Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67616.t1 | XP_024636312.1 | 74.1 | 232 | 44 | 3 | 52 | 278 | 730 | 950 | 9.20E-86 | 327 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67616.t1 | Q7XA40 | 34.1 | 85 | 55 | 1 | 2 | 85 | 3 | 87 | 1.2e-06 | 55.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67616.t1 | G7IVW4 | 74.1 | 232 | 44 | 3 | 52 | 278 | 571 | 791 | 6.7e-86 | 327.0 |
| MS.gene67616.t1 | G7IVW4 | 91.3 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 1.3e-36 | 163.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene67616 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene67616 | -0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene67616 | -0.819884 | 9.19E-53 | -1.69E-46 |
| MS.gene052589 | MS.gene67616 | 0.81619 | 6.28E-52 | -1.69E-46 |
| MS.gene053873 | MS.gene67616 | 0.82562 | 4.24E-54 | -1.69E-46 |
| MS.gene054102 | MS.gene67616 | 0.859024 | 5.50E-63 | -1.69E-46 |
| MS.gene054110 | MS.gene67616 | 0.80258 | 5.25E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene67616 | 0.803804 | 2.93E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene67616 | 0.81216 | 4.87E-51 | -1.69E-46 |
| MS.gene056337 | MS.gene67616 | 0.822632 | 2.14E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene67616 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene67616 | 0.823815 | 1.13E-53 | -1.69E-46 |
| MS.gene057825 | MS.gene67616 | 0.814094 | 1.84E-51 | -1.69E-46 |
| MS.gene057888 | MS.gene67616 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene67616 | 0.818687 | 1.72E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene67616 | 0.812198 | 4.78E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67616.t1 | MTR_3g015280 | 73.191 | 235 | 47 | 3 | 52 | 281 | 571 | 794 | 1.47e-107 | 330 |
| MS.gene67616.t1 | MTR_3g015280 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 2.08e-36 | 138 |
| MS.gene67616.t1 | MTR_3g015550 | 63.736 | 273 | 62 | 5 | 52 | 298 | 608 | 869 | 6.68e-101 | 315 |
| MS.gene67616.t1 | MTR_3g015550 | 92.391 | 92 | 7 | 0 | 1 | 92 | 38 | 129 | 1.29e-37 | 142 |
| MS.gene67616.t1 | MTR_3g015550 | 63.736 | 273 | 62 | 5 | 52 | 298 | 571 | 832 | 7.51e-101 | 315 |
| MS.gene67616.t1 | MTR_3g015550 | 92.391 | 92 | 7 | 0 | 1 | 92 | 1 | 92 | 1.35e-37 | 142 |
| MS.gene67616.t1 | MTR_4g050790 | 67.206 | 247 | 54 | 5 | 52 | 282 | 571 | 806 | 5.34e-99 | 308 |
| MS.gene67616.t1 | MTR_4g050790 | 90.217 | 92 | 9 | 0 | 1 | 92 | 1 | 92 | 8.21e-47 | 168 |
| MS.gene67616.t1 | MTR_3g015500 | 62.451 | 253 | 68 | 5 | 52 | 298 | 609 | 840 | 6.48e-88 | 281 |
| MS.gene67616.t1 | MTR_3g015500 | 89.130 | 92 | 10 | 0 | 1 | 92 | 39 | 130 | 3.32e-46 | 167 |
| MS.gene67616.t1 | MTR_3g015560 | 57.143 | 259 | 75 | 6 | 56 | 290 | 574 | 820 | 4.16e-77 | 251 |
| MS.gene67616.t1 | MTR_3g015560 | 90.110 | 91 | 9 | 0 | 1 | 91 | 1 | 91 | 3.20e-35 | 135 |
| MS.gene67616.t1 | MTR_4g022560 | 44.444 | 153 | 78 | 4 | 117 | 264 | 644 | 794 | 4.35e-25 | 105 |
| MS.gene67616.t1 | MTR_4g022540 | 42.763 | 152 | 79 | 4 | 118 | 264 | 640 | 788 | 2.41e-23 | 100 |
| MS.gene67616.t1 | MTR_4g022460 | 43.421 | 152 | 78 | 4 | 118 | 264 | 644 | 792 | 2.88e-23 | 100 |
| MS.gene67616.t1 | MTR_4g021690 | 43.137 | 153 | 77 | 6 | 117 | 264 | 644 | 791 | 4.79e-23 | 99.8 |
| MS.gene67616.t1 | MTR_5g028290 | 37.500 | 176 | 102 | 5 | 118 | 287 | 649 | 822 | 3.50e-22 | 97.4 |
| MS.gene67616.t1 | MTR_5g037460 | 35.838 | 173 | 104 | 4 | 116 | 285 | 498 | 666 | 9.29e-22 | 95.9 |
| MS.gene67616.t1 | MTR_4g022960 | 41.830 | 153 | 82 | 4 | 117 | 264 | 587 | 737 | 1.20e-21 | 95.9 |
| MS.gene67616.t1 | MTR_5g028610 | 39.521 | 167 | 91 | 5 | 118 | 279 | 619 | 780 | 1.03e-20 | 93.2 |
| MS.gene67616.t1 | MTR_5g028420 | 35.165 | 182 | 105 | 4 | 118 | 287 | 616 | 796 | 1.43e-20 | 92.4 |
| MS.gene67616.t1 | MTR_4g022480 | 44.186 | 129 | 64 | 4 | 117 | 240 | 642 | 767 | 4.75e-20 | 90.9 |
| MS.gene67616.t1 | MTR_5g028340 | 35.928 | 167 | 100 | 5 | 118 | 279 | 622 | 786 | 5.61e-20 | 90.9 |
| MS.gene67616.t1 | MTR_4g022950 | 43.939 | 132 | 67 | 4 | 117 | 243 | 48 | 177 | 9.71e-20 | 89.4 |
| MS.gene67616.t1 | MTR_0230s0010 | 36.571 | 175 | 94 | 8 | 116 | 281 | 564 | 730 | 1.96e-19 | 89.4 |
| MS.gene67616.t1 | MTR_3g018980 | 35.429 | 175 | 105 | 6 | 118 | 289 | 650 | 819 | 2.13e-19 | 89.0 |
| MS.gene67616.t1 | MTR_3g018980 | 35.429 | 175 | 105 | 6 | 118 | 289 | 650 | 819 | 2.96e-19 | 88.6 |
| MS.gene67616.t1 | MTR_5g028070 | 34.737 | 190 | 98 | 6 | 106 | 279 | 757 | 936 | 4.63e-19 | 88.2 |
| MS.gene67616.t1 | MTR_5g035530 | 32.386 | 176 | 112 | 4 | 116 | 288 | 516 | 687 | 5.35e-19 | 87.8 |
| MS.gene67616.t1 | MTR_5g037450 | 33.526 | 173 | 108 | 4 | 116 | 285 | 641 | 809 | 6.40e-19 | 87.8 |
| MS.gene67616.t1 | MTR_5g028750 | 35.928 | 167 | 101 | 4 | 118 | 279 | 606 | 771 | 1.61e-18 | 86.7 |
| MS.gene67616.t1 | MTR_0005s0200 | 35.795 | 176 | 100 | 8 | 118 | 288 | 665 | 832 | 1.73e-18 | 86.3 |
| MS.gene67616.t1 | MTR_5g072340 | 36.970 | 165 | 97 | 6 | 116 | 279 | 628 | 786 | 3.28e-18 | 85.5 |
| MS.gene67616.t1 | MTR_2g078070 | 35.227 | 176 | 100 | 6 | 118 | 282 | 645 | 817 | 4.17e-18 | 85.1 |
| MS.gene67616.t1 | MTR_1g023600 | 38.012 | 171 | 97 | 7 | 116 | 282 | 623 | 788 | 5.20e-18 | 85.1 |
