AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054489


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054489.t1 MTR_0184s0040 90.234 471 46 0 1 471 16 486 0.0 874
MS.gene054489.t1 MTR_0078s0190 90.234 471 46 0 1 471 16 486 0.0 874
MS.gene054489.t1 MTR_0078s0010 85.106 470 69 1 1 469 1 470 0.0 814
MS.gene054489.t1 MTR_7g047030 83.227 471 78 1 1 470 1 471 0.0 793
MS.gene054489.t1 MTR_7g047270 83.227 471 78 1 1 470 1 471 0.0 793
MS.gene054489.t1 MTR_0078s0060 82.590 471 80 2 1 470 1 470 0.0 773
MS.gene054489.t1 MTR_8g009067 56.930 469 201 1 1 469 1 468 0.0 540
MS.gene054489.t1 MTR_8g008970 55.650 469 207 1 1 469 1 468 0.0 536
MS.gene054489.t1 MTR_8g008970 50.355 282 122 3 188 468 527 791 4.25e-82 270
MS.gene054489.t1 MTR_8g009073 55.319 470 205 2 1 468 1 467 0.0 530
MS.gene054489.t1 MTR_8g009050 55.532 470 206 3 1 468 1 469 0.0 525
MS.gene054489.t1 MTR_0184s0030 54.008 474 210 4 1 469 1 471 0.0 524
MS.gene054489.t1 MTR_1g019510 55.202 471 203 3 1 468 1 466 0.0 520
MS.gene054489.t1 MTR_8g009055 54.043 470 213 3 1 468 1 469 4.68e-180 512
MS.gene054489.t1 MTR_8g008990 54.237 472 211 4 1 468 1 471 6.03e-179 509
MS.gene054489.t1 MTR_8g009063 54.352 471 210 3 1 468 8 476 9.28e-177 504
MS.gene054489.t1 MTR_6g005600 50.630 476 223 5 1 469 1 471 1.69e-162 468
MS.gene054489.t1 MTR_7g046490 52.878 469 211 4 1 465 1 463 6.29e-159 458
MS.gene054489.t1 MTR_8g006260 48.745 478 231 6 1 469 1 473 4.72e-158 457
MS.gene054489.t1 MTR_8g006270 50.734 477 219 9 1 470 1 468 7.26e-156 451
MS.gene054489.t1 MTR_7g117170 46.895 467 237 4 7 467 16 477 1.02e-154 448
MS.gene054489.t1 MTR_6g023665 47.881 472 237 7 1 468 8 474 2.77e-148 432
MS.gene054489.t1 MTR_8g077590 47.974 469 232 7 4 467 7 468 6.96e-145 423
MS.gene054489.t1 MTR_8g012745 48.211 475 235 7 1 468 1 471 4.10e-144 421
MS.gene054489.t1 MTR_8g012635 47.170 477 240 6 1 468 1 474 4.63e-143 418
MS.gene054489.t1 MTR_6g488280 46.596 470 242 7 1 466 1 465 5.14e-143 418
MS.gene054489.t1 MTR_0428s0010 46.596 470 242 7 1 466 1 465 5.14e-143 418
MS.gene054489.t1 MTR_8g027885 45.140 463 243 6 7 466 19 473 3.20e-142 416
MS.gene054489.t1 MTR_8g465670 45.511 479 235 9 3 466 4 471 1.14e-140 412
MS.gene054489.t1 MTR_8g012650 47.158 475 243 5 1 468 1 474 3.18e-140 411
MS.gene054489.t1 MTR_8g006730 46.737 475 240 8 1 468 1 469 1.95e-139 409
MS.gene054489.t1 MTR_8g027870 44.060 463 248 5 7 466 19 473 8.72e-139 407
MS.gene054489.t1 MTR_8g006710 47.046 474 239 7 1 468 1 468 2.06e-138 406
MS.gene054489.t1 MTR_8g009067 55.271 351 156 1 119 469 1 350 1.05e-137 400
MS.gene054489.t1 MTR_8g006220 44.490 490 237 10 1 466 1 479 5.99e-134 395
MS.gene054489.t1 MTR_8g009073 55.882 340 145 2 131 468 2 338 1.18e-132 387
MS.gene054489.t1 MTR_0078s0200 54.952 313 134 3 1 309 1 310 4.55e-115 341
MS.gene054489.t1 MTR_8g074550 42.449 490 247 15 1 462 3 485 7.34e-105 322
MS.gene054489.t1 MTR_5g019580 37.681 483 279 11 1 466 2 479 7.03e-99 306
MS.gene054489.t1 MTR_8g012730 46.970 330 148 3 144 468 4 311 5.42e-98 297
MS.gene054489.t1 MTR_6g033615 37.975 474 253 14 7 466 5 451 2.28e-91 285
MS.gene054489.t1 MTR_6g033625 37.996 479 260 12 7 466 5 465 7.23e-91 284
MS.gene054489.t1 MTR_5g019580 37.060 483 254 13 1 466 54 503 1.89e-88 280
MS.gene054489.t1 MTR_6g033725 36.798 481 260 12 7 466 5 462 2.27e-88 278
MS.gene054489.t1 MTR_6g033675 34.172 477 281 7 7 466 5 465 3.02e-87 275
MS.gene054489.t1 MTR_6g033660 35.699 479 270 10 7 466 5 464 2.34e-86 273
MS.gene054489.t1 MTR_3g009510 33.264 484 296 10 1 465 1 476 1.83e-83 265
MS.gene054489.t1 MTR_1g019520 57.009 214 91 1 256 468 2 215 5.13e-82 253
MS.gene054489.t1 MTR_8g012630 56.019 216 91 1 257 468 203 418 1.16e-78 251
MS.gene054489.t1 MTR_8g012630 47.917 192 94 4 1 187 1 191 3.56e-46 166
MS.gene054489.t1 MTR_5g090630 33.612 479 279 16 3 461 2 461 6.67e-71 233
MS.gene054489.t1 MTR_5g090670 33.539 486 281 17 3 461 2 472 6.89e-71 233
MS.gene054489.t1 MTR_5g090580 33.264 481 287 15 3 461 2 470 3.12e-68 226
MS.gene054489.t1 MTR_5g098930 32.143 476 292 15 3 461 2 463 6.73e-67 222
MS.gene054489.t1 MTR_8g006230 47.414 232 116 3 85 316 32 257 4.80e-66 214
MS.gene054489.t1 MTR_5g090700 31.134 485 294 17 3 461 2 472 1.99e-65 218
MS.gene054489.t1 MTR_6g005660 46.400 250 132 2 1 248 1 250 3.26e-65 211
MS.gene054489.t1 MTR_5g090620 32.432 481 292 15 3 461 2 471 3.72e-64 215
MS.gene054489.t1 MTR_8g009840 57.216 194 77 2 279 468 337 528 3.88e-64 216
MS.gene054489.t1 MTR_5g090660 31.084 489 301 17 3 469 2 476 1.44e-61 210
MS.gene054489.t1 MTR_2g040530 31.857 474 291 17 7 464 6 463 1.53e-60 205
MS.gene054489.t1 MTR_2g046820 32.347 473 290 17 6 464 5 461 2.10e-60 205
MS.gene054489.t1 MTR_5g070090 31.723 476 282 17 3 461 8 457 3.14e-60 204
MS.gene054489.t1 MTR_2g046750 31.546 485 281 19 6 464 5 464 7.92e-60 203
MS.gene054489.t1 MTR_5g070040 31.590 478 289 15 1 461 6 462 1.78e-59 202
MS.gene054489.t1 MTR_5g090610 31.315 479 285 17 3 461 2 456 2.99e-59 202
MS.gene054489.t1 MTR_5g090600 31.733 479 276 15 3 461 2 449 4.13e-59 201
MS.gene054489.t1 MTR_8g066610 30.738 488 289 13 6 464 9 476 5.28e-58 199
MS.gene054489.t1 MTR_2g098430 32.794 494 284 18 1 463 1 477 8.78e-55 191
MS.gene054489.t1 MTR_5g464760 31.161 491 276 18 6 461 12 475 3.25e-54 189
MS.gene054489.t1 MTR_3g069710 30.000 470 297 11 1 464 7 450 3.74e-53 185
MS.gene054489.t1 MTR_0184s0010 79.798 99 20 0 372 470 1 99 1.56e-52 172
MS.gene054489.t1 MTR_5g035580 29.132 484 284 12 4 467 11 455 1.78e-52 184
MS.gene054489.t1 MTR_3g008010 27.968 497 290 12 6 464 10 476 2.62e-52 184
MS.gene054489.t1 MTR_6g038230 30.165 484 270 14 6 463 11 452 3.48e-52 182
MS.gene054489.t1 MTR_4g485630 30.353 481 290 13 6 461 9 469 3.62e-52 183
MS.gene054489.t1 MTR_6g038240 29.645 479 281 14 6 464 11 453 7.65e-52 182
MS.gene054489.t1 MTR_4g094220 28.687 495 289 16 6 462 7 475 1.47e-51 182
