Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63088.t1 | RHN41243.1 | 98.6 | 286 | 4 | 0 | 36 | 321 | 1 | 286 | 4.20E-161 | 577.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63088.t1 | Q56XY2 | 84.4 | 282 | 44 | 0 | 36 | 317 | 1 | 282 | 3.2e-141 | 502.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63088.t1 | G7LEM4 | 98.6 | 286 | 4 | 0 | 36 | 321 | 1 | 286 | 3.0e-161 | 577.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49124 | MS.gene63088 | PPI |
| MS.gene34135 | MS.gene63088 | PPI |
| MS.gene25822 | MS.gene63088 | PPI |
| MS.gene006260 | MS.gene63088 | PPI |
| MS.gene70743 | MS.gene63088 | PPI |
| MS.gene061152 | MS.gene63088 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63088.t1 | MTR_8g062340 | 98.601 | 286 | 4 | 0 | 36 | 321 | 1 | 286 | 0.0 | 578 |
| MS.gene63088.t1 | MTR_8g062340 | 98.582 | 282 | 4 | 0 | 36 | 317 | 1 | 282 | 0.0 | 570 |
| MS.gene63088.t1 | MTR_5g089950 | 94.521 | 292 | 16 | 0 | 36 | 327 | 1 | 292 | 0.0 | 568 |
| MS.gene63088.t1 | MTR_3g080040 | 39.689 | 257 | 147 | 4 | 36 | 291 | 1 | 250 | 4.27e-57 | 186 |
| MS.gene63088.t1 | MTR_1g100240 | 29.570 | 186 | 128 | 2 | 41 | 225 | 61 | 244 | 1.69e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63088.t1 | AT5G22370 | 84.397 | 282 | 44 | 0 | 36 | 317 | 1 | 282 | 1.00e-176 | 491 |
| MS.gene63088.t1 | AT5G22370 | 84.397 | 282 | 44 | 0 | 36 | 317 | 1 | 282 | 1.00e-176 | 491 |
| MS.gene63088.t1 | AT5G22370 | 84.397 | 282 | 44 | 0 | 36 | 317 | 1 | 282 | 1.00e-176 | 491 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G12790 | 39.683 | 252 | 144 | 5 | 36 | 286 | 1 | 245 | 1.84e-55 | 182 |
| MS.gene63088.t1 | AT4G21800 | 29.032 | 186 | 129 | 2 | 41 | 225 | 45 | 228 | 1.07e-16 | 80.5 |
| MS.gene63088.t1 | AT4G21800 | 29.032 | 186 | 129 | 2 | 41 | 225 | 45 | 228 | 1.07e-16 | 80.5 |
Find 48 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAAGAAATTAAATTTA+AGG | 0.160293 | 8.1:-42829849 | MS.gene63088:CDS |
| TCTCAGTTTCTCAGTCTTAT+TGG | 0.191410 | 8.1:-42831572 | MS.gene63088:CDS |
| GAAGGTTGCTGTTGTCAATT+TGG | 0.238676 | 8.1:-42831427 | MS.gene63088:CDS |
| GAGTTTCATGATGACATTCT+TGG | 0.297509 | 8.1:+42829870 | None:intergenic |
| CATAAAGAAATTAAATTTAA+GGG | 0.342873 | 8.1:-42829848 | MS.gene63088:intron |
| CATATGTAGCATTGTGGATA+AGG | 0.347185 | 8.1:+42829678 | None:intergenic |
| GTGTTTGGGCAAGTAGTAAT+TGG | 0.379485 | 8.1:-42831635 | MS.gene63088:CDS |
| GCAGTTAACGGCAGTGCATT+TGG | 0.382478 | 8.1:-42829755 | MS.gene63088:intron |
| ACCAATGGGTACATATTTGC+AGG | 0.382879 | 8.1:-42828375 | MS.gene63088:CDS |
| CTTATCCACAATGCTACATA+TGG | 0.405899 | 8.1:-42829677 | MS.gene63088:CDS |
| TTGCTATGGGAGCTCCTGAT+TGG | 0.412468 | 8.1:-42828320 | MS.gene63088:CDS |
| TGCTATGGGAGCTCCTGATT+GGG | 0.444795 | 8.1:-42828319 | MS.gene63088:CDS |
| GTAATTGGTCCTCCTGGCTC+TGG | 0.464770 | 8.1:-42831620 | MS.gene63088:CDS |
| TATCTATAATAATCCCAATC+AGG | 0.464822 | 8.1:+42828306 | None:intergenic |
| AGCAGGTCTTGTATACTGTA+TGG | 0.470732 | 8.1:-42830139 | MS.gene63088:intron |
| GGCAAAACAACTTACTGTAA+TGG | 0.474727 | 8.1:-42831599 | MS.gene63088:CDS |
| TGAGTTTAGCAAGATTGCTA+TGG | 0.481761 | 8.1:-42828334 | MS.gene63088:CDS |
| CAAGTAGTAATTGGTCCTCC+TGG | 0.487745 | 8.1:-42831626 | MS.gene63088:CDS |
| TACAGGACAAAGAGAGTGTA+GGG | 0.495599 | 8.1:-42828422 | MS.gene63088:intron |
| ATTGATTTAATTGAGAGCTA+CGG | 0.505811 | 8.1:-42829625 | MS.gene63088:CDS |
| GCCTGCAAATATGTACCCAT+TGG | 0.511844 | 8.1:+42828374 | None:intergenic |
| GAGTTTAGCAAGATTGCTAT+GGG | 0.516035 | 8.1:-42828333 | MS.gene63088:CDS |
| ATGTAATAACCTTTCAGAAG+AGG | 0.516692 | 8.1:+42830072 | None:intergenic |
| TACGGTAATGAATCATTAGC+AGG | 0.520426 | 8.1:+42831402 | None:intergenic |
| ATTGAGAGCTACGGAAAGCT+AGG | 0.526200 | 8.1:-42829616 | MS.gene63088:intron |
| AATGCACTGATGTACTTCCC+AGG | 0.529333 | 8.1:+42829709 | None:intergenic |
| GTCATGATAGAACATTCTCT+TGG | 0.534776 | 8.1:-42831223 | MS.gene63088:CDS |
| AGCTGATAGACAAAACCAAT+GGG | 0.538423 | 8.1:-42828389 | MS.gene63088:CDS |
| CTCACCTTTGTAGTGACCCT+GGG | 0.542915 | 8.1:-42829726 | MS.gene63088:CDS |
| AGTTTCTCAGTCTTATTGGA+AGG | 0.547465 | 8.1:-42831568 | MS.gene63088:intron |
