Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64887.t1 | XP_003612367.1 | 94.8 | 847 | 42 | 2 | 1 | 846 | 1 | 846 | 0.00E+00 | 1554.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64887.t1 | G7K186 | 94.8 | 847 | 42 | 2 | 1 | 846 | 1 | 846 | 0.0e+00 | 1554.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049958 | MS.gene64887 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene64887 | 0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene64887 | 0.80836 | 3.22E-50 | -1.69E-46 |
| MS.gene051541 | MS.gene64887 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene64887 | 0.806228 | 9.11E-50 | -1.69E-46 |
| MS.gene054489 | MS.gene64887 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene054641 | MS.gene64887 | 0.801151 | 1.03E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene64887 | 0.811257 | 7.67E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene64887 | 0.832307 | 1.02E-55 | -1.69E-46 |
| MS.gene058429 | MS.gene64887 | 0.83094 | 2.21E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene64887 | 0.879919 | 8.41E-70 | -1.69E-46 |
| MS.gene060932 | MS.gene64887 | 0.809938 | 1.48E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64887.t1 | MTR_5g024240 | 96.340 | 847 | 29 | 2 | 1 | 846 | 1 | 846 | 0.0 | 1670 |
| MS.gene64887.t1 | MTR_5g025350 | 73.200 | 250 | 35 | 3 | 453 | 696 | 12 | 235 | 6.60e-113 | 345 |
| MS.gene64887.t1 | MTR_5g025380 | 74.453 | 137 | 19 | 2 | 615 | 750 | 5 | 126 | 9.25e-56 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64887.t1 | AT2G17550 | 40.956 | 879 | 380 | 31 | 1 | 845 | 1 | 774 | 9.33e-166 | 501 |
| MS.gene64887.t1 | AT2G17550 | 41.242 | 805 | 335 | 30 | 74 | 845 | 1 | 700 | 2.84e-150 | 458 |
Find 142 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTATTCACTTGATAATT+TGG | 0.153873 | 5.3:+14081610 | MS.gene64887:CDS |
| ATTCAGACTCAGACGGTTTC+TGG | 0.172392 | 5.3:-14081187 | None:intergenic |
| CTGGTTTATACTTTGGTTCT+TGG | 0.181940 | 5.3:+14081264 | MS.gene64887:CDS |
| TAAAAGAATAAGTGAAAATA+TGG | 0.225343 | 5.3:+14078990 | MS.gene64887:CDS |
| GAATCACTTTCAGTTGTTCT+TGG | 0.245622 | 5.3:+14081452 | MS.gene64887:CDS |
| GTTATAAGATTTGATCATTA+AGG | 0.248170 | 5.3:-14079406 | None:intergenic |
| AGGAACTGTTGAAGTTAGTA+TGG | 0.285855 | 5.3:+14081546 | MS.gene64887:CDS |
| TTTGTGAGCATGGACTTTCT+TGG | 0.293337 | 5.3:-14077978 | None:intergenic |
| AGAGATTTACTTGTTGCTTC+TGG | 0.294038 | 5.3:+14081245 | MS.gene64887:CDS |
| TGGAATAAGTCTTTGTTAAG+AGG | 0.301570 | 5.3:+14081284 | MS.gene64887:CDS |
| TGAATCTCTACTGATAAATT+CGG | 0.305013 | 5.3:-14079805 | None:intergenic |
| AAATACAAACAGGATCTTTC+AGG | 0.313229 | 5.3:+14079970 | MS.gene64887:CDS |
| AGCAAAACTGTATCTCAAAT+TGG | 0.317168 | 5.3:-14080231 | None:intergenic |
| GCTAGAAACACTGCCGATTT+CGG | 0.329590 | 5.3:-14079265 | None:intergenic |
| GAAATGAGTCGAATTCATTA+TGG | 0.333811 | 5.3:-14079089 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 5.3:+14080811 | MS.gene64887:CDS |
| GATGGATGGAGCCAGAGTTT+TGG | 0.337357 | 5.3:+14079138 | MS.gene64887:CDS |
| CAATGAAGAGATCAATATAT+TGG | 0.342843 | 5.3:+14081673 | MS.gene64887:CDS |
| CTTACAGGTAATTCTCCTTC+TGG | 0.343654 | 5.3:-14078312 | None:intergenic |
| TCTGAAAATAATCGTTATTC+AGG | 0.352379 | 5.3:+14078829 | MS.gene64887:CDS |
| ATATCAAGCAGCAAGGTTTC+AGG | 0.359927 | 5.3:+14079227 | MS.gene64887:CDS |
| GACATCAGCTCTGGTTTAAC+TGG | 0.360505 | 5.3:+14080915 | MS.gene64887:CDS |
| AAGCCTTGTGGCGAGGTTGA+TGG | 0.376575 | 5.3:+14078921 | MS.gene64887:CDS |
| CTTAGAGTTCTGCTCTTTGA+AGG | 0.378221 | 5.3:-14079366 | None:intergenic |
| AGCCTTGTGGCGAGGTTGAT+GGG | 0.378689 | 5.3:+14078922 | MS.gene64887:CDS |
| TCAAGATCAGGAACATCATT+TGG | 0.380795 | 5.3:+14080074 | MS.gene64887:CDS |
| ATGGAAGGAGTTCAGTTAGT+TGG | 0.381437 | 5.3:+14079040 | MS.gene64887:CDS |
| TGTTCAAAGTTTGCCGAAAT+CGG | 0.382797 | 5.3:+14079252 | MS.gene64887:CDS |
| GTTGCTTCTGGTTTATACTT+TGG | 0.384654 | 5.3:+14081257 | MS.gene64887:CDS |
| TATTCAATCATGAAGAGAAT+TGG | 0.394633 | 5.3:+14079487 | MS.gene64887:CDS |
| GATACATATGCAAAGCCTAT+TGG | 0.399418 | 5.3:+14081308 | MS.gene64887:CDS |
| GAATCTCTACTGATAAATTC+GGG | 0.401716 | 5.3:-14079804 | None:intergenic |
| GAGAATTGGACTAGTTCAAC+AGG | 0.404604 | 5.3:+14079501 | MS.gene64887:CDS |
| TTGAGTTCAATCCCTTGGTC+TGG | 0.405396 | 5.3:+14081644 | MS.gene64887:CDS |
| TCGGGAACATCCACAGGAAA+TGG | 0.408972 | 5.3:+14079173 | MS.gene64887:CDS |
| AACATTTGAGTTCAATCCCT+TGG | 0.418429 | 5.3:+14081639 | MS.gene64887:CDS |
| TGGAAGGAGTTCAGTTAGTT+GGG | 0.424198 | 5.3:+14079041 | MS.gene64887:CDS |
