.gene62721:intron 25.0%
!!! TTTTGAAATTCCAGATTTCT+GGG + chr6.3:7204737-7204756 MS.gene62721:intron 25.0%
AAATATATCCATAAGGGTCT+TGG + chr6.3:7204388-7204407 MS.gene62721:intron 30.0%
ACATTTCCATTTCATTGGAA+CGG - chr6.3:7205272-7205291 None:intergenic 30.0%
AGAATTTACGTAGTGAAACT+GGG + chr6.3:7204088-7204107 MS.gene62721:CDS 30.0%
ATGTTCTTAACTATGACAGT+AGG + chr6.3:7205885-7205904 MS.gene62721:CDS 30.0%
CAAAAGTAGTAATTGCTATC+TGG + chr6.3:7204544-7204563 MS.gene62721:intron 30.0%
CGGAACAATATTACAAACAA+CGG - chr6.3:7206102-7206121 None:intergenic 30.0%
CTATTATAACTGAGATGAGA+AGG + chr6.3:7205529-7205548 MS.gene62721:CDS 30.0%
CTGCTTTCTTGATTAGATTT+CGG + chr6.3:7205727-7205746 MS.gene62721:intron 30.0%
CTGGAATTTCAAAACCAATA+AGG - chr6.3:7204731-7204750 None:intergenic 30.0%
GAAAAAAGTGAAAGAGATTC+TGG + chr6.3:7205435-7205454 MS.gene62721:CDS 30.0%
GCAAAAGAGGCTTATAATAA+GGG + chr6.3:7204512-7204531 MS.gene62721:intron 30.0%
GGACTATGAAAGTTATTCTT+TGG + chr6.3:7206156-7206175 MS.gene62721:CDS 30.0%
TAGAAACTAAGGCTAAGATT+AGG + chr6.3:7203809-7203828 MS.gene62721:CDS 30.0%
TCTAATCAAGAAAGCAGATA+CGG - chr6.3:7205724-7205743 None:intergenic 30.0%
TGAGATAGTTAAGCAATTGA+GGG + chr6.3:7203786-7203805 MS.gene62721:CDS 30.0%
TGCAAAAGAGGCTTATAATA+AGG + chr6.3:7204511-7204530 MS.gene62721:intron 30.0%
TGCTTTCTTGATTAGATTTC+GGG + chr6.3:7205728-7205747 MS.gene62721:intron 30.0%
TGTTCTTAACTATGACAGTA+GGG + chr6.3:7205886-7205905 MS.gene62721:CDS 30.0%
TTCAAAAGGGGCTATATTTA+GGG - chr6.3:7204301-7204320 None:intergenic 30.0%
TTTCAAAAGGGGCTATATTT+AGG - chr6.3:7204302-7204321 None:intergenic 30.0%
! AGATTGGTAGTATTATTGGT+AGG + chr6.3:7203758-7203777 MS.gene62721:CDS 30.0%
! ATGAAAGTTATTCTTTGGGA+CGG + chr6.3:7206161-7206180 MS.gene62721:CDS 30.0%
! ATTGGTAGTATTATTGGTAG+GGG + chr6.3:7203760-7203779 MS.gene62721:CDS 30.0%
! GATTGGTAGTATTATTGGTA+GGG + chr6.3:7203759-7203778 MS.gene62721:CDS 30.0%
! TCATCATCAGAAGCAATTTT+AGG - chr6.3:7205597-7205616 None:intergenic 30.0%
! TTTGAAATTCCAGATTTCTG+GGG + chr6.3:7204738-7204757 MS.gene62721:intron 30.0%
!! AAAGTTGATAGTTCTGCAAA+AGG + chr6.3:7205126-7205145 MS.gene62721:CDS 30.0%
!! AATTACTACTTTTGTCCCAT+TGG - chr6.3:7204598-7204617 None:intergenic 30.0%
!! AGTACTTTTTATCACACAGA+AGG - chr6.3:7205672-7205691 None:intergenic 30.0%
!! ATTACTACTTTTGTCCCATT+GGG - chr6.3:7204597-7204616 None:intergenic 30.0%
!! GAAATGGAAATGTTATTTCC+TGG + chr6.3:7205279-7205298 MS.gene62721:intron 30.0%
!! GACAAATTGCTTTTCAAAAG+GGG - chr6.3:7204313-7204332 None:intergenic 30.0%