| ATCCTCACTCTGCTAAGTAC+AGG | 0.548378 | 8.1:-42829427 | MS.gene63088:intron |
| GAACATTCTCTTGGTCCTAA+CGG | 0.549358 | 8.1:-42831214 | MS.gene63088:CDS |
| AGGCACTAACCTTCGGTTGG+TGG | 0.553023 | 8.1:+42831870 | None:intergenic |
| GGAATAGACTTACCTCCGTT+AGG | 0.557616 | 8.1:+42831199 | None:intergenic |
| GCTCACCTTTGTAGTGACCC+TGG | 0.560452 | 8.1:-42829727 | MS.gene63088:CDS |
| AAGCTGATAGACAAAACCAA+TGG | 0.563724 | 8.1:-42828390 | MS.gene63088:CDS |
| TTACAGGACAAAGAGAGTGT+AGG | 0.576655 | 8.1:-42828423 | MS.gene63088:intron |
| AAATTGAAACCTCTTCTGAA+AGG | 0.597814 | 8.1:-42830081 | MS.gene63088:intron |
| CTGCTGAGTCCACCAACCGA+AGG | 0.608966 | 8.1:-42831879 | MS.gene63088:intron |
| GTGAGGCACTAACCTTCGGT+TGG | 0.632543 | 8.1:+42831867 | None:intergenic |
| ATGCACTGATGTACTTCCCA+GGG | 0.635507 | 8.1:+42829710 | None:intergenic |
| TAGTTCCATATGTAGCATTG+TGG | 0.637705 | 8.1:+42829672 | None:intergenic |
| TGAATGTGCTGTTAACATTG+AGG | 0.656321 | 8.1:-42831266 | MS.gene63088:CDS |
| ACTTCCCAGGGTCACTACAA+AGG | 0.660832 | 8.1:+42829722 | None:intergenic |
| CACCTGTACTTAGCAGAGTG+AGG | 0.666310 | 8.1:+42829425 | None:intergenic |
| CATTCTCTTGGTCCTAACGG+AGG | 0.702168 | 8.1:-42831211 | MS.gene63088:intron |
| TATTTGCAGAAAGCTCACAA+AGG | 0.702746 | 8.1:-42828580 | MS.gene63088:intron |
| TTTGACAAGACATTTATGTG+GGG | 0.708491 | 8.1:+42829649 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAGAAATTAAATTTAA+GGG | - | chr8.1:42830811-42830830 | MS.gene63088:intron | 10.0% |
| !! | CATATCTATATTTATTATTA+AGG | + | chr8.1:42829375-42829394 | None:intergenic | 10.0% |
| !! | TCATAAAGAAATTAAATTTA+AGG | - | chr8.1:42830810-42830829 | MS.gene63088:intron | 10.0% |
| !!! | TATCTTTTTAATTAAATTTC+GGG | - | chr8.1:42829146-42829165 | MS.gene63088:intron | 10.0% |
| !! | AAATTAACTGTTATATTGAA+TGG | - | chr8.1:42830136-42830155 | MS.gene63088:CDS | 15.0% |
| !! | AATTAACTGTTATATTGAAT+GGG | - | chr8.1:42830137-42830156 | MS.gene63088:CDS | 15.0% |
| !! | CAAATAAGAAAATAAAACTT+AGG | + | chr8.1:42831390-42831409 | None:intergenic | 15.0% |
| !! | TATAGTTAAGTTAATTGATA+TGG | - | chr8.1:42829345-42829364 | MS.gene63088:intron | 15.0% |
| !! | TATTTGAGAAATTATTAAGA+AGG | - | chr8.1:42829715-42829734 | MS.gene63088:CDS | 15.0% |
| !!! | AATATTGTTGTTATTCTTAA+AGG | - | chr8.1:42829301-42829320 | MS.gene63088:intron | 15.0% |
| !!! | ATAGTTTTTTTAATGGTAAA+TGG | + | chr8.1:42829698-42829717 | None:intergenic | 15.0% |
| !!! | TTACATTAAATACATTTTTC+AGG | - | chr8.1:42828351-42828370 | MS.gene63088:CDS | 15.0% |
| !!! | TTCTCAAATAGTTTTTTTAA+TGG | + | chr8.1:42829705-42829724 | None:intergenic | 15.0% |
| !! | AATACTTAAAACAACCAAAA+AGG | + | chr8.1:42829484-42829503 | None:intergenic | 20.0% |
| !! | AATATGGCAGAAAAATAAAA+GGG | + | chr8.1:42831607-42831626 | None:intergenic | 20.0% |
| !! | AGAAAATTGAATCAATTGAA+TGG | + | chr8.1:42828924-42828943 | None:intergenic | 20.0% |
| !! | AGAGATACTAATGTAAAATA+TGG | - | chr8.1:42831784-42831803 | MS.gene63088:intron | 20.0% |
| !! | ATAACAACAATATTTCAAAG+AGG | + | chr8.1:42829295-42829314 | None:intergenic | 20.0% |
| !! | ATACCTAAATTAGTAGAAAT+TGG | + | chr8.1:42829177-42829196 | None:intergenic | 20.0% |
| !! | ATATGATTTAGAGAAACTTT+CGG | + | chr8.1:42828649-42828668 | None:intergenic | 20.0% |
| !! | TAATATGGCAGAAAAATAAA+AGG | + | chr8.1:42831608-42831627 | None:intergenic | 20.0% |
| !! | TAATGAAATCAAATATATGC+TGG | - | chr8.1:42831898-42831917 | MS.gene63088:CDS | 20.0% |
| !! | TACGAACAAAAGAAAAAATT+AGG | + | chr8.1:42832178-42832197 | None:intergenic | 20.0% |
| !! | TTAGTTTATTTGAGCTTATT+TGG | + | chr8.1:42830433-42830452 | None:intergenic | 20.0% |
| !! | TTTCCAATTTCTACTAATTT+AGG | - | chr8.1:42829171-42829190 | MS.gene63088:intron | 20.0% |
| !!! | AGGAAACTACATTTTAATAA+AGG | + | chr8.1:42831370-42831389 | None:intergenic | 20.0% |
| !!! | ATTATTAGCACTAGATTTTA+AGG | - | chr8.1:42828987-42829006 | MS.gene63088:intron | 20.0% |
| !!! | ATTTTCATTTATGCAGTTAA+CGG | - | chr8.1:42830892-42830911 | MS.gene63088:intron | 20.0% |
| !!! | CAAATTAGTTCTTGAAATAA+TGG | + | chr8.1:42830871-42830890 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTAATCAAAACA+GGG | + | chr8.1:42830193-42830212 | None:intergenic | 20.0% |
