AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66384

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66384.t1 MTR_6g090130 98.020 505 10 0 1 505 1 505 0.0 1025
MS.gene66384.t1 MTR_8g102190 84.989 453 67 1 4 455 7 459 0.0 820
MS.gene66384.t1 MTR_3g110395 78.893 488 98 2 4 486 8 495 0.0 805
MS.gene66384.t1 MTR_2g100710 77.728 449 98 2 15 462 18 465 0.0 721
MS.gene66384.t1 MTR_1g090300 69.283 446 134 1 14 459 84 526 0.0 664
MS.gene66384.t1 MTR_8g102190 84.469 367 56 1 4 369 7 373 0.0 662
MS.gene66384.t1 MTR_8g102190 84.900 351 52 1 4 353 7 357 0.0 637
MS.gene66384.t1 MTR_2g100710 79.706 340 68 1 15 353 18 357 0.0 565
MS.gene66384.t1 MTR_4g134290 53.986 439 192 5 17 451 27 459 2.26e-168 483
MS.gene66384.t1 MTR_8g069040 46.623 459 210 9 20 450 78 529 3.26e-134 399
MS.gene66384.t1 MTR_5g032570 51.979 379 174 4 74 450 161 533 2.67e-131 392
MS.gene66384.t1 MTR_2g100670 54.098 122 33 4 264 383 31 131 2.19e-27 114
MS.gene66384.t1 MTR_2g066850 70.270 74 21 1 163 236 389 461 2.29e-23 104
MS.gene66384.t1 MTR_4g062050 63.934 61 21 1 346 406 3 62 6.82e-18 82.0
MS.gene66384.t1 MTR_4g132700 26.396 197 134 3 86 273 95 289 1.97e-12 70.1
MS.gene66384.t1 MTR_2g025020 26.425 193 135 3 88 273 93 285 5.61e-12 68.6
MS.gene66384.t1 MTR_4g079180 74.359 39 10 0 368 406 56 94 1.23e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66384.t1 AT4G26270 79.503 483 97 2 4 486 7 487 0.0 805
MS.gene66384.t1 AT5G56630 81.303 476 81 3 5 480 8 475 0.0 805
MS.gene66384.t1 AT4G29220 80.846 449 83 2 4 451 8 454 0.0 764
MS.gene66384.t1 AT4G32840 79.730 444 87 1 7 450 11 451 0.0 757
MS.gene66384.t1 AT5G61580 68.936 470 137 1 14 483 68 528 0.0 695
MS.gene66384.t1 AT5G61580 68.936 470 136 2 14 483 68 527 0.0 690
MS.gene66384.t1 AT5G47810 54.306 418 188 2 35 449 21 438 9.10e-165 474
MS.gene66384.t1 AT2G22480 47.380 458 207 8 20 450 87 537 3.22e-138 409
MS.gene66384.t1 AT1G12000 26.601 203 142 3 78 273 85 287 3.64e-13 72.4
MS.gene66384.t1 AT4G04040 27.941 204 139 4 78 273 86 289 4.14e-13 72.0

Find 121 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGAAATCAGCCGCAATT+TGG 0.270125 6.2:-87787290 MS.gene66384:CDS
GTCCAAGGGGAGTACATTTC+CGG 0.297178 6.2:-87790261 MS.gene66384:CDS
TGATGTGAAGGGAGGATATA+GGG 0.300133 6.2:-87789903 MS.gene66384:intron
ACTGAACCTAAGGTTATTAC+TGG 0.316153 6.2:-87791435 MS.gene66384:CDS
CTTGCTCAAAGTGCTGTTCA+TGG 0.317363 6.2:-87788069 MS.gene66384:CDS
GGCAAGAAACAGGATGCTTC+TGG 0.332763 6.2:-87788569 MS.gene66384:CDS
TTGATGTGAAGGGAGGATAT+AGG 0.334485 6.2:-87789904 MS.gene66384:intron
ATGGATATCTCAAAGTATTA+AGG 0.339066 6.2:-87788519 MS.gene66384:intron
AATGGGCAGGGTCTTCTCTT+TGG 0.343848 6.2:+87788268 None:intergenic
CCTATATATTTGAGAGTAAT+GGG 0.345012 6.2:+87788251 None:intergenic
TGTTGACTGTTGCTTGATTC+CGG 0.345057 6.2:-87788726 MS.gene66384:CDS
GATAGAAGGCTCAAGGAAAA+TGG 0.354488 6.2:-87788656 MS.gene66384:CDS
CCCATTACTCTCAAATATAT+AGG 0.357787 6.2:-87788251 MS.gene66384:intron
GATGAAATCAGCCGCAATTT+GGG 0.363995 6.2:-87787289 MS.gene66384:CDS
CAGATTATTGACAAGTCCTT+TGG 0.365188 6.2:-87789255 MS.gene66384:CDS
GAATTTCAGGTTTATATCAT+TGG 0.372633 6.2:-87789668 MS.gene66384:intron
CTGCGTACGGGCGGGATATC+CGG 0.372731 6.2:-87787238 MS.gene66384:CDS
TATGGCGTGACTCGAGTTCT+TGG 0.377837 6.2:-87790014 MS.gene66384:CDS
GGGTTGTCTTGCAAAGGATT+AGG 0.379111 6.2:+87790926 None:intergenic
AACAAACTTCTTCAAGATGT+TGG 0.386582 6.2:-87788545 MS.gene66384:CDS
TGTATGTTATTAACACTTGA+AGG 0.388129 6.2:+87789848 None:intergenic
GAGAGACATACTGGAAGATC+AGG 0.404517 6.2:+87791363 None:intergenic
GGTCTCAAATGTTCGGTTGT+AGG 0.421467 6.2:-87789430 MS.gene66384:CDS
ACAAACTTCTTCAAGATGTT+GGG 0.423102 6.2:-87788544 MS.gene66384:CDS
TCTGCAATCTGGCAAGAAAC+AGG 0.429425 6.2:-87788579 MS.gene66384:CDS
TTTATGAATATATAGATAGA+AGG 0.441136 6.2:-87788670 MS.gene66384:CDS
TACCGGGATATCGTTATCAA+TGG 0.448113 6.2:+87789396 None:intergenic
ACCTATATATTTGAGAGTAA+TGG 0.448645 6.2:+87788250 None:intergenic
ACATTGTCAGAAGCATTACT+TGG 0.461087 6.2:+87788105 None:intergenic
TGTAGCTTACACCATATGTA+TGG 0.463233 6.2:-87790032 MS.gene66384:CDS
TGCGGTACCAGTCCTGCGTA+CGG 0.464772 6.2:-87787251 MS.gene66384:CDS
TCTTCTGAACAATGTCCATC+TGG 0.465286 6.2:+87787322 None:intergenic
CGCCGGAAATGTACTCCCCT+TGG 0.465388 6.2:+87790259 None:intergenic
TCAAGATCGCGGAATCAATC+AGG 0.466086 6.2:-87789756 MS.gene66384:intron
TGGCTTTGACACTGCTGTTG+AGG 0.466310 6.2:-87789235 MS.gene66384:CDS
CACTTTACAACTGAGTAAGC+AGG 0.467208 6.2:+87790905 None:intergenic
GTTTATATCATTGGAGGAGA+TGG 0.470046 6.2:-87789659 MS.gene66384:CDS
CTGGACTCAACACTGTGATA+AGG 0.471980 6.2:-87790064 MS.gene66384:CDS
CTCGAGTCACGCCATACATA+TGG 0.473209 6.2:+87790021 None:intergenic