| ATCAACCTCGCCACAAGGCT+TGG | 0.428948 | 5.3:-14078919 | None:intergenic |
| TCGTCTCTTGAGGACAAATC+AGG | 0.438083 | 5.3:-14080867 | None:intergenic |
| GACAAATCAGGAGTTGATAC+TGG | 0.442829 | 5.3:-14080855 | None:intergenic |
| GATGTTCCTGATCTTGATAC+AGG | 0.455850 | 5.3:-14080068 | None:intergenic |
| CAACCGCTTCAAGCTTCCTC+CGG | 0.459478 | 5.3:-14080142 | None:intergenic |
| AAGGATCTTACAAGGTTCCT+TGG | 0.460932 | 5.3:-14080038 | None:intergenic |
| GATCAATATATTGGAAAGAG+AGG | 0.461233 | 5.3:+14081682 | MS.gene64887:CDS |
| AAAAGAATAAGTGAAAATAT+GGG | 0.462177 | 5.3:+14078991 | MS.gene64887:CDS |
| TCATGATTGAATATGCAATC+AGG | 0.468328 | 5.3:-14079477 | None:intergenic |
| CTGATAAATTCGGGGACACT+TGG | 0.469625 | 5.3:-14079795 | None:intergenic |
| TTTGAAATGTGCAGATGAAT+GGG | 0.480380 | 5.3:+14079926 | MS.gene64887:CDS |
| GAAGAAACAGAAATACAAAC+AGG | 0.481676 | 5.3:+14079960 | MS.gene64887:CDS |
| AATAATCGTTATTCAGGCGC+TGG | 0.481780 | 5.3:+14078835 | MS.gene64887:CDS |
| TCTGCTCCTGTATCAAGATC+AGG | 0.482542 | 5.3:+14080062 | MS.gene64887:CDS |
| ATTTGACGAGCAATAAGCTT+AGG | 0.486795 | 5.3:-14079672 | None:intergenic |
| GGAATAAGTCTTTGTTAAGA+GGG | 0.490427 | 5.3:+14081285 | MS.gene64887:CDS |
| CTTGTGATGTCTCTCATTGT+CGG | 0.490601 | 5.3:-14080320 | None:intergenic |
| AATTTATCAGTAGAGATTCA+AGG | 0.492213 | 5.3:+14079808 | MS.gene64887:CDS |
| AGTTCAACAGGGACTTTACC+AGG | 0.494157 | 5.3:+14079513 | MS.gene64887:CDS |
| GAAACCGTCTGAGTCTGAAT+TGG | 0.496615 | 5.3:+14081190 | MS.gene64887:CDS |
| TCTCTTATGTAAGATTCTGC+TGG | 0.500088 | 5.3:-14081227 | None:intergenic |
| CAGGTTTCAAGATAACGATC+CGG | 0.509636 | 5.3:-14079452 | None:intergenic |
| CTGCCATGTGCTTGATCGAT+TGG | 0.510292 | 5.3:-14078890 | None:intergenic |
| CTTCCTCCGGATATGAGCCC+CGG | 0.510820 | 5.3:-14080129 | None:intergenic |
| GCCTTTGTTCTCCAAAACTC+TGG | 0.512265 | 5.3:-14079149 | None:intergenic |
| GCAACAGGTTTAGTGTCTAC+AGG | 0.513735 | 5.3:-14078958 | None:intergenic |
| AGGTTTCAAGATAACGATCC+GGG | 0.519687 | 5.3:-14079451 | None:intergenic |
| TCCATGTTGTCGCCGCCTCA+AGG | 0.519717 | 5.3:+14081521 | MS.gene64887:CDS |
| AACAGTTCCTTTCCTTGAGG+CGG | 0.522924 | 5.3:-14081533 | None:intergenic |
| GAATGATGAAAATTCTATGA+AGG | 0.523675 | 5.3:+14081379 | MS.gene64887:CDS |
| TTCTGAAGTTCCATTTCCTG+TGG | 0.524225 | 5.3:-14079183 | None:intergenic |
| TGAGCAGACTGAATTTGAGT+TGG | 0.524933 | 5.3:-14079730 | None:intergenic |
| TGGTAAGAGAAATCAATCAA+TGG | 0.527992 | 5.3:+14080271 | MS.gene64887:CDS |
| ACACTGCTGCACACAGATGC+AGG | 0.529299 | 5.3:-14080795 | None:intergenic |
| CGGATCGTTATCTTGAAACC+TGG | 0.530582 | 5.3:+14079453 | MS.gene64887:CDS |
| TGAATTCAATCAAGGGAGGA+TGG | 0.531417 | 5.3:+14077955 | MS.gene64887:CDS |
| TTGTTGATTTGGTAGAGCTA+AGG | 0.532806 | 5.3:+14081114 | MS.gene64887:intron |
| TTGAATATGCAATCAGGACC+AGG | 0.536062 | 5.3:-14079471 | None:intergenic |
| CACAGCAGTCTCGTCTCTTG+AGG | 0.541373 | 5.3:-14080877 | None:intergenic |
| GAAAGCTTCTACTAGAGGAC+CGG | 0.541402 | 5.3:+14080096 | MS.gene64887:CDS |
| ATTATCAAGTAGAAGAAGAC+TGG | 0.542682 | 5.3:+14078806 | MS.gene64887:CDS |
| CTGCACACAGATGCAGGACT+CGG | 0.548951 | 5.3:-14080789 | None:intergenic |
| AGAGAATCGAAACAACGAAA+AGG | 0.551559 | 5.3:+14079302 | MS.gene64887:CDS |
| CTGAATCTAGACAGTGTCAA+AGG | 0.551664 | 5.3:-14081479 | None:intergenic |
| AGTGAATAAAGAGACATATC+CGG | 0.556492 | 5.3:-14081599 | None:intergenic |
| TTTCACAAAGTTAAAGATGA+CGG | 0.556814 | 5.3:+14079108 | MS.gene64887:CDS |
| AAGGCGTCGGGAACATCCAC+AGG | 0.557978 | 5.3:+14079167 | MS.gene64887:CDS |
| TTCAAGATAACGATCCGGGT+TGG | 0.558627 | 5.3:-14079447 | None:intergenic |
| AAAGATGACGGCGATGATGA+TGG | 0.560500 | 5.3:+14079120 | MS.gene64887:CDS |
| GTGTCTCAATATCACTTCCT+CGG | 0.563040 | 5.3:-14079626 | None:intergenic |
| CATTGATTATTCCAGACCAA+GGG | 0.564059 | 5.3:-14081655 | None:intergenic |
| GCCTTGTGGCGAGGTTGATG+GGG | 0.564771 | 5.3:+14078923 | MS.gene64887:CDS |
| GCAATAAGCTTAGGATCAGA+TGG | 0.568354 | 5.3:-14079663 | None:intergenic |
| ACAAATCAAGCAAAATCTTG+TGG | 0.568803 | 5.3:-14081424 | None:intergenic |
| GTTGTCGCCGCCTCAAGGAA+AGG | 0.569359 | 5.3:+14081526 | MS.gene64887:CDS |
| ACAGAGAGTTGTTGTCTCCA+AGG | 0.575318 | 5.3:+14080021 | MS.gene64887:CDS |
| TGTTTCGTTATATCCTTCAC+CGG | 0.577070 | 5.3:+14081580 | MS.gene64887:CDS |
| CCGTCGTTCATAAGAACTGT+TGG | 0.578230 | 5.3:-14080347 | None:intergenic |
| GGAACTGTTGAAGTTAGTAT+GGG | 0.578282 | 5.3:+14081547 | MS.gene64887:CDS |
| GAGCCCCGGTTAAAATGTGC+CGG | 0.579772 | 5.3:-14080115 | None:intergenic |
