Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63513.t1 | XP_003598272.2 | 98.2 | 625 | 9 | 2 | 1 | 625 | 1 | 623 | 0.00E+00 | 1125.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63513.t1 | Q9FMA3 | 62.1 | 636 | 210 | 7 | 1 | 629 | 1 | 612 | 2.7e-198 | 693.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63513.t1 | G7J0B8 | 98.2 | 625 | 9 | 2 | 1 | 625 | 1 | 623 | 0.0e+00 | 1125.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33044 | MS.gene63513 | PPI |
| MS.gene63513 | MS.gene030781 | PPI |
| MS.gene28100 | MS.gene63513 | PPI |
| MS.gene63513 | MS.gene52445 | PPI |
| MS.gene57427 | MS.gene63513 | PPI |
| MS.gene051559 | MS.gene63513 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63513.t1 | MTR_3g009230 | 95.797 | 690 | 23 | 4 | 1 | 686 | 1 | 688 | 0.0 | 1343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63513.t1 | AT5G56290 | 64.799 | 696 | 216 | 12 | 1 | 688 | 1 | 675 | 0.0 | 876 |
Find 175 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGCTCCCTGTGTCTTTC+AGG | 0.148049 | 3.3:+4612173 | None:intergenic |
| GGGGCAATCGTTCCATATTT+TGG | 0.165220 | 3.3:+4607296 | None:intergenic |
| TAAGAGGTTGAGAGTAAAAT+TGG | 0.171322 | 3.3:+4613898 | None:intergenic |
| GCTGCTTTGAAGTATCTATT+TGG | 0.188621 | 3.3:-4607335 | MS.gene63513:CDS |
| AATGGGTGAACCTGAAATTT+AGG | 0.204896 | 3.3:+4610959 | None:intergenic |
| GGGAAGGCTCTTCGGATAAT+TGG | 0.210063 | 3.3:-4609273 | MS.gene63513:CDS |
| GAAATTTAGGGTCAGCATTC+TGG | 0.213774 | 3.3:+4610972 | None:intergenic |
| GAATGCTGACCCTAAATTTC+AGG | 0.215296 | 3.3:-4610969 | MS.gene63513:intron |
| TTACCGAATTCAGTCAAAAT+AGG | 0.221138 | 3.3:-4612088 | MS.gene63513:CDS |
| CCTGCCCCTCTTCCAGTATT+GGG | 0.251133 | 3.3:-4612523 | MS.gene63513:CDS |
| ACAGGGAGCTTGAAGATTAT+TGG | 0.274781 | 3.3:-4612163 | MS.gene63513:CDS |
| CTACAGAATCACCCAAAATA+TGG | 0.295481 | 3.3:-4607308 | MS.gene63513:CDS |
| TCCTGCCCCTCTTCCAGTAT+TGG | 0.302538 | 3.3:-4612524 | MS.gene63513:CDS |
| AAGCATGAGCACCCTGTATC+AGG | 0.323226 | 3.3:+4612123 | None:intergenic |
| TGGTGAATTCTTAAATAATA+AGG | 0.327549 | 3.3:-4609944 | MS.gene63513:intron |
| GCAGATGTTCACATAGTTCT+TGG | 0.334364 | 3.3:-4605927 | MS.gene63513:CDS |
| CAGATTGGTGAAGGAGCCTT+TGG | 0.341807 | 3.3:-4609295 | MS.gene63513:CDS |
| AAGAAGGCCAAGATCTGTTT+AGG | 0.345797 | 3.3:-4608513 | MS.gene63513:CDS |
| CATGACTCTGTTCAAAATCT+AGG | 0.359591 | 3.3:-4605628 | MS.gene63513:CDS |
| GCCCTTTCCTAAACAGATCT+TGG | 0.365099 | 3.3:+4608506 | None:intergenic |
| GCAACAGAAAGACAACAAAA+TGG | 0.369453 | 3.3:-4609391 | MS.gene63513:CDS |
| CATTACCTGCACCTGGAGAT+TGG | 0.376459 | 3.3:-4610011 | MS.gene63513:CDS |
| AAATTTAGGGTCAGCATTCT+GGG | 0.380235 | 3.3:+4610973 | None:intergenic |
| AATTCATTCGCCCACAGTTC+AGG | 0.386982 | 3.3:+4609415 | None:intergenic |