!! GGACAAATTGCTTTTCAAAA+GGG - chr6.3:7204314-7204333 None:intergenic 30.0%
!!! GTTTTGAAATTCCAGATTTC+TGG + chr6.3:7204736-7204755 MS.gene62721:intron 30.0%
!!! TTTCACTTTTTTCACTGCAT+CGG - chr6.3:7205428-7205447 None:intergenic 30.0%
AAACAACGGATGAGAGATAA+TGG - chr6.3:7206088-7206107 None:intergenic 35.0%
AAGAGGCTTATAATAAGGGA+TGG + chr6.3:7204516-7204535 MS.gene62721:intron 35.0%
AATCAAATAAGGCAGGATTC+TGG + chr6.3:7205093-7205112 MS.gene62721:CDS 35.0%
AATTTGCCGTTCCAATGAAA+TGG + chr6.3:7205263-7205282 MS.gene62721:intron 35.0%
ACAAACAAAAATTGCAAGCC+AGG - chr6.3:7205300-7205319 None:intergenic 35.0%
ACTAAGGCTAAGATTAGGAT+CGG + chr6.3:7203814-7203833 MS.gene62721:CDS 35.0%
ATAGGTTGTGTTCTTGGAAA+AGG + chr6.3:7204051-7204070 MS.gene62721:CDS 35.0%
ATCAAATAAGGCAGGATTCT+GGG + chr6.3:7205094-7205113 MS.gene62721:CDS 35.0%
CAATATTCGCATACTGTCAA+AGG + chr6.3:7205563-7205582 MS.gene62721:CDS 35.0%
CAGAATTTACGTAGTGAAAC+TGG + chr6.3:7204087-7204106 MS.gene62721:CDS 35.0%
CATTCATATTCAAGTGGCTA+TGG + chr6.3:7205932-7205951 MS.gene62721:CDS 35.0%
CTAATCAAGAAAGCAGATAC+GGG - chr6.3:7205723-7205742 None:intergenic 35.0%
CTATTACAATTGTGGTTGTG+AGG + chr6.3:7205224-7205243 MS.gene62721:intron 35.0%
CTGTCATAGTTAAGAACATC+TGG - chr6.3:7205884-7205903 None:intergenic 35.0%
CTTTGACAGTATGCGAATAT+TGG - chr6.3:7205565-7205584 None:intergenic 35.0%
GAAGAAGATATTTCATCCCT+CGG - chr6.3:7204997-7205016 None:intergenic 35.0%
GAATATATGGTAGAACTGGA+AGG - chr6.3:7205844-7205863 None:intergenic 35.0%
GAATTTACGTAGTGAAACTG+GGG + chr6.3:7204089-7204108 MS.gene62721:CDS 35.0%
GGAGCAGTTTGTGATTAATA+AGG + chr6.3:7203699-7203718 MS.gene62721:CDS 35.0%
GTGAGATAGTTAAGCAATTG+AGG + chr6.3:7203785-7203804 MS.gene62721:CDS 35.0%
GTTCACCTCTTTAGTTGAAA+TGG - chr6.3:7205169-7205188 None:intergenic 35.0%
TAAGCTCATTCATACACAGT+AGG + chr6.3:7204421-7204440 MS.gene62721:intron 35.0%
TAGATCCTCCTTTACCAATA+AGG - chr6.3:7205512-7205531 None:intergenic 35.0%
TGAAGATTTACAGAGTGATC+AGG + chr6.3:7203975-7203994 MS.gene62721:CDS 35.0%
TGCAGAACTATCAACTTTGA+TGG - chr6.3:7205124-7205143 None:intergenic 35.0%
! GTTTAAGATTCATGATAGGG+TGG + chr6.3:7203948-7203967 MS.gene62721:CDS 35.0%
! TGCTTCTGATGATGATGAAA+TGG + chr6.3:7205602-7205621 MS.gene62721:CDS 35.0%
! TGTTTTTCGCTATTTGTGTC+CGG + chr6.3:7203729-7203748 MS.gene62721:CDS 35.0%
!! GGGACAAATTGCTTTTCAAA+AGG - chr6.3:7204315-7204334 None:intergenic 35.0%
!! TTACTACTTTTGTCCCATTG+GGG - chr6.3:7204596-7204615 None:intergenic 35.0%