| TCATTGATTATTCCAGACCA+AGG | 0.588363 | 5.3:-14081656 | None:intergenic |
| TCCTTGAGGCGGCGACAACA+TGG | 0.589447 | 5.3:-14081522 | None:intergenic |
| TCTTCTATACTATGTCTACC+TGG | 0.595004 | 5.3:-14079531 | None:intergenic |
| TGATGTCTCTCATTGTCGGA+CGG | 0.595229 | 5.3:-14080316 | None:intergenic |
| ATTTGGAAAGCTTCTACTAG+AGG | 0.598028 | 5.3:+14080091 | MS.gene64887:CDS |
| TAAAGAGACATATCCGGTGA+AGG | 0.598715 | 5.3:-14081593 | None:intergenic |
| GTTGAAACATCTCAGAAGTA+CGG | 0.598762 | 5.3:+14078288 | MS.gene64887:CDS |
| CAAACAAGGGAACAAATGGA+AGG | 0.600461 | 5.3:+14079025 | MS.gene64887:CDS |
| ACCCCATCAACCTCGCCACA+AGG | 0.600954 | 5.3:-14078924 | None:intergenic |
| CAATCAATGGTAGAATCACA+TGG | 0.601271 | 5.3:+14080284 | MS.gene64887:CDS |
| TCTTGATACAGGAGCAGACA+AGG | 0.604956 | 5.3:-14080057 | None:intergenic |
| TCTCAGAAGTACGGTCCAGA+AGG | 0.606677 | 5.3:+14078297 | MS.gene64887:CDS |
| AAAGAATAAGTGAAAATATG+GGG | 0.610226 | 5.3:+14078992 | MS.gene64887:CDS |
| TTCAACAGTTCCTTTCCTTG+AGG | 0.611963 | 5.3:-14081536 | None:intergenic |
| TTGAAGCATATCAAGCAGCA+AGG | 0.612487 | 5.3:+14079220 | MS.gene64887:CDS |
| GGAAAAGGTTATGCGGTCCG+AGG | 0.614051 | 5.3:+14079609 | MS.gene64887:CDS |
| CACATAATACAAGTATGCAA+AGG | 0.618748 | 5.3:+14079334 | MS.gene64887:CDS |
| ATGACGGCGATGATGATGGA+TGG | 0.620775 | 5.3:+14079124 | MS.gene64887:CDS |
| CTGCACCAAGCCTTGTGGCG+AGG | 0.620894 | 5.3:+14078914 | MS.gene64887:CDS |
| CTGATGTCTCTGAAAACTTG+TGG | 0.622401 | 5.3:-14080900 | None:intergenic |
| TGCACCAATTCAGACTCAGA+CGG | 0.623432 | 5.3:-14081194 | None:intergenic |
| GAATAAGTCTTTGTTAAGAG+GGG | 0.627428 | 5.3:+14081286 | MS.gene64887:CDS |
| ACTTGATTCTAGTGATGTCG+AGG | 0.630630 | 5.3:+14081151 | MS.gene64887:CDS |
| ACAAGATCATACGAAGGTGA+AGG | 0.634923 | 5.3:+14079759 | MS.gene64887:CDS |
| TATCCAATCGATCAAGCACA+TGG | 0.637814 | 5.3:+14078887 | MS.gene64887:CDS |
| GAGCAGACAAGGATCTTACA+AGG | 0.642350 | 5.3:-14080046 | None:intergenic |
| AACTGTCGGAAAAGGTTATG+CGG | 0.647191 | 5.3:+14079602 | MS.gene64887:CDS |
| TAACCGGGGCTCATATCCGG+AGG | 0.647535 | 5.3:+14080126 | MS.gene64887:CDS |
| TTGGAGACAACAACTCTCTG+TGG | 0.648215 | 5.3:-14080019 | None:intergenic |
| TAGATGCATCTTCTCCAACC+CGG | 0.653096 | 5.3:+14079433 | MS.gene64887:CDS |
| ACAATGAGAGACATCACAAG+TGG | 0.658345 | 5.3:+14080323 | MS.gene64887:CDS |
| GCTCACAAAAGACATCATAG+TGG | 0.659606 | 5.3:+14077992 | MS.gene64887:CDS |
| TCTTGTTGAAGAACTCACAA+AGG | 0.659944 | 5.3:+14081727 | MS.gene64887:CDS |
| GCAGACTGCACCAAGCCTTG+TGG | 0.667683 | 5.3:+14078909 | MS.gene64887:CDS |
| AATCTAGACAGTGTCAAAGG+TGG | 0.669822 | 5.3:-14081476 | None:intergenic |
| TATCCGGAGGAAGCTTGAAG+CGG | 0.676693 | 5.3:+14080139 | MS.gene64887:CDS |
| CGTTTGAAATGCGAACTGCA+AGG | 0.679951 | 5.3:+14079576 | MS.gene64887:CDS |
| AATCTCTACTGATAAATTCG+GGG | 0.689534 | 5.3:-14079803 | None:intergenic |
| CACACAGATGCAGGACTCGG+AGG | 0.714130 | 5.3:-14080786 | None:intergenic |
| CCAACAGTTCTTATGAACGA+CGG | 0.720547 | 5.3:+14080347 | MS.gene64887:CDS |
| GAATCAACAAGATCATACGA+AGG | 0.725807 | 5.3:+14079753 | MS.gene64887:CDS |
| GTGAAGGATATAACGAAACA+CGG | 0.727910 | 5.3:-14081577 | None:intergenic |
| ACAGTTCTTATGAACGACGG+TGG | 0.731871 | 5.3:+14080350 | MS.gene64887:CDS |
| AGAATTGGACTAGTTCAACA+GGG | 0.749710 | 5.3:+14079502 | MS.gene64887:CDS |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 5.3:+14080761 | MS.gene64887:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAAGTGAAAATAT+GGG | + | chr5.3:14078991-14079010 | MS.gene64887:CDS | 15.0% |
| !! | AACAAGATAATAAAAAATCA+AGG | + | chr5.3:14080550-14080569 | MS.gene64887:intron | 15.0% |
| !! | ACAAGATAATAAAAAATCAA+GGG | + | chr5.3:14080551-14080570 | MS.gene64887:intron | 15.0% |
| !! | TAAAAGAATAAGTGAAAATA+TGG | + | chr5.3:14078990-14079009 | MS.gene64887:CDS | 15.0% |
| !! | AAAGAATAAGTGAAAATATG+GGG | + | chr5.3:14078992-14079011 | MS.gene64887:CDS | 20.0% |
| !! | ACTAAATTCAATTCAACAAA+TGG | - | chr5.3:14078765-14078784 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATATTCTAAA+AGG | - | chr5.3:14078554-14078573 | None:intergenic | 20.0% |
| !! | GTTATAAGATTTGATCATTA+AGG | - | chr5.3:14079409-14079428 | None:intergenic | 20.0% |
| !! | TTCGTATAAAAACAATATGA+TGG | - | chr5.3:14078374-14078393 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGAATTCAATCAA+GGG | + | chr5.3:14077948-14077967 | MS.gene64887:CDS | 20.0% |
| !!! | TCTTAGCTTTATATTTATTG+TGG | + | chr5.3:14080511-14080530 | MS.gene64887:intron | 20.0% |