GATTGCTGAAGGAGCGGGAC+AGG 0.476015 6.2:-87788618 MS.gene66384:CDS
TGGACTCAACACTGTGATAA+GGG 0.478680 6.2:-87790063 MS.gene66384:CDS
CCAGGACCTTCGAGGTAAAA+CGG 0.484753 6.2:+87788698 None:intergenic
TCTAATGAACTTACATAGAA+AGG 0.485095 6.2:+87787985 None:intergenic
TTCTTCAAGATGTTGGGCTA+TGG 0.487077 6.2:-87788538 MS.gene66384:CDS
CTTACCGAGAGTCTGCAATC+TGG 0.495651 6.2:-87788590 MS.gene66384:CDS
GATGTGAAGGGAGGATATAG+GGG 0.497341 6.2:-87789902 MS.gene66384:intron
CTTTGACACTGCTGTTGAGG+AGG 0.498783 6.2:-87789232 MS.gene66384:CDS
GGAGTACATTTCCGGCGCGC+TGG 0.500983 6.2:-87790253 MS.gene66384:CDS
TATATTTGAGAGTAATGGGC+AGG 0.508452 6.2:+87788255 None:intergenic
GGAGCAATGGCAGGTTACAC+TGG 0.509720 6.2:-87788048 MS.gene66384:CDS
GATGGGTTTAACTGAACCTA+AGG 0.513157 6.2:-87791445 MS.gene66384:CDS
GCTGTTCATGGAGCAATGGC+AGG 0.515599 6.2:-87788057 MS.gene66384:CDS
GCGCGCTGGACCGCGTCAGA+AGG 0.515644 6.2:-87790239 MS.gene66384:intron
TTTCAGGTTTATATCATTGG+AGG 0.516064 6.2:-87789665 MS.gene66384:intron
ATCCCGCCCGTACGCAGGAC+TGG 0.522260 6.2:+87787244 None:intergenic
TGGAACAGCTCGGATCATAT+AGG 0.524285 6.2:+87788125 None:intergenic
GCAGGACCAGTAATAACCTT+AGG 0.527394 6.2:+87791429 None:intergenic
CTTGCCAGATTGCAGACTCT+CGG 0.528413 6.2:+87788586 None:intergenic
GCGGTACCAGTCCTGCGTAC+GGG 0.531407 6.2:-87787250 MS.gene66384:CDS
AAGGCGTGGTCTCAAATGTT+CGG 0.532379 6.2:-87789437 MS.gene66384:CDS
GTATATAAGTCTGTCTTCCA+TGG 0.532501 6.2:+87788007 None:intergenic
TCGAGGTAAAACGGAGACTC+CGG 0.535309 6.2:+87788707 None:intergenic
GACTTGACCTCCACAAAACT+AGG 0.538080 6.2:+87787388 None:intergenic
AAGCGTGGAGGAACAATCCT+TGG 0.541606 6.2:-87789824 MS.gene66384:CDS
CGCAGGACTGGTACCGCAAG+CGG 0.544238 6.2:+87787256 None:intergenic
TCTGACGCGGTCCAGCGCGC+CGG 0.545765 6.2:+87790242 None:intergenic
AAGGTTATTACTGGTCCTGC+TGG 0.547259 6.2:-87791426 MS.gene66384:CDS
CTTATCACAGTGTTGAGTCC+AGG 0.551757 6.2:+87790065 None:intergenic
TTGTTCACAAAGATAGTCCA+AGG 0.554381 6.2:-87790276 MS.gene66384:CDS
AACCATTGATAACGATATCC+CGG 0.554447 6.2:-87789398 MS.gene66384:intron
ACATGTGGAGGTCTATGTCC+TGG 0.555069 6.2:-87790083 MS.gene66384:CDS
TATCGGTGTTGTCAAGCTGA+TGG 0.557994 6.2:-87789157 MS.gene66384:CDS
AAAGTCCACCAGGACCTTCG+AGG 0.566693 6.2:+87788690 None:intergenic
TGGAGGAGATGGAACTCAGA+GGG 0.567340 6.2:-87789648 MS.gene66384:CDS
GGTTACACTGGCTACACAAG+TGG 0.567624 6.2:-87788036 MS.gene66384:CDS
ATCGGTGTTGTCAAGCTGAT+GGG 0.572521 6.2:-87789156 MS.gene66384:CDS
ACAGCTCGGATCATATAGGT+TGG 0.574984 6.2:+87788129 None:intergenic
ATGGTTATCGTGATTGCTGA+AGG 0.577915 6.2:-87788629 MS.gene66384:CDS
ATCGTGATTGCTGAAGGAGC+GGG 0.579543 6.2:-87788623 MS.gene66384:CDS
CGGATATCCCGCCCGTACGC+AGG 0.580125 6.2:+87787239 None:intergenic
TAAGCAGGGTTGTCTTGCAA+AGG 0.591067 6.2:+87790920 None:intergenic
GTACCAGTCCTGCGTACGGG+CGG 0.595874 6.2:-87787247 MS.gene66384:CDS
TACACAAGTGGACTTGTCCA+TGG 0.597437 6.2:-87788024 MS.gene66384:CDS
AAGTGCTGTTCATGGAGCAA+TGG 0.598362 6.2:-87788061 MS.gene66384:CDS
TACCAGTCCTGCGTACGGGC+GGG 0.598581 6.2:-87787246 MS.gene66384:CDS
CAAGCTGCAATTGTTACATG+TGG 0.599033 6.2:-87790098 MS.gene66384:CDS
GCTGCAATTGTTACATGTGG+AGG 0.602516 6.2:-87790095 MS.gene66384:CDS
TGATGACACAGTTCCTCAGA+AGG 0.603083 6.2:-87790766 MS.gene66384:intron
GTCCACCTCGCGAAGTACCA+AGG 0.610530 6.2:+87789807 None:intergenic
ATATATAGATAGAAGGCTCA+AGG 0.612517 6.2:-87788663 MS.gene66384:CDS
AAGCATTACTTGGAACAGCT+CGG 0.613912 6.2:+87788115 None:intergenic
TCTTCAAGTACATAACCAGC+AGG 0.613917 6.2:+87791411 None:intergenic
GTTAATAACATACACAAGCG+TGG 0.614012 6.2:-87789839 MS.gene66384:CDS
ATCCTTGGTACTTCGCGAGG+TGG 0.614536 6.2:-87789809 MS.gene66384:CDS
AACAGCAGTGTCAAAGCCAA+AGG 0.615228 6.2:+87789239 None:intergenic
ACTTTACAACTGAGTAAGCA+GGG 0.616682 6.2:+87790906 None:intergenic
GACTCGAGTTCTTGGAATCG+AGG 0.621298 6.2:-87790006 MS.gene66384:intron
TTGTGATAACTGATAGAATG+TGG 0.624098 6.2:-87787438 MS.gene66384:CDS
TATCGTGATTGCTGAAGGAG+CGG 0.625767 6.2:-87788624 MS.gene66384:CDS
ACAATCCTTGGTACTTCGCG+AGG 0.630136 6.2:-87789812 MS.gene66384:CDS
GGGATGCTTAGCTCCGCTTG+CGG 0.639885 6.2:-87787269 MS.gene66384:CDS
ATATTTGAGAGTAATGGGCA+GGG 0.640395 6.2:+87788256 None:intergenic
GAGCTAAGCATCCCAAATTG+CGG 0.641607 6.2:+87787278 None:intergenic
GCTCAAGGAAAATGGCCACA+TGG 0.646150 6.2:-87788648 MS.gene66384:CDS
ATACAGGAAGTCAGAAGGCG+TGG 0.646172 6.2:-87789451 MS.gene66384:intron
TATCGATACAGGAAGTCAGA+AGG 0.648533 6.2:-87789456 MS.gene66384:intron
ATATATTCATAAAGTCCACC+AGG 0.652328 6.2:+87788680 None:intergenic
ACATTGTTCAGAAGACACTT+CGG 0.654973 6.2:-87787314 MS.gene66384:CDS
TGTTCACAAAGATAGTCCAA+GGG 0.663549 6.2:-87790275 MS.gene66384:CDS
TCATTGGACGAATTACCAGA+TGG 0.665549 6.2:-87787337 MS.gene66384:CDS
GTTGACAGTATTCAAGATCG+CGG 0.673963 6.2:-87789767 MS.gene66384:CDS
