Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68585.t1 | XP_013458374.1 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.70E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68585.t1 | Q94A32 | 72.9 | 107 | 29 | 0 | 123 | 229 | 134 | 240 | 1.3e-37 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68585.t1 | B7FFA9 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.0e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene68585 | -0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene68585 | -0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene04991 | MS.gene68585 | 0.806948 | 6.42E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene68585 | -0.841151 | 5.65E-58 | -1.69E-46 |
| MS.gene050763 | MS.gene68585 | -0.840656 | 7.62E-58 | -1.69E-46 |
| MS.gene054379 | MS.gene68585 | -0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene060084 | MS.gene68585 | -0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene68585 | -0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene060870 | MS.gene68585 | -0.810252 | 1.26E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68585.t1 | MTR_4g123593 | 93.886 | 229 | 13 | 1 | 1 | 229 | 1 | 228 | 7.76e-121 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68585.t1 | AT3G43520 | 69.748 | 119 | 35 | 1 | 111 | 229 | 123 | 240 | 4.17e-51 | 166 |
| MS.gene68585.t1 | AT2G26240 | 63.810 | 105 | 38 | 0 | 124 | 228 | 4 | 108 | 3.63e-38 | 129 |
Find 76 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGTCAAATTGACTGGTTT+TGG | 0.265563 | 8.2:+9440237 | None:intergenic |
| GAAATCAGGGAAGGTCTTTC+CGG | 0.282767 | 8.2:-9437869 | MS.gene68585:CDS |
| GGAGTGTGGGATCGGGTTGT+AGG | 0.296999 | 8.2:+9440358 | None:intergenic |
| GGTTCTCGTTTCAAGAAATC+AGG | 0.336113 | 8.2:-9437883 | MS.gene68585:CDS |
| AAAGGAAACGGAGACGATTT+CGG | 0.340053 | 8.2:-9440172 | MS.gene68585:CDS |
| TTGACAGCGGGTGGTGTAAT+GGG | 0.345679 | 8.2:-9438868 | MS.gene68585:intron |
| TGATGCAAGAACAGGTCTTC+CGG | 0.347788 | 8.2:+9438762 | None:intergenic |
| TTTGACAGCGGGTGGTGTAA+TGG | 0.350276 | 8.2:-9438869 | MS.gene68585:intron |
| TGGCAGCCAGAAGTCGCTTT+TGG | 0.351977 | 8.2:-9438833 | MS.gene68585:CDS |
| AAGGATCTGACGGTGATAAA+AGG | 0.360224 | 8.2:-9440087 | MS.gene68585:CDS |
| GGTGGTGGTGGTGAAGGAGG+AGG | 0.373824 | 8.2:-9440139 | MS.gene68585:CDS |
| GGTGGTGAAGGAGGAGGCGG+AGG | 0.375033 | 8.2:-9440133 | MS.gene68585:CDS |
| TGCTGCACTTCTTGTGGTGA+TGG | 0.380439 | 8.2:-9437905 | MS.gene68585:CDS |
| CCCCAGCCAAAAGCGACTTC+TGG | 0.386183 | 8.2:+9438827 | None:intergenic |
| GCCGCCGGTAATGTCTAAAT+CGG | 0.388850 | 8.2:+9440207 | None:intergenic |
| GGTGGTGGTGAAGGAGGAGG+CGG | 0.392210 | 8.2:-9440136 | MS.gene68585:CDS |