| !!! | TTTAAAATATGTGCTTGTTA+AGG | - | chr8.1:42829511-42829530 | MS.gene63088:intron | 20.0% |
| !!! | TTTTACAACATTAGATATTC+AGG | - | chr8.1:42832139-42832158 | MS.gene63088:intron | 20.0% |
| !!! | TTTTATTAAAAATAGCTCTG+AGG | - | chr8.1:42828389-42828408 | MS.gene63088:CDS | 20.0% |
| !!! | TTTTTAATGACTACATTGAT+TGG | + | chr8.1:42828465-42828484 | None:intergenic | 20.0% |
| ! | AAAAAAAACCGTGTATCTTA+AGG | + | chr8.1:42832025-42832044 | None:intergenic | 25.0% |
| ! | AAGAAAAAATTAGGCATATC+TGG | + | chr8.1:42832169-42832188 | None:intergenic | 25.0% |
| ! | AAGAACTAGAAAAACTATTG+TGG | - | chr8.1:42829571-42829590 | MS.gene63088:intron | 25.0% |
| ! | AATCAATTGAATGGAAACAA+AGG | + | chr8.1:42828915-42828934 | None:intergenic | 25.0% |
| ! | ACTTATTGAAATTCATGTTG+AGG | + | chr8.1:42828865-42828884 | None:intergenic | 25.0% |
| ! | AGAACTAGAAAAACTATTGT+GGG | - | chr8.1:42829572-42829591 | MS.gene63088:intron | 25.0% |
| ! | ATAAAATGTTAACCAAATCG+TGG | + | chr8.1:42831833-42831852 | None:intergenic | 25.0% |
| ! | ATCAATTGAATGGAAACAAA+GGG | + | chr8.1:42828914-42828933 | None:intergenic | 25.0% |
| ! | ATCTAGAGAAAAATATTGAC+TGG | - | chr8.1:42830546-42830565 | MS.gene63088:intron | 25.0% |
| ! | ATTTATCATTGTATCCTATG+TGG | - | chr8.1:42828434-42828453 | MS.gene63088:intron | 25.0% |
| ! | CAATATTTCAAAGAGGTTAA+TGG | + | chr8.1:42829288-42829307 | None:intergenic | 25.0% |
| ! | GTTTAGTAGAAATTCTAAGT+TGG | - | chr8.1:42832204-42832223 | MS.gene63088:intron | 25.0% |
| ! | TACTTCACAATATAAAAGCA+AGG | - | chr8.1:42828946-42828965 | MS.gene63088:intron | 25.0% |
| ! | TATATCATCCTTAAGATACA+CGG | - | chr8.1:42832014-42832033 | MS.gene63088:intron | 25.0% |
| ! | TATCTATAATAATCCCAATC+AGG | + | chr8.1:42832356-42832375 | None:intergenic | 25.0% |
| ! | TATGATTTAGAGAAACTTTC+GGG | + | chr8.1:42828648-42828667 | None:intergenic | 25.0% |
| ! | TGTATAAAAATCAAGGTTGA+AGG | + | chr8.1:42831169-42831188 | None:intergenic | 25.0% |
| ! | TTAATATTTACTCTTTCGTC+CGG | + | chr8.1:42829657-42829676 | None:intergenic | 25.0% |
| ! | TTACAAGCTGCTAATATAAA+AGG | + | chr8.1:42831881-42831900 | None:intergenic | 25.0% |
| ! | TTCACAGCAACAATTTAATA+TGG | + | chr8.1:42831747-42831766 | None:intergenic | 25.0% |
| !! | AGACAAAAATTTGGCATTTT+AGG | + | chr8.1:42828840-42828859 | None:intergenic | 25.0% |
| !! | ATAAGTACTTGTGAGATTTT+TGG | + | chr8.1:42830409-42830428 | None:intergenic | 25.0% |
| !! | ATTGATTTAATTGAGAGCTA+CGG | - | chr8.1:42831034-42831053 | MS.gene63088:intron | 25.0% |
| !! | GACAAAAATTTGGCATTTTA+GGG | + | chr8.1:42828839-42828858 | None:intergenic | 25.0% |
| !! | GTTAAGTTGTTAATCAAAAC+AGG | + | chr8.1:42830194-42830213 | None:intergenic | 25.0% |
| !! | TGGTTAAGTTTGGTTTAAAT+GGG | - | chr8.1:42831959-42831978 | MS.gene63088:intron | 25.0% |
| !! | TTTTGACAAGACATTTATGT+GGG | + | chr8.1:42831014-42831033 | None:intergenic | 25.0% |
| !! | TTTTTGACAAGACATTTATG+TGG | + | chr8.1:42831015-42831034 | None:intergenic | 25.0% |
| !!! | ACTATTTTTATAAGCTGTCA+TGG | - | chr8.1:42830317-42830336 | MS.gene63088:intron | 25.0% |
| !!! | GTTAAATGCATTTTTTAAGC+TGG | - | chr8.1:42831092-42831111 | MS.gene63088:intron | 25.0% |
| !!! | TAAAAATTTTCGTCGACTTT+TGG | + | chr8.1:42828574-42828593 | None:intergenic | 25.0% |
| !!! | TAATTTTCCTTGTTTGCAAA+TGG | - | chr8.1:42831936-42831955 | MS.gene63088:intron | 25.0% |
| !!! | TTTTAAGGAAGGAAGAAAAA+TGG | - | chr8.1:42829002-42829021 | MS.gene63088:intron | 25.0% |
| AAATTGAAACCTCTTCTGAA+AGG | - | chr8.1:42830578-42830597 | MS.gene63088:intron | 30.0% | |
| AACATGATGATACAGACAAA+AGG | + | chr8.1:42828679-42828698 | None:intergenic | 30.0% | |
| AACTAGAAAAACTATTGTGG+GGG | - | chr8.1:42829574-42829593 | MS.gene63088:intron | 30.0% | |
| AAGGAAGAAAAATGGTGTTT+GGG | - | chr8.1:42829010-42829029 | MS.gene63088:intron | 30.0% | |
| ACATGATGATACAGACAAAA+GGG | + | chr8.1:42828678-42828697 | None:intergenic | 30.0% | |
| ACCCTGTCAACAATTTAATA+TGG | + | chr8.1:42831623-42831642 | None:intergenic | 30.0% | |
| AGAGTACATCAAATCAATAG+AGG | - | chr8.1:42829542-42829561 | MS.gene63088:intron | 30.0% | |
| AGTGCATTTAAGGACAATTT+AGG | + | chr8.1:42830641-42830660 | None:intergenic | 30.0% | |