| TAGATTTAGGTCTGCGGGTG+TGG | 0.389130 | 3.3:-4613093 | MS.gene63513:CDS |
| TTGGAGGTGCTTCTTGCTCT+TGG | 0.391890 | 3.3:-4607729 | MS.gene63513:CDS |
| GTTTGCTATGTGTAAGAATA+AGG | 0.392732 | 3.3:-4605539 | MS.gene63513:CDS |
| CAGATGTTCACATAGTTCTT+GGG | 0.395395 | 3.3:-4605926 | MS.gene63513:CDS |
| GGAAGGCTCTTCGGATAATT+GGG | 0.397858 | 3.3:-4609272 | MS.gene63513:CDS |
| GTCAAGAAATGAGTGCAAAA+AGG | 0.399032 | 3.3:+4612573 | None:intergenic |
| GATGATGAAGCAGAAGGGTC+AGG | 0.405325 | 3.3:+4614176 | None:intergenic |
| AATGACTGGGCTGAGGAATT+CGG | 0.406128 | 3.3:-4609322 | MS.gene63513:CDS |
| CCATCAGATAAACCCAATAC+TGG | 0.406385 | 3.3:+4612511 | None:intergenic |
| TGTTCACAATACCACGCATT+TGG | 0.408423 | 3.3:+4611047 | None:intergenic |
| ATGGGTGAACCTGAAATTTA+GGG | 0.419265 | 3.3:+4610960 | None:intergenic |
| TACCGAATTCAGTCAAAATA+GGG | 0.427648 | 3.3:-4612087 | MS.gene63513:CDS |
| AGCCTTTGGGGAAGGCTCTT+CGG | 0.429856 | 3.3:-4609281 | MS.gene63513:CDS |
| CAAAGTTGCATGTTAATGAC+TGG | 0.437634 | 3.3:-4609336 | MS.gene63513:CDS |
| GATAAACCCAATACTGGAAG+AGG | 0.446588 | 3.3:+4612517 | None:intergenic |
| TGCAATAGCGGCTTATCAAC+AGG | 0.447194 | 3.3:-4605769 | MS.gene63513:CDS |
| TTTAGGTCTGCGGGTGTGGG+TGG | 0.448867 | 3.3:-4613089 | MS.gene63513:CDS |
| ATTACCTGCACCTGGAGATT+GGG | 0.455041 | 3.3:-4610010 | MS.gene63513:CDS |
| AGCCACAAGATTACTCTCTC+TGG | 0.457405 | 3.3:-4605836 | MS.gene63513:CDS |
| AGATTGGTGAAGGAGCCTTT+GGG | 0.458135 | 3.3:-4609294 | MS.gene63513:CDS |
| AACAACATGGTGCAAATGGT+TGG | 0.459971 | 3.3:-4612022 | MS.gene63513:CDS |
| ACGCGACCGTAGCAGCATAA+TGG | 0.461267 | 3.3:-4612473 | MS.gene63513:CDS |
| TATTCTGTTGCCCAATCTCC+AGG | 0.464052 | 3.3:+4610000 | None:intergenic |
| GCCAAGATCTGTTTAGGAAA+GGG | 0.464498 | 3.3:-4608507 | MS.gene63513:CDS |
| AGAAAATGACGATGATCAAC+AGG | 0.466750 | 3.3:-4608392 | MS.gene63513:intron |
| CCAGTATTGGGTTTATCTGA+TGG | 0.468008 | 3.3:-4612511 | MS.gene63513:CDS |
| GAACCAGGTAGCTGAGTAAG+AGG | 0.468445 | 3.3:+4613882 | None:intergenic |
| TCCGAGTAGTCTCCATCCTT+CGG | 0.469842 | 3.3:+4608426 | None:intergenic |
| GACAGCAATGTCCGTGGGAA+GGG | 0.472439 | 3.3:-4612203 | MS.gene63513:CDS |
| AGAAGCACCTCCAAGTTTGT+TGG | 0.472918 | 3.3:+4607738 | None:intergenic |
| GTCTCAAGGAAACCTGATAC+AGG | 0.475756 | 3.3:-4612135 | MS.gene63513:CDS |
| TGGGTGGGTTTGACGAAACA+TGG | 0.478911 | 3.3:-4613073 | MS.gene63513:CDS |
| CCCAATACTGGAAGAGGGGC+AGG | 0.480583 | 3.3:+4612523 | None:intergenic |
| GGATTTGGATGACCAACATA+AGG | 0.481106 | 3.3:+4608541 | None:intergenic |
| ACCCTGAAAATTCCGAAGGA+TGG | 0.481367 | 3.3:-4608438 | MS.gene63513:CDS |
| ATGTGAACATCTGCATCATC+AGG | 0.485344 | 3.3:+4605936 | None:intergenic |
| TTAGGTCTGCGGGTGTGGGT+GGG | 0.490354 | 3.3:-4613088 | MS.gene63513:CDS |
| CACCGTGATTATACTGCTGC+TGG | 0.493129 | 3.3:+4609977 | None:intergenic |
