Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64503.t1 | KEH24003.1 | 95.2 | 352 | 16 | 1 | 1 | 352 | 1 | 351 | 2.20E-160 | 575.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64503.t1 | Q9LS48 | 41.4 | 99 | 58 | 0 | 241 | 339 | 212 | 310 | 2.6e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64503.t1 | A0A072U4F2 | 95.2 | 352 | 16 | 1 | 1 | 352 | 1 | 351 | 1.6e-160 | 575.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64503 | MS.gene013374 | PPI |
| MS.gene64503 | MS.gene06470 | PPI |
| MS.gene64503 | MS.gene049351 | PPI |
| MS.gene028233 | MS.gene64503 | PPI |
| MS.gene08394 | MS.gene64503 | PPI |
| MS.gene64503 | MS.gene35220 | PPI |
| MS.gene64503 | MS.gene31030 | PPI |
| MS.gene64503 | MS.gene023230 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64503.t1 | MTR_7g100328 | 98.295 | 352 | 5 | 1 | 1 | 352 | 1 | 351 | 0.0 | 707 |
| MS.gene64503.t1 | MTR_1g067600 | 46.286 | 350 | 157 | 9 | 1 | 332 | 1 | 337 | 1.34e-81 | 253 |
| MS.gene64503.t1 | MTR_3g095070 | 36.458 | 288 | 154 | 7 | 68 | 346 | 57 | 324 | 3.87e-49 | 168 |
| MS.gene64503.t1 | MTR_8g101290 | 29.536 | 237 | 135 | 10 | 58 | 284 | 80 | 294 | 6.02e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64503.t1 | AT3G53560 | 63.043 | 230 | 80 | 2 | 119 | 348 | 108 | 332 | 3.80e-96 | 289 |
| MS.gene64503.t1 | AT2G37400 | 54.745 | 274 | 112 | 3 | 83 | 348 | 63 | 332 | 4.85e-96 | 289 |
| MS.gene64503.t1 | AT3G53560 | 63.043 | 230 | 80 | 2 | 119 | 348 | 156 | 380 | 7.85e-96 | 290 |
| MS.gene64503.t1 | AT5G02590 | 43.988 | 341 | 141 | 7 | 11 | 337 | 15 | 319 | 2.40e-85 | 261 |
| MS.gene64503.t1 | AT3G09490 | 44.279 | 201 | 108 | 1 | 127 | 327 | 98 | 294 | 2.45e-52 | 176 |
| MS.gene64503.t1 | AT4G39470 | 32.927 | 328 | 178 | 8 | 6 | 331 | 29 | 316 | 6.58e-52 | 176 |
| MS.gene64503.t1 | AT3G18420 | 33.110 | 299 | 166 | 7 | 49 | 339 | 38 | 310 | 5.11e-46 | 159 |
Find 94 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGGAGTAGGGTTATTT+TGG | 0.204717 | 7.3:+12496400 | None:intergenic |
| GTTATTGGTTGCTCAGATTA+AGG | 0.260166 | 7.3:-12495815 | MS.gene64503:CDS |
| AGAAGAAGGTTTCGGATGTT+AGG | 0.266026 | 7.3:-12495846 | MS.gene64503:CDS |
| AAGGAGAGGGAGGGTGATAA+GGG | 0.280767 | 7.3:+12496525 | None:intergenic |
| CTTCGAGTTGAAGCATTTCA+TGG | 0.282568 | 7.3:-12495967 | MS.gene64503:CDS |
| TTTGAAACGCAGGGTCGTTT+TGG | 0.296089 | 7.3:+12496427 | None:intergenic |
| TCATCAAAATACTCTTTATA+AGG | 0.300941 | 7.3:+12495619 | None:intergenic |