!!! TTCACTTTTTTCACTGCATC+GGG - chr6.3:7205427-7205446 None:intergenic 35.0%
AACAGCTTAGCATTCACTTG+GGG - chr6.3:7204015-7204034 None:intergenic 40.0%
ACACAACCTATCTGATCAGA+CGG - chr6.3:7204042-7204061 None:intergenic 40.0%
AGATTTACAGAGTGATCAGG+AGG + chr6.3:7203978-7203997 MS.gene62721:CDS 40.0%
AGGCTTATAATAAGGGATGG+AGG + chr6.3:7204519-7204538 MS.gene62721:intron 40.0%
AGTAAATGCTGAGTTCGAGA+AGG - chr6.3:7204820-7204839 None:intergenic 40.0%
AGTAGGGATGTCAAAAGACA+TGG + chr6.3:7205902-7205921 MS.gene62721:CDS 40.0%
ATACTACCAATCTTTCTCCC+CGG - chr6.3:7203751-7203770 None:intergenic 40.0%
ATGATGAAATGGTGCAGGTA+AGG + chr6.3:7205613-7205632 MS.gene62721:intron 40.0%
CAACAGCTTAGCATTCACTT+GGG - chr6.3:7204016-7204035 None:intergenic 40.0%
GATCAGATAGGTTGTGTTCT+TGG + chr6.3:7204045-7204064 MS.gene62721:CDS 40.0%
GCAATTGAGGGTAGAAACTA+AGG + chr6.3:7203798-7203817 MS.gene62721:CDS 40.0%
GCAGGAATATATGGTAGAAC+TGG - chr6.3:7205848-7205867 None:intergenic 40.0%
GCTATATTTAGGGATAGAGG+TGG - chr6.3:7204291-7204310 None:intergenic 40.0%
GGAAATAAAAGGAGGAATGG+AGG + chr6.3:7203658-7203677 MS.gene62721:CDS 40.0%
GGAGGAAATAAAAGGAGGAA+TGG + chr6.3:7203655-7203674 MS.gene62721:CDS 40.0%
GGCTCAGATTCGTATTCTTA+AGG + chr6.3:7204110-7204129 MS.gene62721:CDS 40.0%
GGCTTATAATAAGGGATGGA+GGG + chr6.3:7204520-7204539 MS.gene62721:intron 40.0%
GTTGTGTTCTTGGAAAAGGT+GGG + chr6.3:7204055-7204074 MS.gene62721:CDS 40.0%
TATATTCCTGCTCCAGTAGA+TGG + chr6.3:7205857-7205876 MS.gene62721:CDS 40.0%
TATGGAGGCTCAAGTGATTT+AGG + chr6.3:7205950-7205969 MS.gene62721:CDS 40.0%
TCAAATAAGGCAGGATTCTG+GGG + chr6.3:7205095-7205114 MS.gene62721:CDS 40.0%
TCACCTTTATATCCCCCATA+AGG - chr6.3:7204937-7204956 None:intergenic 40.0%
TCATATTCAAGTGGCTATGG+AGG + chr6.3:7205935-7205954 MS.gene62721:CDS 40.0%
TCCAGCAAGCTACAGATAAA+CGG - chr6.3:7206122-7206141 None:intergenic 40.0%
TCTACTGGAGCAGGAATATA+TGG - chr6.3:7205857-7205876 None:intergenic 40.0%
TCTCGAACTCAGCATTTACT+TGG + chr6.3:7204820-7204839 MS.gene62721:CDS 40.0%
TGATGAAATGGTGCAGGTAA+GGG + chr6.3:7205614-7205633 MS.gene62721:intron 40.0%
TTAAACAATGCATCCTCAGC+AGG - chr6.3:7203934-7203953 None:intergenic 40.0%
TTCATCTTCCAAGACCCTTA+TGG - chr6.3:7204399-7204418 None:intergenic 40.0%
TTGGTATCATCAGCACGAAT+TGG + chr6.3:7205483-7205502 MS.gene62721:CDS 40.0%
! AGCAAACCTTTTCGATAGAG+AGG + chr6.3:7205802-7205821 MS.gene62721:CDS 40.0%
! ATTGGCTGCCTTATTGGTAA+AGG + chr6.3:7205501-7205520 MS.gene62721:CDS 40.0%
! GAGACTAATACCGTTGATGA+CGG + chr6.3:7203892-7203911 MS.gene62721:CDS 40.0%