MS.gene054489.t1 MTR_1g029540 29.501 461 277 14 11 454 19 448 1.37e-50 179
MS.gene054489.t1 MTR_8g090095 31.436 404 238 9 59 454 96 468 3.29e-50 178
MS.gene054489.t1 MTR_6g014290 27.968 497 290 14 3 461 7 473 3.64e-50 178
MS.gene054489.t1 MTR_5g087620 38.662 269 141 7 206 458 226 486 4.91e-50 178
MS.gene054489.t1 MTR_3g479490 28.800 500 292 17 1 464 1 472 5.69e-50 177
MS.gene054489.t1 MTR_7g080935 29.072 485 294 12 1 469 6 456 8.43e-50 176
MS.gene054489.t1 MTR_7g102550 32.231 484 275 16 6 454 9 474 1.10e-49 177
MS.gene054489.t1 MTR_7g080940 29.263 475 276 14 1 454 6 441 1.57e-49 176
MS.gene054489.t1 MTR_6g014250 27.600 500 294 14 3 464 7 476 1.62e-49 176
MS.gene054489.t1 MTR_3g079480 28.858 499 283 17 6 464 21 487 1.64e-49 176
MS.gene054489.t1 MTR_7g070660 30.754 491 279 19 6 461 11 475 1.80e-49 176
MS.gene054489.t1 MTR_6g038200 28.807 486 278 14 4 463 9 452 2.80e-49 175
MS.gene054489.t1 MTR_4g095008 33.121 314 188 8 161 464 162 463 3.24e-49 177
MS.gene054489.t1 MTR_5g464810 30.847 496 271 20 5 461 11 473 3.34e-49 175
MS.gene054489.t1 MTR_5g064240 30.847 496 271 20 5 461 11 473 3.34e-49 175
MS.gene054489.t1 MTR_6g014220 27.600 500 294 14 3 464 7 476 3.62e-49 175
MS.gene054489.t1 MTR_7g071040 29.860 499 284 17 6 464 17 489 4.04e-49 176
MS.gene054489.t1 MTR_0036s0220 29.518 498 273 19 6 461 12 473 1.86e-48 173
MS.gene054489.t1 MTR_4g008630 35.125 279 174 3 178 454 178 451 2.71e-48 172
MS.gene054489.t1 MTR_5g035560 28.016 489 283 12 4 467 9 453 2.76e-48 173
MS.gene054489.t1 MTR_3g479520 28.024 496 291 15 6 464 15 481 1.02e-47 171
MS.gene054489.t1 MTR_3g479610 33.010 309 176 8 169 464 21 311 1.34e-47 167
MS.gene054489.t1 MTR_7g070940 38.951 267 132 7 207 458 215 465 1.68e-47 171
MS.gene054489.t1 MTR_3g009490 44.681 188 100 4 284 467 3 190 1.78e-47 162
MS.gene054489.t1 MTR_6g014050 33.333 297 168 7 179 464 202 479 2.67e-47 170
MS.gene054489.t1 MTR_6g038220 28.571 483 278 12 6 463 11 451 3.76e-47 169
MS.gene054489.t1 MTR_7g117405 30.346 491 267 17 6 454 12 469 1.42e-46 168
MS.gene054489.t1 MTR_2g008210 28.659 492 299 13 2 464 7 475 2.02e-46 168
MS.gene054489.t1 MTR_6g038300 28.274 481 286 14 6 464 11 454 2.31e-46 167
MS.gene054489.t1 MTR_7g070800 29.134 508 282 19 1 464 1 474 2.37e-46 168
MS.gene054489.t1 MTR_6g014020 28.287 502 290 16 3 464 7 478 2.98e-46 167
MS.gene054489.t1 MTR_0288s0020 27.419 496 283 17 3 464 7 459 3.14e-46 167
MS.gene054489.t1 MTR_7g013200 29.149 470 267 16 6 454 5 429 3.76e-46 166
MS.gene054489.t1 MTR_0009s0240 27.992 493 291 17 5 469 6 462 3.87e-46 167
MS.gene054489.t1 MTR_4g128690 28.755 466 290 12 6 461 15 448 8.10e-46 166
MS.gene054489.t1 MTR_7g102490 30.181 497 281 15 5 459 8 480 1.05e-45 166
MS.gene054489.t1 MTR_4g031800 29.191 507 269 18 2 461 5 468 1.14e-45 166
MS.gene054489.t1 MTR_4g485640 37.729 273 141 7 207 461 401 662 1.37e-45 169
MS.gene054489.t1 MTR_4g094920 30.659 349 207 8 125 464 156 478 2.15e-45 165
MS.gene054489.t1 MTR_0891s0010 32.770 296 168 7 179 461 8 285 2.27e-45 160
MS.gene054489.t1 MTR_7g011470 27.614 373 219 9 109 464 122 460 2.52e-45 164
MS.gene054489.t1 MTR_7g080900 29.707 478 278 16 2 458 8 448 3.51e-45 164
MS.gene054489.t1 MTR_4g485620 29.343 426 262 10 61 464 45 453 3.60e-45 164
MS.gene054489.t1 MTR_7g011470 28.032 371 224 9 109 464 122 464 4.00e-45 164
MS.gene054489.t1 MTR_7g013180 28.753 473 292 13 6 464 5 446 4.25e-45 163
MS.gene054489.t1 MTR_6g014170 27.572 486 296 14 3 464 7 460 5.55e-45 164
MS.gene054489.t1 MTR_6g035265 34.191 272 154 6 206 458 201 466 7.11e-45 164
MS.gene054489.t1 MTR_7g055710 29.065 492 284 19 6 458 11 476 8.70e-45 164
MS.gene054489.t1 MTR_6g013450 26.815 496 300 15 6 464 10 479 9.81e-45 163
MS.gene054489.t1 MTR_1g107380 31.269 323 185 9 159 464 169 471 1.55e-44 162
MS.gene054489.t1 MTR_4g117960 35.793 271 149 6 207 458 209 473 2.34e-44 162
MS.gene054489.t1 MTR_4g024020 29.065 492 282 19 6 454 9 476 2.39e-44 162
MS.gene054489.t1 MTR_8g059425 28.906 384 232 8 104 464 111 476 2.51e-44 162
MS.gene054489.t1 MTR_5g072860 29.536 474 272 13 6 454 18 454 2.91e-44 162
MS.gene054489.t1 MTR_4g064987 30.361 471 276 19 6 462 8 440 3.74e-44 161
MS.gene054489.t1 MTR_7g070610 38.214 280 138 8 207 464 219 485 3.94e-44 162
MS.gene054489.t1 MTR_4g064987 37.452 259 142 8 207 462 205 446 6.90e-44 160
MS.gene054489.t1 MTR_7g013240 26.667 480 301 17 1 468 1 441 8.06e-44 160
MS.gene054489.t1 MTR_6g013990 29.067 375 221 9 109 461 122 473 9.64e-44 160
MS.gene054489.t1 MTR_0536s0020 33.700 273 156 6 206 459 207 473 1.13e-43 160
MS.gene054489.t1 MTR_7g102560 28.980 490 281 17 6 454 9 472 1.14e-43 160
MS.gene054489.t1 MTR_7g102460 29.459 499 278 18 6 459 9 478 1.16e-43 160
MS.gene054489.t1 MTR_6g014040 27.000 500 302 14 2 464 6 479 1.52e-43 160
MS.gene054489.t1 MTR_6g014310 31.010 287 170 6 184 461 209 476 1.75e-43 160
MS.gene054489.t1 MTR_5g058320 26.931 479 305 13 6 464 10 463 2.00e-43 159
MS.gene054489.t1 MTR_8g071070 27.926 487 309 12 5 469 6 472 5.02e-43 158
MS.gene054489.t1 MTR_4g117890 35.036 274 151 8 206 459 202 468 5.20e-43 159
MS.gene054489.t1 MTR_7g070860 36.232 276 131 7 207 464 213 461 5.48e-43 158
MS.gene054489.t1 MTR_6g013440 26.600 500 301 16 3 464 8 479 5.62e-43 158
MS.gene054489.t1 MTR_7g080950 27.143 490 297 13 1 469 1 451 7.46e-43 157
MS.gene054489.t1 MTR_6g014200 26.854 499 295 15 6 464 7 475 9.24e-43 158
MS.gene054489.t1 MTR_1g062380 28.049 492 286 18 6 454 16 482 1.28e-42 158
MS.gene054489.t1 MTR_6g011340 28.678 401 239 10 93 464 96 478 1.96e-42 157
MS.gene054489.t1 MTR_3g084530 37.079 267 146 8 208 461 211 468 2.80e-42 156
MS.gene054489.t1 MTR_7g070780 36.996 273 138 7 207 458 217 476 3.01e-42 157
MS.gene054489.t1 MTR_8g466240 28.831 496 273 20 2 464 4 452 3.06e-42 156
MS.gene054489.t1 MTR_5g072810 27.083 480 290 17 6 464 12 452 3.25e-42 155