| !!! | TCTTTATTCACTTGATAATT+TGG | + | chr5.3:14081610-14081629 | MS.gene64887:CDS | 20.0% |
| ! | AATTTATCAGTAGAGATTCA+AGG | + | chr5.3:14079808-14079827 | MS.gene64887:CDS | 25.0% |
| ! | AGTTTGAAAAGATATTCACT+CGG | - | chr5.3:14081073-14081092 | None:intergenic | 25.0% |
| ! | ATCTTAAAACCGCAATAAAA+AGG | + | chr5.3:14080643-14080662 | MS.gene64887:intron | 25.0% |
| ! | ATGAAATATAAAGGTCATCA+TGG | - | chr5.3:14080700-14080719 | None:intergenic | 25.0% |
| ! | CAACTCTGAATGAAATATAA+AGG | - | chr5.3:14080709-14080728 | None:intergenic | 25.0% |
| ! | CAAGAACTATGGTTTATATT+TGG | - | chr5.3:14078719-14078738 | None:intergenic | 25.0% |
| ! | CAATGAAGAGATCAATATAT+TGG | + | chr5.3:14081673-14081692 | MS.gene64887:CDS | 25.0% |
| ! | CATATCGAACATAATTACAA+CGG | - | chr5.3:14078529-14078548 | None:intergenic | 25.0% |
| ! | GAATGATGAAAATTCTATGA+AGG | + | chr5.3:14081379-14081398 | MS.gene64887:CDS | 25.0% |
| ! | TACTAAAAACAATCAAGCAA+AGG | - | chr5.3:14078198-14078217 | None:intergenic | 25.0% |
| ! | TATTCAATCATGAAGAGAAT+TGG | + | chr5.3:14079487-14079506 | MS.gene64887:CDS | 25.0% |
| ! | TCAAAAACAGAATTTCCAAT+AGG | - | chr5.3:14081326-14081345 | None:intergenic | 25.0% |
| ! | TCTGAAAATAATCGTTATTC+AGG | + | chr5.3:14078829-14078848 | MS.gene64887:CDS | 25.0% |
| ! | TGAATCTCTACTGATAAATT+CGG | - | chr5.3:14079808-14079827 | None:intergenic | 25.0% |
| ! | TTTCACAAAGTTAAAGATGA+CGG | + | chr5.3:14079108-14079127 | MS.gene64887:CDS | 25.0% |
| !! | AGCTTTATATTTATTGTGGA+GGG | + | chr5.3:14080515-14080534 | MS.gene64887:intron | 25.0% |
| !! | CTTTTCTTGAATCAAAACTA+TGG | - | chr5.3:14080981-14081000 | None:intergenic | 25.0% |
| !! | GATTTATTTGCTTGTTGATT+TGG | + | chr5.3:14081103-14081122 | MS.gene64887:intron | 25.0% |
| !! | TAGTATAGAAGATTTTCTTG+AGG | + | chr5.3:14079542-14079561 | MS.gene64887:CDS | 25.0% |
| !! | TCACTTATTCTTTTATCTGA+TGG | - | chr5.3:14078985-14079004 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTTGAAGAAG+TGG | + | chr5.3:14081331-14081350 | MS.gene64887:CDS | 25.0% |
| !!! | CACTTTTTTGAATTCAATCA+AGG | + | chr5.3:14077947-14077966 | MS.gene64887:CDS | 25.0% |
| !!! | TAGCTTTATATTTATTGTGG+AGG | + | chr5.3:14080514-14080533 | MS.gene64887:intron | 25.0% |
| AAAAACAATCAAGCAAAGGA+GGG | - | chr5.3:14078194-14078213 | None:intergenic | 30.0% | |
| AAAAGAAGGAGGAAATATGA+TGG | - | chr5.3:14078455-14078474 | None:intergenic | 30.0% | |
| AAATACAAACAGGATCTTTC+AGG | + | chr5.3:14079970-14079989 | MS.gene64887:CDS | 30.0% | |
| AATCTCTACTGATAAATTCG+GGG | - | chr5.3:14079806-14079825 | None:intergenic | 30.0% | |
| ACAAATCAAGCAAAATCTTG+TGG | - | chr5.3:14081427-14081446 | None:intergenic | 30.0% | |
| ACATATGAAGAGAAACTTAC+AGG | - | chr5.3:14078330-14078349 | None:intergenic | 30.0% | |
| ACCTTTCATCATAACATGAA+TGG | - | chr5.3:14078062-14078081 | None:intergenic | 30.0% | |
| AGCAAAACTGTATCTCAAAT+TGG | - | chr5.3:14080234-14080253 | None:intergenic | 30.0% | |
| AGTGAATAAAGAGACATATC+CGG | - | chr5.3:14081602-14081621 | None:intergenic | 30.0% | |
| ATAAACCATAGTTCTTGTTC+TGG | + | chr5.3:14078722-14078741 | MS.gene64887:intron | 30.0% | |
| ATTATCAAGTAGAAGAAGAC+TGG | + | chr5.3:14078806-14078825 | MS.gene64887:CDS | 30.0% | |
| CACATAATACAAGTATGCAA+AGG | + | chr5.3:14079334-14079353 | MS.gene64887:CDS | 30.0% | |
| CTCTATAAATGACAGTTTCA+TGG | + | chr5.3:14078649-14078668 | MS.gene64887:intron | 30.0% | |
| GAAATGAGTCGAATTCATTA+TGG | - | chr5.3:14079092-14079111 | None:intergenic | 30.0% | |
| GAAGAAACAGAAATACAAAC+AGG | + | chr5.3:14079960-14079979 | MS.gene64887:CDS | 30.0% | |
| GAATAAGTCTTTGTTAAGAG+GGG | + | chr5.3:14081286-14081305 | MS.gene64887:CDS | 30.0% | |
| GAATCTCTACTGATAAATTC+GGG | - | chr5.3:14079807-14079826 | None:intergenic | 30.0% | |
| GATCAATATATTGGAAAGAG+AGG | + | chr5.3:14081682-14081701 | MS.gene64887:CDS | 30.0% | |
| GGAATAAGTCTTTGTTAAGA+GGG | + | chr5.3:14081285-14081304 | MS.gene64887:CDS | 30.0% | |
| TAAAAACAATCAAGCAAAGG+AGG | - | chr5.3:14078195-14078214 | None:intergenic | 30.0% | |
| TAATACCAGAACAAGAACTA+TGG | - | chr5.3:14078730-14078749 | None:intergenic | 30.0% | |
| TCATGATTGAATATGCAATC+AGG | - | chr5.3:14079480-14079499 | None:intergenic | 30.0% | |
| TCCATTCATGTTATGATGAA+AGG | + | chr5.3:14078058-14078077 | MS.gene64887:intron | 30.0% | |
| TGGAATAAGTCTTTGTTAAG+AGG | + | chr5.3:14081284-14081303 | MS.gene64887:CDS | 30.0% | |
| TGGTAAGAGAAATCAATCAA+TGG | + | chr5.3:14080271-14080290 | MS.gene64887:CDS | 30.0% | |
| ! | GAAACTGTCATTTATAGAGA+TGG | - | chr5.3:14078648-14078667 | None:intergenic | 30.0% |