| MS.gene67616.t1 | MTR_3g035810 | 33.708 | 178 | 107 | 7 | 118 | 289 | 619 | 791 | 7.93e-18 | 84.3 |
| MS.gene67616.t1 | MTR_3g022130 | 33.520 | 179 | 105 | 7 | 118 | 289 | 625 | 796 | 1.04e-17 | 84.0 |
| MS.gene67616.t1 | MTR_0133s0020 | 32.759 | 174 | 107 | 5 | 116 | 283 | 626 | 795 | 1.05e-17 | 84.0 |
| MS.gene67616.t1 | MTR_3g022940 | 35.028 | 177 | 106 | 7 | 118 | 289 | 635 | 807 | 1.06e-17 | 84.0 |
| MS.gene67616.t1 | MTR_5g037500 | 33.721 | 172 | 105 | 3 | 116 | 283 | 569 | 735 | 1.16e-17 | 84.0 |
| MS.gene67616.t1 | MTR_1g022380 | 37.059 | 170 | 94 | 7 | 116 | 279 | 621 | 783 | 1.56e-17 | 83.6 |
| MS.gene67616.t1 | MTR_3g015260 | 34.286 | 175 | 107 | 6 | 118 | 289 | 651 | 820 | 2.04e-17 | 83.2 |
| MS.gene67616.t1 | MTR_6g052760 | 33.526 | 173 | 102 | 7 | 116 | 281 | 623 | 789 | 2.06e-17 | 83.2 |
| MS.gene67616.t1 | MTR_3g027250 | 33.333 | 177 | 107 | 7 | 118 | 289 | 636 | 806 | 2.15e-17 | 83.2 |
| MS.gene67616.t1 | MTR_0511s0020 | 33.526 | 173 | 102 | 7 | 116 | 281 | 605 | 771 | 2.23e-17 | 83.2 |
| MS.gene67616.t1 | MTR_6g046130 | 33.333 | 174 | 102 | 7 | 116 | 283 | 617 | 782 | 2.32e-17 | 83.2 |
| MS.gene67616.t1 | MTR_3g027420 | 35.227 | 176 | 103 | 7 | 118 | 289 | 639 | 807 | 2.37e-17 | 83.2 |
| MS.gene67616.t1 | MTR_3g015260 | 34.286 | 175 | 107 | 6 | 118 | 289 | 651 | 820 | 2.92e-17 | 82.8 |
| MS.gene67616.t1 | MTR_5g035480 | 32.663 | 199 | 119 | 8 | 116 | 306 | 619 | 810 | 3.43e-17 | 82.4 |
| MS.gene67616.t1 | MTR_5g040770 | 33.333 | 171 | 107 | 4 | 116 | 283 | 400 | 566 | 3.43e-17 | 82.4 |
| MS.gene67616.t1 | MTR_5g035280 | 32.558 | 172 | 107 | 4 | 116 | 283 | 631 | 797 | 3.63e-17 | 82.4 |
| MS.gene67616.t1 | MTR_3g019040 | 35.673 | 171 | 98 | 6 | 117 | 284 | 649 | 810 | 4.34e-17 | 82.4 |
| MS.gene67616.t1 | MTR_8g037220 | 44.792 | 96 | 52 | 1 | 3 | 97 | 787 | 882 | 4.68e-17 | 82.4 |
| MS.gene67616.t1 | MTR_8g037220 | 44.792 | 96 | 52 | 1 | 3 | 97 | 1008 | 1103 | 4.88e-17 | 82.0 |
| MS.gene67616.t1 | MTR_5g072140 | 36.310 | 168 | 100 | 6 | 116 | 282 | 586 | 747 | 7.75e-17 | 81.3 |
| MS.gene67616.t1 | MTR_5g034770 | 31.395 | 172 | 108 | 5 | 116 | 284 | 615 | 779 | 8.18e-17 | 81.3 |
| MS.gene67616.t1 | MTR_6g052455 | 33.526 | 173 | 102 | 7 | 116 | 281 | 513 | 679 | 8.23e-17 | 81.3 |
| MS.gene67616.t1 | MTR_3g025360 | 33.146 | 178 | 108 | 7 | 118 | 289 | 664 | 836 | 1.04e-16 | 81.3 |
| MS.gene67616.t1 | MTR_5g070490 | 35.714 | 168 | 101 | 6 | 116 | 282 | 623 | 784 | 1.41e-16 | 80.9 |
| MS.gene67616.t1 | MTR_5g071800 | 37.500 | 168 | 98 | 6 | 116 | 282 | 626 | 787 | 1.47e-16 | 80.5 |
| MS.gene67616.t1 | MTR_8g011180 | 37.190 | 121 | 71 | 3 | 3 | 121 | 8 | 125 | 1.72e-16 | 80.5 |
| MS.gene67616.t1 | MTR_3g021380 | 33.523 | 176 | 106 | 7 | 120 | 289 | 627 | 797 | 2.23e-16 | 80.1 |
| MS.gene67616.t1 | MTR_3g022790 | 33.523 | 176 | 105 | 7 | 117 | 289 | 644 | 810 | 2.49e-16 | 80.1 |
| MS.gene67616.t1 | MTR_3g023030 | 32.584 | 178 | 108 | 7 | 118 | 289 | 651 | 822 | 2.53e-16 | 80.1 |
| MS.gene67616.t1 | MTR_8g036195 | 33.333 | 180 | 109 | 6 | 118 | 291 | 605 | 779 | 2.75e-16 | 79.7 |
| MS.gene67616.t1 | MTR_3g023030 | 32.584 | 178 | 108 | 7 | 118 | 289 | 617 | 788 | 2.76e-16 | 79.7 |
| MS.gene67616.t1 | MTR_8g010440 | 39.496 | 119 | 65 | 2 | 3 | 120 | 8 | 120 | 3.14e-16 | 79.7 |
| MS.gene67616.t1 | MTR_7g013560 | 42.268 | 97 | 54 | 2 | 3 | 97 | 8 | 104 | 3.85e-16 | 79.3 |
| MS.gene67616.t1 | MTR_3g026660 | 33.140 | 172 | 106 | 4 | 116 | 283 | 675 | 841 | 3.91e-16 | 79.3 |
| MS.gene67616.t1 | MTR_5g071670 | 37.576 | 165 | 96 | 6 | 116 | 279 | 619 | 777 | 3.99e-16 | 79.3 |
| MS.gene67616.t1 | MTR_8g011550 | 49.412 | 85 | 41 | 2 | 3 | 85 | 8 | 92 | 4.02e-16 | 79.3 |
| MS.gene67616.t1 | MTR_3g026660 | 33.140 | 172 | 106 | 4 | 116 | 283 | 618 | 784 | 4.60e-16 | 79.3 |
| MS.gene67616.t1 | MTR_0065s0100 | 49.412 | 85 | 41 | 2 | 3 | 85 | 8 | 92 | 6.20e-16 | 78.6 |
| MS.gene67616.t1 | MTR_3g071130 | 36.196 | 163 | 90 | 7 | 118 | 273 | 633 | 788 | 6.44e-16 | 78.6 |
| MS.gene67616.t1 | MTR_0425s0020 | 30.857 | 175 | 111 | 6 | 118 | 289 | 661 | 828 | 6.55e-16 | 78.6 |
| MS.gene67616.t1 | MTR_7g078300 | 36.641 | 131 | 70 | 4 | 3 | 120 | 8 | 138 | 6.57e-16 | 78.6 |
| MS.gene67616.t1 | MTR_8g011170 | 48.810 | 84 | 42 | 1 | 3 | 85 | 8 | 91 | 7.47e-16 | 78.6 |
| MS.gene67616.t1 | MTR_8g027540 | 47.674 | 86 | 43 | 1 | 3 | 86 | 8 | 93 | 8.35e-16 | 78.2 |
| MS.gene67616.t1 | MTR_3g027200 | 31.148 | 183 | 110 | 8 | 118 | 289 | 650 | 827 | 8.67e-16 | 78.2 |
| MS.gene67616.t1 | MTR_3g024460 | 31.073 | 177 | 111 | 7 | 117 | 289 | 254 | 423 | 8.79e-16 | 78.2 |
| MS.gene67616.t1 | MTR_7g078640 | 35.878 | 131 | 71 | 4 | 3 | 120 | 8 | 138 | 8.96e-16 | 78.2 |
| MS.gene67616.t1 | MTR_6g046480 | 33.908 | 174 | 101 | 7 | 116 | 283 | 620 | 785 | 9.00e-16 | 78.2 |
| MS.gene67616.t1 | MTR_8g011850 | 40.708 | 113 | 58 | 2 | 3 | 115 | 1109 | 1212 | 9.14e-16 | 78.6 |
| MS.gene67616.t1 | MTR_3g021100 | 32.022 | 178 | 110 | 7 | 118 | 289 | 643 | 815 | 1.14e-15 | 78.2 |
| MS.gene67616.t1 | MTR_3g071070 | 36.196 | 163 | 90 | 7 | 118 | 273 | 428 | 583 | 1.40e-15 | 77.8 |
| MS.gene67616.t1 | MTR_6g016430 | 34.848 | 198 | 108 | 8 | 118 | 305 | 640 | 826 | 1.51e-15 | 77.8 |
| MS.gene67616.t1 | MTR_3g022920 | 32.022 | 178 | 110 | 7 | 118 | 289 | 628 | 800 | 1.57e-15 | 77.4 |