| AGAGGCGCTTAAAGCTTATC+AGG | 0.305548 | 7.3:-12495773 | MS.gene64503:CDS |
| ACAATTTCTTAGCAGATTCA+TGG | 0.328436 | 7.3:+12496016 | None:intergenic |
| AAAGGAGAGGGAGGGTGATA+AGG | 0.331906 | 7.3:+12496524 | None:intergenic |
| CGTAGAGCTTCAGCATCATT+TGG | 0.335421 | 7.3:+12496174 | None:intergenic |
| TGGAAAGGGTTTGGTGGAGT+AGG | 0.342617 | 7.3:+12496390 | None:intergenic |
| TCTTTATAAGGATGATTCTT+CGG | 0.343610 | 7.3:+12495631 | None:intergenic |
| GCTTAAAGCTTATCAGGATT+TGG | 0.343744 | 7.3:-12495767 | MS.gene64503:CDS |
| TGAAGCTCTACGTGCTTTAA+TGG | 0.348747 | 7.3:-12496163 | MS.gene64503:CDS |
| CTTTATAAGGATGATTCTTC+GGG | 0.354190 | 7.3:+12495632 | None:intergenic |
| GGGAGGAATTGTGGTGGTGG+TGG | 0.373494 | 7.3:+12496492 | None:intergenic |
| GGAGGGAGGAATTGTGGTGG+TGG | 0.386933 | 7.3:+12496489 | None:intergenic |
| GGAATTGTGGTGGTGGTGGA+TGG | 0.389269 | 7.3:+12496496 | None:intergenic |
| AGAAGAGAGAGGATAGGGTT+TGG | 0.397563 | 7.3:+12496370 | None:intergenic |
| TGGACTTGTGATGGCGAGTT+CGG | 0.402706 | 7.3:-12495947 | MS.gene64503:CDS |
| CAGGTTCAATTTCAATCAAA+CGG | 0.412642 | 7.3:+12496091 | None:intergenic |
| GGAAAGGGTTTGGTGGAGTA+GGG | 0.413750 | 7.3:+12496391 | None:intergenic |
| GAGAGGATAGGGTTTGGAAA+GGG | 0.419757 | 7.3:+12496376 | None:intergenic |
| AATTGCCACTCCATTTCTTC+AGG | 0.420552 | 7.3:+12496072 | None:intergenic |
| TGAAATTGAACCTGAAGAAA+TGG | 0.424458 | 7.3:-12496082 | MS.gene64503:CDS |
| TGGGAAGATGAGGATTTGAT+TGG | 0.425612 | 7.3:+12496447 | None:intergenic |
| GATAGGGTTTGGAAAGGGTT+TGG | 0.426503 | 7.3:+12496381 | None:intergenic |
| GAAGAAGGTTTCGGATGTTA+GGG | 0.426707 | 7.3:-12495845 | MS.gene64503:CDS |
| GAGGTTGGGTATGGAATTCA+TGG | 0.443970 | 7.3:+12496590 | None:intergenic |
| GAGGTTGGAGTGACGGAGGT+TGG | 0.447670 | 7.3:+12496575 | None:intergenic |
| GAGGGTGATAAGGGGAATGA+TGG | 0.448818 | 7.3:+12496534 | None:intergenic |
| CAAGAAACAGAAGAAGGTTT+CGG | 0.449162 | 7.3:-12495854 | MS.gene64503:CDS |
| GAGAGAGTGGCGGCGATGAC+AGG | 0.450025 | 7.3:+12496276 | None:intergenic |
| ATCTGCTAAGAAATTGTTTG+AGG | 0.450418 | 7.3:-12496010 | MS.gene64503:CDS |
| AGGTTGGAGTGACGGAGGTT+GGG | 0.454356 | 7.3:+12496576 | None:intergenic |
| AGAGAGGATAGGGTTTGGAA+AGG | 0.455764 | 7.3:+12496375 | None:intergenic |
| CTTCCCTCTCGAATTTCTGC+GGG | 0.460361 | 7.3:+12495572 | None:intergenic |
| ATGCATGTGGTTTCAACGAC+GGG | 0.470057 | 7.3:+12496345 | None:intergenic |
| GAATTGTGGTGGTGGTGGAT+GGG | 0.471518 | 7.3:+12496497 | None:intergenic |