! GCAAACCTTTTCGATAGAGA+GGG + chr6.3:7205803-7205822 MS.gene62721:CDS 40.0%
! GTTTTTCGCTATTTGTGTCC+GGG + chr6.3:7203730-7203749 MS.gene62721:CDS 40.0%
! TGATGATGATGAAATGGTGC+AGG + chr6.3:7205608-7205627 MS.gene62721:CDS 40.0%
! TTTTTCGCTATTTGTGTCCG+GGG + chr6.3:7203731-7203750 MS.gene62721:CDS 40.0%
!! AACTTGCACAAGAGCATCTT+TGG - chr6.3:7205768-7205787 None:intergenic 40.0%
!!! TCACTTTTTTCACTGCATCG+GGG - chr6.3:7205426-7205445 None:intergenic 40.0%
AACTTTCTCTCCAACCGTAG+AGG + chr6.3:7205383-7205402 MS.gene62721:CDS 45.0%
AGAACATCTGGACCATCTAC+TGG - chr6.3:7205872-7205891 None:intergenic 45.0%
AGGTGATCATGACAGGGATA+GGG + chr6.3:7203678-7203697 MS.gene62721:CDS 45.0%
ATAAAGGTGACACTGGTGAC+TGG + chr6.3:7204947-7204966 MS.gene62721:CDS 45.0%
ATGACGGCGGAGGAAATAAA+AGG + chr6.3:7203647-7203666 MS.gene62721:CDS 45.0%
CACAAGCTCATCAGATCTCA+AGG - chr6.3:7204157-7204176 None:intergenic 45.0%
CCAACAGCTTAGCATTCACT+TGG - chr6.3:7204017-7204036 None:intergenic 45.0%
CCAAGTGAATGCTAAGCTGT+TGG + chr6.3:7204014-7204033 MS.gene62721:CDS 45.0%
CGCGGACATTCATATTCAAG+TGG + chr6.3:7205926-7205945 MS.gene62721:CDS 45.0%
CTCCTCTTGTTGGTCCTTAT+GGG + chr6.3:7204920-7204939 MS.gene62721:CDS 45.0%
GAATGGAGGTGATCATGACA+GGG + chr6.3:7203672-7203691 MS.gene62721:CDS 45.0%
GAGCATCTTTGGCAACATCA+AGG - chr6.3:7205757-7205776 None:intergenic 45.0%
GATGTCAAAAGACATGGACG+CGG + chr6.3:7205908-7205927 MS.gene62721:CDS 45.0%
GCTTGTGCAGGTAAGTTAGA+TGG + chr6.3:7204170-7204189 MS.gene62721:intron 45.0%
GGATGCTGCAGTTGTGAAAA+AGG + chr6.3:7204759-7204778 MS.gene62721:CDS 45.0%
GGGGCTATATTTAGGGATAG+AGG - chr6.3:7204294-7204313 None:intergenic 45.0%
GGTAGTATTATTGGTAGGGG+AGG + chr6.3:7203763-7203782 MS.gene62721:CDS 45.0%
GGTCCTTATGGGGGATATAA+AGG + chr6.3:7204931-7204950 MS.gene62721:CDS 45.0%
GGTGAACTATTAATCACCCG+TGG + chr6.3:7205182-7205201 MS.gene62721:intron 45.0%
GGTTGTGTTCTTGGAAAAGG+TGG + chr6.3:7204054-7204073 MS.gene62721:CDS 45.0%
GTAGAACTGGAAGGAATCCA+GGG - chr6.3:7205835-7205854 None:intergenic 45.0%
GTCCAACAATTGTCCCCAAT+GGG + chr6.3:7204580-7204599 MS.gene62721:intron 45.0%
GTTCCTTCTGTATATCCCAG+TGG + chr6.3:7204850-7204869 MS.gene62721:CDS 45.0%
GTTTGTCCAACTGGAAACCT+TGG + chr6.3:7205039-7205058 MS.gene62721:CDS 45.0%
TAGCTTCCATAAGTGTCACC+AGG - chr6.3:7205977-7205996 None:intergenic 45.0%
TCCTCTTGTTGGTCCTTATG+GGG + chr6.3:7204921-7204940 MS.gene62721:CDS 45.0%
TGCTGATGATACCAACAGAC+GGG - chr6.3:7205478-7205497 None:intergenic 45.0%
TGGAAGCTATGCAAGTTCAC+AGG + chr6.3:7205988-7206007 MS.gene62721:CDS 45.0%