MS.gene054489.t1 MTR_4g485590 30.602 415 230 12 4 402 7 379 3.53e-42 155
MS.gene054489.t1 MTR_6g014150 26.400 500 302 17 3 464 4 475 3.57e-42 156
MS.gene054489.t1 MTR_4g117980 31.832 333 189 9 144 458 162 474 3.98e-42 156
MS.gene054489.t1 MTR_7g070740 28.543 501 287 19 6 464 11 482 4.42e-42 156
MS.gene054489.t1 MTR_4g108250 36.429 280 143 7 207 464 220 486 4.48e-42 156
MS.gene054489.t1 MTR_5g045960 28.261 506 288 20 2 461 5 481 4.71e-42 156
MS.gene054489.t1 MTR_8g083290 36.029 272 139 7 203 458 204 456 5.09e-42 155
MS.gene054489.t1 MTR_7g013260 26.403 481 302 17 1 468 1 442 5.86e-42 155
MS.gene054489.t1 MTR_8g044140 35.484 310 167 9 180 468 154 451 6.01e-42 155
MS.gene054489.t1 MTR_1g107350 34.444 270 155 8 194 454 201 457 8.13e-42 155
MS.gene054489.t1 MTR_3g049970 33.564 289 162 10 194 469 202 473 8.87e-42 155
MS.gene054489.t1 MTR_7g013220 27.500 480 280 17 6 458 5 443 1.42e-41 154
MS.gene054489.t1 MTR_6g014270 26.008 496 305 15 6 464 7 477 1.73e-41 154
MS.gene054489.t1 MTR_4g082820 28.067 481 311 14 3 467 4 465 2.07e-41 154
MS.gene054489.t1 MTR_7g070930 36.429 280 143 7 207 464 220 486 3.45e-41 154
MS.gene054489.t1 MTR_5g045970 35.915 284 144 9 195 454 212 481 3.50e-41 154
MS.gene054489.t1 MTR_6g014187 29.058 382 220 12 109 464 122 478 3.70e-41 154
MS.gene054489.t1 MTR_5g067170 34.815 270 152 6 207 458 209 472 3.91e-41 153
MS.gene054489.t1 MTR_4g118000 28.542 480 276 19 10 458 16 459 4.04e-41 153
MS.gene054489.t1 MTR_4g128720 28.541 473 285 13 6 461 15 451 6.11e-41 152
MS.gene054489.t1 MTR_5g016480 32.707 266 156 7 205 461 215 466 6.36e-41 152
MS.gene054489.t1 MTR_6g013900 26.104 498 304 17 1 461 4 474 8.46e-41 152
MS.gene054489.t1 MTR_7g102450 28.542 487 287 17 6 461 11 467 8.94e-41 152
MS.gene054489.t1 MTR_3g084540 36.466 266 146 8 208 459 211 467 1.13e-40 152
MS.gene054489.t1 MTR_7g070810 36.900 271 141 8 207 461 215 471 1.24e-40 152
MS.gene054489.t1 MTR_2g035040 33.948 271 153 7 207 458 116 379 1.79e-40 150
MS.gene054489.t1 MTR_3g084520 34.848 264 150 7 208 458 211 465 2.39e-40 151
MS.gene054489.t1 MTR_5g016660 34.532 278 151 5 207 464 216 482 2.70e-40 151
MS.gene054489.t1 MTR_1g107360 28.796 382 204 12 105 458 113 454 3.85e-40 150
MS.gene054489.t1 MTR_7g012120 33.704 270 156 6 206 458 213 476 3.99e-40 150
MS.gene054489.t1 MTR_3g069690 33.559 295 174 6 174 462 168 446 4.88e-40 150
MS.gene054489.t1 MTR_1g107365 32.841 271 145 7 200 458 239 484 6.40e-40 150
MS.gene054489.t1 MTR_5g039900 29.782 413 236 12 74 461 96 479 6.67e-40 150
MS.gene054489.t1 MTR_8g088560 27.254 477 299 12 6 464 10 456 1.06e-39 149
MS.gene054489.t1 MTR_1g032490 32.857 280 160 8 194 461 203 466 1.41e-39 149
MS.gene054489.t1 MTR_2g059240 27.515 487 293 15 6 464 13 467 2.47e-39 148
MS.gene054489.t1 MTR_6g035185 30.380 316 189 8 178 471 185 491 2.54e-39 149
MS.gene054489.t1 MTR_6g013920 28.382 377 223 9 109 461 121 474 2.57e-39 148
MS.gene054489.t1 MTR_8g007585 26.987 478 239 16 3 464 7 390 6.43e-39 145
MS.gene054489.t1 MTR_1g107315 32.168 286 166 8 194 467 201 470 6.51e-39 147
MS.gene054489.t1 MTR_7g070910 35.714 280 145 9 207 464 217 483 8.18e-39 147
MS.gene054489.t1 MTR_8g064870 31.317 281 171 8 189 458 197 466 1.23e-38 146
MS.gene054489.t1 MTR_1g107375 32.342 269 152 6 200 459 200 447 1.26e-38 146
MS.gene054489.t1 MTR_6g035295 30.548 383 217 12 111 463 123 486 1.28e-38 147
MS.gene054489.t1 MTR_8g083280 37.255 255 135 8 208 458 221 454 1.63e-38 146
MS.gene054489.t1 MTR_8g032950 33.456 272 154 7 207 458 209 473 2.54e-38 145
MS.gene054489.t1 MTR_7g470610 43.062 209 91 7 207 402 74 267 2.80e-38 141
MS.gene054489.t1 MTR_7g070583 43.062 209 91 7 207 402 74 267 2.80e-38 141
MS.gene054489.t1 MTR_5g040030 26.908 498 302 16 2 461 10 483 3.09e-38 145
MS.gene054489.t1 MTR_8g068330 27.921 505 281 17 3 467 5 466 3.17e-38 145
MS.gene054489.t1 MTR_5g072820 26.403 481 289 17 6 464 10 447 6.13e-38 144
MS.gene054489.t1 MTR_6g014190 30.576 278 171 6 193 464 24 285 1.42e-37 139
MS.gene054489.t1 MTR_6g013960 29.900 301 173 8 179 464 201 478 1.53e-37 143
MS.gene054489.t1 MTR_5g072830 25.577 477 298 15 6 464 10 447 1.60e-37 143
MS.gene054489.t1 MTR_1g040310 35.827 254 131 7 235 468 245 486 1.87e-37 144
MS.gene054489.t1 MTR_3g031400 26.022 465 286 11 5 454 17 438 5.01e-37 142
MS.gene054489.t1 MTR_8g064880 33.333 246 143 9 194 430 204 437 9.60e-37 141
MS.gene054489.t1 MTR_6g014300 25.098 510 280 16 3 464 9 464 9.82e-37 141
MS.gene054489.t1 MTR_7g102520 27.944 501 288 19 6 461 12 484 1.06e-36 141
MS.gene054489.t1 MTR_5g072840 25.000 476 302 13 6 464 10 447 1.57e-36 140
MS.gene054489.t1 MTR_2g034990 32.841 271 156 8 207 458 211 474 1.90e-36 140
MS.gene054489.t1 MTR_2g035020 32.222 270 159 6 207 458 211 474 2.29e-36 140
MS.gene054489.t1 MTR_5g075440 27.253 466 291 15 6 454 10 444 6.99e-36 138
MS.gene054489.t1 MTR_8g043470 27.344 384 215 10 95 461 37 373 7.66e-36 137
MS.gene054489.t1 MTR_7g039550 36.207 232 118 5 241 461 45 257 8.60e-36 134
MS.gene054489.t1 MTR_7g071050 27.389 471 257 18 6 450 13 424 9.29e-36 137
MS.gene054489.t1 MTR_0477s0010 28.826 281 156 5 184 464 79 315 1.08e-35 135
MS.gene054489.t1 MTR_4g082810 28.148 405 257 12 3 390 4 391 1.71e-35 136
MS.gene054489.t1 MTR_4g117950 32.246 276 162 9 206 464 194 461 1.81e-35 137
MS.gene054489.t1 MTR_3g479470 27.054 499 293 17 2 461 9 475 2.25e-35 137
MS.gene054489.t1 MTR_0536s0010 30.909 275 165 10 207 464 209 475 4.19e-35 137
MS.gene054489.t1 MTR_5g029800 31.071 280 169 6 207 468 207 480 6.36e-35 136
MS.gene054489.t1 MTR_1g107285 30.742 283 158 9 193 461 201 459 1.26e-34 135
MS.gene054489.t1 MTR_5g004940 32.710 214 111 6 254 464 193 376 3.31e-34 132
MS.gene054489.t1 MTR_3g031450 24.313 473 286 13 5 454 17 440 4.10e-34 134
MS.gene054489.t1 MTR_8g068340 25.155 485 308 12 3 461 9 464 5.07e-34 133
MS.gene054489.t1 MTR_5g031840 32.090 268 146 9 206 461 214 457 7.11e-34 133