| ! | GAAATATGATGGTACTTTTC+TGG | - | chr5.3:14078444-14078463 | None:intergenic | 30.0% |
| ! | TATAGAAGATTTTCTTGAGG+AGG | + | chr5.3:14079545-14079564 | MS.gene64887:CDS | 30.0% |
| ! | TTTGAAATGTGCAGATGAAT+GGG | + | chr5.3:14079926-14079945 | MS.gene64887:CDS | 30.0% |
| ! | TTTTCAAACAAGGGAACAAA+TGG | + | chr5.3:14079021-14079040 | MS.gene64887:CDS | 30.0% |
| ! | TTTTCTGCTATATGCTCTTT+AGG | + | chr5.3:14080746-14080765 | MS.gene64887:intron | 30.0% |
| ! | TTTTTGAATTCAATCAAGGG+AGG | + | chr5.3:14077951-14077970 | MS.gene64887:CDS | 30.0% |
| !!! | AGTTTTGATTCAAGAAAAGC+TGG | + | chr5.3:14080982-14081001 | MS.gene64887:intron | 30.0% |
| !!! | TTTTGAAATGTGCAGATGAA+TGG | + | chr5.3:14079925-14079944 | MS.gene64887:CDS | 30.0% |
| AGAGAATCGAAACAACGAAA+AGG | + | chr5.3:14079302-14079321 | MS.gene64887:CDS | 35.0% | |
| AGGAACTGTTGAAGTTAGTA+TGG | + | chr5.3:14081546-14081565 | MS.gene64887:CDS | 35.0% | |
| ATATTGAGAAAGATCCCTCA+AGG | + | chr5.3:14078560-14078579 | MS.gene64887:intron | 35.0% | |
| ATTGTGGAGGGATAAATAGA+TGG | + | chr5.3:14080527-14080546 | MS.gene64887:intron | 35.0% | |
| ATTTGACGAGCAATAAGCTT+AGG | - | chr5.3:14079675-14079694 | None:intergenic | 35.0% | |
| ATTTGGAAAGCTTCTACTAG+AGG | + | chr5.3:14080091-14080110 | MS.gene64887:CDS | 35.0% | |
| CAATCAATGGTAGAATCACA+TGG | + | chr5.3:14080284-14080303 | MS.gene64887:CDS | 35.0% | |
| CCGCAATAAAAAGGAATGAA+CGG | + | chr5.3:14080652-14080671 | MS.gene64887:intron | 35.0% | |
| GAATCAACAAGATCATACGA+AGG | + | chr5.3:14079753-14079772 | MS.gene64887:CDS | 35.0% | |
| GAATCACTTTCAGTTGTTCT+TGG | + | chr5.3:14081452-14081471 | MS.gene64887:CDS | 35.0% | |
| GATACATATGCAAAGCCTAT+TGG | + | chr5.3:14081308-14081327 | MS.gene64887:CDS | 35.0% | |
| GGAACTGTTGAAGTTAGTAT+GGG | + | chr5.3:14081547-14081566 | MS.gene64887:CDS | 35.0% | |
| GTCATTGTTACCAAGAACAA+GGG | - | chr5.3:14078507-14078526 | None:intergenic | 35.0% | |
| GTGAAGGATATAACGAAACA+CGG | - | chr5.3:14081580-14081599 | None:intergenic | 35.0% | |
| GTGACAACCGAAGAAAATAA+GGG | - | chr5.3:14078135-14078154 | None:intergenic | 35.0% | |
| GTTGAAACATCTCAGAAGTA+CGG | + | chr5.3:14078288-14078307 | MS.gene64887:CDS | 35.0% | |
| TCAAGATCAGGAACATCATT+TGG | + | chr5.3:14080074-14080093 | MS.gene64887:CDS | 35.0% | |
| TCATTGTTACCAAGAACAAG+GGG | - | chr5.3:14078506-14078525 | None:intergenic | 35.0% | |
| TCTCTTATGTAAGATTCTGC+TGG | - | chr5.3:14081230-14081249 | None:intergenic | 35.0% | |
| TCTTCTATACTATGTCTACC+TGG | - | chr5.3:14079534-14079553 | None:intergenic | 35.0% | |
| TCTTGTTGAAGAACTCACAA+AGG | + | chr5.3:14081727-14081746 | MS.gene64887:CDS | 35.0% | |
| TGACAACCGAAGAAAATAAG+GGG | - | chr5.3:14078134-14078153 | None:intergenic | 35.0% | |
| TGCATATCTTGCTGAAATTC+AGG | + | chr5.3:14078103-14078122 | MS.gene64887:intron | 35.0% | |
| TGTGACAACCGAAGAAAATA+AGG | - | chr5.3:14078136-14078155 | None:intergenic | 35.0% | |
| TGTTCAAAGTTTGCCGAAAT+CGG | + | chr5.3:14079252-14079271 | MS.gene64887:CDS | 35.0% | |
| TGTTTCGTTATATCCTTCAC+CGG | + | chr5.3:14081580-14081599 | MS.gene64887:CDS | 35.0% | |
| TTCTTATATCCCCTTGTTCT+TGG | + | chr5.3:14078494-14078513 | MS.gene64887:intron | 35.0% | |
| ! | AACATTTGAGTTCAATCCCT+TGG | + | chr5.3:14081639-14081658 | MS.gene64887:CDS | 35.0% |
| ! | AGAGATTTACTTGTTGCTTC+TGG | + | chr5.3:14081245-14081264 | MS.gene64887:CDS | 35.0% |
| ! | CATTGATTATTCCAGACCAA+GGG | - | chr5.3:14081658-14081677 | None:intergenic | 35.0% |
| ! | CCGTTCATTCCTTTTTATTG+CGG | - | chr5.3:14080655-14080674 | None:intergenic | 35.0% |
| ! | GGGAAGAAGTTTTCAAACAA+GGG | + | chr5.3:14079012-14079031 | MS.gene64887:CDS | 35.0% |
| ! | TATGATGTCTTTTGTGAGCA+TGG | - | chr5.3:14077991-14078010 | None:intergenic | 35.0% |
| ! | TCATTGATTATTCCAGACCA+AGG | - | chr5.3:14081659-14081678 | None:intergenic | 35.0% |
| !! | AGAATTGGACTAGTTCAACA+GGG | + | chr5.3:14079502-14079521 | MS.gene64887:CDS | 35.0% |
| !! | AGATACAGTTTTGCTCTAAG+AGG | + | chr5.3:14080239-14080258 | MS.gene64887:CDS | 35.0% |
| !! | CTGGTTTATACTTTGGTTCT+TGG | + | chr5.3:14081264-14081283 | MS.gene64887:CDS | 35.0% |
| !! | GTTGCTTCTGGTTTATACTT+TGG | + | chr5.3:14081257-14081276 | MS.gene64887:CDS | 35.0% |
| !! | TTGTTGATTTGGTAGAGCTA+AGG | + | chr5.3:14081114-14081133 | MS.gene64887:intron | 35.0% |
| !!! | GATACAGTTTTGCTCTAAGA+GGG | + | chr5.3:14080240-14080259 | MS.gene64887:CDS | 35.0% |
| !!! | GTTTTCCCCCTTATTTTCTT+CGG | + | chr5.3:14078125-14078144 | MS.gene64887:intron | 35.0% |