| AGTATAATCACGGTGATGCA+TGG | 0.494739 | 3.3:-4609969 | MS.gene63513:CDS |
| ACAACATGGTGCAAATGGTT+GGG | 0.498482 | 3.3:-4612021 | MS.gene63513:CDS |
| AGCAGCGGTCAGATAGTTCA+AGG | 0.500097 | 3.3:-4608591 | MS.gene63513:CDS |
| AAGAGGTTGAGAGTAAAATT+GGG | 0.500352 | 3.3:+4613899 | None:intergenic |
| TGAATTTCCTTACTTGAGCA+TGG | 0.502258 | 3.3:+4612413 | None:intergenic |
| TACTCTCTCTGGAACAAGCT+TGG | 0.503008 | 3.3:-4605825 | MS.gene63513:CDS |
| AACTCCGGCTCTATGATGGC+AGG | 0.507391 | 3.3:-4613025 | MS.gene63513:CDS |
| GAGCAACAACATGGTGCAAA+TGG | 0.509139 | 3.3:-4612026 | MS.gene63513:CDS |
| AGTCAACTCCGGCTCTATGA+TGG | 0.510156 | 3.3:-4613029 | MS.gene63513:CDS |
| ATTCTCTTGATAAGTTGTAC+AGG | 0.510273 | 3.3:+4605901 | None:intergenic |
| GCGATGCGTGATCTTATAAC+GGG | 0.510381 | 3.3:-4614212 | MS.gene63513:CDS |
| CTTTGAAGTATCTATTTGGA+TGG | 0.512648 | 3.3:-4607331 | MS.gene63513:CDS |
| GAGGAATTCGGTCAGCAGAT+TGG | 0.513609 | 3.3:-4609310 | MS.gene63513:CDS |
| GGAAGAGGGGCAGGATGAAA+AGG | 0.514676 | 3.3:+4612532 | None:intergenic |
| TGAGAATTAGCATCGAGAAA+AGG | 0.514885 | 3.3:+4613846 | None:intergenic |
| TCATCTTTGATACAAATTGA+AGG | 0.516310 | 3.3:+4610079 | None:intergenic |
| GGCGATGCGTGATCTTATAA+CGG | 0.516570 | 3.3:-4614213 | MS.gene63513:CDS |
| TCAGATTTAAATCCTTATGT+TGG | 0.516785 | 3.3:-4608553 | MS.gene63513:CDS |
| TGAACTATCTGACCGCTGCT+TGG | 0.519477 | 3.3:+4608594 | None:intergenic |
| TTGAATAGATTTAGGTCTGC+GGG | 0.519545 | 3.3:-4613098 | MS.gene63513:CDS |
| AATGAGTTAGCCCATGCATC+GGG | 0.521792 | 3.3:+4612050 | None:intergenic |
| CTCTTCGGATAATTGGGCTC+AGG | 0.525195 | 3.3:-4609266 | MS.gene63513:CDS |
| CTGCTCCACAGTAGCAATGT+TGG | 0.529086 | 3.3:+4611021 | None:intergenic |
| TTGAAGGCTTATCCTAGAGC+TGG | 0.529807 | 3.3:-4609439 | MS.gene63513:intron |
| GATATGATAATCCCGATGCA+TGG | 0.532117 | 3.3:-4612061 | MS.gene63513:CDS |
| CTTGGTGTCAGTCATACAAA+TGG | 0.532297 | 3.3:-4607711 | MS.gene63513:intron |
| TATATTATAGGAGAGGTTGA+AGG | 0.533082 | 3.3:-4613955 | MS.gene63513:intron |
| GGCTGATCCAACAAACTTGG+AGG | 0.533543 | 3.3:-4607745 | MS.gene63513:CDS |
| AGATTTAGGTCTGCGGGTGT+GGG | 0.534515 | 3.3:-4613092 | MS.gene63513:CDS |
| AGAGGCTGATCCAACAAACT+TGG | 0.535292 | 3.3:-4607748 | MS.gene63513:CDS |
| GGTGAAGGAGCCTTTGGGGA+AGG | 0.535807 | 3.3:-4609289 | MS.gene63513:CDS |
| GTGCTCATGCTTCAGACGGA+TGG | 0.538207 | 3.3:-4612112 | MS.gene63513:CDS |
| TGCCTGTTCAAAAGCTGCAA+TGG | 0.538654 | 3.3:+4605869 | None:intergenic |
| GTTGCCCAATCTCCAGGTGC+AGG | 0.539172 | 3.3:+4610006 | None:intergenic |
| GTCCCCTGCCATCATAGAGC+CGG | 0.540658 | 3.3:+4613021 | None:intergenic |
| GCCTAGCCATTATGCTGCTA+CGG | 0.544332 | 3.3:+4612467 | None:intergenic |
| CACAGTTCAGGTCCAGCTCT+AGG | 0.544577 | 3.3:+4609427 | None:intergenic |
| TTCCAGAGAGAGTAATCTTG+TGG | 0.546481 | 3.3:+4605834 | None:intergenic |