AAGCTGATGGGTCGATACAG+CGG 0.679140 6.2:-87789144 MS.gene66384:intron
TGTGATAACTGATAGAATGT+GGG 0.690759 6.2:-87787437 MS.gene66384:CDS
TAACTGATAGAATGTGGGCA+AGG 0.700292 6.2:-87787432 MS.gene66384:CDS
TTGGAGGAGATGGAACTCAG+AGG 0.707119 6.2:-87789649 MS.gene66384:CDS
GTTCACAAAGATAGTCCAAG+GGG 0.722966 6.2:-87790274 MS.gene66384:CDS
GGAGGAGATGGAACTCAGAG+GGG 0.731781 6.2:-87789647 MS.gene66384:CDS
GGAATGTAATCAGACAAGTG+AGG 0.735608 6.2:+87791384 None:intergenic
AATAACATACACAAGCGTGG+AGG 0.738854 6.2:-87789836 MS.gene66384:CDS
AGAAAACATACCTTCTGACG+CGG 0.746019 6.2:+87790229 None:intergenic
CAGCAATCACGATAACCATG+TGG 0.747442 6.2:+87788633 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATTTACTGT+CGG + chr6.2:87787474-87787493 None:intergenic 10.0%
!!! TTTTTTATGTAATTTTCAAT+TGG - chr6.2:87787946-87787965 MS.gene66384:intron 10.0%
!! ATTATTAAGACAAAAACTAA+AGG + chr6.2:87787416-87787435 None:intergenic 15.0%
!! TATTAATTATGTTGGATTAT+TGG - chr6.2:87787489-87787508 MS.gene66384:intron 15.0%
!! TTTATGAATATATAGATAGA+AGG - chr6.2:87790005-87790024 MS.gene66384:intron 15.0%
!!! ATTTCTTTAATTTGGATTAA+AGG + chr6.2:87788033-87788052 None:intergenic 15.0%
!!! GAAAGTTTTATTCAAATTAT+CGG + chr6.2:87789076-87789095 None:intergenic 15.0%
!!! TAATTTTCAATTGGTTATTA+TGG - chr6.2:87787955-87787974 MS.gene66384:intron 15.0%
!!! TTTCTTTAATTTGGATTAAA+GGG + chr6.2:87788032-87788051 None:intergenic 15.0%
!!! TTTTAGTGAAATTTATATCT+TGG - chr6.2:87787635-87787654 MS.gene66384:intron 15.0%
!!! TTTTTTTTGTTAATTGTACT+TGG - chr6.2:87787709-87787728 MS.gene66384:intron 15.0%
!! AAAAACAAGATATCATCTTT+AGG + chr6.2:87789629-87789648 None:intergenic 20.0%
!! AATAAAACTTTCAAACTTGT+TGG - chr6.2:87789084-87789103 MS.gene66384:intron 20.0%
!! ATGAGTCAATTTATTGATAT+TGG - chr6.2:87789649-87789668 MS.gene66384:CDS 20.0%
!! CAAGTACAATTTCTTTAATT+TGG + chr6.2:87788041-87788060 None:intergenic 20.0%
!! TAAATAGCATTATGACTTTA+TGG - chr6.2:87790734-87790753 MS.gene66384:intron 20.0%
!!! TATCTTGTAATTACTTTTGA+AGG - chr6.2:87790337-87790356 MS.gene66384:intron 20.0%
!!! TCAGAATTTGGTTTTTTTTT+CGG - chr6.2:87791027-87791046 MS.gene66384:intron 20.0%
!!! TGCATGAAAATTTTACTATA+TGG - chr6.2:87789125-87789144 MS.gene66384:intron 20.0%
! AAAAAAAAAACTGTGATAGC+AGG + chr6.2:87788720-87788739 None:intergenic 25.0%
! AAATTCAAGTAACATTGTCT+TGG + chr6.2:87788329-87788348 None:intergenic 25.0%
! AATTTATATCTTGGATTGCA+TGG - chr6.2:87787644-87787663 MS.gene66384:intron 25.0%
! ACAGATCAGATATGAAAAAT+TGG - chr6.2:87787536-87787555 MS.gene66384:intron 25.0%
! ACCTATATATTTGAGAGTAA+TGG + chr6.2:87790428-87790447 None:intergenic 25.0%
! ATTACAAGATAGCGAAAAAT+TGG + chr6.2:87790328-87790347 None:intergenic 25.0%
! CACAATGTGCAAAAAAAAAA+CGG + chr6.2:87789308-87789327 None:intergenic 25.0%
! CCTATATATTTGAGAGTAAT+GGG + chr6.2:87790427-87790446 None:intergenic 25.0%
! GAATGAATCAATATTGTCAA+TGG + chr6.2:87789887-87789906 None:intergenic 25.0%
! TACATCTTCAATAACAAGTA+GGG - chr6.2:87788003-87788022 MS.gene66384:CDS 25.0%
! TCTAATGAACTTACATAGAA+AGG + chr6.2:87790693-87790712 None:intergenic 25.0%
! TGTATGTTATTAACACTTGA+AGG + chr6.2:87788830-87788849 None:intergenic 25.0%
! TTACATCTTCAATAACAAGT+AGG - chr6.2:87788002-87788021 MS.gene66384:CDS 25.0%
!! AAATGGATTCAAGTTATATG+AGG + chr6.2:87789340-87789359 None:intergenic 25.0%
!! AACGATGTTTTGTACTAAAT+AGG + chr6.2:87789790-87789809 None:intergenic 25.0%
!! ATATCGTTATCAATGGTTTT+CGG + chr6.2:87789275-87789294 None:intergenic 25.0%
!! ATGGATATCTCAAAGTATTA+AGG - chr6.2:87790156-87790175 MS.gene66384:intron 25.0%
!! CAATGTAGTCTTTTAAATTG+CGG - chr6.2:87789708-87789727 MS.gene66384:intron 25.0%
!! TGATTTTCTCAAATTATCAG+CGG - chr6.2:87788236-87788255 MS.gene66384:intron 25.0%
!! TTAATATCGCTTTGAATTTC+AGG - chr6.2:87788994-87789013 MS.gene66384:intron 25.0%
!!! AGAAAATGTTTTGATGTGAA+GGG - chr6.2:87788761-87788780 MS.gene66384:CDS 25.0%
!!! ATTGTTATTTGTTCTGTTTG+CGG - chr6.2:87790183-87790202 MS.gene66384:intron 25.0%
!!! ATTTATTGCCCTTTTGAAAT+TGG - chr6.2:87788522-87788541 MS.gene66384:CDS 25.0%
!!! ATTTGGTTTTTTTTTCGGTA+CGG - chr6.2:87791032-87791051 MS.gene66384:intron 25.0%
!!! CATTAAAATTTTGATCTTCC+AGG - chr6.2:87790375-87790394 MS.gene66384:intron 25.0%
!!! GAAAGTTTTGAAAATGGTAT+CGG - chr6.2:87789501-87789520 MS.gene66384:intron 25.0%
!!! GAATTTCAGGTTTATATCAT+TGG - chr6.2:87789007-87789026 MS.gene66384:intron 25.0%
!!! GCTATCACAGTTTTTTTTTT+TGG - chr6.2:87788720-87788739 MS.gene66384:CDS 25.0%
!!! GTTTTTCTCTCTTATTTGTT+TGG - chr6.2:87787798-87787817 MS.gene66384:intron 25.0%
!!! TATTTAGCACATTTTGGTTT+TGG - chr6.2:87791136-87791155 MS.gene66384:intron 25.0%
!!! TTCACTTTTTTCACATTTTC+AGG - chr6.2:87787869-87787888 MS.gene66384:intron 25.0%