| GGAGTGACGGAGGTTGGGTA+TGG | 0.475825 | 7.3:+12496581 | None:intergenic |
| TTCATCTTTCTTTCTAAGCA+AGG | 0.478456 | 7.3:+12495690 | None:intergenic |
| GAGGATGGAGGGAGGAATTG+TGG | 0.483001 | 7.3:+12496483 | None:intergenic |
| AGGGTTTGGAAAGGGTTTGG+TGG | 0.514075 | 7.3:+12496384 | None:intergenic |
| AATGGAGTGGCAATTGTTGA+AGG | 0.525932 | 7.3:-12496064 | MS.gene64503:CDS |
| CTCTTTAACAATCCTTTCAA+CGG | 0.526642 | 7.3:+12495901 | None:intergenic |
| GTTGTGATTGAGTGAGAGGT+TGG | 0.527474 | 7.3:+12496560 | None:intergenic |
| GAAGATGAGGATTTGATTGG+TGG | 0.529899 | 7.3:+12496450 | None:intergenic |
| AGAGGGAAGAAGCTGGTGCT+AGG | 0.536510 | 7.3:-12495558 | MS.gene64503:CDS |
| GGTTGCTCAGATTAAGGTGA+TGG | 0.536546 | 7.3:-12495809 | MS.gene64503:CDS |
| ATGGGAACGAAAGGAGAGGG+AGG | 0.539050 | 7.3:+12496515 | None:intergenic |
| CATGAAGAAGAAAGCGGTGG+CGG | 0.540016 | 7.3:+12496314 | None:intergenic |
| CTCTCCTCCGACCACCGTAA+CGG | 0.540098 | 7.3:-12496256 | MS.gene64503:CDS |
| TGAGTGAGAGGTTGGAGTGA+CGG | 0.540138 | 7.3:+12496568 | None:intergenic |
| GGTGGAAGCTTGAACGAGGA+TGG | 0.546675 | 7.3:+12496468 | None:intergenic |
| AGGAGAGGGAGGGTGATAAG+GGG | 0.549745 | 7.3:+12496526 | None:intergenic |
| TCTTCCCTCTCGAATTTCTG+CGG | 0.553717 | 7.3:+12495571 | None:intergenic |
| CAATCTGATGAACCGTTGAA+AGG | 0.557133 | 7.3:-12495913 | MS.gene64503:CDS |
| TGGATGGGAACGAAAGGAGA+GGG | 0.557548 | 7.3:+12496512 | None:intergenic |
| TGGTGGTGGATGGGAACGAA+AGG | 0.558966 | 7.3:+12496506 | None:intergenic |
| GACGGTTGTGATTGAGTGAG+AGG | 0.560939 | 7.3:+12496556 | None:intergenic |
| ATAATACCCTGACACAGATA+AGG | 0.564227 | 7.3:+12495718 | None:intergenic |
| GAAGCTTGAACGAGGATGGA+GGG | 0.567512 | 7.3:+12496472 | None:intergenic |
| GTGGATGGGAACGAAAGGAG+AGG | 0.569834 | 7.3:+12496511 | None:intergenic |
| AACGGAAAATGCTACGACGG+AGG | 0.575798 | 7.3:-12496238 | MS.gene64503:CDS |
| GCTCAGATTAAGGTGATGGA+AGG | 0.579155 | 7.3:-12495805 | MS.gene64503:CDS |
| GTGATAAGGGGAATGATGGA+CGG | 0.584735 | 7.3:+12496538 | None:intergenic |
| AGATAAGGCCTAAAATCTCT+CGG | 0.585108 | 7.3:+12495733 | None:intergenic |
| GGAAGCTTGAACGAGGATGG+AGG | 0.588597 | 7.3:+12496471 | None:intergenic |
| TTTAGGCCTTATCTGTGTCA+GGG | 0.591449 | 7.3:-12495724 | MS.gene64503:CDS |
| CGGCGATGACAGGAGTGTGA+TGG | 0.592621 | 7.3:+12496286 | None:intergenic |
| AGCATTTCATGGACTTGTGA+TGG | 0.594852 | 7.3:-12495956 | MS.gene64503:CDS |
| GTTGTGCAAGAAACAGAAGA+AGG | 0.595826 | 7.3:-12495860 | MS.gene64503:CDS |