| AACTGTCGGAAAAGGTTATG+CGG | + | chr5.3:14079602-14079621 | MS.gene64887:CDS | 40.0% | |
| AAGGATCTTACAAGGTTCCT+TGG | - | chr5.3:14080041-14080060 | None:intergenic | 40.0% | |
| AATAATCGTTATTCAGGCGC+TGG | + | chr5.3:14078835-14078854 | MS.gene64887:CDS | 40.0% | |
| AATCTAGACAGTGTCAAAGG+TGG | - | chr5.3:14081479-14081498 | None:intergenic | 40.0% | |
| ACAAGATCATACGAAGGTGA+AGG | + | chr5.3:14079759-14079778 | MS.gene64887:CDS | 40.0% | |
| ACAATGAGAGACATCACAAG+TGG | + | chr5.3:14080323-14080342 | MS.gene64887:CDS | 40.0% | |
| ACTTGATTCTAGTGATGTCG+AGG | + | chr5.3:14081151-14081170 | MS.gene64887:CDS | 40.0% | |
| AGGTTTCAAGATAACGATCC+GGG | - | chr5.3:14079454-14079473 | None:intergenic | 40.0% | |
| ATATAAGAAGTCCTTCAGGG+GGG | - | chr5.3:14078483-14078502 | None:intergenic | 40.0% | |
| ATATCAAGCAGCAAGGTTTC+AGG | + | chr5.3:14079227-14079246 | MS.gene64887:CDS | 40.0% | |
| ATGGAAGGAGTTCAGTTAGT+TGG | + | chr5.3:14079040-14079059 | MS.gene64887:CDS | 40.0% | |
| CAAACAAGGGAACAAATGGA+AGG | + | chr5.3:14079025-14079044 | MS.gene64887:CDS | 40.0% | |
| CAAGGAAAAACTGTCGGAAA+AGG | + | chr5.3:14079594-14079613 | MS.gene64887:CDS | 40.0% | |
| CAGGTTTCAAGATAACGATC+CGG | - | chr5.3:14079455-14079474 | None:intergenic | 40.0% | |
| CCAACAGTTCTTATGAACGA+CGG | + | chr5.3:14080347-14080366 | MS.gene64887:CDS | 40.0% | |
| CTGAATCTAGACAGTGTCAA+AGG | - | chr5.3:14081482-14081501 | None:intergenic | 40.0% | |
| CTTACAGGTAATTCTCCTTC+TGG | - | chr5.3:14078315-14078334 | None:intergenic | 40.0% | |
| CTTAGAGTTCTGCTCTTTGA+AGG | - | chr5.3:14079369-14079388 | None:intergenic | 40.0% | |
| CTTGTGATGTCTCTCATTGT+CGG | - | chr5.3:14080323-14080342 | None:intergenic | 40.0% | |
| GAACTGCAAGGAAAAACTGT+CGG | + | chr5.3:14079588-14079607 | MS.gene64887:CDS | 40.0% | |
| GAATTCTTCTGCAGAAGTGA+GGG | - | chr5.3:14080427-14080446 | None:intergenic | 40.0% | |
| GACAACCGAAGAAAATAAGG+GGG | - | chr5.3:14078133-14078152 | None:intergenic | 40.0% | |
| GATATAAGAAGTCCTTCAGG+GGG | - | chr5.3:14078484-14078503 | None:intergenic | 40.0% | |
| GATGTTCCTGATCTTGATAC+AGG | - | chr5.3:14080071-14080090 | None:intergenic | 40.0% | |
| GCAATAAGCTTAGGATCAGA+TGG | - | chr5.3:14079666-14079685 | None:intergenic | 40.0% | |
| GCTCACAAAAGACATCATAG+TGG | + | chr5.3:14077992-14078011 | MS.gene64887:CDS | 40.0% | |
| GGATATAAGAAGTCCTTCAG+GGG | - | chr5.3:14078485-14078504 | None:intergenic | 40.0% | |
| GGGATATAAGAAGTCCTTCA+GGG | - | chr5.3:14078486-14078505 | None:intergenic | 40.0% | |
| GGTCAATGATTGTTTCAGCT+AGG | - | chr5.3:14078423-14078442 | None:intergenic | 40.0% | |
| GGTCATTGTTACCAAGAACA+AGG | - | chr5.3:14078508-14078527 | None:intergenic | 40.0% | |
| GGTTGAAACGGAATGAGTAA+TGG | - | chr5.3:14080406-14080425 | None:intergenic | 40.0% | |
| GTGTCTCAATATCACTTCCT+CGG | - | chr5.3:14079629-14079648 | None:intergenic | 40.0% | |
| TAAAGAGACATATCCGGTGA+AGG | - | chr5.3:14081596-14081615 | None:intergenic | 40.0% | |
| TATCCAATCGATCAAGCACA+TGG | + | chr5.3:14078887-14078906 | MS.gene64887:CDS | 40.0% | |
| TGAAACGGAATGAGTAATGG+AGG | - | chr5.3:14080403-14080422 | None:intergenic | 40.0% | |
| TGAATTCAATCAAGGGAGGA+TGG | + | chr5.3:14077955-14077974 | MS.gene64887:CDS | 40.0% | |
| TGAGCAGACTGAATTTGAGT+TGG | - | chr5.3:14079733-14079752 | None:intergenic | 40.0% | |
| TGGAAGGAGTTCAGTTAGTT+GGG | + | chr5.3:14079041-14079060 | MS.gene64887:CDS | 40.0% | |
| TTCAACAGTTCCTTTCCTTG+AGG | - | chr5.3:14081539-14081558 | None:intergenic | 40.0% | |
| TTGAAGCATATCAAGCAGCA+AGG | + | chr5.3:14079220-14079239 | MS.gene64887:CDS | 40.0% | |
| TTGAATATGCAATCAGGACC+AGG | - | chr5.3:14079474-14079493 | None:intergenic | 40.0% | |
| TTTGTGAGCATGGACTTTCT+TGG | - | chr5.3:14077981-14078000 | None:intergenic | 40.0% | |
| ! | CTGATGTCTCTGAAAACTTG+TGG | - | chr5.3:14080903-14080922 | None:intergenic | 40.0% |
| ! | CTTTTATCTGATGGAGCAAC+AGG | - | chr5.3:14078976-14078995 | None:intergenic | 40.0% |
| ! | GAAACGGAATGAGTAATGGA+GGG | - | chr5.3:14080402-14080421 | None:intergenic | 40.0% |
| ! | GCAGTGTTCATGAAGACTTT+TGG | + | chr5.3:14080811-14080830 | MS.gene64887:CDS | 40.0% |
| ! | GGGGAAGAAGTTTTCAAACA+AGG | + | chr5.3:14079011-14079030 | MS.gene64887:CDS | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | + | chr5.3:14080814-14080833 | MS.gene64887:CDS | 40.0% |
| ! | TCTTTAGGAGAACTACACTG+AGG | + | chr5.3:14080761-14080780 | MS.gene64887:intron | 40.0% |
| !! | GACAAATCAGGAGTTGATAC+TGG | - | chr5.3:14080858-14080877 | None:intergenic | 40.0% |
| !! | GAGAATTGGACTAGTTCAAC+AGG | + | chr5.3:14079501-14079520 | MS.gene64887:CDS | 40.0% |