!!! TTTTAAAGCGTACAAATATG+CGG + chr6.2:87790898-87790917 None:intergenic 25.0%
AAATAGAGCATAATCGGTAT+TGG + chr6.2:87790297-87790316 None:intergenic 30.0%
AACAAACTTCTTCAAGATGT+TGG - chr6.2:87790130-87790149 MS.gene66384:intron 30.0%
ACAAACTTCTTCAAGATGTT+GGG - chr6.2:87790131-87790150 MS.gene66384:intron 30.0%
ACAGACACACACAAAAAAAT+CGG + chr6.2:87788966-87788985 None:intergenic 30.0%
AGCATATATGAAGCTATGTT+TGG + chr6.2:87789682-87789701 None:intergenic 30.0%
ATATATAGATAGAAGGCTCA+AGG - chr6.2:87790012-87790031 MS.gene66384:CDS 30.0%
ATATATTCATAAAGTCCACC+AGG + chr6.2:87789998-87790017 None:intergenic 30.0%
CCCATTACTCTCAAATATAT+AGG - chr6.2:87790424-87790443 MS.gene66384:intron 30.0%
CGGAAAAAATAGAGCATAAT+CGG + chr6.2:87790303-87790322 None:intergenic 30.0%
CTGAATGTCCAATTTCAAAA+GGG + chr6.2:87788533-87788552 None:intergenic 30.0%
GAACTGTTAGGACTAAAAAA+GGG - chr6.2:87790852-87790871 MS.gene66384:intron 30.0%
GAGAAAATCACATAATTCAG+TGG + chr6.2:87788226-87788245 None:intergenic 30.0%
TACTCATCAGCATTACTAAT+TGG - chr6.2:87789365-87789384 MS.gene66384:intron 30.0%
TCAAACAGAATTGAACTGTT+AGG - chr6.2:87790840-87790859 MS.gene66384:intron 30.0%
TGAAAATAACCAAACTCTGA+CGG - chr6.2:87790943-87790962 MS.gene66384:intron 30.0%
TGAACTGTTAGGACTAAAAA+AGG - chr6.2:87790851-87790870 MS.gene66384:intron 30.0%
TGAAGATGTTTATGTGAAGT+TGG - chr6.2:87788093-87788112 MS.gene66384:CDS 30.0%
TGTGATAACTGATAGAATGT+GGG - chr6.2:87791238-87791257 MS.gene66384:intron 30.0%
TTACCATGAAAATGCTATCT+AGG + chr6.2:87791097-87791116 None:intergenic 30.0%
TTCAACTTGATTATCGATAC+AGG - chr6.2:87789208-87789227 MS.gene66384:CDS 30.0%
TTCAGTGGAATTATATGTGT+CGG + chr6.2:87788211-87788230 None:intergenic 30.0%
TTGTGATAACTGATAGAATG+TGG - chr6.2:87791237-87791256 MS.gene66384:intron 30.0%
! AAAAAAAAAACGGACTTACC+GGG + chr6.2:87789298-87789317 None:intergenic 30.0%
! ACATCTTCATCACAAGATTT+TGG + chr6.2:87788082-87788101 None:intergenic 30.0%
! CAAAAAAAAAACGGACTTAC+CGG + chr6.2:87789299-87789318 None:intergenic 30.0%
! CATCAGTATTTAGCACATTT+TGG - chr6.2:87791130-87791149 MS.gene66384:intron 30.0%
! TATCGTTATCAATGGTTTTC+GGG + chr6.2:87789274-87789293 None:intergenic 30.0%
! TTTAAAGCGTACAAATATGC+GGG + chr6.2:87790897-87790916 None:intergenic 30.0%
! TTTTCTCAAGCTACTATTCA+TGG - chr6.2:87787357-87787376 MS.gene66384:CDS 30.0%
!! AACTTGTTGGTTTATGGTTT+CGG - chr6.2:87789097-87789116 MS.gene66384:intron 30.0%
!! ACAATATTGATTCATTCTGC+AGG - chr6.2:87789890-87789909 MS.gene66384:CDS 30.0%
!! ACCAATAAACTGAGTATTGA+AGG + chr6.2:87789581-87789600 None:intergenic 30.0%
!! CTTTCAAACTTGTTGGTTTA+TGG - chr6.2:87789091-87789110 MS.gene66384:intron 30.0%
!! TTTCAGGTTTATATCATTGG+AGG - chr6.2:87789010-87789029 MS.gene66384:intron 30.0%
!!! AACAAATCAACCTAGTTTTG+TGG - chr6.2:87791277-87791296 MS.gene66384:intron 30.0%
!!! CGTTTTTTTTTTGCACATTG+TGG - chr6.2:87789306-87789325 MS.gene66384:intron 30.0%
!!! GAAGCTGAAAGTTTTGAAAA+TGG - chr6.2:87789495-87789514 MS.gene66384:intron 30.0%
!!! GAGAAAATGTTTTGATGTGA+AGG - chr6.2:87788760-87788779 MS.gene66384:CDS 30.0%
!!! TTTAACGGTTCGGTTTTTTA+TGG - chr6.2:87791060-87791079 MS.gene66384:intron 30.0%
AAGATAGCGAAAAATTGGCA+CGG + chr6.2:87790323-87790342 None:intergenic 35.0%
ACATTGTTCAGAAGACACTT+CGG - chr6.2:87791361-87791380 MS.gene66384:intron 35.0%
ACCGAACCATTGTAACAATT+CGG + chr6.2:87790790-87790809 None:intergenic 35.0%
ACTGAACCTAAGGTTATTAC+TGG - chr6.2:87787240-87787259 MS.gene66384:CDS 35.0%
ACTGATCCGAATTGTTACAA+TGG - chr6.2:87790781-87790800 MS.gene66384:CDS 35.0%
ACTTTACAACTGAGTAAGCA+GGG + chr6.2:87787772-87787791 None:intergenic 35.0%
AGATGTTTATGTGAAGTTGG+TGG - chr6.2:87788096-87788115 MS.gene66384:CDS 35.0%
AGTGTACTGTTGTCAAATAG+CGG + chr6.2:87790248-87790267 None:intergenic 35.0%
ATCATCTTTAGGCCTATTGA+AGG + chr6.2:87789618-87789637 None:intergenic 35.0%
ATTCTGTGATCACCTTCAAT+AGG - chr6.2:87789603-87789622 MS.gene66384:intron 35.0%
CAAAAAAGGCGAAAACTCAT+TGG - chr6.2:87791322-87791341 MS.gene66384:intron 35.0%
CAAAAAATACCAACCTTCTG+AGG + chr6.2:87787925-87787944 None:intergenic 35.0%
CAGATTATTGACAAGTCCTT+TGG - chr6.2:87789420-87789439 MS.gene66384:CDS 35.0%
CCTGAATGTCCAATTTCAAA+AGG + chr6.2:87788534-87788553 None:intergenic 35.0%
CTTTATGGTTCAGTTCAAGA+AGG - chr6.2:87790749-87790768 MS.gene66384:intron 35.0%
GAGACGAATCATTAACAGTT+CGG + chr6.2:87790822-87790841 None:intergenic 35.0%
GAGGTACATATCGATCTTTA+TGG - chr6.2:87788688-87788707 MS.gene66384:CDS 35.0%
GCCTTCAATACTCAGTTTAT+TGG - chr6.2:87789577-87789596 MS.gene66384:intron 35.0%
GTATATAAGTCTGTCTTCCA+TGG + chr6.2:87790671-87790690 None:intergenic 35.0%
GTTAATAACATACACAAGCG+TGG - chr6.2:87788836-87788855 MS.gene66384:intron 35.0%