| AAATTCGAGAGGGAAGAAGC+TGG | 0.597290 | 7.3:-12495565 | MS.gene64503:CDS |
| GTGAGAGGTTGGAGTGACGG+AGG | 0.609583 | 7.3:+12496571 | None:intergenic |
| TGGGAACGAAAGGAGAGGGA+GGG | 0.616150 | 7.3:+12496516 | None:intergenic |
| GCTTAGAAAGAAAGATGAAG+CGG | 0.617032 | 7.3:-12495686 | MS.gene64503:CDS |
| CTCAGATTAAGGTGATGGAA+GGG | 0.621477 | 7.3:-12495804 | MS.gene64503:CDS |
| TGAAATGCTTCAACTCGAAG+CGG | 0.637606 | 7.3:+12495970 | None:intergenic |
| TTGAACCTGAAGAAATGGAG+TGG | 0.639379 | 7.3:-12496077 | MS.gene64503:CDS |
| GCTTGAACGAGGATGGAGGG+AGG | 0.643989 | 7.3:+12496475 | None:intergenic |
| GGTGGTCGGAGGAGAGAGAG+TGG | 0.645390 | 7.3:+12496263 | None:intergenic |
| GATGCATGTGGTTTCAACGA+CGG | 0.656165 | 7.3:+12496344 | None:intergenic |
| AGCTCTACGTGCTTTAATGG+AGG | 0.672443 | 7.3:-12496160 | MS.gene64503:CDS |
| GGCGGCGATAACGATGCATG+TGG | 0.673470 | 7.3:+12496332 | None:intergenic |
| CGTAACGGAAAATGCTACGA+CGG | 0.678661 | 7.3:-12496241 | MS.gene64503:CDS |
| TGCATGTGGTTTCAACGACG+GGG | 0.681809 | 7.3:+12496346 | None:intergenic |
| TTTCCCGCAGAAATTCGAGA+GGG | 0.688033 | 7.3:-12495575 | MS.gene64503:CDS |
| GATGGAGGGAGGAATTGTGG+TGG | 0.694212 | 7.3:+12496486 | None:intergenic |
| GATTGGTGGAAGCTTGAACG+AGG | 0.699317 | 7.3:+12496464 | None:intergenic |
| GAAACGCATGAAGAAGAAAG+CGG | 0.702638 | 7.3:+12496308 | None:intergenic |
| GCATGTGGTTTCAACGACGG+GGG | 0.706740 | 7.3:+12496347 | None:intergenic |
| ACGCATGAAGAAGAAAGCGG+TGG | 0.712874 | 7.3:+12496311 | None:intergenic |
| GGTCGGAGGAGAGAGAGTGG+CGG | 0.713800 | 7.3:+12496266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATCAAAATACTCTTTATA+AGG | + | chr7.3:12496524-12496543 | None:intergenic | 20.0% |
| !!! | TATTTTGATGATAACATGAA+TGG | - | chr7.3:12496533-12496552 | MS.gene64503:CDS | 20.0% |
| ! | TCTTTATAAGGATGATTCTT+CGG | + | chr7.3:12496512-12496531 | None:intergenic | 25.0% |
| AAAGAGAGTTGAAAAAGCAA+TGG | - | chr7.3:12496256-12496275 | MS.gene64503:CDS | 30.0% | |
| ACAATTTCTTAGCAGATTCA+TGG | + | chr7.3:12496127-12496146 | None:intergenic | 30.0% | |
| AGAAAAATTGATGAAGCGAT+TGG | - | chr7.3:12496017-12496036 | MS.gene64503:CDS | 30.0% | |
| ATCTGCTAAGAAATTGTTTG+AGG | - | chr7.3:12496130-12496149 | MS.gene64503:CDS | 30.0% | |
| CAGGTTCAATTTCAATCAAA+CGG | + | chr7.3:12496052-12496071 | None:intergenic | 30.0% | |
| CTCTTTAACAATCCTTTCAA+CGG | + | chr7.3:12496242-12496261 | None:intergenic | 30.0% | |
| CTTTATAAGGATGATTCTTC+GGG | + | chr7.3:12496511-12496530 | None:intergenic | 30.0% | |