| AGTTGCATGAGAAGAAAAAA+AGG | + | chr8.1:42832380-42832399 | None:intergenic | 30.0% | |
| ATGTAATAACCTTTCAGAAG+AGG | + | chr8.1:42830590-42830609 | None:intergenic | 30.0% | |
| ATTAAATTGTTGACAGGGTA+AGG | - | chr8.1:42831624-42831643 | MS.gene63088:CDS | 30.0% | |
| ATTTCAAAGAGGTTAATGGA+AGG | + | chr8.1:42829284-42829303 | None:intergenic | 30.0% | |
| CAGAAAAATAAAAGGGCAAA+GGG | + | chr8.1:42831600-42831619 | None:intergenic | 30.0% | |
| CAGACAAATAAAAGAGCAAA+GGG | + | chr8.1:42831724-42831743 | None:intergenic | 30.0% | |
| GAACTAGAAAAACTATTGTG+GGG | - | chr8.1:42829573-42829592 | MS.gene63088:intron | 30.0% | |
| GAAGAAAAAATAGTTCCACT+TGG | + | chr8.1:42830760-42830779 | None:intergenic | 30.0% | |
| GCACATCTGTATAAAAATCA+AGG | + | chr8.1:42831176-42831195 | None:intergenic | 30.0% | |
| GCCATATTAAATTGTTGACA+GGG | - | chr8.1:42831619-42831638 | MS.gene63088:CDS | 30.0% | |
| GTTGAGGAAAGACAAAAATT+TGG | + | chr8.1:42828849-42828868 | None:intergenic | 30.0% | |
| TAATATTTACTCTTTCGTCC+GGG | + | chr8.1:42829656-42829675 | None:intergenic | 30.0% | |
| TATTTGTGTTAGTGTTTCAG+AGG | - | chr8.1:42830050-42830069 | MS.gene63088:intron | 30.0% | |
| TGCCATATTAAATTGTTGAC+AGG | - | chr8.1:42831618-42831637 | MS.gene63088:CDS | 30.0% | |
| TTTGACAAGACATTTATGTG+GGG | + | chr8.1:42831013-42831032 | None:intergenic | 30.0% | |
| TTTGGTCCAAACTGTTAAAT+GGG | + | chr8.1:42828525-42828544 | None:intergenic | 30.0% | |
| ! | AAATATTCCATCCACACTTT+TGG | + | chr8.1:42828543-42828562 | None:intergenic | 30.0% |
| ! | AAGTTGGATTATCCTTTTAC+AGG | - | chr8.1:42832220-42832239 | MS.gene63088:intron | 30.0% |
| ! | AGAGAAAAATATTGACTGGT+TGG | - | chr8.1:42830550-42830569 | MS.gene63088:intron | 30.0% |
| ! | GTGGTTAAGTTTGGTTTAAA+TGG | - | chr8.1:42831958-42831977 | MS.gene63088:intron | 30.0% |
| ! | TGATTACACATTTGAAGTGT+AGG | - | chr8.1:42829869-42829888 | MS.gene63088:CDS | 30.0% |
| ! | TTTTGGTCCAAACTGTTAAA+TGG | + | chr8.1:42828526-42828545 | None:intergenic | 30.0% |
| !! | AAGTCGACGAAAATTTTTAG+AGG | - | chr8.1:42828575-42828594 | MS.gene63088:intron | 30.0% |
| !! | GAGATTTTTGGAAGAACTTA+TGG | + | chr8.1:42830397-42830416 | None:intergenic | 30.0% |
| !! | GGCTCTAATAAAAGGTATTA+AGG | + | chr8.1:42830172-42830191 | None:intergenic | 30.0% |
| !! | GTAATTACTTTTGCATGCTA+GGG | - | chr8.1:42831070-42831089 | MS.gene63088:intron | 30.0% |
| !! | GTTTTCTACTTTTCAAATGC+AGG | - | chr8.1:42829210-42829229 | MS.gene63088:intron | 30.0% |
| !! | TATCTACTCTTTGATTTTCC+TGG | - | chr8.1:42830734-42830753 | MS.gene63088:intron | 30.0% |
| !! | TGTAATTACTTTTGCATGCT+AGG | - | chr8.1:42831069-42831088 | MS.gene63088:intron | 30.0% |
| !! | TTAGCACTAGATTTTAAGGA+AGG | - | chr8.1:42828991-42829010 | MS.gene63088:intron | 30.0% |
| !! | TTTGTTTTCTGGGAATTTGA+AGG | - | chr8.1:42828281-42828300 | MS.gene63088:CDS | 30.0% |
| AAACTGTTAAATGGGGCAAA+TGG | + | chr8.1:42828517-42828536 | None:intergenic | 35.0% | |
| AACAGTCTCTTGTGTAAAAC+AGG | - | chr8.1:42831494-42831513 | MS.gene63088:intron | 35.0% | |
| AACTAATCTAAACAGACCCT+AGG | - | chr8.1:42830447-42830466 | MS.gene63088:intron | 35.0% | |
| AAGAGGTTAATGGAAGGATA+CGG | + | chr8.1:42829278-42829297 | None:intergenic | 35.0% | |
| ACAGTAAGACACAAATACCT+AGG | + | chr8.1:42830467-42830486 | None:intergenic | 35.0% | |
| ACAGTCTCTTGTGTAAAACA+GGG | - | chr8.1:42831495-42831514 | MS.gene63088:intron | 35.0% | |
| ACTAGAAAAACTATTGTGGG+GGG | - | chr8.1:42829575-42829594 | MS.gene63088:intron | 35.0% | |
| AGAGATTAATGAGATGGACA+GGG | - | chr8.1:42829742-42829761 | MS.gene63088:CDS | 35.0% | |
| AGAGGTCGAAATGAAAAGTT+GGG | - | chr8.1:42828593-42828612 | MS.gene63088:intron | 35.0% | |
| ATGATGATACAGACAAAAGG+GGG | + | chr8.1:42828676-42828695 | None:intergenic | 35.0% | |
| ATTCTCTCTTTCTCTCTATG+CGG | - | chr8.1:42831851-42831870 | MS.gene63088:intron | 35.0% | |
| ATTTGCCCCATTTAACAGTT+TGG | - | chr8.1:42828516-42828535 | MS.gene63088:intron | 35.0% | |
| ATTTGTCTTGTCTATGCTGA+GGG | - | chr8.1:42831405-42831424 | MS.gene63088:CDS | 35.0% | |
| CAGTAAGACACAAATACCTA+GGG | + | chr8.1:42830466-42830485 | None:intergenic | 35.0% | |
| CATATGTAGCATTGTGGATA+AGG | + | chr8.1:42830984-42831003 | None:intergenic | 35.0% | |