GTTTATATCATTGGAGGAGA+TGG - chr6.2:87789016-87789035 MS.gene66384:intron 35.0%
TAATTGCAACCTATGAAGCA+TGG - chr6.2:87788127-87788146 MS.gene66384:CDS 35.0%
TCCGAATTGTTACAATGGTT+CGG - chr6.2:87790786-87790805 MS.gene66384:CDS 35.0%
TCTTCCGATGAAGACAAAAA+AGG - chr6.2:87791308-87791327 MS.gene66384:intron 35.0%
TGCTGATGAGTAGTAAGAAA+TGG + chr6.2:87789357-87789376 None:intergenic 35.0%
TGTAGCTTACACCATATGTA+TGG - chr6.2:87788643-87788662 MS.gene66384:CDS 35.0%
TGTTCACAAAGATAGTCCAA+GGG - chr6.2:87788400-87788419 MS.gene66384:intron 35.0%
TTATATCTTGGATTGCATGG+TGG - chr6.2:87787647-87787666 MS.gene66384:intron 35.0%
TTGTTCACAAAGATAGTCCA+AGG - chr6.2:87788399-87788418 MS.gene66384:intron 35.0%
! ACTCCTAGATAGCATTTTCA+TGG - chr6.2:87791091-87791110 MS.gene66384:intron 35.0%
! AGTACACTGATTGATACAAG+TGG - chr6.2:87790260-87790279 MS.gene66384:CDS 35.0%
! ATACAACACTGGTACTCTTT+TGG - chr6.2:87791159-87791178 MS.gene66384:intron 35.0%
! ATTTTCAGTGTGGTTCAGTT+CGG + chr6.2:87790930-87790949 None:intergenic 35.0%
! GATTCAAGTTATATGAGGTG+TGG + chr6.2:87789335-87789354 None:intergenic 35.0%
! GATTTTGTTCTGACTTTGAC+AGG - chr6.2:87788373-87788392 MS.gene66384:intron 35.0%
! TTCGGTACGGTTCATTTTAA+CGG - chr6.2:87791045-87791064 MS.gene66384:intron 35.0%
! TTGTACTAAATAGGTATCGC+AGG + chr6.2:87789781-87789800 None:intergenic 35.0%
!! AACCATTGATAACGATATCC+CGG - chr6.2:87789277-87789296 MS.gene66384:intron 35.0%
!! ACATTGTCAGAAGCATTACT+TGG + chr6.2:87790573-87790592 None:intergenic 35.0%
!! ACTTGTTGGTTTATGGTTTC+GGG - chr6.2:87789098-87789117 MS.gene66384:intron 35.0%
!! ATATTTGAGAGTAATGGGCA+GGG + chr6.2:87790422-87790441 None:intergenic 35.0%
!! ATTCTTTCAGTATCGATTGC+TGG + chr6.2:87790498-87790517 None:intergenic 35.0%
!! GAGTTTGGTTATTTTCAGTG+TGG + chr6.2:87790940-87790959 None:intergenic 35.0%
!! TACGGTTCATTTTAACGGTT+CGG - chr6.2:87791050-87791069 MS.gene66384:intron 35.0%
!! TATATTTGAGAGTAATGGGC+AGG + chr6.2:87790423-87790442 None:intergenic 35.0%
!! TGAAGGCATTATAAACACCT+AGG + chr6.2:87789564-87789583 None:intergenic 35.0%
!!! AAATCAACCTAGTTTTGTGG+AGG - chr6.2:87791280-87791299 MS.gene66384:intron 35.0%
!!! AAATGTTTTGATGTGAAGGG+AGG - chr6.2:87788764-87788783 MS.gene66384:CDS 35.0%
!!! CCTTTTGAAATTGGACATTC+AGG - chr6.2:87788531-87788550 MS.gene66384:CDS 35.0%
!!! TTCGCCTTTTTTGTCTTCAT+CGG + chr6.2:87791315-87791334 None:intergenic 35.0%
!!! TTTGGTTTTGGATACAACAC+TGG - chr6.2:87791148-87791167 MS.gene66384:intron 35.0%
AAGCATTACTTGGAACAGCT+CGG + chr6.2:87790563-87790582 None:intergenic 40.0%
AATAACATACACAAGCGTGG+AGG - chr6.2:87788839-87788858 MS.gene66384:intron 40.0%
AGAAAACATACCTTCTGACG+CGG + chr6.2:87788449-87788468 None:intergenic 40.0%
ATATTGTCAATGGCAGATCG+CGG + chr6.2:87789877-87789896 None:intergenic 40.0%
ATGAAGCACAGATACGAACA+CGG + chr6.2:87788297-87788316 None:intergenic 40.0%
ATGGTTATCGTGATTGCTGA+AGG - chr6.2:87790046-87790065 MS.gene66384:CDS 40.0%
CAAGCTGCAATTGTTACATG+TGG - chr6.2:87788577-87788596 MS.gene66384:CDS 40.0%
CACAATTGTCGCTCAGAATT+TGG - chr6.2:87791015-87791034 MS.gene66384:intron 40.0%
CACTTTACAACTGAGTAAGC+AGG + chr6.2:87787773-87787792 None:intergenic 40.0%
GATAGAAGGCTCAAGGAAAA+TGG - chr6.2:87790019-87790038 MS.gene66384:CDS 40.0%
GATGAAATCAGCCGCAATTT+GGG - chr6.2:87791386-87791405 MS.gene66384:CDS 40.0%
GGAATGTAATCAGACAAGTG+AGG + chr6.2:87787294-87787313 None:intergenic 40.0%
GTGAATTATCCGTCAGAGTT+TGG + chr6.2:87790955-87790974 None:intergenic 40.0%
GTTCACAAAGATAGTCCAAG+GGG - chr6.2:87788401-87788420 MS.gene66384:intron 40.0%
GTTGACAGTATTCAAGATCG+CGG - chr6.2:87788908-87788927 MS.gene66384:intron 40.0%
TAACTGATAGAATGTGGGCA+AGG - chr6.2:87791243-87791262 MS.gene66384:intron 40.0%
TACCGGGATATCGTTATCAA+TGG + chr6.2:87789282-87789301 None:intergenic 40.0%
TATCGATACAGGAAGTCAGA+AGG - chr6.2:87789219-87789238 MS.gene66384:CDS 40.0%
TATGAAGCATGGACACTCAT+CGG - chr6.2:87788138-87788157 MS.gene66384:intron 40.0%
TCATTGGACGAATTACCAGA+TGG - chr6.2:87791338-87791357 MS.gene66384:intron 40.0%
TCTCTTTGGCAAAATGATCC+TGG + chr6.2:87790396-87790415 None:intergenic 40.0%
TCTTCAAGTACATAACCAGC+AGG + chr6.2:87787267-87787286 None:intergenic 40.0%
TCTTCTGAACAATGTCCATC+TGG + chr6.2:87791356-87791375 None:intergenic 40.0%
TGATGAAATCAGCCGCAATT+TGG - chr6.2:87791385-87791404 MS.gene66384:CDS 40.0%
TGATGTGAAGGGAGGATATA+GGG - chr6.2:87788772-87788791 MS.gene66384:intron 40.0%
TGGACTCAACACTGTGATAA+GGG - chr6.2:87788612-87788631 MS.gene66384:CDS 40.0%
TTCTTCAAGATGTTGGGCTA+TGG - chr6.2:87790137-87790156 MS.gene66384:intron 40.0%
TTGATGTGAAGGGAGGATAT+AGG - chr6.2:87788771-87788790 MS.gene66384:intron 40.0%
! GGAATTATATGTGTCGGTGT+CGG + chr6.2:87788205-87788224 None:intergenic 40.0%