| TGAAATTGAACCTGAAGAAA+TGG | - | chr7.3:12496058-12496077 | MS.gene64503:CDS | 30.0% | |
| TTCATCTTTCTTTCTAAGCA+AGG | + | chr7.3:12496453-12496472 | None:intergenic | 30.0% | |
| ! | TTCAGCATCATTTGGATTTT+CGG | + | chr7.3:12495961-12495980 | None:intergenic | 30.0% |
| !!! | TGTTAGGGATTTTAGGTTAT+TGG | - | chr7.3:12496310-12496329 | MS.gene64503:CDS | 30.0% |
| AGATAAGGCCTAAAATCTCT+CGG | + | chr7.3:12496410-12496429 | None:intergenic | 35.0% | |
| ATAATACCCTGACACAGATA+AGG | + | chr7.3:12496425-12496444 | None:intergenic | 35.0% | |
| CAAGAAACAGAAGAAGGTTT+CGG | - | chr7.3:12496286-12496305 | MS.gene64503:CDS | 35.0% | |
| GCTTAAAGCTTATCAGGATT+TGG | - | chr7.3:12496373-12496392 | MS.gene64503:CDS | 35.0% | |
| GCTTAGAAAGAAAGATGAAG+CGG | - | chr7.3:12496454-12496473 | MS.gene64503:CDS | 35.0% | |
| ! | AAGAAGAACCGAGAGATTTT+AGG | - | chr7.3:12496399-12496418 | MS.gene64503:CDS | 35.0% |
| ! | GTTATTGGTTGCTCAGATTA+AGG | - | chr7.3:12496325-12496344 | MS.gene64503:CDS | 35.0% |
| ! | TTTCGGATGTTAGGGATTTT+AGG | - | chr7.3:12496303-12496322 | MS.gene64503:CDS | 35.0% |
| AATGGAGTGGCAATTGTTGA+AGG | - | chr7.3:12496076-12496095 | MS.gene64503:CDS | 40.0% | |
| AATTGCCACTCCATTTCTTC+AGG | + | chr7.3:12496071-12496090 | None:intergenic | 40.0% | |
| AGAAGAAGGTTTCGGATGTT+AGG | - | chr7.3:12496294-12496313 | MS.gene64503:CDS | 40.0% | |
| AGCATTTCATGGACTTGTGA+TGG | - | chr7.3:12496184-12496203 | MS.gene64503:CDS | 40.0% | |
| CAATCTGATGAACCGTTGAA+AGG | - | chr7.3:12496227-12496246 | MS.gene64503:CDS | 40.0% | |
| GAAACGCATGAAGAAGAAAG+CGG | + | chr7.3:12495835-12495854 | None:intergenic | 40.0% | |
| GAAGAAGGTTTCGGATGTTA+GGG | - | chr7.3:12496295-12496314 | MS.gene64503:CDS | 40.0% | |
| GAAGATGAGGATTTGATTGG+TGG | + | chr7.3:12495693-12495712 | None:intergenic | 40.0% | |
| GTTGTGCAAGAAACAGAAGA+AGG | - | chr7.3:12496280-12496299 | MS.gene64503:CDS | 40.0% | |
| TGAAATGCTTCAACTCGAAG+CGG | + | chr7.3:12496173-12496192 | None:intergenic | 40.0% | |
| TGAAGCTCTACGTGCTTTAA+TGG | - | chr7.3:12495977-12495996 | MS.gene64503:CDS | 40.0% | |
| TGGGAAGATGAGGATTTGAT+TGG | + | chr7.3:12495696-12495715 | None:intergenic | 40.0% | |
| TTGAACCTGAAGAAATGGAG+TGG | - | chr7.3:12496063-12496082 | MS.gene64503:CDS | 40.0% | |
| ! | TTGGTGGAGTAGGGTTATTT+TGG | + | chr7.3:12495743-12495762 | None:intergenic | 40.0% |
| ! | TTTAGGCCTTATCTGTGTCA+GGG | - | chr7.3:12496416-12496435 | MS.gene64503:CDS | 40.0% |
| !! | CTCAGATTAAGGTGATGGAA+GGG | - | chr7.3:12496336-12496355 | MS.gene64503:CDS | 40.0% |