| MS.gene67616.t1 | MTR_6g046440 | 34.104 | 173 | 101 | 7 | 118 | 283 | 564 | 730 | 1.82e-15 | 77.4 |
| MS.gene67616.t1 | MTR_5g071310 | 36.364 | 165 | 98 | 6 | 116 | 279 | 593 | 751 | 2.36e-15 | 77.0 |
| MS.gene67616.t1 | MTR_0144s0060 | 32.184 | 174 | 104 | 7 | 116 | 283 | 617 | 782 | 2.57e-15 | 77.0 |
| MS.gene67616.t1 | MTR_5g071570 | 35.465 | 172 | 102 | 6 | 116 | 283 | 627 | 793 | 2.71e-15 | 77.0 |
| MS.gene67616.t1 | MTR_3g086070 | 30.851 | 188 | 114 | 7 | 116 | 297 | 618 | 795 | 3.08e-15 | 76.6 |
| MS.gene67616.t1 | MTR_3g023320 | 30.000 | 190 | 117 | 7 | 116 | 299 | 621 | 800 | 3.35e-15 | 76.6 |
| MS.gene67616.t1 | MTR_1643s0010 | 32.919 | 161 | 98 | 6 | 132 | 289 | 1 | 154 | 4.03e-15 | 75.1 |
| MS.gene67616.t1 | MTR_5g076840 | 41.860 | 86 | 49 | 1 | 3 | 87 | 8 | 93 | 5.60e-15 | 75.9 |
| MS.gene67616.t1 | MTR_3g019000 | 33.898 | 177 | 106 | 7 | 118 | 289 | 648 | 818 | 7.35e-15 | 75.5 |
| MS.gene67616.t1 | MTR_0002s0110 | 31.250 | 208 | 108 | 8 | 103 | 281 | 610 | 811 | 7.97e-15 | 75.5 |
| MS.gene67616.t1 | MTR_0133s0030 | 31.034 | 174 | 107 | 7 | 116 | 282 | 618 | 785 | 8.74e-15 | 75.5 |
| MS.gene67616.t1 | MTR_3g035940 | 31.250 | 208 | 108 | 8 | 103 | 281 | 610 | 811 | 9.41e-15 | 75.1 |
| MS.gene67616.t1 | MTR_3g035480 | 31.250 | 208 | 108 | 8 | 103 | 281 | 610 | 811 | 1.12e-14 | 75.1 |
| MS.gene67616.t1 | MTR_3g020890 | 31.613 | 155 | 100 | 4 | 132 | 283 | 653 | 804 | 1.12e-14 | 75.1 |
| MS.gene67616.t1 | MTR_5g039570 | 37.059 | 170 | 100 | 6 | 116 | 282 | 395 | 560 | 1.13e-14 | 74.7 |
| MS.gene67616.t1 | MTR_5g039570 | 31.373 | 153 | 96 | 4 | 2 | 153 | 3 | 147 | 5.32e-11 | 63.5 |
| MS.gene67616.t1 | MTR_3g021170 | 33.714 | 175 | 101 | 7 | 118 | 284 | 638 | 805 | 1.13e-14 | 75.1 |
| MS.gene67616.t1 | MTR_4g119195 | 41.860 | 86 | 49 | 1 | 3 | 87 | 8 | 93 | 1.29e-14 | 74.7 |
| MS.gene67616.t1 | MTR_4g119195 | 41.860 | 86 | 49 | 1 | 3 | 87 | 8 | 93 | 1.52e-14 | 74.3 |
| MS.gene67616.t1 | MTR_7g491180 | 31.200 | 125 | 73 | 4 | 4 | 116 | 9 | 132 | 1.65e-14 | 74.3 |
| MS.gene67616.t1 | MTR_7g091190 | 31.200 | 125 | 73 | 4 | 4 | 116 | 9 | 132 | 1.65e-14 | 74.3 |
| MS.gene67616.t1 | MTR_8g038590 | 33.939 | 165 | 99 | 7 | 118 | 279 | 661 | 818 | 2.04e-14 | 74.3 |
| MS.gene67616.t1 | MTR_3g022300 | 30.857 | 175 | 108 | 7 | 118 | 289 | 661 | 825 | 2.17e-14 | 74.3 |
| MS.gene67616.t1 | MTR_0002s0120 | 31.250 | 208 | 108 | 8 | 103 | 281 | 393 | 594 | 2.27e-14 | 73.9 |
| MS.gene67616.t1 | MTR_7g021000 | 31.250 | 176 | 114 | 5 | 117 | 289 | 645 | 816 | 2.58e-14 | 73.9 |
| MS.gene67616.t1 | MTR_4g055630 | 33.898 | 177 | 108 | 6 | 116 | 288 | 629 | 800 | 2.81e-14 | 73.9 |
| MS.gene67616.t1 | MTR_6g046930 | 33.333 | 174 | 102 | 6 | 116 | 282 | 616 | 782 | 3.06e-14 | 73.6 |
| MS.gene67616.t1 | MTR_0002s0090 | 29.952 | 207 | 111 | 7 | 103 | 281 | 610 | 810 | 3.08e-14 | 73.6 |
| MS.gene67616.t1 | MTR_3g035500 | 29.952 | 207 | 111 | 7 | 103 | 281 | 610 | 810 | 3.08e-14 | 73.6 |
| MS.gene67616.t1 | MTR_3g021340 | 32.386 | 176 | 104 | 7 | 118 | 289 | 637 | 801 | 3.57e-14 | 73.6 |
| MS.gene67616.t1 | MTR_7g021000 | 31.250 | 176 | 114 | 5 | 117 | 289 | 645 | 816 | 4.41e-14 | 73.2 |
| MS.gene67616.t1 | MTR_3g018970 | 32.768 | 177 | 108 | 7 | 118 | 289 | 103 | 273 | 5.20e-14 | 72.8 |
| MS.gene67616.t1 | MTR_7g071940 | 33.714 | 175 | 109 | 6 | 116 | 287 | 618 | 788 | 5.60e-14 | 72.8 |
| MS.gene67616.t1 | MTR_5g070960 | 34.503 | 171 | 103 | 7 | 116 | 282 | 628 | 793 | 8.18e-14 | 72.4 |
| MS.gene67616.t1 | MTR_8g011300 | 44.304 | 79 | 43 | 1 | 3 | 80 | 8 | 86 | 9.47e-14 | 72.0 |
| MS.gene67616.t1 | MTR_0256s0050 | 30.857 | 175 | 108 | 7 | 116 | 283 | 588 | 756 | 1.25e-13 | 72.0 |
| MS.gene67616.t1 | MTR_5g071780 | 35.503 | 169 | 96 | 8 | 116 | 279 | 625 | 785 | 1.81e-13 | 71.2 |
| MS.gene67616.t1 | MTR_3g022600 | 30.726 | 179 | 112 | 7 | 118 | 289 | 661 | 834 | 2.27e-13 | 71.2 |
| MS.gene67616.t1 | MTR_3g070590 | 36.364 | 132 | 75 | 6 | 118 | 247 | 633 | 757 | 2.29e-13 | 70.9 |
| MS.gene67616.t1 | MTR_3g022740 | 30.769 | 169 | 89 | 5 | 117 | 284 | 370 | 511 | 2.39e-13 | 70.9 |
| MS.gene67616.t1 | MTR_3g022400 | 29.944 | 177 | 115 | 6 | 118 | 289 | 632 | 804 | 2.53e-13 | 70.9 |
| MS.gene67616.t1 | MTR_3g022400 | 29.944 | 177 | 115 | 6 | 118 | 289 | 632 | 804 | 3.00e-13 | 70.9 |
| MS.gene67616.t1 | MTR_5g071220 | 36.207 | 174 | 98 | 7 | 116 | 283 | 626 | 792 | 3.11e-13 | 70.9 |
| MS.gene67616.t1 | MTR_5g071220 | 36.207 | 174 | 98 | 7 | 116 | 283 | 626 | 792 | 3.17e-13 | 70.5 |
| MS.gene67616.t1 | MTR_6g452490 | 44.304 | 79 | 43 | 1 | 3 | 80 | 8 | 86 | 3.53e-13 | 70.5 |
| MS.gene67616.t1 | MTR_7g091140 | 35.870 | 92 | 56 | 2 | 4 | 92 | 9 | 100 | 3.89e-13 | 70.5 |
| MS.gene67616.t1 | MTR_6g037690 | 39.286 | 84 | 50 | 1 | 5 | 87 | 10 | 93 | 4.80e-13 | 68.9 |
| MS.gene67616.t1 | MTR_6g047450 | 31.818 | 176 | 105 | 7 | 116 | 283 | 619 | 787 | 5.36e-13 | 70.1 |
| MS.gene67616.t1 | MTR_7g091550 | 34.783 | 92 | 57 | 2 | 4 | 92 | 11 | 102 | 5.83e-13 | 69.7 |
| MS.gene67616.t1 | MTR_3g034460 | 31.953 | 169 | 103 | 7 | 118 | 281 | 633 | 794 | 7.68e-13 | 69.3 |
| MS.gene67616.t1 | MTR_3g035960 | 30.288 | 208 | 110 | 8 | 103 | 281 | 608 | 809 | 7.72e-13 | 69.3 |