! GTCGGTGTCTATATCTTGTT+TGG - chr6.2:87788268-87788287 MS.gene66384:CDS 40.0%
! TGTTGACTGTTGCTTGATTC+CGG - chr6.2:87789949-87789968 MS.gene66384:intron 40.0%
AACAGCAGTGTCAAAGCCAA+AGG + chr6.2:87789439-87789458 None:intergenic 45.0%
AAGGCGTGGTCTCAAATGTT+CGG - chr6.2:87789238-87789257 MS.gene66384:CDS 45.0%
AAGGTTATTACTGGTCCTGC+TGG - chr6.2:87787249-87787268 MS.gene66384:CDS 45.0%
ACAGCTCGGATCATATAGGT+TGG + chr6.2:87790549-87790568 None:intergenic 45.0%
AGAGAGAGAGAGAGACATAC+TGG + chr6.2:87787324-87787343 None:intergenic 45.0%
AGGACTAAAAAAGGGCAGCT+CGG - chr6.2:87790860-87790879 MS.gene66384:intron 45.0%
CAGCAATCACGATAACCATG+TGG + chr6.2:87790045-87790064 None:intergenic 45.0%
CTGGACTCAACACTGTGATA+AGG - chr6.2:87788611-87788630 MS.gene66384:CDS 45.0%
GACTTGACCTCCACAAAACT+AGG + chr6.2:87791290-87791309 None:intergenic 45.0%
GAGAGACATACTGGAAGATC+AGG + chr6.2:87787315-87787334 None:intergenic 45.0%
GAGCTAAGCATCCCAAATTG+CGG + chr6.2:87791400-87791419 None:intergenic 45.0%
GATACAGCGGTAAGTTTCCT+AGG - chr6.2:87789544-87789563 MS.gene66384:intron 45.0%
GATGAGTGTCCATGCTTCAT+AGG + chr6.2:87788139-87788158 None:intergenic 45.0%
GATGTGAAGGGAGGATATAG+GGG - chr6.2:87788773-87788792 MS.gene66384:intron 45.0%
GCAGGACCAGTAATAACCTT+AGG + chr6.2:87787249-87787268 None:intergenic 45.0%
GCTGCAATTGTTACATGTGG+AGG - chr6.2:87788580-87788599 MS.gene66384:CDS 45.0%
GGGTTGTCTTGCAAAGGATT+AGG + chr6.2:87787752-87787771 None:intergenic 45.0%
GGTCTCAAATGTTCGGTTGT+AGG - chr6.2:87789245-87789264 MS.gene66384:CDS 45.0%
TAAGCAGGGTTGTCTTGCAA+AGG + chr6.2:87787758-87787777 None:intergenic 45.0%
TATCGTGATTGCTGAAGGAG+CGG - chr6.2:87790051-87790070 MS.gene66384:CDS 45.0%
TCAAGATCGCGGAATCAATC+AGG - chr6.2:87788919-87788938 MS.gene66384:intron 45.0%
TCTGCAATCTGGCAAGAAAC+AGG - chr6.2:87790096-87790115 MS.gene66384:CDS 45.0%
TGATGACACAGTTCCTCAGA+AGG - chr6.2:87787909-87787928 MS.gene66384:intron 45.0%
TGGAACAGCTCGGATCATAT+AGG + chr6.2:87790553-87790572 None:intergenic 45.0%
! AAGTGCTGTTCATGGAGCAA+TGG - chr6.2:87790614-87790633 MS.gene66384:intron 45.0%
! CTTATCACAGTGTTGAGTCC+AGG + chr6.2:87788613-87788632 None:intergenic 45.0%
! GGGTGCATCTGTAATTTTCG+AGG - chr6.2:87789048-87789067 MS.gene66384:intron 45.0%
! TACACAAGTGGACTTGTCCA+TGG - chr6.2:87790651-87790670 MS.gene66384:intron 45.0%
!! ATCGGTGTTGTCAAGCTGAT+GGG - chr6.2:87789519-87789538 MS.gene66384:intron 45.0%
!! CTTGCTCAAAGTGCTGTTCA+TGG - chr6.2:87790606-87790625 MS.gene66384:intron 45.0%
!! TATCGGTGTTGTCAAGCTGA+TGG - chr6.2:87789518-87789537 MS.gene66384:intron 45.0%
!! ATTATTATTATTAATTATGT+TGG - chr6.2:87787481-87787500 MS.gene66384:intron 5.0%
!!! ATAAATTTTTCTATTTTTTT+GGG - chr6.2:87787590-87787609 MS.gene66384:intron 5.0%
!!! TATAAATTTTTCTATTTTTT+TGG - chr6.2:87787589-87787608 MS.gene66384:intron 5.0%
AAGCGTGGAGGAACAATCCT+TGG - chr6.2:87788851-87788870 MS.gene66384:intron 50.0%
AATGGGCAGGGTCTTCTCTT+TGG + chr6.2:87790410-87790429 None:intergenic 50.0%
ACAATCCTTGGTACTTCGCG+AGG - chr6.2:87788863-87788882 MS.gene66384:intron 50.0%
ACATGTGGAGGTCTATGTCC+TGG - chr6.2:87788592-87788611 MS.gene66384:CDS 50.0%
ATACAGGAAGTCAGAAGGCG+TGG - chr6.2:87789224-87789243 MS.gene66384:CDS 50.0%
ATCGTGATTGCTGAAGGAGC+GGG - chr6.2:87790052-87790071 MS.gene66384:CDS 50.0%
CCAGGACCTTCGAGGTAAAA+CGG + chr6.2:87789980-87789999 None:intergenic 50.0%
CTCGAGTCACGCCATACATA+TGG + chr6.2:87788657-87788676 None:intergenic 50.0%
CTTACCGAGAGTCTGCAATC+TGG - chr6.2:87790085-87790104 MS.gene66384:CDS 50.0%
CTTGCCAGATTGCAGACTCT+CGG + chr6.2:87790092-87790111 None:intergenic 50.0%
CTTTGACACTGCTGTTGAGG+AGG - chr6.2:87789443-87789462 MS.gene66384:CDS 50.0%
GACACAGTTCCTCAGAAGGT+TGG - chr6.2:87787913-87787932 MS.gene66384:intron 50.0%
GACTCGAGTTCTTGGAATCG+AGG - chr6.2:87788669-87788688 MS.gene66384:CDS 50.0%
GAGCGACAATTGTGAGAGAC+AGG + chr6.2:87791009-87791028 None:intergenic 50.0%
GATTAGGCGTGTCCAAGTGT+CGG - chr6.2:87788160-87788179 MS.gene66384:intron 50.0%
GCATGGACACTCATCGGATT+AGG - chr6.2:87788144-87788163 MS.gene66384:intron 50.0%
GCTCAAGGAAAATGGCCACA+TGG - chr6.2:87790027-87790046 MS.gene66384:CDS 50.0%
GGCAAGAAACAGGATGCTTC+TGG - chr6.2:87790106-87790125 MS.gene66384:CDS 50.0%
TATGGCGTGACTCGAGTTCT+TGG - chr6.2:87788661-87788680 MS.gene66384:CDS 50.0%
TCGAGGTAAAACGGAGACTC+CGG + chr6.2:87789971-87789990 None:intergenic 50.0%
TGGAGGAGATGGAACTCAGA+GGG - chr6.2:87789027-87789046 MS.gene66384:intron 50.0%
TTGGAGGAGATGGAACTCAG+AGG - chr6.2:87789026-87789045 MS.gene66384:intron 50.0%
! AAGCTGATGGGTCGATACAG+CGG - chr6.2:87789531-87789550 MS.gene66384:intron 50.0%
! GAGTCTCCGTTTTACCTCGA+AGG - chr6.2:87789971-87789990 MS.gene66384:intron 50.0%