| CATCAAATCAATAGAGGTAG+AGG | - | chr8.1:42829548-42829567 | MS.gene63088:intron | 35.0% | |
| CATGATGATACAGACAAAAG+GGG | + | chr8.1:42828677-42828696 | None:intergenic | 35.0% | |
| CTAGAGTAGTTTAGCTGAAT+AGG | + | chr8.1:42830681-42830700 | None:intergenic | 35.0% | |
| CTTATCCACAATGCTACATA+TGG | - | chr8.1:42830982-42831001 | MS.gene63088:intron | 35.0% | |
| GAAGGAAGAAAAATGGTGTT+TGG | - | chr8.1:42829009-42829028 | MS.gene63088:intron | 35.0% | |
| GAGTTTAGCAAGATTGCTAT+GGG | - | chr8.1:42832326-42832345 | MS.gene63088:intron | 35.0% | |
| GAGTTTCATGATGACATTCT+TGG | + | chr8.1:42830792-42830811 | None:intergenic | 35.0% | |
| GCAGAAAAATAAAAGGGCAA+AGG | + | chr8.1:42831601-42831620 | None:intergenic | 35.0% | |
| GCAGACAAATAAAAGAGCAA+AGG | + | chr8.1:42831725-42831744 | None:intergenic | 35.0% | |
| GGATCTAGAGATTAATGAGA+TGG | - | chr8.1:42829736-42829755 | MS.gene63088:CDS | 35.0% | |
| GGCAAAACAACTTACTGTAA+TGG | - | chr8.1:42829060-42829079 | MS.gene63088:intron | 35.0% | |
| GTCATGATAGAACATTCTCT+TGG | - | chr8.1:42829436-42829455 | MS.gene63088:CDS | 35.0% | |
| GTCATTAAAAATAGCCAGTG+TGG | - | chr8.1:42828474-42828493 | MS.gene63088:intron | 35.0% | |
| GTTCATAAGGGATAAAGAGT+TGG | - | chr8.1:42829614-42829633 | MS.gene63088:intron | 35.0% | |
| TACGGTAATGAATCATTAGC+AGG | + | chr8.1:42829260-42829279 | None:intergenic | 35.0% | |
| TAGAGATTAATGAGATGGAC+AGG | - | chr8.1:42829741-42829760 | MS.gene63088:CDS | 35.0% | |
| TAGAGGTCGAAATGAAAAGT+TGG | - | chr8.1:42828592-42828611 | MS.gene63088:intron | 35.0% | |
| TAGTTCCATATGTAGCATTG+TGG | + | chr8.1:42830990-42831009 | None:intergenic | 35.0% | |
| TATTTGCAGAAAGCTCACAA+AGG | - | chr8.1:42832079-42832098 | MS.gene63088:intron | 35.0% | |
| TATTTGTCTTGTCTATGCTG+AGG | - | chr8.1:42831404-42831423 | MS.gene63088:intron | 35.0% | |
| TGAAATAATGGTTCGACACT+AGG | + | chr8.1:42830859-42830878 | None:intergenic | 35.0% | |
| TGAGTTTAGCAAGATTGCTA+TGG | - | chr8.1:42832325-42832344 | MS.gene63088:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr8.1:42831526-42831545 | MS.gene63088:intron | 35.0% | |
| TTAACCACCATTTGCAAACA+AGG | + | chr8.1:42831946-42831965 | None:intergenic | 35.0% | |
| TTGCAAATGGTGGTTAAGTT+TGG | - | chr8.1:42831949-42831968 | MS.gene63088:intron | 35.0% | |
| TTGGTCCAAACTGTTAAATG+GGG | + | chr8.1:42828524-42828543 | None:intergenic | 35.0% | |
| ! | AGTGTGGATGGAATATTTTG+TGG | - | chr8.1:42828545-42828564 | MS.gene63088:CDS | 35.0% |
| ! | CAAAACAGGGCTCTAATAAA+AGG | + | chr8.1:42830180-42830199 | None:intergenic | 35.0% |
| ! | CTTTTGTTGCGTCTATGTTT+TGG | - | chr8.1:42830003-42830022 | MS.gene63088:intron | 35.0% |
| ! | GAGGTAAGTCTATTCCTTTT+TGG | - | chr8.1:42829467-42829486 | MS.gene63088:CDS | 35.0% |
| ! | GTAGTTTGTGAGTGCATTTA+AGG | + | chr8.1:42830651-42830670 | None:intergenic | 35.0% |
| ! | TCTCAGTTTCTCAGTCTTAT+TGG | - | chr8.1:42829087-42829106 | MS.gene63088:intron | 35.0% |
| ! | TGAATGTGCTGTTAACATTG+AGG | - | chr8.1:42829393-42829412 | MS.gene63088:intron | 35.0% |
| ! | TTACACAAGAGACTGTTTCT+AGG | + | chr8.1:42831491-42831510 | None:intergenic | 35.0% |
| !! | AGTTTCTCAGTCTTATTGGA+AGG | - | chr8.1:42829091-42829110 | MS.gene63088:intron | 35.0% |
| !! | TCTACTTTTCAAATGCAGGA+AGG | - | chr8.1:42829214-42829233 | MS.gene63088:intron | 35.0% |
| !! | TTTTCCTTGTTTGCAAATGG+TGG | - | chr8.1:42831939-42831958 | MS.gene63088:intron | 35.0% |
| !!! | CGTCTATGTTTTGGTGTTAA+TGG | - | chr8.1:42830012-42830031 | MS.gene63088:intron | 35.0% |
| AAAAATAGTTCCACTTGGCC+AGG | + | chr8.1:42830755-42830774 | None:intergenic | 40.0% | |
| AACAGTTTGGACCAAAAGTG+TGG | - | chr8.1:42828529-42828548 | MS.gene63088:CDS | 40.0% | |
| AAGCTGTCATGGAGAACTTA+TGG | - | chr8.1:42830328-42830347 | MS.gene63088:intron | 40.0% | |
| ACCAATGGGTACATATTTGC+AGG | - | chr8.1:42832284-42832303 | MS.gene63088:intron | 40.0% | |
| AGCTGTCATGGAGAACTTAT+GGG | - | chr8.1:42830329-42830348 | MS.gene63088:intron | 40.0% | |
| ATTGATTGGACATGCCACAT+AGG | + | chr8.1:42828451-42828470 | None:intergenic | 40.0% | |
| CACTCTCTTTGTCCTGTAAA+AGG | + | chr8.1:42832235-42832254 | None:intergenic | 40.0% | |
| CATAAGGGATAAAGAGTTGG+AGG | - | chr8.1:42829617-42829636 | MS.gene63088:CDS | 40.0% | |