MS.gene054489.t1 MTR_6g078320 25.918 490 323 14 4 468 9 483 1.79e-33 132
MS.gene054489.t1 MTR_5g031830 29.667 300 170 9 179 461 191 466 3.45e-33 131
MS.gene054489.t1 MTR_5g031860 29.843 382 226 12 100 461 106 465 4.89e-33 130
MS.gene054489.t1 MTR_2086s0010 36.757 185 102 5 280 464 1 170 7.54e-33 123
MS.gene054489.t1 MTR_1996s0010 36.757 185 102 5 280 464 1 170 7.54e-33 123
MS.gene054489.t1 MTR_6g014240 26.558 369 206 10 121 464 117 445 7.87e-33 130
MS.gene054489.t1 MTR_7g070870 41.791 201 101 5 207 404 222 409 1.15e-32 129
MS.gene054489.t1 MTR_7g067120 25.966 466 262 16 3 446 6 410 1.19e-32 129
MS.gene054489.t1 MTR_8g068360 34.615 208 121 2 259 463 270 465 2.57e-32 129
MS.gene054489.t1 MTR_5g090690 28.418 373 207 10 65 425 18 342 5.90e-32 126
MS.gene054489.t1 MTR_5g027210 36.316 190 117 1 254 439 271 460 6.21e-32 127
MS.gene054489.t1 MTR_6g052375 30.976 297 141 7 179 468 38 277 3.16e-31 122
MS.gene054489.t1 MTR_5g066410 27.876 452 266 15 9 438 1 414 6.24e-31 124
MS.gene054489.t1 MTR_4g059370 35.000 240 139 5 208 443 144 370 1.14e-30 122
MS.gene054489.t1 MTR_8g007565 27.789 475 262 18 4 438 5 438 1.24e-30 124
MS.gene054489.t1 MTR_5g098960 35.156 256 127 10 196 441 203 429 1.33e-30 124
MS.gene054489.t1 MTR_1g090270 28.233 464 272 17 6 443 15 443 2.62e-30 123
MS.gene054489.t1 MTR_8g007650 27.789 475 262 18 4 438 5 438 2.99e-30 122
MS.gene054489.t1 MTR_4g123553 26.638 458 283 14 3 440 12 436 1.54e-29 120
MS.gene054489.t1 MTR_7g067330 32.906 234 131 7 206 436 190 400 2.32e-29 119
MS.gene054489.t1 MTR_2g008225 26.490 453 295 14 3 440 12 441 4.38e-29 119
MS.gene054489.t1 MTR_6g014185 31.439 264 127 8 202 458 121 337 4.52e-28 115
MS.gene054489.t1 MTR_2g008220 26.593 455 292 15 3 440 11 440 5.93e-28 116
MS.gene054489.t1 MTR_2g008226 27.176 471 290 16 3 446 7 451 3.91e-27 114
MS.gene054489.t1 MTR_6g042310 26.327 471 270 17 2 440 14 439 3.92e-27 114
MS.gene054489.t1 MTR_8g056740 28.958 259 163 6 207 461 113 354 1.20e-26 111
MS.gene054489.t1 MTR_7g070760 31.739 230 108 5 184 404 12 201 1.93e-26 106
MS.gene054489.t1 MTR_5g072850 30.035 283 153 8 183 459 132 375 1.15e-25 108
MS.gene054489.t1 MTR_5g090650 29.282 362 197 15 3 349 2 319 4.93e-25 105
MS.gene054489.t1 MTR_4g077960 31.818 242 144 7 206 442 190 415 1.08e-24 106
MS.gene054489.t1 MTR_3g435310 34.066 182 105 4 260 440 228 395 1.74e-24 105
MS.gene054489.t1 MTR_4g079250 28.846 260 167 6 197 454 202 445 2.28e-24 105
MS.gene054489.t1 MTR_6g014000 39.024 123 70 2 336 458 31 148 8.50e-24 104
MS.gene054489.t1 MTR_2g014900 24.558 452 295 15 1 434 2 425 8.74e-24 103
MS.gene054489.t1 MTR_5g066390 33.533 167 93 5 299 464 64 213 8.77e-24 99.8
MS.gene054489.t1 MTR_2g046620 30.992 242 142 8 206 440 214 437 2.45e-23 102
MS.gene054489.t1 MTR_0536s0030 35.897 156 88 3 318 461 192 347 4.08e-23 100
MS.gene054489.t1 MTR_1g090280 33.511 188 114 3 280 463 133 313 4.48e-23 99.8
MS.gene054489.t1 MTR_6g036650 32.787 183 108 4 259 440 278 446 6.47e-23 101
MS.gene054489.t1 MTR_7g070995 36.232 138 78 2 337 464 6 143 9.83e-23 94.7
MS.gene054489.t1 MTR_6g013680 24.668 377 191 10 109 464 69 373 3.53e-22 98.2
MS.gene054489.t1 MTR_4g079270 23.747 459 305 13 6 446 8 439 3.66e-22 99.4
MS.gene054489.t1 MTR_7g080960 30.570 193 81 2 256 440 323 470 3.71e-22 99.4
MS.gene054489.t1 MTR_6g014160 27.063 303 148 9 109 387 104 357 4.18e-21 95.5
MS.gene054489.t1 MTR_1g107325 37.008 127 71 4 333 454 219 341 1.30e-19 90.5
MS.gene054489.t1 MTR_2g083380 32.800 250 146 8 202 446 224 456 8.90e-18 85.9
MS.gene054489.t1 MTR_6g014186 21.443 499 290 17 3 464 4 437 1.21e-17 85.5
MS.gene054489.t1 MTR_2g083430 23.305 472 285 15 6 443 8 436 2.29e-17 84.7
MS.gene054489.t1 MTR_2g083480 32.093 215 129 7 254 461 253 457 1.20e-16 82.4
MS.gene054489.t1 MTR_8g012735 41.538 130 71 2 1 127 1 128 1.27e-16 76.6
MS.gene054489.t1 MTR_3g009500 27.004 237 154 7 1 225 1 230 5.98e-15 75.5
MS.gene054489.t1 MTR_2g083490 25.586 469 288 17 4 446 6 439 2.42e-14 75.5
MS.gene054489.t1 MTR_6g013435 21.886 297 159 8 179 464 71 305 5.09e-14 73.2
MS.gene054489.t1 MTR_2g083420 35.246 122 75 3 326 443 291 412 5.46e-14 74.3
MS.gene054489.t1 MTR_2g083390 31.944 144 88 4 310 443 269 412 1.11e-12 70.1
MS.gene054489.t1 MTR_3g009520 26.271 236 159 5 1 226 1 231 2.61e-12 67.4
MS.gene054489.t1 MTR_0475s0030 42.424 66 34 1 356 421 13 74 2.73e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054489.t1 AT4G01070 47.537 467 241 4 2 466 4 468 1.38e-157 456
MS.gene054489.t1 AT1G01420 45.610 467 249 5 2 466 4 467 2.84e-149 434
MS.gene054489.t1 AT1G01420 45.610 467 249 5 2 466 7 470 3.10e-149 434
MS.gene054489.t1 AT1G01390 47.009 468 244 4 2 467 4 469 7.37e-146 426
MS.gene054489.t1 AT1G01390 47.009 468 244 4 2 467 21 486 2.05e-145 425
MS.gene054489.t1 AT4G01070 45.533 347 183 5 2 346 4 346 1.17e-99 303
MS.gene054489.t1 AT3G50740 36.897 477 280 11 6 468 7 476 8.04e-96 298
MS.gene054489.t1 AT5G66690 35.579 475 283 12 6 468 7 470 4.42e-94 293
MS.gene054489.t1 AT5G26310 35.158 475 285 11 6 468 7 470 5.20e-91 285
MS.gene054489.t1 AT2G18570 33.474 475 286 13 6 464 5 465 3.45e-87 275
MS.gene054489.t1 AT3G16520 32.974 464 296 6 7 465 6 459 8.06e-83 263
MS.gene054489.t1 AT4G36770 37.093 461 254 15 6 448 4 446 2.97e-82 262
MS.gene054489.t1 AT3G16520 32.739 449 287 6 7 450 6 444 4.91e-79 253
MS.gene054489.t1 AT3G16520 32.739 449 287 6 7 450 6 444 5.63e-79 253
MS.gene054489.t1 AT2G18560 35.789 380 223 7 95 464 7 375 9.36e-79 250
MS.gene054489.t1 AT1G07260 33.333 468 268 17 11 454 13 460 1.61e-66 221
MS.gene054489.t1 AT3G21750 33.970 471 272 13 6 454 4 457 3.31e-66 220
MS.gene054489.t1 AT1G07250 31.579 494 292 17 1 467 1 475 7.70e-63 211
MS.gene054489.t1 AT4G15280 31.524 479 286 15 6 458 4 466 7.04e-62 209
MS.gene054489.t1 AT3G21800 30.833 480 287 16 7 458 6 468 1.40e-61 208