| !! | CTTCGAGTTGAAGCATTTCA+TGG | - | chr7.3:12496173-12496192 | MS.gene64503:CDS | 40.0% |
| !! | GATGGAAGGGAATTTTTCAG+AGG | - | chr7.3:12496349-12496368 | MS.gene64503:CDS | 40.0% |
| !! | TGGTGGAGTAGGGTTATTTT+GGG | + | chr7.3:12495742-12495761 | None:intergenic | 40.0% |
| !! | TTTTAGGCCTTATCTGTGTC+AGG | - | chr7.3:12496415-12496434 | MS.gene64503:CDS | 40.0% |
| !!! | TTTGGGGTTTTTGAAACGCA+GGG | + | chr7.3:12495725-12495744 | None:intergenic | 40.0% |
| !!! | TTTTGGGGTTTTTGAAACGC+AGG | + | chr7.3:12495726-12495745 | None:intergenic | 40.0% |
| AAATTCGAGAGGGAAGAAGC+TGG | - | chr7.3:12496575-12496594 | MS.gene64503:CDS | 45.0% | |
| AGAAGAGAGAGGATAGGGTT+TGG | + | chr7.3:12495773-12495792 | None:intergenic | 45.0% | |
| AGAGAGGATAGGGTTTGGAA+AGG | + | chr7.3:12495768-12495787 | None:intergenic | 45.0% | |
| AGCTCTACGTGCTTTAATGG+AGG | - | chr7.3:12495980-12495999 | MS.gene64503:CDS | 45.0% | |
| ATGCATGTGGTTTCAACGAC+GGG | + | chr7.3:12495798-12495817 | None:intergenic | 45.0% | |
| CGTAGAGCTTCAGCATCATT+TGG | + | chr7.3:12495969-12495988 | None:intergenic | 45.0% | |
| GAGAGGATAGGGTTTGGAAA+GGG | + | chr7.3:12495767-12495786 | None:intergenic | 45.0% | |
| GATAGGGTTTGGAAAGGGTT+TGG | + | chr7.3:12495762-12495781 | None:intergenic | 45.0% | |
| GATGCATGTGGTTTCAACGA+CGG | + | chr7.3:12495799-12495818 | None:intergenic | 45.0% | |
| GGTTGCTCAGATTAAGGTGA+TGG | - | chr7.3:12496331-12496350 | MS.gene64503:CDS | 45.0% | |
| GTTGTGATTGAGTGAGAGGT+TGG | + | chr7.3:12495583-12495602 | None:intergenic | 45.0% | |
| TCTTCCCTCTCGAATTTCTG+CGG | + | chr7.3:12496572-12496591 | None:intergenic | 45.0% | |
| TTTCCCGCAGAAATTCGAGA+GGG | - | chr7.3:12496565-12496584 | MS.gene64503:CDS | 45.0% | |
| ! | CGTAACGGAAAATGCTACGA+CGG | - | chr7.3:12495899-12495918 | MS.gene64503:CDS | 45.0% |
| ! | CGTCGTAGCATTTTCCGTTA+CGG | + | chr7.3:12495901-12495920 | None:intergenic | 45.0% |
| ! | GTGATAAGGGGAATGATGGA+CGG | + | chr7.3:12495605-12495624 | None:intergenic | 45.0% |
| ! | TTTTCCCGCAGAAATTCGAG+AGG | - | chr7.3:12496564-12496583 | MS.gene64503:CDS | 45.0% |
| !! | AGAGGCGCTTAAAGCTTATC+AGG | - | chr7.3:12496367-12496386 | MS.gene64503:CDS | 45.0% |
| !! | GCTCAGATTAAGGTGATGGA+AGG | - | chr7.3:12496335-12496354 | MS.gene64503:CDS | 45.0% |
| !! | GGTGGAGTAGGGTTATTTTG+GGG | + | chr7.3:12495741-12495760 | None:intergenic | 45.0% |
| !! | TTGAAACGCAGGGTCGTTTT+GGG | + | chr7.3:12495715-12495734 | None:intergenic | 45.0% |