| CCGCCGGTAATGTCTAAATC+GGG | 0.413389 | 8.2:+9440208 | None:intergenic |
| TAGTGGTGGGAGTGTGGGAT+CGG | 0.421797 | 8.2:+9440350 | None:intergenic |
| GACGATTTCGGCGGAGGAGG+TGG | 0.426057 | 8.2:-9440160 | MS.gene68585:CDS |
| CTTGCATCATCTGTGGGCCT+TGG | 0.426584 | 8.2:-9438748 | MS.gene68585:intron |
| GATGCAAGAACAGGTCTTCC+GGG | 0.430490 | 8.2:+9438763 | None:intergenic |
| GAGAAATAGTGGTGGGAGTG+TGG | 0.440353 | 8.2:+9440344 | None:intergenic |
| GCTGCACTTCTTGTGGTGAT+GGG | 0.443502 | 8.2:-9437904 | MS.gene68585:CDS |
| AGCGAGTTGAGAATGTGAAT+TGG | 0.445867 | 8.2:+9440276 | None:intergenic |
| GGCGGAGGAGGTGGTGGTGG+TGG | 0.449465 | 8.2:-9440151 | MS.gene68585:CDS |
| AGTGGTGGGAGTGTGGGATC+GGG | 0.454693 | 8.2:+9440351 | None:intergenic |
| TTCGGCGGAGGAGGTGGTGG+TGG | 0.461763 | 8.2:-9440154 | MS.gene68585:CDS |
| GATTTCGGCGGAGGAGGTGG+TGG | 0.468875 | 8.2:-9440157 | MS.gene68585:CDS |
| GACAAGTAAGGGAAAGAAGC+AGG | 0.472035 | 8.2:+9440304 | None:intergenic |
| GGCACTTAGGTCAAATTGAC+TGG | 0.474158 | 8.2:+9440231 | None:intergenic |
| ACCTGTTCTTGCATCATCTG+TGG | 0.483230 | 8.2:-9438755 | MS.gene68585:CDS |
| AACGGAGACGATTTCGGCGG+AGG | 0.486679 | 8.2:-9440166 | MS.gene68585:CDS |
| AGAAGCAGGAGAAGCAAGGA+AGG | 0.489884 | 8.2:+9440318 | None:intergenic |
| CCCACAGATGATGCAAGAAC+AGG | 0.490656 | 8.2:+9438754 | None:intergenic |
| CTAGGTTATGCTATTCTCGT+TGG | 0.491350 | 8.2:-9440031 | MS.gene68585:CDS |
| AAGGAAGGAGCGAGAAATAG+TGG | 0.498256 | 8.2:+9440333 | None:intergenic |
| AACAGGTCTTCCGGGTAGCT+CGG | 0.505808 | 8.2:+9438771 | None:intergenic |
| TTTGATATCACCGCCGCCGC+CGG | 0.506217 | 8.2:+9440192 | None:intergenic |
| TTAGACATTACCGGCGGCGG+CGG | 0.514783 | 8.2:-9440202 | MS.gene68585:CDS |
| GGTTATGCTATTCTCGTTGG+AGG | 0.515433 | 8.2:-9440028 | MS.gene68585:intron |
| CCTGTTCTTGCATCATCTGT+GGG | 0.521720 | 8.2:-9438754 | MS.gene68585:CDS |
| GGAGACGATTTCGGCGGAGG+AGG | 0.526381 | 8.2:-9440163 | MS.gene68585:CDS |
| GAGTGTGGGATCGGGTTGTA+GGG | 0.536706 | 8.2:+9440359 | None:intergenic |
| GGCGGTGATATCAAAGGAAA+CGG | 0.540755 | 8.2:-9440184 | MS.gene68585:CDS |
| GATAGTAACAAAGGCGAGGA+AGG | 0.548487 | 8.2:-9440106 | MS.gene68585:CDS |
| CATATCTGCTGCACTTCTTG+TGG | 0.550309 | 8.2:-9437911 | MS.gene68585:CDS |
| AAGGAGCGAGAAATAGTGGT+GGG | 0.557007 | 8.2:+9440337 | None:intergenic |
| TCAGGGAAGGTCTTTCCGGC+AGG | 0.561022 | 8.2:-9437865 | MS.gene68585:CDS |
| CTTGTGTCGTTCATAATGAC+CGG | 0.562716 | 8.2:-9437832 | MS.gene68585:CDS |
| ACAAGTGACACAACACCTGC+CGG | 0.564042 | 8.2:+9437850 | None:intergenic |
| AGAAATAGTGGTGGGAGTGT+GGG | 0.564262 | 8.2:+9440345 | None:intergenic |
| GGTTGTAGGGCGAAGAGAGA+GGG | 0.564448 | 8.2:+9440372 | None:intergenic |