MS.gene054489.t1 AT4G15280 31.524 479 286 15 6 458 36 498 1.52e-61 209
MS.gene054489.t1 AT2G29750 30.328 488 288 17 3 461 5 469 2.37e-61 207
MS.gene054489.t1 AT2G29740 31.458 480 286 17 1 454 1 463 4.33e-61 207
MS.gene054489.t1 AT1G07240 30.642 483 284 15 3 454 2 464 3.79e-60 204
MS.gene054489.t1 AT3G21760 30.769 481 286 14 6 454 4 469 6.63e-59 201
MS.gene054489.t1 AT3G21790 30.398 477 299 15 6 458 4 471 1.29e-58 201
MS.gene054489.t1 AT3G21780 31.504 492 270 18 6 461 4 464 1.15e-57 198
MS.gene054489.t1 AT2G29730 28.931 477 295 16 3 458 2 455 9.96e-56 192
MS.gene054489.t1 AT1G05675 29.461 482 289 13 1 463 1 450 6.66e-54 187
MS.gene054489.t1 AT1G05680 29.228 479 294 10 1 463 1 450 1.26e-53 186
MS.gene054489.t1 AT2G29710 29.106 481 289 15 3 458 2 455 2.51e-53 186
MS.gene054489.t1 AT2G16890 31.042 480 276 14 6 458 9 460 6.67e-53 185
MS.gene054489.t1 AT4G15260 33.148 359 212 10 116 458 1 347 7.36e-53 182
MS.gene054489.t1 AT5G59590 28.694 467 291 15 3 458 7 442 3.55e-51 180
MS.gene054489.t1 AT2G15490 39.552 268 144 5 207 464 220 479 5.90e-51 180
MS.gene054489.t1 AT2G31750 32.174 345 193 7 135 464 135 453 6.35e-51 179
MS.gene054489.t1 AT2G31750 32.174 345 193 7 135 464 135 453 1.61e-50 179
MS.gene054489.t1 AT2G31790 28.926 484 289 12 2 463 4 454 3.39e-50 177
MS.gene054489.t1 AT2G15490 39.179 268 142 5 207 464 220 476 6.87e-50 177
MS.gene054489.t1 AT5G12890 32.200 500 275 20 3 464 7 480 8.02e-50 177
MS.gene054489.t1 AT4G34138 38.433 268 142 6 207 464 223 477 2.87e-49 176
MS.gene054489.t1 AT1G10400 29.757 494 289 17 3 469 4 466 3.58e-49 175
MS.gene054489.t1 AT2G15480 28.854 506 287 12 1 464 5 479 4.45e-49 175
MS.gene054489.t1 AT2G36780 35.880 301 163 8 180 461 195 484 3.56e-48 173
MS.gene054489.t1 AT2G30140 30.369 461 275 13 6 454 13 439 4.28e-48 172
MS.gene054489.t1 AT2G15480 29.183 514 285 12 1 464 5 489 5.67e-48 172
MS.gene054489.t1 AT2G30140 30.303 462 275 13 6 454 13 440 6.33e-48 171
MS.gene054489.t1 AT1G22340 26.978 493 303 14 2 461 9 477 8.23e-48 172
MS.gene054489.t1 AT1G22380 28.195 493 276 18 6 455 13 470 8.56e-48 172
MS.gene054489.t1 AT2G36770 28.163 490 299 15 6 461 14 484 1.55e-47 171
MS.gene054489.t1 AT2G36970 25.152 493 316 11 2 467 6 472 2.50e-47 171
MS.gene054489.t1 AT3G46680 29.412 476 291 18 1 463 4 447 6.49e-47 168
MS.gene054489.t1 AT5G59580 28.326 466 297 14 6 463 9 445 1.04e-46 168
MS.gene054489.t1 AT1G22360 26.380 489 303 12 1 456 5 469 1.65e-46 168
MS.gene054489.t1 AT1G73880 28.893 488 274 18 5 459 13 460 4.63e-46 167
MS.gene054489.t1 AT5G14860 28.717 491 298 14 1 461 3 471 4.94e-46 167
MS.gene054489.t1 AT2G36760 37.121 264 141 7 207 454 223 477 6.84e-46 167
MS.gene054489.t1 AT1G78270 28.571 476 279 15 6 447 13 461 7.42e-46 166
MS.gene054489.t1 AT1G22400 27.327 505 286 19 6 465 13 481 8.73e-46 166
MS.gene054489.t1 AT2G36800 31.649 376 216 10 111 461 124 483 1.82e-45 166
MS.gene054489.t1 AT5G17050 26.947 475 300 11 3 461 9 452 3.05e-45 164
MS.gene054489.t1 AT4G34131 27.912 498 299 15 3 465 7 479 5.88e-45 164
MS.gene054489.t1 AT2G28080 30.199 351 218 8 111 454 129 459 7.26e-45 164
MS.gene054489.t1 AT5G03490 29.218 486 286 18 2 466 15 463 1.50e-44 162
MS.gene054489.t1 AT3G11340 28.448 464 294 13 7 463 10 442 2.13e-44 162
MS.gene054489.t1 AT3G46650 28.421 475 278 17 1 461 5 431 3.53e-44 160
MS.gene054489.t1 AT2G36750 36.531 271 147 7 207 461 218 479 5.38e-44 161
MS.gene054489.t1 AT2G43820 29.106 481 283 15 3 464 4 445 5.60e-44 160
MS.gene054489.t1 AT3G53160 29.150 494 289 17 6 461 8 478 5.63e-44 161
MS.gene054489.t1 AT2G16890 29.638 442 257 13 6 421 9 422 6.52e-44 160
MS.gene054489.t1 AT1G24100 27.216 485 298 13 1 461 1 454 1.63e-43 159
MS.gene054489.t1 AT2G43840 30.000 490 261 20 6 464 7 445 1.68e-43 159
MS.gene054489.t1 AT1G22360 25.971 489 293 12 1 456 5 457 4.14e-43 159
MS.gene054489.t1 AT4G34135 29.116 498 294 12 3 465 8 481 6.50e-43 158
MS.gene054489.t1 AT3G02100 25.934 482 296 12 6 463 13 457 1.16e-42 157
MS.gene054489.t1 AT2G30150 28.692 474 268 14 6 454 13 441 1.34e-42 157
MS.gene054489.t1 AT2G43840 29.412 493 260 20 6 464 7 445 1.94e-42 156
MS.gene054489.t1 AT3G46690 28.139 462 301 12 6 461 9 445 2.95e-42 156
MS.gene054489.t1 AT3G46670 28.172 465 296 13 6 461 9 444 4.57e-42 155
MS.gene054489.t1 AT1G51210 30.310 452 259 16 6 440 20 432 4.60e-42 155
MS.gene054489.t1 AT3G55700 34.021 291 175 7 174 464 176 449 6.37e-42 155
MS.gene054489.t1 AT3G46700 30.831 373 234 9 96 464 91 443 1.51e-41 154
MS.gene054489.t1 AT2G30150 28.723 470 265 14 10 454 1 425 2.83e-41 153
MS.gene054489.t1 AT1G22370 28.454 485 267 19 6 449 13 458 5.29e-41 153
MS.gene054489.t1 AT5G05880 29.810 369 232 9 106 468 104 451 6.58e-41 152
MS.gene054489.t1 AT4G15500 34.296 277 160 9 195 464 200 461 1.29e-40 152
MS.gene054489.t1 AT5G17030 27.366 486 299 17 3 469 9 459 3.33e-40 150
MS.gene054489.t1 AT1G30530 25.474 475 307 11 3 464 9 449 1.27e-39 149
MS.gene054489.t1 AT3G46660 36.522 230 132 4 232 461 236 451 1.56e-39 149
MS.gene054489.t1 AT5G05860 35.907 259 149 6 207 464 204 446 1.08e-38 146
MS.gene054489.t1 AT5G05900 31.522 368 208 12 106 461 108 443 2.07e-38 145
MS.gene054489.t1 AT5G05890 29.706 340 216 7 130 468 138 455 2.82e-38 145
MS.gene054489.t1 AT2G36790 27.345 501 289 15 6 461 13 483 2.94e-38 145
MS.gene054489.t1 AT4G15480 33.214 280 165 8 193 464 212 477 3.21e-38 145
MS.gene054489.t1 AT1G05560 35.686 255 150 6 208 458 200 444 5.14e-38 144
MS.gene054489.t1 AT1G05560 35.686 255 150 6 208 458 250 494 6.28e-38 145
MS.gene054489.t1 AT4G14090 25.486 463 300 12 6 454 13 444 6.46e-38 144
MS.gene054489.t1 AT4G15490 35.338 266 149 9 196 454 206 455 6.86e-38 144
MS.gene054489.t1 AT2G23260 30.526 285 167 5 192 464 187 452 7.66e-38 144
MS.gene054489.t1 AT3G46720 27.883 477 292 15 2 466 5 441 7.94e-38 144
MS.gene054489.t1 AT3G53150 26.772 508 290 18 2 454 18 498 9.43e-38 144