| MS.gene67616.t1 | MTR_3g022870 | 30.337 | 178 | 115 | 6 | 117 | 289 | 634 | 807 | 7.93e-13 | 69.3 |
| MS.gene67616.t1 | MTR_8g445980 | 39.806 | 103 | 60 | 2 | 2 | 103 | 9 | 110 | 1.13e-12 | 68.9 |
| MS.gene67616.t1 | MTR_3g031940 | 33.136 | 169 | 103 | 7 | 117 | 281 | 651 | 813 | 1.33e-12 | 68.9 |
| MS.gene67616.t1 | MTR_6g046620 | 30.636 | 173 | 108 | 6 | 116 | 283 | 571 | 736 | 1.33e-12 | 68.6 |
| MS.gene67616.t1 | MTR_3g033860 | 31.953 | 169 | 103 | 7 | 118 | 281 | 649 | 810 | 1.35e-12 | 68.9 |
| MS.gene67616.t1 | MTR_3g027470 | 29.139 | 151 | 97 | 5 | 118 | 264 | 556 | 700 | 1.53e-12 | 68.6 |
| MS.gene67616.t1 | MTR_5g035240 | 31.214 | 173 | 108 | 5 | 116 | 283 | 629 | 795 | 1.60e-12 | 68.6 |
| MS.gene67616.t1 | MTR_3g014080 | 30.114 | 176 | 114 | 6 | 118 | 289 | 657 | 827 | 1.65e-12 | 68.6 |
| MS.gene67616.t1 | MTR_1g008240 | 35.088 | 171 | 96 | 8 | 118 | 283 | 634 | 794 | 1.71e-12 | 68.6 |
| MS.gene67616.t1 | MTR_3g014080 | 30.114 | 176 | 114 | 6 | 118 | 289 | 657 | 827 | 1.84e-12 | 68.2 |
| MS.gene67616.t1 | MTR_3g032150 | 33.728 | 169 | 102 | 7 | 117 | 281 | 646 | 808 | 1.86e-12 | 68.2 |
| MS.gene67616.t1 | MTR_3g022060 | 29.609 | 179 | 112 | 7 | 118 | 289 | 538 | 709 | 2.33e-12 | 68.2 |
| MS.gene67616.t1 | MTR_4g126000 | 31.250 | 176 | 113 | 6 | 111 | 283 | 485 | 655 | 2.55e-12 | 67.8 |
| MS.gene67616.t1 | MTR_5g072250 | 36.095 | 169 | 97 | 7 | 116 | 279 | 624 | 786 | 2.87e-12 | 67.8 |
| MS.gene67616.t1 | MTR_8g038570 | 34.000 | 150 | 85 | 8 | 118 | 261 | 666 | 807 | 2.98e-12 | 67.8 |
| MS.gene67616.t1 | MTR_2g038900 | 33.929 | 168 | 101 | 8 | 118 | 282 | 656 | 816 | 3.17e-12 | 67.8 |
| MS.gene67616.t1 | MTR_5g071470 | 35.758 | 165 | 99 | 6 | 116 | 279 | 626 | 784 | 3.22e-12 | 67.4 |
| MS.gene67616.t1 | MTR_2g038930 | 33.728 | 169 | 102 | 8 | 118 | 283 | 493 | 654 | 3.35e-12 | 67.4 |
| MS.gene67616.t1 | MTR_3g021400 | 32.961 | 179 | 108 | 7 | 118 | 289 | 627 | 800 | 3.48e-12 | 67.4 |
| MS.gene67616.t1 | MTR_2g038760 | 33.728 | 169 | 102 | 8 | 118 | 283 | 667 | 828 | 3.75e-12 | 67.4 |
| MS.gene67616.t1 | MTR_3g018930 | 31.285 | 179 | 112 | 6 | 118 | 289 | 652 | 826 | 3.76e-12 | 67.4 |
| MS.gene67616.t1 | MTR_3g032370 | 33.136 | 169 | 103 | 7 | 117 | 281 | 646 | 808 | 4.23e-12 | 67.4 |
| MS.gene67616.t1 | MTR_3g030960 | 32.121 | 165 | 102 | 7 | 117 | 277 | 648 | 806 | 4.72e-12 | 67.0 |
| MS.gene67616.t1 | MTR_6g084550 | 32.738 | 168 | 103 | 6 | 118 | 281 | 634 | 795 | 4.74e-12 | 67.0 |
| MS.gene67616.t1 | MTR_3g033080 | 30.814 | 172 | 108 | 7 | 132 | 297 | 665 | 831 | 5.00e-12 | 67.0 |
| MS.gene67616.t1 | MTR_1g078490 | 32.407 | 108 | 66 | 3 | 3 | 103 | 8 | 115 | 5.15e-12 | 67.0 |
| MS.gene67616.t1 | MTR_6g046570 | 34.351 | 131 | 78 | 4 | 116 | 244 | 625 | 749 | 5.62e-12 | 67.0 |
| MS.gene67616.t1 | MTR_1g047910 | 28.472 | 144 | 90 | 4 | 7 | 138 | 12 | 154 | 7.53e-12 | 66.2 |
| MS.gene67616.t1 | MTR_0137s0070 | 30.899 | 178 | 110 | 7 | 118 | 289 | 75 | 245 | 7.98e-12 | 66.2 |
| MS.gene67616.t1 | MTR_0137s0070 | 30.114 | 176 | 114 | 6 | 118 | 289 | 75 | 245 | 8.87e-12 | 65.9 |
| MS.gene67616.t1 | MTR_4g050410 | 31.765 | 170 | 102 | 7 | 118 | 281 | 647 | 808 | 9.43e-12 | 66.2 |
| MS.gene67616.t1 | MTR_3g036050 | 31.765 | 170 | 102 | 7 | 118 | 281 | 260 | 421 | 9.88e-12 | 66.2 |
| MS.gene67616.t1 | MTR_8g030860 | 29.032 | 186 | 120 | 8 | 118 | 297 | 655 | 834 | 1.07e-11 | 65.9 |
| MS.gene67616.t1 | MTR_3g022230 | 29.885 | 174 | 109 | 8 | 118 | 289 | 651 | 813 | 1.12e-11 | 65.9 |
| MS.gene67616.t1 | MTR_3g034430 | 30.357 | 168 | 107 | 6 | 118 | 281 | 649 | 810 | 1.26e-11 | 65.9 |
| MS.gene67616.t1 | MTR_3g032500 | 32.544 | 169 | 104 | 7 | 117 | 281 | 652 | 814 | 1.27e-11 | 65.9 |
| MS.gene67616.t1 | MTR_5g070470 | 37.278 | 169 | 99 | 6 | 116 | 281 | 627 | 791 | 1.40e-11 | 65.9 |
| MS.gene67616.t1 | MTR_3g034380 | 31.953 | 169 | 103 | 7 | 118 | 281 | 648 | 809 | 1.68e-11 | 65.5 |
| MS.gene67616.t1 | MTR_5g095910 | 32.948 | 173 | 98 | 7 | 118 | 281 | 649 | 812 | 1.73e-11 | 65.5 |
| MS.gene67616.t1 | MTR_3g032960 | 32.544 | 169 | 104 | 7 | 117 | 281 | 648 | 810 | 1.88e-11 | 65.5 |
| MS.gene67616.t1 | MTR_3g032800 | 31.953 | 169 | 105 | 7 | 117 | 281 | 648 | 810 | 2.15e-11 | 65.1 |
| MS.gene67616.t1 | MTR_3g033240 | 31.325 | 166 | 104 | 7 | 118 | 279 | 652 | 811 | 2.95e-11 | 64.7 |
| MS.gene67616.t1 | MTR_3g022870 | 28.402 | 169 | 113 | 5 | 126 | 289 | 606 | 771 | 3.93e-11 | 64.3 |
| MS.gene67616.t1 | MTR_2g063777 | 31.548 | 168 | 105 | 7 | 118 | 281 | 646 | 807 | 4.26e-11 | 64.3 |
| MS.gene67616.t1 | MTR_4g094540 | 30.392 | 102 | 70 | 1 | 1 | 101 | 5 | 106 | 5.17e-11 | 63.9 |
| MS.gene67616.t1 | MTR_3g032200 | 32.544 | 169 | 104 | 7 | 117 | 281 | 651 | 813 | 6.65e-11 | 63.5 |
| MS.gene67616.t1 | MTR_6g016420 | 32.984 | 191 | 109 | 8 | 118 | 300 | 618 | 797 | 6.73e-11 | 63.5 |
| MS.gene67616.t1 | MTR_6g016420 | 32.984 | 191 | 109 | 8 | 118 | 300 | 618 | 797 | 6.79e-11 | 63.5 |
| MS.gene67616.t1 | MTR_2g062350 | 38.043 | 92 | 44 | 3 | 4 | 92 | 9 | 90 | 7.31e-11 | 59.7 |
| MS.gene67616.t1 | MTR_3g030980 | 30.366 | 191 | 101 | 7 | 118 | 281 | 625 | 810 | 8.95e-11 | 63.2 |
| MS.gene67616.t1 | MTR_3g028040 | 30.994 | 171 | 106 | 7 | 118 | 283 | 649 | 812 | 9.63e-11 | 63.2 |