TGGGACGGAATAGTACTGTT+TGG + chr6.3:7206176-7206195 MS.gene62721:CDS 45.0%
TGTCCAACAATTGTCCCCAA+TGG + chr6.3:7204579-7204598 MS.gene62721:intron 45.0%
TTAGGTCCTGGTGACACTTA+TGG + chr6.3:7205968-7205987 MS.gene62721:CDS 45.0%
! CTCTTTTACTACCCGTCTGT+TGG + chr6.3:7205464-7205483 MS.gene62721:CDS 45.0%
! GTGCTGATGATACCAACAGA+CGG - chr6.3:7205479-7205498 None:intergenic 45.0%
! TCCGTTTATCTGTAGCTTGC+TGG + chr6.3:7206118-7206137 MS.gene62721:intron 45.0%
!! GTTCGATTGGTTTGTCCAAC+TGG + chr6.3:7205030-7205049 MS.gene62721:CDS 45.0%
!! GTTTATCTGTAGCTTGCTGG+AGG + chr6.3:7206121-7206140 MS.gene62721:intron 45.0%
ACGCTTGTCACCGTCATCAA+CGG - chr6.3:7203905-7203924 None:intergenic 50.0%
ACGGCGGAGGAAATAAAAGG+AGG + chr6.3:7203650-7203669 MS.gene62721:CDS 50.0%
ACGGGCAAAGCCAGCATTAT+AGG - chr6.3:7205705-7205724 None:intergenic 50.0%
AGTGATCAGGAGGAAGAAGG+TGG + chr6.3:7203988-7204007 MS.gene62721:CDS 50.0%
CAGAGTGATCAGGAGGAAGA+AGG + chr6.3:7203985-7204004 MS.gene62721:CDS 50.0%
CAGCACCCTCTCTATCGAAA+AGG - chr6.3:7205811-7205830 None:intergenic 50.0%
CCACCACTGGGATATACAGA+AGG - chr6.3:7204856-7204875 None:intergenic 50.0%
CCTCTTGTTGGTCCTTATGG+GGG + chr6.3:7204922-7204941 MS.gene62721:CDS 50.0%
CCTTCTGTATATCCCAGTGG+TGG + chr6.3:7204853-7204872 MS.gene62721:CDS 50.0%
CGATCCCAGTCTGACTATGA+CGG + chr6.3:7203631-7203650 MS.gene62721:CDS 50.0%
GAGATCTGATGAGCTTGTGC+AGG + chr6.3:7204158-7204177 MS.gene62721:CDS 50.0%
GAGGTGATCATGACAGGGAT+AGG + chr6.3:7203677-7203696 MS.gene62721:CDS 50.0%
GCACGAATTGGCTGCCTTAT+TGG + chr6.3:7205495-7205514 MS.gene62721:CDS 50.0%
GCATCGGGGTTGTAAAAGCA+CGG - chr6.3:7205412-7205431 None:intergenic 50.0%
GCTCCTCTTGTTGGTCCTTA+TGG + chr6.3:7204919-7204938 MS.gene62721:CDS 50.0%
GGAATGGAGGTGATCATGAC+AGG + chr6.3:7203671-7203690 MS.gene62721:CDS 50.0%
GGCTCAAGTGATTTAGGTCC+TGG + chr6.3:7205956-7205975 MS.gene62721:CDS 50.0%
GGGGGATATAAAGGTGACAC+TGG + chr6.3:7204940-7204959 MS.gene62721:CDS 50.0%
GGTAGAACTGGAAGGAATCC+AGG - chr6.3:7205836-7205855 None:intergenic 50.0%
GTCCCATTGGGGACAATTGT+TGG - chr6.3:7204585-7204604 None:intergenic 50.0%
TCATAGTCAGACTGGGATCG+AGG - chr6.3:7203631-7203650 None:intergenic 50.0%
TGTCCAACTGGAAACCTTGG+CGG + chr6.3:7205042-7205061 MS.gene62721:CDS 50.0%
TTGTGTCCGGGGAGAAAGAT+TGG + chr6.3:7203742-7203761 MS.gene62721:CDS 50.0%
! GGCTGCCTTATTGGTAAAGG+AGG + chr6.3:7205504-7205523 MS.gene62721:CDS 50.0%
! TAAAAGCACGGCTGCCTCTA+CGG - chr6.3:7205400-7205419 None:intergenic 50.0%