| TTCGGTCAGCAGATTGGTGA+AGG | 0.546573 | 3.3:-4609304 | MS.gene63513:CDS |
| TACAAAGAATCAGACATCTC+AGG | 0.547263 | 3.3:+4607272 | None:intergenic |
| GAGTCTGCATTACCTGCACC+TGG | 0.547559 | 3.3:-4610018 | MS.gene63513:CDS |
| CATCCAAATCCACTAAAAGA+AGG | 0.550824 | 3.3:-4608529 | MS.gene63513:CDS |
| CAACCTCTTACTCAGCTACC+TGG | 0.551358 | 3.3:-4613885 | MS.gene63513:CDS |
| GGCCAAGATCTGTTTAGGAA+AGG | 0.559478 | 3.3:-4608508 | MS.gene63513:CDS |
| AGCAAGTTGCTGCCAAGCAG+CGG | 0.561910 | 3.3:-4608606 | MS.gene63513:CDS |
| ATATGATAATCCCGATGCAT+GGG | 0.561935 | 3.3:-4612060 | MS.gene63513:CDS |
| TGACAGCAATGTCCGTGGGA+AGG | 0.563726 | 3.3:-4612204 | MS.gene63513:CDS |
| GTATAATCACGGTGATGCAT+GGG | 0.565968 | 3.3:-4609968 | MS.gene63513:CDS |
| AAATGAGTTAGCCCATGCAT+CGG | 0.570079 | 3.3:+4612049 | None:intergenic |
| TCCGAAGGATGGAGACTACT+CGG | 0.572229 | 3.3:-4608427 | MS.gene63513:CDS |
| TCTTCCTCTCAAAACCCTCT+CGG | 0.575386 | 3.3:-4614155 | MS.gene63513:CDS |
| GAAGGAGTAGATGTTGATGT+AGG | 0.576029 | 3.3:+4613927 | None:intergenic |
| GAGGAAGATGATGAAGCAGA+AGG | 0.578801 | 3.3:+4614170 | None:intergenic |
| AGCGATGATGCGTGCACAAG+AGG | 0.579422 | 3.3:-4607766 | MS.gene63513:CDS |
| AAGGTAGATAGAACTCTTTG+CGG | 0.580763 | 3.3:+4612592 | None:intergenic |
| TCATTTCTTGACAGCAGTCG+CGG | 0.584376 | 3.3:-4612562 | MS.gene63513:CDS |
| ATGATGAAGCAGAAGGGTCA+GGG | 0.585681 | 3.3:+4614177 | None:intergenic |
| GTCCTATGCCTGAAAGACAC+AGG | 0.592065 | 3.3:-4612181 | MS.gene63513:CDS |
| ACTCCGGCTCTATGATGGCA+GGG | 0.593041 | 3.3:-4613024 | MS.gene63513:CDS |
| CTTCATCAACCTACACTGGA+TGG | 0.593302 | 3.3:-4612984 | MS.gene63513:intron |
| ACAGCTTCATCAACCTACAC+TGG | 0.593849 | 3.3:-4612988 | MS.gene63513:CDS |
| AGGAAGATGATGAAGCAGAA+GGG | 0.596421 | 3.3:+4614171 | None:intergenic |
| TCCCTGTGTCTTTCAGGCAT+AGG | 0.599055 | 3.3:+4612179 | None:intergenic |
| AGATGTTCACATAGTTCTTG+GGG | 0.599275 | 3.3:-4605925 | MS.gene63513:CDS |
| TTGAGAATTCATCAACCCAC+TGG | 0.600819 | 3.3:+4609356 | None:intergenic |
| ATAAACCCAATACTGGAAGA+GGG | 0.600904 | 3.3:+4612518 | None:intergenic |
| TCTCTCGCTAATGCTCTCCT+CGG | 0.601744 | 3.3:-4614131 | MS.gene63513:CDS |
| CTCCGGCTCTATGATGGCAG+GGG | 0.603309 | 3.3:-4613023 | MS.gene63513:CDS |
| TAGAGCTGGACCTGAACTGT+GGG | 0.615883 | 3.3:-4609425 | MS.gene63513:CDS |
| AGCGCGATGGAAGTCAACTC+CGG | 0.619745 | 3.3:-4613040 | MS.gene63513:CDS |
| ATCCGAAGAGCCTTCCCCAA+AGG | 0.620364 | 3.3:+4609279 | None:intergenic |
| CAGGGTGCTCATGCTTCAGA+CGG | 0.622096 | 3.3:-4612116 | MS.gene63513:CDS |
| CATGTCCAACATTGCTACTG+TGG | 0.622268 | 3.3:-4611026 | MS.gene63513:CDS |
| ATGGAGCAGCTGATGACCAG+TGG | 0.622843 | 3.3:-4609372 | MS.gene63513:CDS |
| AAAGAATCAGACATCTCAGG+TGG | 0.623681 | 3.3:+4607275 | None:intergenic |
| CAGGCATAGGACCCTTCCCA+CGG | 0.623753 | 3.3:+4612192 | None:intergenic |