| !! | TTTGAAACGCAGGGTCGTTT+TGG | + | chr7.3:12495716-12495735 | None:intergenic | 45.0% |
| AAAGGAGAGGGAGGGTGATA+AGG | + | chr7.3:12495619-12495638 | None:intergenic | 50.0% | |
| AACGGAAAATGCTACGACGG+AGG | - | chr7.3:12495902-12495921 | MS.gene64503:CDS | 50.0% | |
| AAGGAGAGGGAGGGTGATAA+GGG | + | chr7.3:12495618-12495637 | None:intergenic | 50.0% | |
| ACGCATGAAGAAGAAAGCGG+TGG | + | chr7.3:12495832-12495851 | None:intergenic | 50.0% | |
| AGGGTTTGGAAAGGGTTTGG+TGG | + | chr7.3:12495759-12495778 | None:intergenic | 50.0% | |
| CATGAAGAAGAAAGCGGTGG+CGG | + | chr7.3:12495829-12495848 | None:intergenic | 50.0% | |
| CTTCCCTCTCGAATTTCTGC+GGG | + | chr7.3:12496571-12496590 | None:intergenic | 50.0% | |
| GAAGCTTGAACGAGGATGGA+GGG | + | chr7.3:12495671-12495690 | None:intergenic | 50.0% | |
| GACGGTTGTGATTGAGTGAG+AGG | + | chr7.3:12495587-12495606 | None:intergenic | 50.0% | |
| GAGGGTGATAAGGGGAATGA+TGG | + | chr7.3:12495609-12495628 | None:intergenic | 50.0% | |
| GATTGGTGGAAGCTTGAACG+AGG | + | chr7.3:12495679-12495698 | None:intergenic | 50.0% | |
| TGAGTGAGAGGTTGGAGTGA+CGG | + | chr7.3:12495575-12495594 | None:intergenic | 50.0% | |
| TGCATGTGGTTTCAACGACG+GGG | + | chr7.3:12495797-12495816 | None:intergenic | 50.0% | |
| TGGATGGGAACGAAAGGAGA+GGG | + | chr7.3:12495631-12495650 | None:intergenic | 50.0% | |
| ! | CGTAGCATTTTCCGTTACGG+TGG | + | chr7.3:12495898-12495917 | None:intergenic | 50.0% |
| ! | GCATTTTCCGTTACGGTGGT+CGG | + | chr7.3:12495894-12495913 | None:intergenic | 50.0% |
| ! | TGGACTTGTGATGGCGAGTT+CGG | - | chr7.3:12496193-12496212 | MS.gene64503:CDS | 50.0% |
| !! | GAATTGTGGTGGTGGTGGAT+GGG | + | chr7.3:12495646-12495665 | None:intergenic | 50.0% |
| !! | GGAAAGGGTTTGGTGGAGTA+GGG | + | chr7.3:12495752-12495771 | None:intergenic | 50.0% |
| !! | TGGAAAGGGTTTGGTGGAGT+AGG | + | chr7.3:12495753-12495772 | None:intergenic | 50.0% |
| !!! | AGGGTCGTTTTGGGAAGATG+AGG | + | chr7.3:12495706-12495725 | None:intergenic | 50.0% |
| AGAGGGAAGAAGCTGGTGCT+AGG | - | chr7.3:12496582-12496601 | MS.gene64503:CDS | 55.0% | |
| AGGAGAGGGAGGGTGATAAG+GGG | + | chr7.3:12495617-12495636 | None:intergenic | 55.0% | |
| ATGGGAACGAAAGGAGAGGG+AGG | + | chr7.3:12495628-12495647 | None:intergenic | 55.0% | |
| GAGGATGGAGGGAGGAATTG+TGG | + | chr7.3:12495660-12495679 | None:intergenic | 55.0% | |
| GATGGAGGGAGGAATTGTGG+TGG | + | chr7.3:12495657-12495676 | None:intergenic | 55.0% | |
| GCATGTGGTTTCAACGACGG+GGG | + | chr7.3:12495796-12495815 | None:intergenic | 55.0% | |