!! TTGGTGCCGTCTGATCAGAT+AGG + chr6.3:7204033-7204052 MS.gene62721:CDS 50.0%
AACTGCAGGACCTCCGATTG+TGG + chr6.3:7204891-7204910 MS.gene62721:CDS 55.0%
ACAATCGGAGGTCCTGCAGT+TGG - chr6.3:7204892-7204911 None:intergenic 55.0%
ACCCATGAGTGAACCACCAC+TGG - chr6.3:7204869-7204888 None:intergenic 55.0%
ACTGCAGGACCTCCGATTGT+GGG + chr6.3:7204892-7204911 MS.gene62721:CDS 55.0%
AGAGGAGCCATCCCCACAAT+CGG - chr6.3:7204907-7204926 None:intergenic 55.0%
CCCAGTGGTGGTTCACTCAT+GGG + chr6.3:7204865-7204884 MS.gene62721:CDS 55.0%
CCCATGAGTGAACCACCACT+GGG - chr6.3:7204868-7204887 None:intergenic 55.0%
CCCCCATAAGGACCAACAAG+AGG - chr6.3:7204925-7204944 None:intergenic 55.0%
CTGCAGCATCCCCAGAAATC+TGG - chr6.3:7204750-7204769 None:intergenic 55.0%
GAAACCTTGGCGGCGTGATA+GGG + chr6.3:7205052-7205071 MS.gene62721:CDS 55.0%
GCCACCACGGTCTATGTACT+CGG + chr6.3:7204969-7204988 MS.gene62721:CDS 55.0%
GTCTATGTACTCGGCTCCGA+GGG + chr6.3:7204978-7204997 MS.gene62721:CDS 55.0%
TAGGATCGGTGAGACTGTGC+CGG + chr6.3:7203828-7203847 MS.gene62721:CDS 55.0%
TCACTCATGGGTCCAACTGC+AGG + chr6.3:7204877-7204896 MS.gene62721:CDS 55.0%
TCAGATCTCAAGGCACACGC+AGG - chr6.3:7204147-7204166 None:intergenic 55.0%
TCCCAGTCTGACTATGACGG+CGG + chr6.3:7203634-7203653 MS.gene62721:CDS 55.0%
TCCCAGTGGTGGTTCACTCA+TGG + chr6.3:7204864-7204883 MS.gene62721:CDS 55.0%
TCCGCCGTCATAGTCAGACT+GGG - chr6.3:7203638-7203657 None:intergenic 55.0%
TCTGGACCATCTACTGGAGC+AGG - chr6.3:7205866-7205885 None:intergenic 55.0%
TTGCTGGAGGCAGTGGCTAT+GGG + chr6.3:7206134-7206153 MS.gene62721:CDS 55.0%
ACAACACGCTCATCGCACCC+CGG - chr6.3:7203850-7203869 None:intergenic 60.0%
ACGCCGCCAAGGTTTCCAGT+TGG - chr6.3:7205048-7205067 None:intergenic 60.0%
AGGACCTCCGATTGTGGGGA+TGG + chr6.3:7204897-7204916 MS.gene62721:CDS 60.0%
AGGATCGGTGAGACTGTGCC+GGG + chr6.3:7203829-7203848 MS.gene62721:CDS 60.0%
CAAGCGTGTGTCACCTGCTG+AGG + chr6.3:7203918-7203937 MS.gene62721:CDS 60.0%
CAGTCTGACTATGACGGCGG+AGG + chr6.3:7203637-7203656 MS.gene62721:CDS 60.0%
CTCCGCCGTCATAGTCAGAC+TGG - chr6.3:7203639-7203658 None:intergenic 60.0%
CTGCAGGACCTCCGATTGTG+GGG + chr6.3:7204893-7204912 MS.gene62721:CDS 60.0%
CTTGCTGGAGGCAGTGGCTA+TGG + chr6.3:7206133-7206152 MS.gene62721:CDS 60.0%
CTTGGCGGCGTGATAGGGAA+AGG + chr6.3:7205057-7205076 MS.gene62721:CDS 60.0%
CTTTCCCTATCACGCCGCCA+AGG - chr6.3:7205059-7205078 None:intergenic 60.0%
GCCGAGTACATAGACCGTGG+TGG - chr6.3:7204973-7204992 None:intergenic 60.0%
GGAAACCTTGGCGGCGTGAT+AGG + chr6.3:7205051-7205070 MS.gene62721:CDS 60.0%