| TTGAGAGTAAAATTGGGATG+CGG | 0.624124 | 3.3:+4613905 | None:intergenic |
| AATCACGGTGATGCATGGGC+TGG | 0.625438 | 3.3:-4609964 | MS.gene63513:CDS |
| TTGAAATTACCATCCAGTGT+AGG | 0.626623 | 3.3:+4612975 | None:intergenic |
| CATTAGCGAGAGAACCGAGA+GGG | 0.626860 | 3.3:+4614141 | None:intergenic |
| GCAGCGGTCAGATAGTTCAA+GGG | 0.629171 | 3.3:-4608590 | MS.gene63513:CDS |
| AACTCATTTGAGCAACAACA+TGG | 0.630190 | 3.3:-4612035 | MS.gene63513:CDS |
| TTTGAATAGATTTAGGTCTG+CGG | 0.630946 | 3.3:-4613099 | MS.gene63513:CDS |
| ACCGTAGCAGCATAATGGCT+AGG | 0.631322 | 3.3:-4612468 | MS.gene63513:CDS |
| GATATTGACAGCAATGTCCG+TGG | 0.631785 | 3.3:-4612209 | MS.gene63513:CDS |
| GATTATTGGAATGAGTCTCA+AGG | 0.633092 | 3.3:-4612149 | MS.gene63513:CDS |
| AGAATCAGACATCTCAGGTG+GGG | 0.634275 | 3.3:+4607277 | None:intergenic |
| GAGTAAAATTGGGATGCGGA+AGG | 0.637020 | 3.3:+4613909 | None:intergenic |
| GTAGGTTGATGAAGCTGTGG+TGG | 0.637473 | 3.3:+4612993 | None:intergenic |
| AAAGTTGCATGTTAATGACT+GGG | 0.637762 | 3.3:-4609335 | MS.gene63513:CDS |
| AAGAATCAGACATCTCAGGT+GGG | 0.639797 | 3.3:+4607276 | None:intergenic |
| TACCAGCAGCAGTATAATCA+CGG | 0.640293 | 3.3:-4609979 | MS.gene63513:CDS |
| GATTGGTGAAGGAGCCTTTG+GGG | 0.640785 | 3.3:-4609293 | MS.gene63513:CDS |
| GGTTTATCGAATTCAGAACC+AGG | 0.641270 | 3.3:+4613867 | None:intergenic |
| GGGTGGGTTTGACGAAACAT+GGG | 0.643024 | 3.3:-4613072 | MS.gene63513:CDS |
| CAGCGGTCAGATAGTTCAAG+GGG | 0.645860 | 3.3:-4608589 | MS.gene63513:CDS |
| ATTGCTGTCAATATCTAGAG+AGG | 0.646477 | 3.3:+4612217 | None:intergenic |
| TTTCTTGACAGCAGTCGCGG+TGG | 0.646862 | 3.3:-4612559 | MS.gene63513:CDS |
| TCAAAGTGCTGATGCAATAG+CGG | 0.646885 | 3.3:-4605781 | MS.gene63513:CDS |
| TCCTATGCCTGAAAGACACA+GGG | 0.656552 | 3.3:-4612180 | MS.gene63513:CDS |
| CTAGAGCTGGACCTGAACTG+TGG | 0.658476 | 3.3:-4609426 | MS.gene63513:CDS |
| TGGGATGAGATACAGCGCGA+TGG | 0.659918 | 3.3:-4613053 | MS.gene63513:CDS |
| GCATGTTAATGACTGGGCTG+AGG | 0.661649 | 3.3:-4609329 | MS.gene63513:CDS |
| TAAACCCAATACTGGAAGAG+GGG | 0.662913 | 3.3:+4612519 | None:intergenic |
| TTTGTATCAAAGATGAGCCG+TGG | 0.670028 | 3.3:-4610072 | MS.gene63513:CDS |
| TCTCAAGGAAACCTGATACA+GGG | 0.670691 | 3.3:-4612134 | MS.gene63513:CDS |
| TGGAGCAGCTGATGACCAGT+GGG | 0.676941 | 3.3:-4609371 | MS.gene63513:CDS |
| AGTGTAGGTTGATGAAGCTG+TGG | 0.679169 | 3.3:+4612990 | None:intergenic |
| ATATTGACAGCAATGTCCGT+GGG | 0.692432 | 3.3:-4612208 | MS.gene63513:CDS |
| TCGTATGCTTGCAAATACGT+TGG | 0.700626 | 3.3:-4610996 | MS.gene63513:CDS |
| CATCGATAATCAACTCACCA+CGG | 0.709656 | 3.3:+4610055 | None:intergenic |
| TCATCAGTAGACCAAATGCG+TGG | 0.715426 | 3.3:-4611058 | MS.gene63513:CDS |
| GCATTAGCGAGAGAACCGAG+AGG | 0.740575 | 3.3:+4614140 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 4605502 | 4614237 | 4605502 | ID=MS.gene63513 |