| MS.gene67616.t1 | MTR_1g030770 | 44.048 | 84 | 46 | 1 | 3 | 85 | 8 | 91 | 9.81e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67616.t1 | AT3G14470 | 32.967 | 182 | 106 | 7 | 118 | 288 | 651 | 827 | 1.43e-16 | 80.9 |
| MS.gene67616.t1 | AT3G14470 | 32.967 | 182 | 106 | 7 | 118 | 288 | 651 | 827 | 1.43e-16 | 80.9 |
| MS.gene67616.t1 | AT3G14460 | 34.270 | 178 | 95 | 9 | 118 | 281 | 645 | 814 | 3.05e-11 | 64.7 |
Find 54 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTAACTTGATGATTAT+TGG | 0.147753 | 3.3:+9907348 | None:intergenic |
| AGAGGGAGATTAGAATTAAA+AGG | 0.214622 | 3.3:-9905462 | MS.gene67616:CDS |
| CCTCCCTGTTCATAAGTTCT+TGG | 0.252208 | 3.3:+9905076 | None:intergenic |
| TTATGAACAGGGAGGTTATT+TGG | 0.253864 | 3.3:-9905068 | MS.gene67616:CDS |
| CTCAGGCATCTTGAGTTAAA+TGG | 0.260621 | 3.3:-9905609 | MS.gene67616:CDS |
| AAAAGTTACCAGACTGGATA+TGG | 0.295666 | 3.3:-9905239 | MS.gene67616:CDS |
| CTTCGAAAACTAGTTATAGA+TGG | 0.296438 | 3.3:-9905273 | MS.gene67616:CDS |
| CTTCCTCCATGATCGCATTC+TGG | 0.306856 | 3.3:+9905337 | None:intergenic |
| AATCATTTGGAATCTCAAAA+AGG | 0.311022 | 3.3:-9907437 | MS.gene67616:CDS |
| ACAAAGACCTTAAAATCATT+TGG | 0.321357 | 3.3:-9907450 | MS.gene67616:CDS |
| AACTTGATGATTATTGGCCT+TGG | 0.354943 | 3.3:+9907354 | None:intergenic |
| GAAGCGGCACCTTCAACATT+TGG | 0.369042 | 3.3:-9905382 | MS.gene67616:CDS |
| GTGAAATGTCCTTAACTTGT+AGG | 0.378318 | 3.3:+9905914 | None:intergenic |
| CATCATCTTCCTACAAGTTA+AGG | 0.413498 | 3.3:-9905923 | MS.gene67616:CDS |
| GCATCCAAGAACTTATGAAC+AGG | 0.421842 | 3.3:-9905080 | MS.gene67616:CDS |
| ATAATCATCAAGTTAGCAAT+TGG | 0.422665 | 3.3:-9907345 | MS.gene67616:CDS |
| TTAATTCTAATCTCCCTCTC+AGG | 0.424675 | 3.3:+9905466 | None:intergenic |
| GAGGGAGATTAGAATTAAAA+GGG | 0.433859 | 3.3:-9905461 | MS.gene67616:CDS |
| AGCCCTTGCTGTTACAGTCT+TGG | 0.442326 | 3.3:-9907494 | MS.gene67616:CDS |
| GTGAGTGGTGATGTGGTTGC+AGG | 0.444904 | 3.3:+9905295 | None:intergenic |
| ATCGCAATTCCAAATGTTGA+AGG | 0.466477 | 3.3:+9905373 | None:intergenic |
| TTCGAAAACTAGTTATAGAT+GGG | 0.496974 | 3.3:-9905272 | MS.gene67616:CDS |
| GAGAGATTCCATATCCAGTC+TGG | 0.498984 | 3.3:+9905231 | None:intergenic |
| AAAATCTCAATAGAAGTCTC+AGG | 0.499434 | 3.3:-9905626 | MS.gene67616:CDS |
| TCATCAAGTTAGCAATTGGT+TGG | 0.501921 | 3.3:-9907341 | MS.gene67616:CDS |
| TCGAGAAGAAAAGTGATGGC+TGG | 0.520415 | 3.3:-9907256 | MS.gene67616:CDS |
| TGTCGACCAGAATGCGATCA+TGG | 0.521545 | 3.3:-9905343 | MS.gene67616:CDS |
| TCTCTGCAGCATTATTTCGC+AGG | 0.533118 | 3.3:+9905430 | None:intergenic |
| GAGTTTGACATGTATGCCAC+GGG | 0.537783 | 3.3:-9905580 | MS.gene67616:CDS |
| TCAAGTTAGCAATTGGTTGG+AGG | 0.538972 | 3.3:-9907338 | MS.gene67616:CDS |
| TTCAACATTTGGAATTGCGA+TGG | 0.543880 | 3.3:-9905371 | MS.gene67616:CDS |
| ATGTCAAACTATTGCAATTG+TGG | 0.550063 | 3.3:+9905187 | None:intergenic |
| CAAAAGTACTTCTTGAGAAG+CGG | 0.565404 | 3.3:-9905398 | MS.gene67616:CDS |
| GCTTCTTGATGCAGAGTCCA+AGG | 0.572281 | 3.3:-9907371 | MS.gene67616:CDS |
| TTCCAAGACTGTAACAGCAA+GGG | 0.574740 | 3.3:+9907492 | None:intergenic |
| CTGAGCTAAACAACCTGAGA+GGG | 0.586281 | 3.3:-9905479 | MS.gene67616:CDS |
| TTTCGAAGTGAGTGGTGATG+TGG | 0.595857 | 3.3:+9905288 | None:intergenic |
| CTGCGTATCATTAAACGTGA+GGG | 0.599254 | 3.3:-9905112 | MS.gene67616:CDS |
| AGATACAAGGTTACACACTT+CGG | 0.600335 | 3.3:+9905158 | None:intergenic |
| AGAGTTTGACATGTATGCCA+CGG | 0.601475 | 3.3:-9905581 | MS.gene67616:CDS |
| TTTCCAAGACTGTAACAGCA+AGG | 0.623465 | 3.3:+9907491 | None:intergenic |
| ACTGCGTATCATTAAACGTG+AGG | 0.624808 | 3.3:-9905113 | MS.gene67616:CDS |
| AGCTTCGAGAAGAAAAGTGA+TGG | 0.625913 | 3.3:-9907260 | MS.gene67616:CDS |
| CATCCAAGAACTTATGAACA+GGG | 0.627334 | 3.3:-9905079 | MS.gene67616:CDS |
| AAAGTGTCTTCAAAGATACA+AGG | 0.632983 | 3.3:+9905145 | None:intergenic |
| GGACTCTGCATCAAGAAGCA+CGG | 0.638535 | 3.3:+9907375 | None:intergenic |
| TTGTAGGAAGATGATGATGT+TGG | 0.644528 | 3.3:+9905930 | None:intergenic |
| AAGTACAAGTGTAAATGAGT+TGG | 0.662011 | 3.3:-9905502 | MS.gene67616:CDS |
| CAAGTTAAGGACATTTCACG+TGG | 0.674477 | 3.3:-9905910 | MS.gene67616:intron |
| GCTGAGCTAAACAACCTGAG+AGG | 0.683406 | 3.3:-9905480 | MS.gene67616:CDS |
| CGACCAGAATGCGATCATGG+AGG | 0.716007 | 3.3:-9905340 | MS.gene67616:CDS |
| GTTTGACATGTATGCCACGG+GGG | 0.731679 | 3.3:-9905578 | MS.gene67616:CDS |
| CCAAGAACTTATGAACAGGG+AGG | 0.748051 | 3.3:-9905076 | MS.gene67616:CDS |
| AGTTTGACATGTATGCCACG+GGG | 0.790645 | 3.3:-9905579 | MS.gene67616:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATATAAAGAAAATATCT+CGG | - | chr3.3:9905738-9905757 | MS.gene67616:intron | 15.0% |
| !! | TAAGATATATTCATCTATCA+CGG | - | chr3.3:9906815-9906834 | MS.gene67616:intron | 20.0% |
| !! | TCATTTCTTCAATACTATTT+GGG | + | chr3.3:9906789-9906808 | None:intergenic | 20.0% |
| !! | TGATATAAAGAAAATATCTC+GGG | - | chr3.3:9905739-9905758 | MS.gene67616:intron | 20.0% |
| !! | TTCATTTCTTCAATACTATT+TGG | + | chr3.3:9906790-9906809 | None:intergenic | 20.0% |
| !!! | TTTTCAAACATAAAACCTTT+TGG | + | chr3.3:9906319-9906338 | None:intergenic | 20.0% |
| ! | AACTTAGAAGCAAAATTGAA+GGG | - | chr3.3:9905810-9905829 | MS.gene67616:intron | 25.0% |
| ! | ACAAAGACCTTAAAATCATT+TGG | - | chr3.3:9905111-9905130 | MS.gene67616:CDS | 25.0% |