! GGTTACACTGGCTACACAAG+TGG - chr6.2:87790639-87790658 MS.gene66384:intron 50.0%
! GTCCAAGGGGAGTACATTTC+CGG - chr6.2:87788414-87788433 MS.gene66384:intron 50.0%
! TATCAGCGGTGTCAACGTGT+CGG - chr6.2:87788250-87788269 MS.gene66384:intron 50.0%
! TTTTACCTCGAAGGTCCTGG+TGG - chr6.2:87789980-87789999 MS.gene66384:intron 50.0%
!! ATATGTGTCGGTGTCGGTGT+CGG + chr6.2:87788199-87788218 None:intergenic 50.0%
!! TGGCTTTGACACTGCTGTTG+AGG - chr6.2:87789440-87789459 MS.gene66384:CDS 50.0%
AAAGTCCACCAGGACCTTCG+AGG + chr6.2:87789988-87790007 None:intergenic 55.0%
ATCCTTGGTACTTCGCGAGG+TGG - chr6.2:87788866-87788885 MS.gene66384:intron 55.0%
CAAGACACGTGTCCGACACT+TGG + chr6.2:87788175-87788194 None:intergenic 55.0%
GCTGTTCATGGAGCAATGGC+AGG - chr6.2:87790618-87790637 MS.gene66384:intron 55.0%
GGAGCAATGGCAGGTTACAC+TGG - chr6.2:87790627-87790646 MS.gene66384:intron 55.0%
GGAGGAGATGGAACTCAGAG+GGG - chr6.2:87789028-87789047 MS.gene66384:intron 55.0%
! CCGTTTTACCTCGAAGGTCC+TGG - chr6.2:87789977-87789996 MS.gene66384:intron 55.0%
CGCCGGAAATGTACTCCCCT+TGG + chr6.2:87788419-87788438 None:intergenic 60.0%
GATTGCTGAAGGAGCGGGAC+AGG - chr6.2:87790057-87790076 MS.gene66384:CDS 60.0%
GGGATGCTTAGCTCCGCTTG+CGG - chr6.2:87791406-87791425 MS.gene66384:CDS 60.0%
TGCGGTACCAGTCCTGCGTA+CGG - chr6.2:87791424-87791443 MS.gene66384:CDS 60.0%
! GTCCACCTCGCGAAGTACCA+AGG + chr6.2:87788871-87788890 None:intergenic 60.0%
CTGCGTACGGGCGGGATATC+CGG - chr6.2:87791437-87791456 MS.gene66384:CDS 65.0%
GCGGTACCAGTCCTGCGTAC+GGG - chr6.2:87791425-87791444 MS.gene66384:CDS 65.0%
GGAGTACATTTCCGGCGCGC+TGG - chr6.2:87788422-87788441 MS.gene66384:intron 65.0%
GTACCAGTCCTGCGTACGGG+CGG - chr6.2:87791428-87791447 MS.gene66384:CDS 65.0%
TACCAGTCCTGCGTACGGGC+GGG - chr6.2:87791429-87791448 MS.gene66384:CDS 65.0%
! CGCAGGACTGGTACCGCAAG+CGG + chr6.2:87791422-87791441 None:intergenic 65.0%
ATCCCGCCCGTACGCAGGAC+TGG + chr6.2:87791434-87791453 None:intergenic 70.0%
CGGATATCCCGCCCGTACGC+AGG + chr6.2:87791439-87791458 None:intergenic 70.0%
GCGCGCTGGACCGCGTCAGA+AGG - chr6.2:87788436-87788455 MS.gene66384:intron 75.0%
TCTGACGCGGTCCAGCGCGC+CGG + chr6.2:87788436-87788455 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 87787231 87791466 87787231 ID=MS.gene66384
chr6.2 mRNA 87787231 87791466 87787231 ID=MS.gene66384.t1;Parent=MS.gene66384
chr6.2 exon 87791374 87791466 87791374 ID=MS.gene66384.t1.exon1;Parent=MS.gene66384.t1
chr6.2 CDS 87791374 87791466 87791374 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87790908 87790954 87790908 ID=MS.gene66384.t1.exon2;Parent=MS.gene66384.t1
chr6.2 CDS 87790908 87790954 87790908 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87790767 87790806 87790767 ID=MS.gene66384.t1.exon3;Parent=MS.gene66384.t1
chr6.2 CDS 87790767 87790806 87790767 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87790240 87790302 87790240 ID=MS.gene66384.t1.exon4;Parent=MS.gene66384.t1
chr6.2 CDS 87790240 87790302 87790240 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87790007 87790144 87790007 ID=MS.gene66384.t1.exon5;Parent=MS.gene66384.t1
chr6.2 CDS 87790007 87790144 87790007 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87789757 87789915 87789757 ID=MS.gene66384.t1.exon6;Parent=MS.gene66384.t1
chr6.2 CDS 87789757 87789915 87789757 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87789628 87789681 87789628 ID=MS.gene66384.t1.exon7;Parent=MS.gene66384.t1
chr6.2 CDS 87789628 87789681 87789628 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87789399 87789467 87789399 ID=MS.gene66384.t1.exon8;Parent=MS.gene66384.t1
chr6.2 CDS 87789399 87789467 87789399 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87789145 87789274 87789145 ID=MS.gene66384.t1.exon9;Parent=MS.gene66384.t1
chr6.2 CDS 87789145 87789274 87789145 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87788520 87788785 87788520 ID=MS.gene66384.t1.exon10;Parent=MS.gene66384.t1
chr6.2 CDS 87788520 87788785 87788520 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87788252 87788300 87788252 ID=MS.gene66384.t1.exon11;Parent=MS.gene66384.t1
chr6.2 CDS 87788252 87788300 87788252 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87787999 87788153 87787999 ID=MS.gene66384.t1.exon12;Parent=MS.gene66384.t1
chr6.2 CDS 87787999 87788153 87787999 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
chr6.2 exon 87787231 87787485 87787231 ID=MS.gene66384.t1.exon13;Parent=MS.gene66384.t1
chr6.2 CDS 87787231 87787485 87787231 ID=cds.MS.gene66384.t1;Parent=MS.gene66384.t1
Gene Sequence

>MS.gene66384