| chr3.3 | mRNA | 4605502 | 4614237 | 4605502 | ID=MS.gene63513.t1;Parent=MS.gene63513 |
| chr3.3 | exon | 4614112 | 4614237 | 4614112 | ID=MS.gene63513.t1.exon1;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4614112 | 4614237 | 4614112 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4613845 | 4613967 | 4613845 | ID=MS.gene63513.t1.exon2;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4613845 | 4613967 | 4613845 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4612985 | 4613132 | 4612985 | ID=MS.gene63513.t1.exon3;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4612985 | 4613132 | 4612985 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4612426 | 4612619 | 4612426 | ID=MS.gene63513.t1.exon4;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4612426 | 4612619 | 4612426 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4612004 | 4612255 | 4612004 | ID=MS.gene63513.t1.exon5;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4612004 | 4612255 | 4612004 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4610970 | 4611089 | 4610970 | ID=MS.gene63513.t1.exon6;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4610970 | 4611089 | 4610970 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4609945 | 4610112 | 4609945 | ID=MS.gene63513.t1.exon7;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4609945 | 4610112 | 4609945 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4609256 | 4609455 | 4609256 | ID=MS.gene63513.t1.exon8;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4609256 | 4609455 | 4609256 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4608393 | 4608639 | 4608393 | ID=MS.gene63513.t1.exon9;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4608393 | 4608639 | 4608393 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4607712 | 4607796 | 4607712 | ID=MS.gene63513.t1.exon10;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4607712 | 4607796 | 4607712 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4607262 | 4607371 | 4607262 | ID=MS.gene63513.t1.exon11;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4607262 | 4607371 | 4607262 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4605766 | 4605994 | 4605766 | ID=MS.gene63513.t1.exon12;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4605766 | 4605994 | 4605766 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4605612 | 4605658 | 4605612 | ID=MS.gene63513.t1.exon13;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4605612 | 4605658 | 4605612 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| chr3.3 | exon | 4605502 | 4605560 | 4605502 | ID=MS.gene63513.t1.exon14;Parent=MS.gene63513.t1 |
| chr3.3 | CDS | 4605502 | 4605560 | 4605502 | ID=cds.MS.gene63513.t1;Parent=MS.gene63513.t1 |
| Gene Sequence |
| Protein sequence |