GGAGCCGAGTACATAGACCG+TGG - chr6.3:7204976-7204995 None:intergenic 60.0%
GGCGTGATAGGGAAAGGTGG+AGG + chr6.3:7205063-7205082 MS.gene62721:CDS 60.0%
GGTCTATGTACTCGGCTCCG+AGG + chr6.3:7204977-7204996 MS.gene62721:CDS 60.0%
GTGGGGATGGCTCCTCTTGT+TGG + chr6.3:7204910-7204929 MS.gene62721:CDS 60.0%
TGCTGGAGGCAGTGGCTATG+GGG + chr6.3:7206135-7206154 MS.gene62721:CDS 60.0%
! ACACTGGTGACTGGCCACCA+CGG + chr6.3:7204956-7204975 MS.gene62721:CDS 60.0%
!! CTGTAGCTTGCTGGAGGCAG+TGG + chr6.3:7206127-7206146 MS.gene62721:intron 60.0%
!! GATAGAGAGGGTGCTGTCCC+TGG + chr6.3:7205815-7205834 MS.gene62721:CDS 60.0%
AGCACGGCTGCCTCTACGGT+TGG - chr6.3:7205396-7205415 None:intergenic 65.0%
GGAGCCATCCCCACAATCGG+AGG - chr6.3:7204904-7204923 None:intergenic 65.0%
GGATCGGTGAGACTGTGCCG+GGG + chr6.3:7203830-7203849 MS.gene62721:CDS 65.0%
GGCGGCGTGATAGGGAAAGG+TGG + chr6.3:7205060-7205079 MS.gene62721:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 7203589 7206201 7203589 ID=MS.gene62721
chr6.3 mRNA 7203589 7206201 7203589 ID=MS.gene62721.t1;Parent=MS.gene62721
chr6.3 exon 7203589 7204179 7203589 ID=MS.gene62721.t1.exon1;Parent=MS.gene62721.t1
chr6.3 CDS 7203589 7204179 7203589 ID=cds.MS.gene62721.t1;Parent=MS.gene62721.t1
chr6.3 exon 7204751 7205182 7204751 ID=MS.gene62721.t1.exon2;Parent=MS.gene62721.t1
chr6.3 CDS 7204751 7205182 7204751 ID=cds.MS.gene62721.t1;Parent=MS.gene62721.t1
chr6.3 exon 7205372 7205629 7205372 ID=MS.gene62721.t1.exon3;Parent=MS.gene62721.t1
chr6.3 CDS 7205372 7205629 7205372 ID=cds.MS.gene62721.t1;Parent=MS.gene62721.t1
chr6.3 exon 7205743 7206009 7205743 ID=MS.gene62721.t1.exon4;Parent=MS.gene62721.t1
chr6.3 CDS 7205743 7206009 7205743 ID=cds.MS.gene62721.t1;Parent=MS.gene62721.t1
chr6.3 exon 7206133 7206201 7206133 ID=MS.gene62721.t1.exon5;Parent=MS.gene62721.t1
chr6.3 CDS 7206133 7206201 7206133 ID=cds.MS.gene62721.t1;Parent=MS.gene62721.t1
Gene Sequence

>MS.gene62721

ATGGGTGGTCAAAGAGAAAGAAATAATTATGGTAAGCGTCCTCGATCCCAGTCTGACTATGACGGCGGAGGAAATAAAAGGAGGAATGGAGGTGATCATGACAGGGATAGGGAGCAGTTTGTGATTAATAAGGAAGATACTGTTTTTCGCTATTTGTGTCCGGGGAGAAAGATTGGTAGTATTATTGGTAGGGGAGGTGAGATAGTTAAGCAATTGAGGGTAGAAACTAAGGCTAAGATTAGGATCGGTGAGACTGTGCCGGGGTGCGATGAGCGTGTTGTTACTGTCTACAGTTCAAGTGATGAGACTAATACCGTTGATGACGGTGACAAGCGTGTGTCACCTGCTGAGGATGCATTGTTTAAGATTCATGATAGGGTGGTTGCTGAAGATTTACAGAGTGATCAGGAGGAAGAAGGTGGTCCCCAAGTGAATGCTAAGCTGTTGGTGCCGTCTGATCAGATAGGTTGTGTTCTTGGAAAAGGTGGGCAGATAGTTCAGAATTTACGTAGTGAAACTGGGGCTCAGATTCGTATTCTTAAGGATGATCACGTGCCTGCGTGTGCCTTGAGATCTGATGAGCTTGTGCAGGTAAGTTAGATGGCATTTTATTAGAATTATGTTATACTTATGATTCTTCACATTTATTAATTTTGCTTCCTTGGTAAATAATATTTTATAATGTTAGCGGTTTACTTACCACCTCTATCCCTAAATATAGCCCCTTTTGAAAAGCAATTTGTCCCTGAATGTAAAAGTTTGATTTCAGATTACTAGATACATTTATTATTATTTTTTCAAATATATCCATAAGGGTCTTGGAAGATGAATTTAAGCTCATTCATACACAGTAGGTTATTCATACACAAAATGGACACACTAACTAGTAATACACTACCTATTTTTCTTAATATGTGAAAATTGCAAAAGAGGCTTATAATAAGGGATGGAGGGACAAAAGTAGTAATTGCTATCTGGAAGATTTGATTTTGTCCAACAATTGTCCCCAATGGGACAAAAGTAGTAATTGCAGTAGTTGTCATGACAAATTTTTAGTCAGAGTTTGCTTATATGAATTTTAAAATACTGTTATATATGAGCTGAAAAAGTATCATATATTTTTGCTTATAATGAGTTTTCCTTATTGGTTTTGAAATTCCAGATTTCTGGGGATGCTGCAGTTGTGAAAAAGGCTTTGCATCAAATTGCATCTCGACTTCATCATAATCCTTCTCGAACTCAGCATTTACTTGGTTCTGCTGTTCCTTCTGTATATCCCAGTGGTGGTTCACTCATGGGTCCAACTGCAGGACCTCCGATTGTGGGGATGGCTCCTCTTGTTGGTCCTTATGGGGGATATAAAGGTGACACTGGTGACTGGCCACCACGGTCTATGTACTCGGCTCCGAGGGATGAAATATCTTCTTCAAAAGAATTTTCAGTTCGATTGGTTTGTCCAACTGGAAACCTTGGCGGCGTGATAGGGAAAGGTGGAGGCATAATAAATCAAATAAGGCAGGATTCTGGGGCAACCATCAAAGTTGATAGTTCTGCAAAAGGAGATGAGTGCTTAATAACCATTTCAACTAAAGAGGTGAACTATTAATCACCCGTGGACAATTTTTCATTTTTGTTCTATTACAATTGTGGTTGTGAGGTTTGATAAAATATGCTAATTTGCCGTTCCAATGAAATGGAAATGTTATTTCCTGGCTTGCAATTTTTGTTTGTCTTCAAAAATTGATTTCTGTGTATTAATATTTTCTGAGTTGTGCTAATACAGTTCTTTGAAGAAACTTTCTCTCCAACCGTAGAGGCAGCCGTGCTTTTACAACCCCGATGCAGTGAAAAAAGTGAAAGAGATTCTGGAATCATCTCTTTTACTACCCGTCTGTTGGTATCATCAGCACGAATTGGCTGCCTTATTGGTAAAGGAGGATCTATTATAACTGAGATGAGAAGGCTTACAAAATCCAATATTCGCATACTGTCAAAGGAAAATCTTCCTAAAATTGCTTCTGATGATGATGAAATGGTGCAGGTAAGGGTACTTTTTTTCTCACTTTGTTTGGTAACGTTGCCTTCTGTGTGATAAAAAGTACTAAAATTTTGTCCTATAATGCTGGCTTTGCCCGTATCTGCTTTCTTGATTAGATTTCGGGAGACCTTGATGTTGCCAAAGATGCTCTTGTGCAAGTTCTTACACGATTGAGAGCAAACCTTTTCGATAGAGAGGGTGCTGTCCCTGGATTCCTTCCAGTTCTACCATATATTCCTGCTCCAGTAGATGGTCCAGATGTTCTTAACTATGACAGTAGGGATGTCAAAAGACATGGACGCGGACATTCATATTCAAGTGGCTATGGAGGCTCAAGTGATTTAGGTCCTGGTGACACTTATGGAAGCTATGCAAGTTCACAGGTACTTCTATCTAACCAAATTTGATTTTTGAAGAACATTTTCTTGTTGCTGAGTTCTTTAAAAGTTCAATTTAATCCATTATCTCTCATCCGTTGTTTGTAATATTGTTCCGTTTATCTGTAGCTTGCTGGAGGCAGTGGCTATGGGGACTATGAAAGTTATTCTTTGGGACGGAATAGTACTGTTTGGTAA
Protein sequence

>MS.gene62721.t1

MGGQRERNNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKRVSPAEDALFKIHDRVVAEDLQSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAPLVGPYGGYKGDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKGDECLITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIISFTTRLLVSSARIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLNYDSRDVKRHGRGHSYSSGYGGSSDLGPGDTYGSYASSQLAGGSGYGDYESYSLGRNSTVW