MS.gene054489.t1 AT1G22370 31.250 288 158 8 179 449 24 288 9.83e-38 140
MS.gene054489.t1 AT5G17040 27.197 478 281 15 5 461 4 435 6.57e-37 141
MS.gene054489.t1 AT5G38010 30.959 365 216 10 108 461 110 449 1.53e-36 140
MS.gene054489.t1 AT5G05870 32.692 260 157 5 207 464 210 453 1.68e-36 140
MS.gene054489.t1 AT3G55710 33.445 299 172 9 174 464 174 453 2.42e-36 140
MS.gene054489.t1 AT2G23250 31.071 280 163 7 194 464 176 434 4.37e-35 136
MS.gene054489.t1 AT4G15550 34.981 263 148 8 208 464 227 472 3.25e-34 134
MS.gene054489.t1 AT1G05530 31.317 281 175 7 181 454 174 443 3.28e-34 134
MS.gene054489.t1 AT1G06000 33.840 263 162 6 207 464 177 432 3.94e-34 133
MS.gene054489.t1 AT5G17040 30.935 278 168 5 189 464 81 336 6.08e-34 130
MS.gene054489.t1 AT5G38040 28.228 457 278 15 17 458 21 442 9.95e-34 132
MS.gene054489.t1 AT3G21560 29.930 284 176 7 189 464 203 471 1.09e-33 133
MS.gene054489.t1 AT2G26480 30.375 293 180 6 174 461 168 441 1.15e-33 132
MS.gene054489.t1 AT5G65550 35.593 236 129 7 208 439 220 436 3.24e-30 122
MS.gene054489.t1 AT5G49690 25.431 464 292 11 3 446 7 436 1.79e-29 120
MS.gene054489.t1 AT2G22590 26.371 474 269 16 6 441 15 446 5.48e-28 116
MS.gene054489.t1 AT5G37950 31.802 283 167 10 103 380 77 338 8.57e-28 114
MS.gene054489.t1 AT3G22250 24.094 469 288 20 7 444 9 440 1.39e-27 115
MS.gene054489.t1 AT1G64910 31.359 287 166 9 189 464 177 443 5.80e-27 113
MS.gene054489.t1 AT5G37950 30.450 289 169 9 103 380 77 344 8.48e-27 111
MS.gene054489.t1 AT4G27570 23.965 459 294 12 6 446 7 428 2.13e-24 105
MS.gene054489.t1 AT5G54010 32.323 198 123 3 254 451 244 430 7.00e-23 101
MS.gene054489.t1 AT4G27560 32.961 179 110 1 254 432 244 412 3.03e-22 99.4
MS.gene054489.t1 AT5G53990 34.054 185 110 3 260 442 244 418 4.51e-22 99.0
MS.gene054489.t1 AT1G50580 24.295 461 288 14 1 442 1 419 3.36e-21 96.3
MS.gene054489.t1 AT1G64920 31.841 201 117 5 254 446 238 426 5.51e-20 92.8
MS.gene054489.t1 AT2G22930 30.366 191 121 3 254 442 238 418 8.27e-20 92.0
MS.gene054489.t1 AT3G29630 32.796 186 112 4 260 442 220 395 1.47e-19 91.3
MS.gene054489.t1 AT3G29630 32.796 186 112 4 260 442 246 421 2.01e-19 90.9
MS.gene054489.t1 AT4G09500 32.022 178 109 3 267 442 251 418 3.72e-19 90.1
MS.gene054489.t1 AT4G09500 32.022 178 109 3 267 442 226 393 4.55e-19 89.7
MS.gene054489.t1 AT5G54060 30.964 197 123 4 259 454 267 451 3.25e-17 84.3
MS.gene054489.t1 AT4G34135 26.586 331 202 10 3 304 8 326 3.74e-13 70.9

Find 70 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACATCCTTGTAACTTTAT+AGG 0.215117 7.4:+56078602 None:intergenic
GCTAGTCAATGGGAAAATTT+TGG 0.226430 7.4:-56077714 MS.gene054489:CDS
GTGGGACCCATTACACAAAT+AGG 0.239147 7.4:-56078389 MS.gene054489:CDS
GATTAAGAGTTTGTTGAATC+AGG 0.258195 7.4:+56078849 None:intergenic
CTTGACCCTATTTGTGTAAT+GGG 0.274064 7.4:+56078383 None:intergenic
CAAATCAATGAACTAGCTTT+TGG 0.278166 7.4:-56078248 MS.gene054489:CDS
ATGCAAGTGACATGAAAATT+TGG 0.279288 7.4:+56079001 None:intergenic
TTGGAACGAACAAAAGAAAA+AGG 0.284786 7.4:-56078107 MS.gene054489:CDS
GAAACCTCTTCATCAAGTTT+TGG 0.304863 7.4:+56078650 None:intergenic
TGAGTGGTCAAATATTCATT+TGG 0.332630 7.4:-56078217 MS.gene054489:CDS
GTTTGTTGAATCAGGATTGC+TGG 0.344309 7.4:+56078857 None:intergenic
TTCAAAGCTTGATGAATTGA+TGG 0.367787 7.4:+56078818 None:intergenic
GGTAAGTCTTGTTTGTTGAT+TGG 0.374729 7.4:+56078893 None:intergenic
GAGTGGTCAAATATTCATTT+GGG 0.385499 7.4:-56078216 MS.gene054489:CDS
TATAAAAGCATTGGAACAAA+AGG 0.401193 7.4:-56078438 MS.gene054489:CDS
AAAATTGAGTTTATGTTTGG+TGG 0.402873 7.4:+56078923 None:intergenic
ATGGTTTGTGACTAATCTTT+TGG 0.405964 7.4:+56079024 None:intergenic
ATGGTCTTAAAGTGGCTTTA+AGG 0.413506 7.4:-56077911 MS.gene054489:CDS
GGAAGATCAATACCATTGAT+TGG 0.420617 7.4:+56078578 None:intergenic
ACTTGACCCTATTTGTGTAA+TGG 0.427102 7.4:+56078382 None:intergenic
TGTCACACCTGGCTAGTCAA+TGG 0.443666 7.4:-56077725 MS.gene054489:CDS
AACAATGGCCAAGCTACTAT+TGG 0.445439 7.4:+56077969 None:intergenic
CAAGGATGTTTACCAATCAA+TGG 0.457730 7.4:-56078590 MS.gene054489:CDS
ACTTGCATCATTCCTTCACT+TGG 0.461714 7.4:-56078986 MS.gene054489:CDS
GTCACACCTGGCTAGTCAAT+GGG 0.464258 7.4:-56077724 MS.gene054489:CDS
ATCAAGTGCTATAAAAGCAT+TGG 0.465790 7.4:-56078447 MS.gene054489:CDS
ATGAACATGAATGTTTGAAA+TGG 0.468686 7.4:-56078340 MS.gene054489:CDS
TGGGACCCATTACACAAATA+GGG 0.471912 7.4:-56078388 MS.gene054489:CDS
AGTAGCTTGGCCATTGTTTG+CGG 0.478287 7.4:-56077964 MS.gene054489:CDS
TGTGTGATGGAAGGAGAAGA+AGG 0.488576 7.4:-56077831 MS.gene054489:CDS
GAAAGTACAAAAGCTGAAGA+AGG 0.489299 7.4:+56078689 None:intergenic
TTGTGGTTGGAATTCAACTT+TGG 0.494168 7.4:-56078012 MS.gene054489:CDS
GATGGAAGGAGAAGAAGGTA+AGG 0.497527 7.4:-56077826 MS.gene054489:CDS
TGCTTAAGTATTTCAACTTG+AGG 0.511748 7.4:+56078062 None:intergenic
ATAGCTGTGATTCCAAGTCC+TGG 0.527937 7.4:-56079079 MS.gene054489:CDS
AAATATTCATTTGGGTTGTG+AGG 0.529030 7.4:-56078208 MS.gene054489:CDS
TATGCCAAAACTTGATGAAG+AGG 0.533532 7.4:-56078654 MS.gene054489:CDS
ATACTTAAGCAAAATTCAGT+TGG 0.534703 7.4:-56078050 MS.gene054489:CDS
AAGTCTTGTTTGTTGATTGG+TGG 0.544881 7.4:+56078896 None:intergenic
ATAAAAGCATTGGAACAAAA+GGG 0.548616 7.4:-56078437 MS.gene054489:CDS
CAAGAACCTATAAAGTTACA+AGG 0.551191 7.4:-56078608 MS.gene054489:CDS
AATATTCATTTGGGTTGTGA+GGG 0.551933 7.4:-56078207 MS.gene054489:CDS
TCAACTTGAGGAGCCCATGA+TGG 0.552660 7.4:+56078074 None:intergenic
AGATGATGACATTGTGGTAA+AGG 0.553765 7.4:-56077877 MS.gene054489:CDS
TCAAGTAACAATGATGTTGT+TGG 0.571362 7.4:-56078365 MS.gene054489:CDS
ATTCTACTATTGGGACTAAG+TGG 0.572669 7.4:+56079050 None:intergenic
AAAGTACAAAAGCTGAAGAA+GGG 0.573723 7.4:+56078690 None:intergenic
GCATTGGAACAAAAGGGTGA+TGG 0.574375 7.4:-56078431 MS.gene054489:CDS
GTTATGTGATGGTCTTAAAG+TGG 0.579133 7.4:-56077919 MS.gene054489:CDS
GTTGCTTGTTCCGCAAACAA+TGG 0.580532 7.4:+56077954 None:intergenic