| ! | ATAATCATCAAGTTAGCAAT+TGG | - | chr3.3:9905216-9905235 | MS.gene67616:CDS | 25.0% |
| ! | ATCAAATGATATTAGATGTG+TGG | - | chr3.3:9906384-9906403 | MS.gene67616:intron | 25.0% |
| ! | TAAATTGAAGAGCTTATTCA+TGG | - | chr3.3:9905889-9905908 | MS.gene67616:intron | 25.0% |
| ! | TTCGAAAACTAGTTATAGAT+GGG | - | chr3.3:9907289-9907308 | MS.gene67616:CDS | 25.0% |
| ! | TTTCTATAATTCCCATAGTT+GGG | - | chr3.3:9905612-9905631 | MS.gene67616:CDS | 25.0% |
| !! | AATCATTTGGAATCTCAAAA+AGG | - | chr3.3:9905124-9905143 | MS.gene67616:CDS | 25.0% |
| !! | ACAATGATAATGATGTTCAA+AGG | - | chr3.3:9905675-9905694 | MS.gene67616:intron | 25.0% |
| !! | ATTGCTAACTTGATGATTAT+TGG | + | chr3.3:9905216-9905235 | None:intergenic | 25.0% |
| !! | GATTGATTGGGAATATTTTA+AGG | - | chr3.3:9906177-9906196 | MS.gene67616:intron | 25.0% |
| !! | TGAGATTCCAAATGATTTTA+AGG | + | chr3.3:9905121-9905140 | None:intergenic | 25.0% |
| !!! | AATCCAAACCTTTTAAGAAA+AGG | + | chr3.3:9905991-9906010 | None:intergenic | 25.0% |
| !!! | ATCCAAACCTTTTAAGAAAA+GGG | + | chr3.3:9905990-9906009 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTTCTCGAAATTT+GGG | - | chr3.3:9906151-9906170 | MS.gene67616:intron | 25.0% |
| AAAATATCTCGGGATATCAT+TGG | - | chr3.3:9905749-9905768 | MS.gene67616:intron | 30.0% | |
| AAAATCTCAATAGAAGTCTC+AGG | - | chr3.3:9906935-9906954 | MS.gene67616:intron | 30.0% | |
| AAATATCTCGGGATATCATT+GGG | - | chr3.3:9905750-9905769 | MS.gene67616:intron | 30.0% | |
| AAGTACAAGTGTAAATGAGT+TGG | - | chr3.3:9907059-9907078 | MS.gene67616:intron | 30.0% | |
| AATCGTCTATAGTAACATCT+TGG | + | chr3.3:9906459-9906478 | None:intergenic | 30.0% | |
| AGAGGGAGATTAGAATTAAA+AGG | - | chr3.3:9907099-9907118 | MS.gene67616:intron | 30.0% | |
| ATACAATTGGATTCTCCATA+GGG | + | chr3.3:9905478-9905497 | None:intergenic | 30.0% | |
| ATGTCAAACTATTGCAATTG+TGG | + | chr3.3:9907377-9907396 | None:intergenic | 30.0% | |
| ATTAGATGTGTGGAAGATAT+TGG | - | chr3.3:9906394-9906413 | MS.gene67616:intron | 30.0% | |
| CAACTTAGAAGCAAAATTGA+AGG | - | chr3.3:9905809-9905828 | MS.gene67616:intron | 30.0% | |
| CCAAATTTCGAGAAAACAAA+AGG | + | chr3.3:9906153-9906172 | None:intergenic | 30.0% | |
| CTTCGAAAACTAGTTATAGA+TGG | - | chr3.3:9907288-9907307 | MS.gene67616:CDS | 30.0% | |
| GAATGAAAGAAATCCAAAAG+AGG | - | chr3.3:9905405-9905424 | MS.gene67616:CDS | 30.0% | |
| GAGGGAGATTAGAATTAAAA+GGG | - | chr3.3:9907100-9907119 | MS.gene67616:intron | 30.0% | |
| GATGATCATAACTCAGTTTA+AGG | + | chr3.3:9906252-9906271 | None:intergenic | 30.0% | |
| GGAGAATCCAATTGTATATA+GGG | - | chr3.3:9905481-9905500 | MS.gene67616:CDS | 30.0% | |
| GTTTCTATAATTCCCATAGT+TGG | - | chr3.3:9905611-9905630 | MS.gene67616:CDS | 30.0% | |
| TATACAATTGGATTCTCCAT+AGG | + | chr3.3:9905479-9905498 | None:intergenic | 30.0% | |
| TATTGTTCACTGTTTCCAAA+AGG | - | chr3.3:9906301-9906320 | MS.gene67616:intron | 30.0% | |
| TGAGTTGTTAGATATAGGAA+GGG | - | chr3.3:9906075-9906094 | MS.gene67616:intron | 30.0% | |
| TGGAGAATCCAATTGTATAT+AGG | - | chr3.3:9905480-9905499 | MS.gene67616:CDS | 30.0% | |
| TGTACTTAAAAATCTTCCTC+TGG | - | chr3.3:9906843-9906862 | MS.gene67616:intron | 30.0% | |
| TTCAAAGATAGATCAACACA+AGG | - | chr3.3:9906210-9906229 | MS.gene67616:intron | 30.0% | |
| TTGGAATCTCAAAAAGGATA+TGG | - | chr3.3:9905130-9905149 | MS.gene67616:CDS | 30.0% | |
| TTTGGATTCAGAAAAATCAC+AGG | - | chr3.3:9906003-9906022 | MS.gene67616:intron | 30.0% | |
| ! | AAAGTGTCTTCAAAGATACA+AGG | + | chr3.3:9907419-9907438 | None:intergenic | 30.0% |
| ! | AGACTTCTATTGAGATTTTC+TGG | + | chr3.3:9906934-9906953 | None:intergenic | 30.0% |
| ! | CATAATGTCATGCATTTTAC+AGG | + | chr3.3:9906497-9906516 | None:intergenic | 30.0% |
| ! | GAAGATGAGATCATTTTACA+AGG | - | chr3.3:9907243-9907262 | MS.gene67616:intron | 30.0% |
| ! | GCATTTTGAGCTAAAAATGT+GGG | - | chr3.3:9905697-9905716 | MS.gene67616:intron | 30.0% |
| !! | TCCAAACCTTTTAAGAAAAG+GGG | + | chr3.3:9905989-9906008 | None:intergenic | 30.0% |
| !! | TTTTGGAAACAGTGAACAAT+AGG | + | chr3.3:9906302-9906321 | None:intergenic | 30.0% |
| !!! | AGTTTTAGAGTTTGCAAGTT+CGG | + | chr3.3:9906883-9906902 | None:intergenic | 30.0% |
| !!! | CCTTTTGTTTTCTCGAAATT+TGG | - | chr3.3:9906150-9906169 | MS.gene67616:intron | 30.0% |
| AAAAGTTACCAGACTGGATA+TGG | - | chr3.3:9907322-9907341 | MS.gene67616:CDS | 35.0% | |
| AAATTTGGGCAGGATTGATT+GGG | - | chr3.3:9906165-9906184 | MS.gene67616:intron | 35.0% | |
| AATATCTCGGGATATCATTG+GGG | - | chr3.3:9905751-9905770 | MS.gene67616:intron | 35.0% | |
| AATGAATATGTCGTGGTTGA+AGG | - | chr3.3:9906544-9906563 | MS.gene67616:intron | 35.0% | |
| AATTCAAACAAAATTGCCCG+TGG | - | chr3.3:9905365-9905384 | MS.gene67616:CDS | 35.0% | |
| ACGTTATTTGTCATCTCGTA+GGG | - | chr3.3:9906594-9906613 | MS.gene67616:intron | 35.0% | |
| AGAAGACACTCATTCAGTTA+TGG | - | chr3.3:9906338-9906357 | MS.gene67616:intron | 35.0% | |
| AGATACAAGGTTACACACTT+CGG | + | chr3.3:9907406-9907425 | None:intergenic | 35.0% | |
| ATAATTCCCATAGTTGGGAT+TGG | - | chr3.3:9905617-9905636 | MS.gene67616:CDS | 35.0% | |
| ATCGCAATTCCAAATGTTGA+AGG | + | chr3.3:9907191-9907210 | None:intergenic | 35.0% | |
| CATCATCTTCCTACAAGTTA+AGG | - | chr3.3:9906638-9906657 | MS.gene67616:intron | 35.0% | |
| CATCCAAGAACTTATGAACA+GGG | - | chr3.3:9907482-9907501 | MS.gene67616:CDS | 35.0% | |