| CTAGAAAAACTATTGTGGGG+GGG | - | chr8.1:42829576-42829595 | MS.gene63088:intron | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr8.1:42831500-42831519 | MS.gene63088:intron | 40.0% | |
| CTTTCATCTCTTCATCTCCA+AGG | - | chr8.1:42828732-42828751 | MS.gene63088:intron | 40.0% | |
| GAACACGCTTACAATCTGAA+AGG | + | chr8.1:42829920-42829939 | None:intergenic | 40.0% | |
| GAACATTCTCTTGGTCCTAA+CGG | - | chr8.1:42829445-42829464 | MS.gene63088:CDS | 40.0% | |
| GAGATTAATGAGATGGACAG+GGG | - | chr8.1:42829743-42829762 | MS.gene63088:CDS | 40.0% | |
| GATGACAATACTCCACGATT+TGG | - | chr8.1:42831818-42831837 | MS.gene63088:intron | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | - | chr8.1:42831522-42831541 | MS.gene63088:intron | 40.0% | |
| GTGTAATCACGCAGAACTAT+TGG | + | chr8.1:42829858-42829877 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr8.1:42831525-42831544 | MS.gene63088:intron | 40.0% | |
| GTGTTTGGGCAAGTAGTAAT+TGG | - | chr8.1:42829024-42829043 | MS.gene63088:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8.1:42831451-42831470 | MS.gene63088:intron | 40.0% | |
| TAGAAAAACTATTGTGGGGG+GGG | - | chr8.1:42829577-42829596 | MS.gene63088:intron | 40.0% | |
| TGAAGGCTGCAACAATGAAA+TGG | + | chr8.1:42831152-42831171 | None:intergenic | 40.0% | |
| TGTTAGTGTTTCAGAGGTGA+TGG | - | chr8.1:42830056-42830075 | MS.gene63088:intron | 40.0% | |
| TTCACTTGTGTTGTACAAGC+AGG | - | chr8.1:42830503-42830522 | MS.gene63088:intron | 40.0% | |
| TTTGTCTTGTCTATGCTGAG+GGG | - | chr8.1:42831406-42831425 | MS.gene63088:CDS | 40.0% | |
| ! | AAAAGTGAGGCACTAACCTT+CGG | + | chr8.1:42828799-42828818 | None:intergenic | 40.0% |
| ! | ACACATTTGAAGTGTAGGCA+TGG | - | chr8.1:42829874-42829893 | MS.gene63088:CDS | 40.0% |
| ! | AGCAGGTCTTGTATACTGTA+TGG | - | chr8.1:42830520-42830539 | MS.gene63088:intron | 40.0% |
| ! | CACATTTGAAGTGTAGGCAT+GGG | - | chr8.1:42829875-42829894 | MS.gene63088:CDS | 40.0% |
| ! | GAAGGTTGCTGTTGTCAATT+TGG | - | chr8.1:42829232-42829251 | MS.gene63088:intron | 40.0% |
| ! | TACAGGACAAAGAGAGTGTA+GGG | - | chr8.1:42832237-42832256 | MS.gene63088:intron | 40.0% |
| ! | TGGGTGATGGTATATAGCAT+CGG | - | chr8.1:42829894-42829913 | MS.gene63088:CDS | 40.0% |
| ! | TTACAGGACAAAGAGAGTGT+AGG | - | chr8.1:42832236-42832255 | MS.gene63088:intron | 40.0% |
| !! | GTTTTCTGGGAATTTGAAGG+TGG | - | chr8.1:42828284-42828303 | MS.gene63088:CDS | 40.0% |
| !!! | ATGTTTTGGTGTTAATGGCG+TGG | - | chr8.1:42830017-42830036 | MS.gene63088:intron | 40.0% |
| !!! | TTAGGGTTTTTGAGACGAAG+AGG | + | chr8.1:42828822-42828841 | None:intergenic | 40.0% |
| AGAAAAACTATTGTGGGGGG+GGG | - | chr8.1:42829578-42829597 | MS.gene63088:intron | 45.0% | |
| ATCCTCACTCTGCTAAGTAC+AGG | - | chr8.1:42831232-42831251 | MS.gene63088:CDS | 45.0% | |
| ATTGAGAGCTACGGAAAGCT+AGG | - | chr8.1:42831043-42831062 | MS.gene63088:intron | 45.0% | |
| CAAGTAGTAATTGGTCCTCC+TGG | - | chr8.1:42829033-42829052 | MS.gene63088:intron | 45.0% | |
| CGTACAATACACCAAATGGC+GGG | - | chr8.1:42831650-42831669 | MS.gene63088:CDS | 45.0% | |
| CTTATCCCACTAAGTGGGAT+CGG | + | chr8.1:42829813-42829832 | None:intergenic | 45.0% | |
| GATCGGCTACATGGATCAAA+CGG | + | chr8.1:42829796-42829815 | None:intergenic | 45.0% | |
| GCCTGCAAATATGTACCCAT+TGG | + | chr8.1:42832288-42832307 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+CGG | - | chr8.1:42831649-42831668 | MS.gene63088:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr8.1:42831646-42831665 | MS.gene63088:CDS | 45.0% | |
| GGAATAGACTTACCTCCGTT+AGG | + | chr8.1:42829463-42829482 | None:intergenic | 45.0% | |
| TAAAAGAGCAAAGGGCAACC+CGG | + | chr8.1:42831716-42831735 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+AGG | - | chr8.1:42831458-42831477 | MS.gene63088:intron | 45.0% | |
| TGAGACGAAGAGGAAAAGTG+AGG | + | chr8.1:42828812-42828831 | None:intergenic | 45.0% | |
| TTTCGTCCGGGTTTAAACTC+AGG | + | chr8.1:42829644-42829663 | None:intergenic | 45.0% | |
| ! | AATGCACTGATGTACTTCCC+AGG | + | chr8.1:42830953-42830972 | None:intergenic | 45.0% |
| ! | ATGCACTGATGTACTTCCCA+GGG | + | chr8.1:42830952-42830971 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr8.1:42829818-42829837 | None:intergenic | 45.0% |