| !! | TTCTGAAGTTCCATTTCCTG+TGG | - | chr5.3:14079186-14079205 | None:intergenic | 40.0% |
| AACAGTTCCTTTCCTTGAGG+CGG | - | chr5.3:14081536-14081555 | None:intergenic | 45.0% | |
| ACAATCAAGCAAAGGAGGGA+AGG | - | chr5.3:14078190-14078209 | None:intergenic | 45.0% | |
| ACAGAGAGTTGTTGTCTCCA+AGG | + | chr5.3:14080021-14080040 | MS.gene64887:CDS | 45.0% | |
| ACAGTTCTTATGAACGACGG+TGG | + | chr5.3:14080350-14080369 | MS.gene64887:CDS | 45.0% | |
| AGAAAGATCCCTCAAGGTTG+TGG | + | chr5.3:14078566-14078585 | MS.gene64887:intron | 45.0% | |
| AGTTCAACAGGGACTTTACC+AGG | + | chr5.3:14079513-14079532 | MS.gene64887:CDS | 45.0% | |
| ATTCAGACTCAGACGGTTTC+TGG | - | chr5.3:14081190-14081209 | None:intergenic | 45.0% | |
| CAATCAAGCAAAGGAGGGAA+GGG | - | chr5.3:14078189-14078208 | None:intergenic | 45.0% | |
| CCGTCGTTCATAAGAACTGT+TGG | - | chr5.3:14080350-14080369 | None:intergenic | 45.0% | |
| CGAATTCTTCTGCAGAAGTG+AGG | - | chr5.3:14080428-14080447 | None:intergenic | 45.0% | |
| CGGATCGTTATCTTGAAACC+TGG | + | chr5.3:14079453-14079472 | MS.gene64887:CDS | 45.0% | |
| CTGATAAATTCGGGGACACT+TGG | - | chr5.3:14079798-14079817 | None:intergenic | 45.0% | |
| GAAACCGTCTGAGTCTGAAT+TGG | + | chr5.3:14081190-14081209 | MS.gene64887:CDS | 45.0% | |
| GAAAGATCCCTCAAGGTTGT+GGG | + | chr5.3:14078567-14078586 | MS.gene64887:intron | 45.0% | |
| GAAAGCTTCTACTAGAGGAC+CGG | + | chr5.3:14080096-14080115 | MS.gene64887:CDS | 45.0% | |
| GAGCAGACAAGGATCTTACA+AGG | - | chr5.3:14080049-14080068 | None:intergenic | 45.0% | |
| GATGAGTTTCAAAGTCTGCG+TGG | - | chr5.3:14078248-14078267 | None:intergenic | 45.0% | |
| GCAACAGGTTTAGTGTCTAC+AGG | - | chr5.3:14078961-14078980 | None:intergenic | 45.0% | |
| GCCTTTGTTCTCCAAAACTC+TGG | - | chr5.3:14079152-14079171 | None:intergenic | 45.0% | |
| GGAGAGTAGAGCACATGTAT+AGG | + | chr5.3:14078588-14078607 | MS.gene64887:intron | 45.0% | |
| GGGGATATAAGAAGTCCTTC+AGG | - | chr5.3:14078487-14078506 | None:intergenic | 45.0% | |
| GTAGAGCACATGTATAGGCT+TGG | + | chr5.3:14078593-14078612 | MS.gene64887:intron | 45.0% | |
| TAGATGCATCTTCTCCAACC+CGG | + | chr5.3:14079433-14079452 | MS.gene64887:CDS | 45.0% | |
| TATAAGAAGTCCTTCAGGGG+GGG | - | chr5.3:14078482-14078501 | None:intergenic | 45.0% | |
| TCGTCTCTTGAGGACAAATC+AGG | - | chr5.3:14080870-14080889 | None:intergenic | 45.0% | |
| TCTGCTCCTGTATCAAGATC+AGG | + | chr5.3:14080062-14080081 | MS.gene64887:CDS | 45.0% | |
| TCTTGATACAGGAGCAGACA+AGG | - | chr5.3:14080060-14080079 | None:intergenic | 45.0% | |
| TGATGTCTCTCATTGTCGGA+CGG | - | chr5.3:14080319-14080338 | None:intergenic | 45.0% | |
| TGCACCAATTCAGACTCAGA+CGG | - | chr5.3:14081197-14081216 | None:intergenic | 45.0% | |
| TGCAGAAGTGAGGGTTGAAA+CGG | - | chr5.3:14080418-14080437 | None:intergenic | 45.0% | |
| TTCAAGATAACGATCCGGGT+TGG | - | chr5.3:14079450-14079469 | None:intergenic | 45.0% | |
| TTCAGCTAGGATTCGAACTC+AGG | - | chr5.3:14078410-14078429 | None:intergenic | 45.0% | |
| TTGAGTTCAATCCCTTGGTC+TGG | + | chr5.3:14081644-14081663 | MS.gene64887:CDS | 45.0% | |
| TTGGAGACAACAACTCTCTG+TGG | - | chr5.3:14080022-14080041 | None:intergenic | 45.0% | |
| ! | AAAGATGACGGCGATGATGA+TGG | + | chr5.3:14079120-14079139 | MS.gene64887:CDS | 45.0% |
| ! | CACATGTATAGGCTTGGTCT+TGG | + | chr5.3:14078599-14078618 | MS.gene64887:intron | 45.0% |
| ! | CGTTTGAAATGCGAACTGCA+AGG | + | chr5.3:14079576-14079595 | MS.gene64887:CDS | 45.0% |
| ! | GACATCAGCTCTGGTTTAAC+TGG | + | chr5.3:14080915-14080934 | MS.gene64887:CDS | 45.0% |
| ! | GTTTTCAGAGACATCAGCTC+TGG | + | chr5.3:14080906-14080925 | MS.gene64887:CDS | 45.0% |
| ! | TTTTAACCGGGGCTCATATC+CGG | + | chr5.3:14080123-14080142 | MS.gene64887:CDS | 45.0% |
| !! | GCTAGAAACACTGCCGATTT+CGG | - | chr5.3:14079268-14079287 | None:intergenic | 45.0% |
| !!! | ACAGTTTTGCTCTAAGAGGG+AGG | + | chr5.3:14080243-14080262 | MS.gene64887:CDS | 45.0% |
| !!! | GCCAGAGTTTTGGAGAACAA+AGG | + | chr5.3:14079148-14079167 | MS.gene64887:CDS | 45.0% |
| !!! | GCTCTAAGAGGGAGGATTTT+TGG | + | chr5.3:14080251-14080270 | MS.gene64887:CDS | 45.0% |
| !!! | GTTTTGGAGAACAAAGGCGT+CGG | + | chr5.3:14079154-14079173 | MS.gene64887:CDS | 45.0% |
| !!! | TTTTGGAGAACAAAGGCGTC+GGG | + | chr5.3:14079155-14079174 | MS.gene64887:CDS | 45.0% |
| ATAAGAAGTCCTTCAGGGGG+GGG | - | chr5.3:14078481-14078500 | None:intergenic | 50.0% | |
| CTACTCTCCCACAACCTTGA+GGG | - | chr5.3:14078577-14078596 | None:intergenic | 50.0% | |
| CTGCCATGTGCTTGATCGAT+TGG | - | chr5.3:14078893-14078912 | None:intergenic | 50.0% | |