| CTCTGTTCCCTATATACAAT+TGG | + | chr3.3:9905491-9905510 | None:intergenic | 35.0% | |
| CTGAGTTGTTAGATATAGGA+AGG | - | chr3.3:9906074-9906093 | MS.gene67616:intron | 35.0% | |
| GAAGACACTCATTCAGTTAT+GGG | - | chr3.3:9906339-9906358 | MS.gene67616:intron | 35.0% | |
| GACATTGTTAAGAAATGTGC+TGG | - | chr3.3:9906097-9906116 | MS.gene67616:intron | 35.0% | |
| GATGCTGAGTTGTTAGATAT+AGG | - | chr3.3:9906070-9906089 | MS.gene67616:intron | 35.0% | |
| GATGTTACTATAGACGATTG+TGG | - | chr3.3:9906460-9906479 | MS.gene67616:intron | 35.0% | |
| GGATGAAAAGAATAGTCAGA+TGG | - | chr3.3:9905772-9905791 | MS.gene67616:intron | 35.0% | |
| GTGAGTACAGATGAAGTTAT+TGG | - | chr3.3:9905527-9905546 | MS.gene67616:CDS | 35.0% | |
| TCATCAAGTTAGCAATTGGT+TGG | - | chr3.3:9905220-9905239 | MS.gene67616:CDS | 35.0% | |
| TCATTCGATAGCCCAATTTA+AGG | + | chr3.3:9905391-9905410 | None:intergenic | 35.0% | |
| TGAAGTTATTGGAAGAGATG+AGG | - | chr3.3:9905538-9905557 | MS.gene67616:CDS | 35.0% | |
| TTAATTCTAATCTCCCTCTC+AGG | + | chr3.3:9907098-9907117 | None:intergenic | 35.0% | |
| TTATGAACAGGGAGGTTATT+TGG | - | chr3.3:9907493-9907512 | MS.gene67616:CDS | 35.0% | |
| TTCAATTTAAGCCACAACTC+AGG | + | chr3.3:9905878-9905897 | None:intergenic | 35.0% | |
| TTGAAGAGCTTATTCATGGA+AGG | - | chr3.3:9905893-9905912 | MS.gene67616:intron | 35.0% | |
| ! | AACTTGATGATTATTGGCCT+TGG | + | chr3.3:9905210-9905229 | None:intergenic | 35.0% |
| ! | ACCCCTTTTCTTAAAAGGTT+TGG | - | chr3.3:9905985-9906004 | MS.gene67616:intron | 35.0% |
| ! | GGCATTTTGAGCTAAAAATG+TGG | - | chr3.3:9905696-9905715 | MS.gene67616:intron | 35.0% |
| ! | TTCAACATTTGGAATTGCGA+TGG | - | chr3.3:9907190-9907209 | MS.gene67616:intron | 35.0% |
| ! | TTGTAGGAAGATGATGATGT+TGG | + | chr3.3:9906634-9906653 | None:intergenic | 35.0% |
| !! | AAACCTTTTAAGAAAAGGGG+TGG | + | chr3.3:9905986-9906005 | None:intergenic | 35.0% |
| !! | ACACTTTTTGTACTGAACTC+TGG | - | chr3.3:9907036-9907055 | MS.gene67616:intron | 35.0% |
| !! | CAAAAGTACTTCTTGAGAAG+CGG | - | chr3.3:9907163-9907182 | MS.gene67616:intron | 35.0% |
| !! | CTAGTTATAGATGGGTTTTG+TGG | - | chr3.3:9907297-9907316 | MS.gene67616:CDS | 35.0% |
| !! | GTGAAATGTCCTTAACTTGT+AGG | + | chr3.3:9906650-9906669 | None:intergenic | 35.0% |
| !!! | AAGCACTTTTTCAGAAACGA+CGG | + | chr3.3:9906277-9906296 | None:intergenic | 35.0% |
| !!! | TAACTAGTTTTCGAAGTGAG+TGG | + | chr3.3:9907284-9907303 | None:intergenic | 35.0% |
| !!! | TCAGATGTTTTTTCCTTCTC+AGG | - | chr3.3:9906712-9906731 | MS.gene67616:intron | 35.0% |
| AAAAATGTGGGTGCATGTCT+CGG | - | chr3.3:9905709-9905728 | MS.gene67616:intron | 40.0% | |
| AACCACGACATATTCATTCC+CGG | + | chr3.3:9906542-9906561 | None:intergenic | 40.0% | |
| AAGAGCTTATTCATGGAAGG+AGG | - | chr3.3:9905896-9905915 | MS.gene67616:intron | 40.0% | |
| AAGGCTGCCAATAGTTCTTA+TGG | + | chr3.3:9906134-9906153 | None:intergenic | 40.0% | |
| AATCCTCCAATCCCAACTAT+GGG | + | chr3.3:9905626-9905645 | None:intergenic | 40.0% | |
| ACTGCGTATCATTAAACGTG+AGG | - | chr3.3:9907448-9907467 | MS.gene67616:CDS | 40.0% | |
| AGAGTTTGACATGTATGCCA+CGG | - | chr3.3:9906980-9906999 | MS.gene67616:intron | 40.0% | |
| AGCTTCGAGAAGAAAAGTGA+TGG | - | chr3.3:9905301-9905320 | MS.gene67616:CDS | 40.0% | |
| ATAGTTGGGATTGGAGGATT+AGG | - | chr3.3:9905626-9905645 | MS.gene67616:CDS | 40.0% | |
| ATTCAGTTATGGGTAGCTGA+GGG | - | chr3.3:9906349-9906368 | MS.gene67616:intron | 40.0% | |
| CAAGAACTTTAAGCCTGAGA+AGG | + | chr3.3:9906728-9906747 | None:intergenic | 40.0% | |
| CAAGTTAAGGACATTTCACG+TGG | - | chr3.3:9906651-9906670 | MS.gene67616:intron | 40.0% | |
| CACGTTATTTGTCATCTCGT+AGG | - | chr3.3:9906593-9906612 | MS.gene67616:intron | 40.0% | |
| CCAATAGTTCTTATGGCAAG+GGG | + | chr3.3:9906127-9906146 | None:intergenic | 40.0% | |
| CGATTGCTTGCATTCATTTG+TGG | + | chr3.3:9906682-9906701 | None:intergenic | 40.0% | |
| CGTTATTTGTCATCTCGTAG+GGG | - | chr3.3:9906595-9906614 | MS.gene67616:intron | 40.0% | |
| CTCAGGCATCTTGAGTTAAA+TGG | - | chr3.3:9906952-9906971 | MS.gene67616:intron | 40.0% | |
| CTGCGTATCATTAAACGTGA+GGG | - | chr3.3:9907449-9907468 | MS.gene67616:CDS | 40.0% | |
| CTGGAAACAACAGAGTAAGA+CGG | - | chr3.3:9905324-9905343 | MS.gene67616:CDS | 40.0% | |
| GAAATTTGGGCAGGATTGAT+TGG | - | chr3.3:9906164-9906183 | MS.gene67616:intron | 40.0% | |
| GCATCCAAGAACTTATGAAC+AGG | - | chr3.3:9907481-9907500 | MS.gene67616:CDS | 40.0% | |
| GCCAATAGTTCTTATGGCAA+GGG | + | chr3.3:9906128-9906147 | None:intergenic | 40.0% | |
| GTTACTATAGACGATTGTGG+TGG | - | chr3.3:9906463-9906482 | MS.gene67616:intron | 40.0% | |
| TAATCCTCCAATCCCAACTA+TGG | + | chr3.3:9905627-9905646 | None:intergenic | 40.0% | |
| TCAAGTTAGCAATTGGTTGG+AGG | - | chr3.3:9905223-9905242 | MS.gene67616:CDS | 40.0% | |
| TGCCAATAGTTCTTATGGCA+AGG | + | chr3.3:9906129-9906148 | None:intergenic | 40.0% | |
| TGCTTGTGTTAGATGACATG+TGG | - | chr3.3:9905843-9905862 | MS.gene67616:intron | 40.0% | |
| TGTGCGTGTTATATTTGCCA+CGG | + | chr3.3:9905960-9905979 | None:intergenic | 40.0% | |
| TTAGAGTTTGCAAGTTCGGT+AGG | + | chr3.3:9906879-9906898 | None:intergenic | 40.0% | |
| TTATTCATGGAAGGAGGAAG+AGG | - | chr3.3:9905902-9905921 | MS.gene67616:intron | 40.0% | |