AATACAGACTTTGTCACACC+TGG 0.582261 7.4:-56077736 MS.gene054489:CDS
AAGTGGCTGAAACCAGGACT+TGG 0.585257 7.4:+56079067 None:intergenic
ATGGAAGGAGAAGAAGGTAA+GGG 0.587313 7.4:-56077825 MS.gene054489:CDS
GGGACTAAGTGGCTGAAACC+AGG 0.591109 7.4:+56079061 None:intergenic
AAGTGACATGAAAATTTGGA+TGG 0.591799 7.4:+56079005 None:intergenic
AACTTTGGAGAGTATACAAG+AGG 0.593353 7.4:-56077997 MS.gene054489:CDS
GCTGCTAATGCACTAAAAGA+TGG 0.594577 7.4:-56077768 MS.gene054489:CDS
ATTTGTGTAATGGGTCCCAC+AGG 0.598751 7.4:+56078392 None:intergenic
AACAAACAAGACTTACCTCA+AGG 0.611556 7.4:-56078887 MS.gene054489:CDS
ATGATTAAGTGTGTGATGGA+AGG 0.626257 7.4:-56077840 MS.gene054489:CDS
AATGTTGTTATGTTATGTGA+TGG 0.630156 7.4:-56077930 MS.gene054489:CDS
ACTTTGGAGAGTATACAAGA+GGG 0.634968 7.4:-56077996 MS.gene054489:CDS
ATTGCTGGATATACTCCTTG+AGG 0.640036 7.4:+56078872 None:intergenic
ATATGAAGATGATGACATTG+TGG 0.645021 7.4:-56077883 MS.gene054489:CDS
AAATATGATTAAGTGTGTGA+TGG 0.659853 7.4:-56077844 MS.gene054489:CDS
TTTGGAGAGTATACAAGAGG+GGG 0.660143 7.4:-56077994 MS.gene054489:CDS
GCAGCACTAACTGAATCACT+TGG 0.668446 7.4:+56078182 None:intergenic
CTTTGGAGAGTATACAAGAG+GGG 0.690736 7.4:-56077995 MS.gene054489:CDS
GCTAATGCACTAAAAGATGG+TGG 0.694120 7.4:-56077765 MS.gene054489:CDS
TCTGGTGGTGAACCAAGTGA+AGG 0.711003 7.4:+56078974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAATTGAGTTTATGTT+TGG + chr7.4:56077884-56077903 None:intergenic 20.0%
!!! CTTTGAAATTTTTACCAAAA+GGG - chr7.4:56078668-56078687 MS.gene054489:CDS 20.0%
!!! TTTTGGTAAATTCTACTATT+GGG + chr7.4:56077763-56077782 None:intergenic 20.0%
! AAAAATATGCATTTGGTTGA+TGG - chr7.4:56078301-56078320 MS.gene054489:CDS 25.0%
! AAAATTGAGTTTATGTTTGG+TGG + chr7.4:56077881-56077900 None:intergenic 25.0%
! AAACATCCTTGTAACTTTAT+AGG + chr7.4:56078202-56078221 None:intergenic 25.0%
! AAATATGATTAAGTGTGTGA+TGG - chr7.4:56078957-56078976 MS.gene054489:CDS 25.0%
! AATGTTGTTATGTTATGTGA+TGG - chr7.4:56078871-56078890 MS.gene054489:CDS 25.0%
! ATACTTAAGCAAAATTCAGT+TGG - chr7.4:56078751-56078770 MS.gene054489:CDS 25.0%
! ATGAACATGAATGTTTGAAA+TGG - chr7.4:56078461-56078480 MS.gene054489:CDS 25.0%
!! ACATACAAAACAGAATTTTG+TGG + chr7.4:56078499-56078518 None:intergenic 25.0%
!! ATTTTTACCAAAAGGGTTTT+TGG - chr7.4:56078675-56078694 MS.gene054489:CDS 25.0%
!! ATTTTTGCACTAGAAACAAT+AGG - chr7.4:56078049-56078068 MS.gene054489:CDS 25.0%
!! CCTTTTGGTAAAAATTTCAA+AGG + chr7.4:56078670-56078689 None:intergenic 25.0%
!! CTTTTGGTAAATTCTACTAT+TGG + chr7.4:56077764-56077783 None:intergenic 25.0%
!! TCTGTTTTGTATGTTTCTTT+TGG - chr7.4:56078505-56078524 MS.gene054489:CDS 25.0%
!!! AGATATGATTTTGATGAATC+TGG + chr7.4:56077848-56077867 None:intergenic 25.0%
!!! ATAAAAGCATTGGAACAAAA+GGG - chr7.4:56078364-56078383 MS.gene054489:CDS 25.0%
!!! CCTTTGAAATTTTTACCAAA+AGG - chr7.4:56078667-56078686 MS.gene054489:CDS 25.0%
!!! TATAAAAGCATTGGAACAAA+AGG - chr7.4:56078363-56078382 MS.gene054489:CDS 25.0%
AAAGTACAAAAGCTGAAGAA+GGG + chr7.4:56078114-56078133 None:intergenic 30.0%
AAGTGACATGAAAATTTGGA+TGG + chr7.4:56077799-56077818 None:intergenic 30.0%
ACGTGCAAAAAATATGCATT+TGG - chr7.4:56078294-56078313 MS.gene054489:CDS 30.0%
ATATGAAGATGATGACATTG+TGG - chr7.4:56078918-56078937 MS.gene054489:CDS 30.0%
ATGCAAGTGACATGAAAATT+TGG + chr7.4:56077803-56077822 None:intergenic 30.0%
CAAGAACCTATAAAGTTACA+AGG - chr7.4:56078193-56078212 MS.gene054489:CDS 30.0%
GAGTGGTCAAATATTCATTT+GGG - chr7.4:56078585-56078604 MS.gene054489:CDS 30.0%
TCAAGTAACAATGATGTTGT+TGG - chr7.4:56078436-56078455 MS.gene054489:CDS 30.0%
TGAGTGGTCAAATATTCATT+TGG - chr7.4:56078584-56078603 MS.gene054489:CDS 30.0%
TGCTTAAGTATTTCAACTTG+AGG + chr7.4:56078742-56078761 None:intergenic 30.0%
TTCAAAGCTTGATGAATTGA+TGG + chr7.4:56077986-56078005 None:intergenic 30.0%
TTGGAACGAACAAAAGAAAA+AGG - chr7.4:56078694-56078713 MS.gene054489:CDS 30.0%
! ACAAAACAGAATTTTGTGGT+TGG + chr7.4:56078495-56078514 None:intergenic 30.0%
! ACACTTGATCTATCTTTTGT+TGG + chr7.4:56078253-56078272 None:intergenic 30.0%
! ATCAAGTGCTATAAAAGCAT+TGG - chr7.4:56078354-56078373 MS.gene054489:CDS 30.0%
!! AAATATTCATTTGGGTTGTG+AGG - chr7.4:56078593-56078612 MS.gene054489:CDS 30.0%
!! AATATTCATTTGGGTTGTGA+GGG - chr7.4:56078594-56078613 MS.gene054489:CDS 30.0%
!! ATGGTTTGTGACTAATCTTT+TGG + chr7.4:56077780-56077799 None:intergenic 30.0%
!! GATTAAGAGTTTGTTGAATC+AGG + chr7.4:56077955-56077974 None:intergenic 30.0%
!! TATGATTTTGATGAATCTGG+TGG + chr7.4:56077845-56077864 None:intergenic 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG - chr7.4:56078511-56078530 MS.gene054489:CDS 30.0%
!!! AAAAATCAGCTTTTTTCCTG+TGG - chr7.4:56078393-56078412 MS.gene054489:CDS 30.0%
!!! AAAATCAGCTTTTTTCCTGT+GGG - chr7.4:56078394-56078413 MS.gene054489:CDS 30.0%
!!! CAAATCAATGAACTAGCTTT+TGG - chr7.4:56078553-56078572 MS.gene054489:CDS 30.0%
!!! CATTTTTAAGTCATTGTGGT+TGG - chr7.4:56078776-56078795 MS.gene054489:CDS 30.0%
AACAAACAAGACTTACCTCA+AGG - chr7.4:56077914-56077933 MS.gene054489:CDS 35.0%
ACTTGACCCTATTTGTGTAA+TGG + chr7.4:56078422-56078441 None:intergenic 35.0%
AGATGATGACATTGTGGTAA+AGG - chr7.4:56078924-56078943 MS.gene054489:CDS 35.0%
ATTCTACTATTGGGACTAAG+TGG + chr7.4:56077754-56077773 None:intergenic 35.0%
CAAGGATGTTTACCAATCAA+TGG - chr7.4:56078211-56078230 MS.gene054489:CDS 35.0%
CTTGACCCTATTTGTGTAAT+GGG + chr7.4:56078421-56078440 None:intergenic 35.0%
GGAAGATCAATACCATTGAT+TGG + chr7.4:56078226-56078245 None:intergenic 35.0%
TATGCCAAAACTTGATGAAG+AGG - chr7.4:56078147-56078166 MS.gene054489:CDS 35.0%
TTGTGGTTGGAATTCAACTT+TGG - chr7.4:56078789-56078808 MS.gene054489:CDS 35.0%
! AACTTTGGAGAGTATACAAG+AGG - chr7.4:56078804-56078823 MS.gene054489:CDS 35.0%
! ACTTTGGAGAGTATACAAGA+GGG - chr7.4:56078805-56078824 MS.gene054489:CDS 35.0%
! AGTCAATGGGAAAATTTTGG+TGG - chr7.4:56079090-56079109 MS.gene054489:CDS 35.0%