| TATCCGGAGGAAGCTTGAAG+CGG | + | chr5.3:14080139-14080158 | MS.gene64887:CDS | 50.0% | |
| TCGGGAACATCCACAGGAAA+TGG | + | chr5.3:14079173-14079192 | MS.gene64887:CDS | 50.0% | |
| TCTACTCTCCCACAACCTTG+AGG | - | chr5.3:14078578-14078597 | None:intergenic | 50.0% | |
| ! | GATGGATGGAGCCAGAGTTT+TGG | + | chr5.3:14079138-14079157 | MS.gene64887:CDS | 50.0% |
| ! | TCTCAGAAGTACGGTCCAGA+AGG | + | chr5.3:14078297-14078316 | MS.gene64887:CDS | 50.0% |
| !! | AGGACCGGCACATTTTAACC+GGG | + | chr5.3:14080111-14080130 | MS.gene64887:CDS | 50.0% |
| !! | ATGACGGCGATGATGATGGA+TGG | + | chr5.3:14079124-14079143 | MS.gene64887:CDS | 50.0% |
| !! | GAGGACCGGCACATTTTAAC+CGG | + | chr5.3:14080110-14080129 | MS.gene64887:CDS | 50.0% |
| ACACTGCTGCACACAGATGC+AGG | - | chr5.3:14080798-14080817 | None:intergenic | 55.0% | |
| AGCAAAGGAGGGAAGGGAAC+AGG | - | chr5.3:14078183-14078202 | None:intergenic | 55.0% | |
| ATCAACCTCGCCACAAGGCT+TGG | - | chr5.3:14078922-14078941 | None:intergenic | 55.0% | |
| CAACCGCTTCAAGCTTCCTC+CGG | - | chr5.3:14080145-14080164 | None:intergenic | 55.0% | |
| CACAGCAGTCTCGTCTCTTG+AGG | - | chr5.3:14080880-14080899 | None:intergenic | 55.0% | |
| CTGCACACAGATGCAGGACT+CGG | - | chr5.3:14080792-14080811 | None:intergenic | 55.0% | |
| GAGCCCCGGTTAAAATGTGC+CGG | - | chr5.3:14080118-14080137 | None:intergenic | 55.0% | |
| GCAAAGGAGGGAAGGGAACA+GGG | - | chr5.3:14078182-14078201 | None:intergenic | 55.0% | |
| GGAAAAGGTTATGCGGTCCG+AGG | + | chr5.3:14079609-14079628 | MS.gene64887:CDS | 55.0% | |
| TAAGAAGTCCTTCAGGGGGG+GGG | - | chr5.3:14078480-14078499 | None:intergenic | 55.0% | |
| ! | AAGCCTTGTGGCGAGGTTGA+TGG | + | chr5.3:14078921-14078940 | MS.gene64887:CDS | 55.0% |
| ! | AGCCTTGTGGCGAGGTTGAT+GGG | + | chr5.3:14078922-14078941 | MS.gene64887:CDS | 55.0% |
| !! | GGACCGGCACATTTTAACCG+GGG | + | chr5.3:14080112-14080131 | MS.gene64887:CDS | 55.0% |
| AAGAAGTCCTTCAGGGGGGG+GGG | - | chr5.3:14078479-14078498 | None:intergenic | 60.0% | |
| ACCCCATCAACCTCGCCACA+AGG | - | chr5.3:14078927-14078946 | None:intergenic | 60.0% | |
| CACACAGATGCAGGACTCGG+AGG | - | chr5.3:14080789-14080808 | None:intergenic | 60.0% | |
| CTTCCTCCGGATATGAGCCC+CGG | - | chr5.3:14080132-14080151 | None:intergenic | 60.0% | |
| GCAGACTGCACCAAGCCTTG+TGG | + | chr5.3:14078909-14078928 | MS.gene64887:CDS | 60.0% | |
| GTTGTCGCCGCCTCAAGGAA+AGG | + | chr5.3:14081526-14081545 | MS.gene64887:CDS | 60.0% | |
| TAACCGGGGCTCATATCCGG+AGG | + | chr5.3:14080126-14080145 | MS.gene64887:CDS | 60.0% | |
| TCAGGGGGGGGGGTAAAAGA+AGG | - | chr5.3:14078469-14078488 | None:intergenic | 60.0% | |
| TCCATGTTGTCGCCGCCTCA+AGG | + | chr5.3:14081521-14081540 | MS.gene64887:CDS | 60.0% | |
| TCCTTGAGGCGGCGACAACA+TGG | - | chr5.3:14081525-14081544 | None:intergenic | 60.0% | |
| ! | TCTTTTACCCCCCCCCCTGA+AGG | + | chr5.3:14078469-14078488 | MS.gene64887:intron | 60.0% |
| !! | AAGGCGTCGGGAACATCCAC+AGG | + | chr5.3:14079167-14079186 | MS.gene64887:CDS | 60.0% |
| !! | GCCTTGTGGCGAGGTTGATG+GGG | + | chr5.3:14078923-14078942 | MS.gene64887:CDS | 60.0% |
| GGGGGGGGGGTAAAAGAAGG+AGG | - | chr5.3:14078466-14078485 | None:intergenic | 65.0% | |
| ! | CTGCACCAAGCCTTGTGGCG+AGG | + | chr5.3:14078914-14078933 | MS.gene64887:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 14077932 | 14081760 | 14077932 | ID=MS.gene64887 |
| chr5.3 | mRNA | 14077932 | 14081760 | 14077932 | ID=MS.gene64887.t1;Parent=MS.gene64887 |
| chr5.3 | exon | 14077932 | 14078013 | 14077932 | ID=MS.gene64887.t1.exon1;Parent=MS.gene64887.t1 |
| chr5.3 | CDS | 14077932 | 14078013 | 14077932 | ID=cds.MS.gene64887.t1;Parent=MS.gene64887.t1 |
| chr5.3 | exon | 14078253 | 14078329 | 14078253 | ID=MS.gene64887.t1.exon2;Parent=MS.gene64887.t1 |
| chr5.3 | CDS | 14078253 | 14078329 | 14078253 | ID=cds.MS.gene64887.t1;Parent=MS.gene64887.t1 |
| chr5.3 | exon | 14078802 | 14080382 | 14078802 | ID=MS.gene64887.t1.exon3;Parent=MS.gene64887.t1 |
| chr5.3 | CDS | 14078802 | 14080382 | 14078802 | ID=cds.MS.gene64887.t1;Parent=MS.gene64887.t1 |
| chr5.3 | exon | 14080768 | 14080936 | 14080768 | ID=MS.gene64887.t1.exon4;Parent=MS.gene64887.t1 |
| chr5.3 | CDS | 14080768 | 14080936 | 14080768 | ID=cds.MS.gene64887.t1;Parent=MS.gene64887.t1 |
| chr5.3 | exon | 14081129 | 14081760 | 14081129 | ID=MS.gene64887.t1.exon5;Parent=MS.gene64887.t1 |
| chr5.3 | CDS | 14081129 | 14081760 | 14081129 | ID=cds.MS.gene64887.t1;Parent=MS.gene64887.t1 |
| Gene Sequence |
| Protein sequence |