| TTCCAAGACTGTAACAGCAA+GGG | + | chr3.3:9905072-9905091 | None:intergenic | 40.0% | |
| TTTCCAAGACTGTAACAGCA+AGG | + | chr3.3:9905073-9905092 | None:intergenic | 40.0% | |
| ! | CATCCACCCCTTTTCTTAAA+AGG | - | chr3.3:9905980-9905999 | MS.gene67616:intron | 40.0% |
| ! | TGTTTTCTCGAAATTTGGGC+AGG | - | chr3.3:9906155-9906174 | MS.gene67616:intron | 40.0% |
| !! | AAGAAGCACGGCTTTTATCA+TGG | + | chr3.3:9905177-9905196 | None:intergenic | 40.0% |
| !! | CAATGTCAACTAGCCTCTTT+TGG | + | chr3.3:9905421-9905440 | None:intergenic | 40.0% |
| AGTTTGACATGTATGCCACG+GGG | - | chr3.3:9906982-9907001 | MS.gene67616:intron | 45.0% | |
| ATTCCCATAGTTGGGATTGG+AGG | - | chr3.3:9905620-9905639 | MS.gene67616:CDS | 45.0% | |
| CAAGTTCGGTAGGCTAGTAA+TGG | + | chr3.3:9906869-9906888 | None:intergenic | 45.0% | |
| CAATTGGATTCTCCATAGGG+CGG | + | chr3.3:9905475-9905494 | None:intergenic | 45.0% | |
| CATTCAGTTATGGGTAGCTG+AGG | - | chr3.3:9906348-9906367 | MS.gene67616:intron | 45.0% | |
| CCAAGAACTTATGAACAGGG+AGG | - | chr3.3:9907485-9907504 | MS.gene67616:CDS | 45.0% | |
| CCCCTTGCCATAAGAACTAT+TGG | - | chr3.3:9906124-9906143 | MS.gene67616:intron | 45.0% | |
| CCTCCCTGTTCATAAGTTCT+TGG | + | chr3.3:9907488-9907507 | None:intergenic | 45.0% | |
| CTGAGCTAAACAACCTGAGA+GGG | - | chr3.3:9907082-9907101 | MS.gene67616:intron | 45.0% | |
| GAGAGATTCCATATCCAGTC+TGG | + | chr3.3:9907333-9907352 | None:intergenic | 45.0% | |
| GAGTTTGACATGTATGCCAC+GGG | - | chr3.3:9906981-9907000 | MS.gene67616:intron | 45.0% | |
| GTGGCAAAAAGTTACCAGAC+TGG | - | chr3.3:9907316-9907335 | MS.gene67616:CDS | 45.0% | |
| GTTAGATGACATGTGGAACG+AGG | - | chr3.3:9905850-9905869 | MS.gene67616:intron | 45.0% | |
| TCGAGAAGAAAAGTGATGGC+TGG | - | chr3.3:9905305-9905324 | MS.gene67616:CDS | 45.0% | |
| TCTCTGCAGCATTATTTCGC+AGG | + | chr3.3:9907134-9907153 | None:intergenic | 45.0% | |
| TTCAGTTATGGGTAGCTGAG+GGG | - | chr3.3:9906350-9906369 | MS.gene67616:intron | 45.0% | |
| ! | AATTGCCCGTGGCCTTAAAT+TGG | - | chr3.3:9905376-9905395 | MS.gene67616:CDS | 45.0% |
| ! | ATAGCCCAATTTAAGGCCAC+GGG | + | chr3.3:9905384-9905403 | None:intergenic | 45.0% |
| ! | ATTGCCCGTGGCCTTAAATT+GGG | - | chr3.3:9905377-9905396 | MS.gene67616:CDS | 45.0% |
| ! | CACGGCTTTTATCATGGAGA+CGG | + | chr3.3:9905171-9905190 | None:intergenic | 45.0% |
| ! | GATAGCCCAATTTAAGGCCA+CGG | + | chr3.3:9905385-9905404 | None:intergenic | 45.0% |
| ! | TGCGTGTGTTGACACTTTGT+GGG | - | chr3.3:9906746-9906765 | MS.gene67616:intron | 45.0% |
| ! | TTGCGTGTGTTGACACTTTG+TGG | - | chr3.3:9906745-9906764 | MS.gene67616:intron | 45.0% |
| ! | TTTCGAAGTGAGTGGTGATG+TGG | + | chr3.3:9907276-9907295 | None:intergenic | 45.0% |
| ACAGGAGCTATTCTCTCGAG+TGG | - | chr3.3:9906021-9906040 | MS.gene67616:intron | 50.0% | |
| CTTCCTCCATGATCGCATTC+TGG | + | chr3.3:9907227-9907246 | None:intergenic | 50.0% | |
| GAAGCGGCACCTTCAACATT+TGG | - | chr3.3:9907179-9907198 | MS.gene67616:intron | 50.0% | |
| GACCGGGAATGAATATGTCG+TGG | - | chr3.3:9906537-9906556 | MS.gene67616:intron | 50.0% | |
| GCTGAGCTAAACAACCTGAG+AGG | - | chr3.3:9907081-9907100 | MS.gene67616:intron | 50.0% | |
| GCTTCTTGATGCAGAGTCCA+AGG | - | chr3.3:9905190-9905209 | MS.gene67616:CDS | 50.0% | |
| GGACTCTGCATCAAGAAGCA+CGG | + | chr3.3:9905189-9905208 | None:intergenic | 50.0% | |
| GTTTGACATGTATGCCACGG+GGG | - | chr3.3:9906983-9907002 | MS.gene67616:intron | 50.0% | |
| TACAACTCGAAGTCAGACCG+TGG | - | chr3.3:9905940-9905959 | MS.gene67616:CDS | 50.0% | |
| TGTCGACCAGAATGCGATCA+TGG | - | chr3.3:9907218-9907237 | MS.gene67616:intron | 50.0% | |
| !! | AGCCCTTGCTGTTACAGTCT+TGG | - | chr3.3:9905067-9905086 | MS.gene67616:CDS | 50.0% |
| ATCTAGCGCGAGTAGTGACC+GGG | - | chr3.3:9906521-9906540 | MS.gene67616:intron | 55.0% | |
| CGACCAGAATGCGATCATGG+AGG | - | chr3.3:9907221-9907240 | MS.gene67616:intron | 55.0% | |
| GATCTAGCGCGAGTAGTGAC+CGG | - | chr3.3:9906520-9906539 | MS.gene67616:intron | 55.0% | |
| GGAACGAGGATCCTGAGTTG+TGG | - | chr3.3:9905864-9905883 | MS.gene67616:intron | 55.0% | |
| GGTAGGCTAGTAATGGCCAG+AGG | + | chr3.3:9906862-9906881 | None:intergenic | 55.0% | |
| ! | GTGAGTGGTGATGTGGTTGC+AGG | + | chr3.3:9907269-9907288 | None:intergenic | 55.0% |
| ACATGTATGCCACGGGGGCT+AGG | - | chr3.3:9906988-9907007 | MS.gene67616:intron | 60.0% | |
| GCAGCTGAATGACCGCCCTA+TGG | - | chr3.3:9905460-9905479 | MS.gene67616:CDS | 60.0% | |
| GTCAACTGTCCTAGCCCCCG+TGG | + | chr3.3:9907000-9907019 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 9905062 | 9907521 | 9905062 | ID=MS.gene67616 |
| chr3.3 | mRNA | 9905062 | 9907521 | 9905062 | ID=MS.gene67616.t1;Parent=MS.gene67616 |
| chr3.3 | exon | 9907246 | 9907521 | 9907246 | ID=MS.gene67616.t1.exon1;Parent=MS.gene67616.t1 |
| chr3.3 | CDS | 9907246 | 9907521 | 9907246 | ID=cds.MS.gene67616.t1;Parent=MS.gene67616.t1 |
| chr3.3 | exon | 9905911 | 9905968 | 9905911 | ID=MS.gene67616.t1.exon2;Parent=MS.gene67616.t1 |
| chr3.3 | CDS | 9905911 | 9905968 | 9905911 | ID=cds.MS.gene67616.t1;Parent=MS.gene67616.t1 |
| chr3.3 | exon | 9905062 | 9905648 | 9905062 | ID=MS.gene67616.t1.exon3;Parent=MS.gene67616.t1 |
| chr3.3 | CDS | 9905062 | 9905648 | 9905062 | ID=cds.MS.gene67616.t1;Parent=MS.gene67616.t1 |
| Gene Sequence |
| Protein sequence |