! ATGATTAAGTGTGTGATGGA+AGG - chr7.4:56078961-56078980 MS.gene054489:CDS 35.0%
! ATGGTCTTAAAGTGGCTTTA+AGG - chr7.4:56078890-56078909 MS.gene054489:CDS 35.0%
! GAAACCTCTTCATCAAGTTT+TGG + chr7.4:56078154-56078173 None:intergenic 35.0%
! GAAAGTACAAAAGCTGAAGA+AGG + chr7.4:56078115-56078134 None:intergenic 35.0%
! GATCTATCTTTTGTTGGTGT+TGG + chr7.4:56078247-56078266 None:intergenic 35.0%
! GCTAGTCAATGGGAAAATTT+TGG - chr7.4:56079087-56079106 MS.gene054489:CDS 35.0%
! GTTATGTGATGGTCTTAAAG+TGG - chr7.4:56078882-56078901 MS.gene054489:CDS 35.0%
!! AAGTCTTGTTTGTTGATTGG+TGG + chr7.4:56077908-56077927 None:intergenic 35.0%
!! GGTAAGTCTTGTTTGTTGAT+TGG + chr7.4:56077911-56077930 None:intergenic 35.0%
!! GTCAATGGGAAAATTTTGGT+GGG - chr7.4:56079091-56079110 MS.gene054489:CDS 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG - chr7.4:56078514-56078533 MS.gene054489:CDS 35.0%
!!! CAATGAACTAGCTTTTGGTT+TGG - chr7.4:56078558-56078577 MS.gene054489:CDS 35.0%
!!! GGTGCATTTTTAAGTCATTG+TGG - chr7.4:56078772-56078791 MS.gene054489:CDS 35.0%
AACAATGGCCAAGCTACTAT+TGG + chr7.4:56078835-56078854 None:intergenic 40.0%
AATACAGACTTTGTCACACC+TGG - chr7.4:56079065-56079084 MS.gene054489:CDS 40.0%
ACTTGCATCATTCCTTCACT+TGG - chr7.4:56077815-56077834 MS.gene054489:CDS 40.0%
ATGGAAGGAGAAGAAGGTAA+GGG - chr7.4:56078976-56078995 MS.gene054489:CDS 40.0%
ATTGCTGGATATACTCCTTG+AGG + chr7.4:56077932-56077951 None:intergenic 40.0%
GCTAATGCACTAAAAGATGG+TGG - chr7.4:56079036-56079055 MS.gene054489:CDS 40.0%
GCTGCTAATGCACTAAAAGA+TGG - chr7.4:56079033-56079052 MS.gene054489:CDS 40.0%
TGGGACCCATTACACAAATA+GGG - chr7.4:56078413-56078432 MS.gene054489:CDS 40.0%
! AAGGCTTGATTTTGCCATCA+TGG - chr7.4:56078713-56078732 MS.gene054489:CDS 40.0%
! AGGCTTGATTTTGCCATCAT+GGG - chr7.4:56078714-56078733 MS.gene054489:CDS 40.0%
! CTTTGGAGAGTATACAAGAG+GGG - chr7.4:56078806-56078825 MS.gene054489:CDS 40.0%
! GTTCGTTCCAAAAACCCTTT+TGG + chr7.4:56078685-56078704 None:intergenic 40.0%
! GTTTGTTGAATCAGGATTGC+TGG + chr7.4:56077947-56077966 None:intergenic 40.0%
! TTTGGAGAGTATACAAGAGG+GGG - chr7.4:56078807-56078826 MS.gene054489:CDS 40.0%
!! AATTTTCCCATTGACTAGCC+AGG + chr7.4:56079086-56079105 None:intergenic 40.0%
!!! GCTTTTGGTTTGGAATTGAG+TGG - chr7.4:56078568-56078587 MS.gene054489:CDS 40.0%
AGTAGCTTGGCCATTGTTTG+CGG - chr7.4:56078837-56078856 MS.gene054489:CDS 45.0%
ATAGCTGTGATTCCAAGTCC+TGG - chr7.4:56077722-56077741 MS.gene054489:CDS 45.0%
GATGGAAGGAGAAGAAGGTA+AGG - chr7.4:56078975-56078994 MS.gene054489:CDS 45.0%
GCAGCACTAACTGAATCACT+TGG + chr7.4:56078622-56078641 None:intergenic 45.0%
GCATTGGAACAAAAGGGTGA+TGG - chr7.4:56078370-56078389 MS.gene054489:CDS 45.0%
GTGGGACCCATTACACAAAT+AGG - chr7.4:56078412-56078431 MS.gene054489:CDS 45.0%
GTTGCTTGTTCCGCAAACAA+TGG + chr7.4:56078850-56078869 None:intergenic 45.0%
! TGTGTGATGGAAGGAGAAGA+AGG - chr7.4:56078970-56078989 MS.gene054489:CDS 45.0%
!! ATTTGTGTAATGGGTCCCAC+AGG + chr7.4:56078412-56078431 None:intergenic 45.0%
AAGTGGCTGAAACCAGGACT+TGG + chr7.4:56077737-56077756 None:intergenic 50.0%
TCAACTTGAGGAGCCCATGA+TGG + chr7.4:56078730-56078749 None:intergenic 50.0%
! GTCACACCTGGCTAGTCAAT+GGG - chr7.4:56079077-56079096 MS.gene054489:CDS 50.0%
! TCTGGTGGTGAACCAAGTGA+AGG + chr7.4:56077830-56077849 None:intergenic 50.0%
! TGTCACACCTGGCTAGTCAA+TGG - chr7.4:56079076-56079095 MS.gene054489:CDS 50.0%
GGGACTAAGTGGCTGAAACC+AGG + chr7.4:56077743-56077762 None:intergenic 55.0%
!! AGGGGGTGCCAATAGTAGCT+TGG - chr7.4:56078824-56078843 MS.gene054489:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 56077704 56079119 56077704 ID=MS.gene054489
chr7.4 mRNA 56077704 56079119 56077704 ID=MS.gene054489.t1;Parent=MS.gene054489
chr7.4 exon 56077704 56079119 56077704 ID=MS.gene054489.t1.exon1;Parent=MS.gene054489.t1
chr7.4 CDS 56077704 56079119 56077704 ID=cds.MS.gene054489.t1;Parent=MS.gene054489.t1
Gene Sequence

>MS.gene054489

ATGGCAAAAACAACTCACATAGCTGTGATTCCAAGTCCTGGTTTCAGCCACTTAGTCCCAATAGTAGAATTTACCAAAAGATTAGTCACAAACCATCCAAATTTTCATGTCACTTGCATCATTCCTTCACTTGGTTCACCACCAGATTCATCAAAATCATATCTTCAAACAATTCCACCAAACATAAACTCAATTTTTCTTCCACCAATCAACAAACAAGACTTACCTCAAGGAGTATATCCAGCAATCCTGATTCAACAAACTCTTAATCTCTCTCTACCATCAATTCATCAAGCTTTGAAATCTTTGAGTTCAAAAGCACATTTAGTTGCTATAATTGCTGATATTTTTGCACTAGAAACAATAGGTTTTGCAAAAGAGTTCAACTCTTTGTTTTTTCTTTACTTCCCTTCTTCAGCTTTTGTACTTTCACTTGTTTTACATATGCCAAAACTTGATGAAGAGGTTTCATGTGAATACAAAGAATTACAAGAACCTATAAAGTTACAAGGATGTTTACCAATCAATGGTATTGATCTTCCAACACCAACAAAAGATAGATCAAGTGTAGCTTACAAAATGCTTCTTCAACGTGCAAAAAATATGCATTTGGTTGATGGAATCTTGTTTAATAGCTTCTTAGAATTAGAATCAAGTGCTATAAAAGCATTGGAACAAAAGGGTGATGGAAAAATCAGCTTTTTTCCTGTGGGACCCATTACACAAATAGGGTCAAGTAACAATGATGTTGTTGGTGATGAACATGAATGTTTGAAATGGTTGAAAAACCAACCACAAAATTCTGTTTTGTATGTTTCTTTTGGAAGTGGTGGAACACTTTCTCAAAGACAAATCAATGAACTAGCTTTTGGTTTGGAATTGAGTGGTCAAATATTCATTTGGGTTGTGAGGGCACCAAGTGATTCAGTTAGTGCTGCTTATCTTGAAACTACTAGTGAAGATCCTTTGAAATTTTTACCAAAAGGGTTTTTGGAACGAACAAAAGAAAAAGGCTTGATTTTGCCATCATGGGCTCCTCAAGTTGAAATACTTAAGCAAAATTCAGTTGGTGCATTTTTAAGTCATTGTGGTTGGAATTCAACTTTGGAGAGTATACAAGAGGGGGTGCCAATAGTAGCTTGGCCATTGTTTGCGGAACAAGCAACGAATGTTGTTATGTTATGTGATGGTCTTAAAGTGGCTTTAAGGTTGAAATATGAAGATGATGACATTGTGGTAAAGGAGAAAATTGCAAATATGATTAAGTGTGTGATGGAAGGAGAAGAAGGTAAGGGAATGCGTGAAAGAATGAAGAGTTTAAAAGAATATGCTGCTAATGCACTAAAAGATGGTGGTTCTTCAATACAGACTTTGTCACACCTGGCTAGTCAATGGGAAAATTTTGGTGGGACTTAG

Protein sequence

>MS.gene054489.t1

MAKTTHIAVIPSPGFSHLVPIVEFTKRLVTNHPNFHVTCIIPSLGSPPDSSKSYLQTIPPNINSIFLPPINKQDLPQGVYPAILIQQTLNLSLPSIHQALKSLSSKAHLVAIIADIFALETIGFAKEFNSLFFLYFPSSAFVLSLVLHMPKLDEEVSCEYKELQEPIKLQGCLPINGIDLPTPTKDRSSVAYKMLLQRAKNMHLVDGILFNSFLELESSAIKALEQKGDGKISFFPVGPITQIGSSNNDVVGDEHECLKWLKNQPQNSVLYVSFGSGGTLSQRQINELAFGLELSGQIFIWVVRAPSDSVSAAYLETTSEDPLKFLPKGFLERTKEKGLILPSWAPQVEILKQNSVGAFLSHCGWNSTLESIQEGVPIVAWPLFAEQATNVVMLCDGLKVALRLKYEDDDIVVKEKIANMIKCVMEGEEGKGMRERMKSLKEYAANALKDGGSSIQTLSHLASQWENFGGT