| ! | GTTTGGACCAAAAGTGTGGA+TGG | - | chr8.1:42828533-42828552 | MS.gene63088:CDS | 45.0% |
| ! | TACAGGTGTGCTTTGTTGTG+TGG | - | chr8.1:42831249-42831268 | MS.gene63088:CDS | 45.0% |
| !! | CTTTGATTTTCCTGGCCAAG+TGG | - | chr8.1:42830742-42830761 | MS.gene63088:intron | 45.0% |
| !! | TAAGTTGTTTTGCCAGAGCC+AGG | + | chr8.1:42829054-42829073 | None:intergenic | 45.0% |
| !!! | TTATCTTTTTAATTAAATTT+CGG | - | chr8.1:42829145-42829164 | MS.gene63088:intron | 5.0% |
| AAAAACTATTGTGGGGGGGG+GGG | - | chr8.1:42829580-42829599 | MS.gene63088:intron | 50.0% | |
| ACTAAGTGGGATCGGCTACA+TGG | + | chr8.1:42829805-42829824 | None:intergenic | 50.0% | |
| ACTTCCCAGGGTCACTACAA+AGG | + | chr8.1:42830940-42830959 | None:intergenic | 50.0% | |
| ATGATGTGGCAATGCCACAC+TGG | + | chr8.1:42828491-42828510 | None:intergenic | 50.0% | |
| ATGTAGCCGATCCCACTTAG+TGG | - | chr8.1:42829804-42829823 | MS.gene63088:intron | 50.0% | |
| CAAAGCAAGCGAAGTGACCT+TGG | + | chr8.1:42828752-42828771 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8.1:42831435-42831454 | None:intergenic | 50.0% | |
| CACCTGTACTTAGCAGAGTG+AGG | + | chr8.1:42831237-42831256 | None:intergenic | 50.0% | |
| CATATGCAGGGTCTAGGAAG+GGG | + | chr8.1:42831677-42831696 | None:intergenic | 50.0% | |
| CATTCTCTTGGTCCTAACGG+AGG | - | chr8.1:42829448-42829467 | MS.gene63088:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr8.1:42829816-42829835 | MS.gene63088:intron | 50.0% | |
| CGATCCCACTTAGTGGGATA+AGG | - | chr8.1:42829811-42829830 | MS.gene63088:intron | 50.0% | |
| CTCACCTTTGTAGTGACCCT+GGG | - | chr8.1:42830933-42830952 | MS.gene63088:intron | 50.0% | |
| CTTCCTAGACCCTGCATATG+CGG | - | chr8.1:42831677-42831696 | MS.gene63088:intron | 50.0% | |
| GAAAAACTATTGTGGGGGGG+GGG | - | chr8.1:42829579-42829598 | MS.gene63088:intron | 50.0% | |
| GCAGTTAACGGCAGTGCATT+TGG | - | chr8.1:42830904-42830923 | MS.gene63088:intron | 50.0% | |
| GCATATGCAGGGTCTAGGAA+GGG | + | chr8.1:42831678-42831697 | None:intergenic | 50.0% | |
| GGAGGTCCTGAGTTTAAACC+CGG | - | chr8.1:42829635-42829654 | MS.gene63088:CDS | 50.0% | |
| TAAAAGGGCAAAGGGCAACC+CGG | + | chr8.1:42831592-42831611 | None:intergenic | 50.0% | |
| TCTATGCTGAGGGGTAACCT+TGG | - | chr8.1:42831415-42831434 | MS.gene63088:CDS | 50.0% | |
| TGAAGTGTAGGCATGGGTGA+TGG | - | chr8.1:42829881-42829900 | MS.gene63088:CDS | 50.0% | |
| TGCTATGGGAGCTCCTGATT+GGG | - | chr8.1:42832340-42832359 | MS.gene63088:intron | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | - | chr8.1:42829805-42829824 | MS.gene63088:intron | 50.0% | |
| TTCCTAGACCCTGCATATGC+GGG | - | chr8.1:42831678-42831697 | MS.gene63088:intron | 50.0% | |
| TTGCTATGGGAGCTCCTGAT+TGG | - | chr8.1:42832339-42832358 | MS.gene63088:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr8.1:42829819-42829838 | None:intergenic | 50.0% |
| AAAACTATTGTGGGGGGGGG+GGG | - | chr8.1:42829581-42829600 | MS.gene63088:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr8.1:42831566-42831585 | None:intergenic | 55.0% | |
| AGGCACTAACCTTCGGTTGG+TGG | + | chr8.1:42828792-42828811 | None:intergenic | 55.0% | |
| CATATGCAGGGTCTGGGAAG+GGG | + | chr8.1:42831553-42831572 | None:intergenic | 55.0% | |
| CGCATATGCAGGGTCTAGGA+AGG | + | chr8.1:42831679-42831698 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr8.1:42831565-42831584 | None:intergenic | 55.0% | |
| CTTCCCAGACCCTGCATATG+CGG | - | chr8.1:42831553-42831572 | MS.gene63088:intron | 55.0% | |
| GCATATGCAGGGTCTGGGAA+GGG | + | chr8.1:42831554-42831573 | None:intergenic | 55.0% | |
| GCTCACCTTTGTAGTGACCC+TGG | - | chr8.1:42830932-42830951 | MS.gene63088:intron | 55.0% | |
| GGGGCAAATGGCAGATGATG+TGG | + | chr8.1:42828505-42828524 | None:intergenic | 55.0% | |
| GTAATTGGTCCTCCTGGCTC+TGG | - | chr8.1:42829039-42829058 | MS.gene63088:intron | 55.0% | |
| TTCCCAGACCCTGCATATGC+GGG | - | chr8.1:42831554-42831573 | MS.gene63088:intron | 55.0% | |
| ! | GTGAGGCACTAACCTTCGGT+TGG | + | chr8.1:42828795-42828814 | None:intergenic | 55.0% |
| !! | GTTGTTTTGCCAGAGCCAGG+AGG | + | chr8.1:42829051-42829070 | None:intergenic | 55.0% |