| GGAAGCTTGAACGAGGATGG+AGG | + | chr7.3:12495672-12495691 | None:intergenic | 55.0% | |
| GGGGGAGAAGAGAGAGGATA+GGG | + | chr7.3:12495778-12495797 | None:intergenic | 55.0% | |
| GGTGGAAGCTTGAACGAGGA+TGG | + | chr7.3:12495675-12495694 | None:intergenic | 55.0% | |
| GTGGATGGGAACGAAAGGAG+AGG | + | chr7.3:12495632-12495651 | None:intergenic | 55.0% | |
| TGGGAACGAAAGGAGAGGGA+GGG | + | chr7.3:12495627-12495646 | None:intergenic | 55.0% | |
| ! | AGGTTGGAGTGACGGAGGTT+GGG | + | chr7.3:12495567-12495586 | None:intergenic | 55.0% |
| ! | TTTTCCGTTACGGTGGTCGG+AGG | + | chr7.3:12495891-12495910 | None:intergenic | 55.0% |
| !! | GGAATTGTGGTGGTGGTGGA+TGG | + | chr7.3:12495647-12495666 | None:intergenic | 55.0% |
| !! | TGGTGGTGGATGGGAACGAA+AGG | + | chr7.3:12495637-12495656 | None:intergenic | 55.0% |
| AACGACGGGGGAGAAGAGAG+AGG | + | chr7.3:12495784-12495803 | None:intergenic | 60.0% | |
| CGGGGGAGAAGAGAGAGGAT+AGG | + | chr7.3:12495779-12495798 | None:intergenic | 60.0% | |
| CTCTCCTCCGACCACCGTAA+CGG | - | chr7.3:12495884-12495903 | MS.gene64503:CDS | 60.0% | |
| GCTTGAACGAGGATGGAGGG+AGG | + | chr7.3:12495668-12495687 | None:intergenic | 60.0% | |
| GGAGGGAGGAATTGTGGTGG+TGG | + | chr7.3:12495654-12495673 | None:intergenic | 60.0% | |
| GGCGGCGATAACGATGCATG+TGG | + | chr7.3:12495811-12495830 | None:intergenic | 60.0% | |
| GTGAGAGGTTGGAGTGACGG+AGG | + | chr7.3:12495572-12495591 | None:intergenic | 60.0% | |
| ! | CGGCGATGACAGGAGTGTGA+TGG | + | chr7.3:12495857-12495876 | None:intergenic | 60.0% |
| ! | GAGGTTGGAGTGACGGAGGT+TGG | + | chr7.3:12495568-12495587 | None:intergenic | 60.0% |
| ! | GGAGTGACGGAGGTTGGGTA+TGG | + | chr7.3:12495562-12495581 | None:intergenic | 60.0% |
| !! | GGGAGGAATTGTGGTGGTGG+TGG | + | chr7.3:12495651-12495670 | None:intergenic | 60.0% |
| GAGAGAGTGGCGGCGATGAC+AGG | + | chr7.3:12495867-12495886 | None:intergenic | 65.0% | |
| GGTCGGAGGAGAGAGAGTGG+CGG | + | chr7.3:12495877-12495896 | None:intergenic | 65.0% | |
| GGTGGTCGGAGGAGAGAGAG+TGG | + | chr7.3:12495880-12495899 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 12495552 | 12496610 | 12495552 | ID=MS.gene64503 |
| chr7.3 | mRNA | 12495552 | 12496610 | 12495552 | ID=MS.gene64503.t1;Parent=MS.gene64503 |
| chr7.3 | exon | 12495552 | 12496610 | 12495552 | ID=MS.gene64503.t1.exon1;Parent=MS.gene64503.t1 |
| chr7.3 | CDS | 12495552 | 12496610 | 12495552 | ID=cds.MS.gene64503.t1;Parent=MS.gene64503.t1 |
| Gene Sequence |
| Protein sequence |