ATGGGTTTAACTGAACCTAAGGTTATTACTGGTCCTGCTGGTTATGTACTTGAAGATGTTCCTCACTTGTCTGATTACATTCCTGATCTTCCAGTATGTCTCTCTCTCTCTCTCTCTCTCTAGCTTTTTTCTCAAGCTACTATTCATGGTCAATGATTAATCATGTTTAACTTTTTTTTTTTCCTTTAGTTTTTGTCTTAATAATAAAAAAAGATACTTTTAATATTCTTTTTCTTTCTGCCGACAGTAAATTATTATTATTAATTATGTTGGATTATTGGTGTTTTTTGTTTTTTTATCTGTTAACAGATCAGATATGAAAAATTGGTTGTACAACTTTTAATTTTTGTTTTAAGTGTATAAATTTTTCTATTTTTTTGGGATTTTTTTTTTACTTTTATTAATTTTAGTGAAATTTATATCTTGGATTGCATGGTGGAAAAGATTAAAGTTTGCATTTTTTAACATAAAACTTTGCTTTTTTTTGTTAATTGTACTTGGTGTTACTGCAGACATATCCTAATCCTTTGCAAGACAACCCTGCTTACTCAGTTGTAAAGTGAGTTTGTTTTTCTCTCTTATTTGTTTGGTGATTTTGATTTCAATTACTGAATTTCTTTATAATTGATAAGCTGATTTTCACTTTTTTCACATTTTCAGGCAGTATTTTGTGCATGTTGATGACACAGTTCCTCAGAAGGTTGGTATTTTTTGTTTTTTTATGTAATTTTCAATTGGTTATTATGGAATTTGATCTTAATAGCTTTTAATTTACATCTTCAATAACAAGTAGGGACACCCTTTAATCCAAATTAAAGAAATTGTACTTGTATGCATAGAGTTATGATCCAAAATCTTGTGATGAAGATGTTTATGTGAAGTTGGTGGAATGTTGTTAATTGCAACCTATGAAGCATGGACACTCATCGGATTAGGCGTGTCCAAGTGTCGGACACGTGTCTTGTCCGACACCGACACCGACACATATAATTCCACTGAATTATGTGATTTTCTCAAATTATCAGCGGTGTCAACGTGTCGGTGTCTATATCTTGTTTGGTGTCCGTGTTCGTATCTGTGCTTCATAGATTGCAACCAAGACAATGTTACTTGAATTTGCATTTCATTTATTTATTTATTTTGATTTTGTTCTGACTTTGACAGGTTGTTGTTCACAAAGATAGTCCAAGGGGAGTACATTTCCGGCGCGCTGGACCGCGTCAGAAGGTATGTTTTCTAAGCTGTGTGAACTTATTTGTGCAAATTTTAATATATTTTGTGACTTATTTTAATTTATTGCCCTTTTGAAATTGGACATTCAGGTGTATTTTGAATCAGATGAAATTCAAGCTGCAATTGTTACATGTGGAGGTCTATGTCCTGGACTCAACACTGTGATAAGGGAATTAGTTTGTAGCTTACACCATATGTATGGCGTGACTCGAGTTCTTGGAATCGAGGTACATATCGATCTTTATGGAGTTAACCTGCTATCACAGTTTTTTTTTTTGGTCTGCGTTAATTAACTTGAGAAAATGTTTTGATGTGAAGGGAGGATATAGGGGCTTCTACGCTCGCAATACAATCACTTTAACTCCTTCAAGTGTTAATAACATACACAAGCGTGGAGGAACAATCCTTGGTACTTCGCGAGGTGGACACGACACTAATAAGATAGTTGACAGTATTCAAGATCGCGGAATCAATCAGGTCTGTGTTTCTTTCAATTTTACCGATTTTTTTGTGTGTGTCTGTACATTAGATTAATATCGCTTTGAATTTCAGGTTTATATCATTGGAGGAGATGGAACTCAGAGGGGTGCATCTGTAATTTTCGAGGTACCGATAATTTGAATAAAACTTTCAAACTTGTTGGTTTATGGTTTCGGGAATTTGCATGAAAATTTTACTATATGGTCATGTTAAAATTTAAGATATGTGAAACTAGTTACATTGAAGTAGAAGATTTACTAAAAGTTCAACTTGATTATCGATACAGGAAGTCAGAAGGCGTGGTCTCAAATGTTCGGTTGTAGGAATCCCGAAAACCATTGATAACGATATCCCGGTAAGTCCGTTTTTTTTTTGCACATTGTGGTTTCCACACCTCATATAACTTGAATCCATTTCTTACTACTCATCAGCATTACTAATTGGTAAATTTCTTCTACTGTCTCTTTATCGCTTAACAGATTATTGACAAGTCCTTTGGCTTTGACACTGCTGTTGAGGAGGCTCAACGTGCTATAAATGCAGCACATGTTGAAGCTGAAAGTTTTGAAAATGGTATCGGTGTTGTCAAGCTGATGGGTCGATACAGCGGTAAGTTTCCTAGGTGTTTATAATGCCTTCAATACTCAGTTTATTGGTTCATTCTGTGATCACCTTCAATAGGCCTAAAGATGATATCTTGTTTTTATGAGTCAATTTATTGATATTGGAAGCATACCAAACATAGCTTCATATATGCTTTAAATCAATGTAGTCTTTTAAATTGCGGCTATTACAGCACTATTGTGTAGCAGTAATTGAACAAATCACAATTATCCTGCGATACCTATTTAGTACAAAACATCGTTAAGTAGCAGATATAGCAGCACTCTAGCACTGTTGTGTAGTGAAATTTGAACAAACTGTTAGTTTCCGCGATCTGCCATTGACAATATTGATTCATTCTGCAGGATTTATTGCAATGTATGCTACTCTTGCAAATAGAGATGTTGACTGTTGCTTGATTCCGGAGTCTCCGTTTTACCTCGAAGGTCCTGGTGGACTTTATGAATATATAGATAGAAGGCTCAAGGAAAATGGCCACATGGTTATCGTGATTGCTGAAGGAGCGGGACAGGAACTTCTTACCGAGAGTCTGCAATCTGGCAAGAAACAGGATGCTTCTGGAAACAAACTTCTTCAAGATGTTGGGCTATGGATATCTCAAAGTATTAAGGTATGATTGTTATTTGTTCTGTTTGCGGTAGATGCTTCAAAATTCACTATGCTATAGAATTATAGCGCCGCTATTTGACAACAGTACACTGATTGATACAAGTGGTCAAAAGTAGACCAATACCGATTATGCTCTATTTTTTCCGTGCCAATTTTTCGCTATCTTGTAATTACTTTTGAAGGTATTTTTCTCGCTTACATTAAAATTTTGATCTTCCAGGATCATTTTGCCAAAGAGAAGACCCTGCCCATTACTCTCAAATATATAGGTTTGTAAAATTTAACATTCATAAAACATTGCGTGCATAGACATTCAAACCAGCAATCGATACTGAAAGAATATTACTGTCGCTTTTCTGCGTTACAGATCCAACCTATATGATCCGAGCTGTTCCAAGTAATGCTTCTGACAATGTATACTGTACACTTCTTGCTCAAAGTGCTGTTCATGGAGCAATGGCAGGTTACACTGGCTACACAAGTGGACTTGTCCATGGAAGACAGACTTATATACCTTTCTATGTAAGTTCATTAGACATGATATGTGTTTGTTCTAATAAATAGCATTATGACTTTATGGTTCAGTTCAAGAAGGAAAATGAAAACTGATCCGAATTGTTACAATGGTTCGGTCAAACTAAACCGAACTGTTAATGATTCGTCTCAAACAGAATTGAACTGTTAGGACTAAAAAAGGGCAGCTCGGTGCACAAAGTTCCCGCATATTTGTACGCTTTAAAAAAAATAAAACCGAACTGAACCACACTGAAAATAACCAAACTCTGACGGATAATTCACTTACTGAGTTGAACTGAACGTTCGAGAACTGCCTGTCTCTCACAATTGTCGCTCAGAATTTGGTTTTTTTTTCGGTACGGTTCATTTTAACGGTTCGGTTTTTTATGGTTTCGAACACTCCTAGATAGCATTTTCATGGTAACTTTAAGATGTTACATCAGTATTTAGCACATTTTGGTTTTGGATACAACACTGGTACTCTTTTGGTAACTCATGTTTTGTTGCTATGTTATGCAGAGAATCACAGAGAGACAAAACAATGTTGTGATAACTGATAGAATGTGGGCAAGGCTGTTATCTTCAACAAATCAACCTAGTTTTGTGGAGGTCAAGTCTTCCGATGAAGACAAAAAAGGCGAAAACTCATTGGACGAATTACCAGATGGACATTGTTCAGAAGACACTTCGGTTGATGAAATCAGCCGCAATTTGGGATGCTTAGCTCCGCTTGCGGTACCAGTCCTGCGTACGGGCGGGATATCCGGTGTTTAA
Protein sequence

>MS.gene66384.t1

MGLTEPKVITGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFESDEIQAAIVTCGGLCPGLNTVIRELVCSLHHMYGVTRVLGIEGGYRGFYARNTITLTPSSVNNIHKRGGTILGTSRGGHDTNKIVDSIQDRGINQVYIIGGDGTQRGASVIFEEVRRRGLKCSVVGIPKTIDNDIPIIDKSFGFDTAVEEAQRAINAAHVEAESFENGIGVVKLMGRYSGFIAMYATLANRDVDCCLIPESPFYLEGPGGLYEYIDRRLKENGHMVIVIAEGAGQELLTESLQSGKKQDASGNKLLQDVGLWISQSIKDHFAKEKTLPITLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYTSGLVHGRQTYIPFYRITERQNNVVITDRMWARLLSSTNQPSFVEVKSSDEDKKGENSLDELPDGHCSEDTSVDEISRNLGCLAPLAVPVLRTGGISGV