| AAACTATTGTGGGGGGGGGG+GGG | - | chr8.1:42829582-42829601 | MS.gene63088:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8.1:42831424-42831443 | MS.gene63088:CDS | 60.0% | |
| CGCATATGCAGGGTCTGGGA+AGG | + | chr8.1:42831555-42831574 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+AGG | + | chr8.1:42831559-42831578 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+GGG | + | chr8.1:42831559-42831578 | None:intergenic | 60.0% | |
| CTGCTGAGTCCACCAACCGA+AGG | - | chr8.1:42828780-42828799 | MS.gene63088:intron | 60.0% | |
| GGGGGGGGGGTAGTTCATAA+GGG | - | chr8.1:42829602-42829621 | MS.gene63088:intron | 60.0% | |
| TAGGAAGGGGTCCCGCCATT+TGG | + | chr8.1:42831664-42831683 | None:intergenic | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr8.1:42831540-42831559 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr8.1:42831570-42831589 | MS.gene63088:CDS | 60.0% |
| AACTATTGTGGGGGGGGGGG+GGG | - | chr8.1:42829583-42829602 | MS.gene63088:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+TGG | + | chr8.1:42831560-42831579 | None:intergenic | 65.0% | |
| GGGGGGGGGGGTAGTTCATA+AGG | - | chr8.1:42829601-42829620 | MS.gene63088:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr8.1:42831571-42831590 | MS.gene63088:CDS | 65.0% |
| ACTATTGTGGGGGGGGGGGG+GGG | - | chr8.1:42829584-42829603 | MS.gene63088:intron | 70.0% | |
| CTATTGTGGGGGGGGGGGGG+GGG | - | chr8.1:42829585-42829604 | MS.gene63088:intron | 75.0% | |
| TATTGTGGGGGGGGGGGGGG+GGG | - | chr8.1:42829586-42829605 | MS.gene63088:intron | 75.0% | |
| ! | ATTGTGGGGGGGGGGGGGGG+GGG | - | chr8.1:42829587-42829606 | MS.gene63088:intron | 80.0% |
| ! | TTGTGGGGGGGGGGGGGGGG+GGG | - | chr8.1:42829588-42829607 | MS.gene63088:intron | 85.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr8.1:42829589-42829608 | MS.gene63088:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 42828275 | 42832406 | 42828275 | ID=MS.gene63088 |
| chr8.1 | mRNA | 42828275 | 42832406 | 42828275 | ID=MS.gene63088.t1;Parent=MS.gene63088 |
| chr8.1 | exon | 42832376 | 42832406 | 42832376 | ID=MS.gene63088.t1.exon1;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42832376 | 42832406 | 42832376 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42831880 | 42831927 | 42831880 | ID=MS.gene63088.t1.exon2;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42831880 | 42831927 | 42831880 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42831569 | 42831686 | 42831569 | ID=MS.gene63088.t1.exon3;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42831569 | 42831686 | 42831569 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42831405 | 42831449 | 42831405 | ID=MS.gene63088.t1.exon4;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42831405 | 42831449 | 42831405 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42831212 | 42831291 | 42831212 | ID=MS.gene63088.t1.exon5;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42831212 | 42831291 | 42831212 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42830082 | 42830156 | 42830082 | ID=MS.gene63088.t1.exon6;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42830082 | 42830156 | 42830082 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42829849 | 42829952 | 42829849 | ID=MS.gene63088.t1.exon7;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42829849 | 42829952 | 42829849 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42829617 | 42829773 | 42829617 | ID=MS.gene63088.t1.exon8;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42829617 | 42829773 | 42829617 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42829428 | 42829515 | 42829428 | ID=MS.gene63088.t1.exon9;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42829428 | 42829515 | 42829428 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42828521 | 42828593 | 42828521 | ID=MS.gene63088.t1.exon10;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42828521 | 42828593 | 42828521 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| chr8.1 | exon | 42828275 | 42828439 | 42828275 | ID=MS.gene63088.t1.exon11;Parent=MS.gene63088.t1 |
| chr8.1 | CDS | 42828275 | 42828439 | 42828275 | ID=cds.MS.gene63088.t1;Parent=MS.gene63088.t1 |
| Gene Sequence |
| Protein sequence |