| ATGACCGGTGGTTACTTGCA+TGG | 0.564829 | 8.2:-9437817 | MS.gene68585:CDS |
| GTAGGGCGAAGAGAGAGGGA+AGG | 0.571612 | 8.2:+9440376 | None:intergenic |
| TGACGGTGATAAAAGGAAGA+TGG | 0.578241 | 8.2:-9440080 | MS.gene68585:CDS |
| ATGTCGCAGAAATTAACTCT+AGG | 0.581649 | 8.2:-9440049 | MS.gene68585:CDS |
| GAATTGGAAAGAGACAAGTA+AGG | 0.589380 | 8.2:+9440292 | None:intergenic |
| GATTTAGACATTACCGGCGG+CGG | 0.591983 | 8.2:-9440205 | MS.gene68585:CDS |
| CGCCGGTAATGTCTAAATCG+GGG | 0.604362 | 8.2:+9440209 | None:intergenic |
| GGAAAGAAGCAGGAGAAGCA+AGG | 0.608774 | 8.2:+9440314 | None:intergenic |
| AATTGGAAAGAGACAAGTAA+GGG | 0.611539 | 8.2:+9440293 | None:intergenic |
| GGCGGCGGCGGTGATATCAA+AGG | 0.624581 | 8.2:-9440190 | MS.gene68585:CDS |
| GTTCTCGTTTCAAGAAATCA+GGG | 0.628947 | 8.2:-9437882 | MS.gene68585:CDS |
| TCGTTTCAAGAAATCAGGGA+AGG | 0.630412 | 8.2:-9437878 | MS.gene68585:CDS |
| GCCGGTAATGTCTAAATCGG+GGG | 0.634119 | 8.2:+9440210 | None:intergenic |
| GTAATGGGCTTTCTGAAGAG+TGG | 0.639725 | 8.2:-9438853 | MS.gene68585:CDS |
| AATTCCATGCAAGTAACCAC+CGG | 0.644415 | 8.2:+9437813 | None:intergenic |
| AAAGGCGAGGAAGGATCTGA+CGG | 0.645896 | 8.2:-9440097 | MS.gene68585:CDS |
| AGACGATAGTAACAAAGGCG+AGG | 0.650186 | 8.2:-9440110 | MS.gene68585:CDS |
| GAAGGAGCGAGAAATAGTGG+TGG | 0.655482 | 8.2:+9440336 | None:intergenic |
| CCCGATTTAGACATTACCGG+CGG | 0.658939 | 8.2:-9440208 | MS.gene68585:CDS |
| GGAGGAGACGATAGTAACAA+AGG | 0.659434 | 8.2:-9440115 | MS.gene68585:CDS |
| GGGTTGTAGGGCGAAGAGAG+AGG | 0.659984 | 8.2:+9440371 | None:intergenic |
| GTGTCGTTCATAATGACCGG+TGG | 0.667012 | 8.2:-9437829 | MS.gene68585:CDS |
| GTCAATGGCAGAAACTGCAG+CGG | 0.675091 | 8.2:-9440425 | None:intergenic |
| GGAAACGGAGACGATTTCGG+CGG | 0.728758 | 8.2:-9440169 | MS.gene68585:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAATTATTTAACA+TGG | - | chr8.2:9439648-9439667 | MS.gene68585:intron | 10.0% |
| !!! | TTTATTTTGGAATATTATTT+TGG | - | chr8.2:9440109-9440128 | MS.gene68585:CDS | 10.0% |
| !! | AAAAAATTATTTAACATGGA+TGG | - | chr8.2:9439652-9439671 | MS.gene68585:intron | 15.0% |
| !! | CTACATAATGATATTTATTT+GGG | - | chr8.2:9439323-9439342 | MS.gene68585:intron | 15.0% |
| !! | TAATATTCCAAAATAAATTC+AGG | + | chr8.2:9440106-9440125 | None:intergenic | 15.0% |
| !! | TCTACATAATGATATTTATT+TGG | - | chr8.2:9439322-9439341 | MS.gene68585:intron | 15.0% |
| !! | TTTCTTATGTTAGTTATTTA+AGG | - | chr8.2:9438394-9438413 | MS.gene68585:intron | 15.0% |
| !! | ATAAACTGGAATAAATTGTA+TGG | - | chr8.2:9439002-9439021 | MS.gene68585:intron | 20.0% |
| !! | ATAGATAAGTGTTTATAAGT+GGG | + | chr8.2:9438844-9438863 | None:intergenic | 20.0% |
| !! | GATATTTGACAACATTAAAT+TGG | - | chr8.2:9439128-9439147 | MS.gene68585:intron | 20.0% |
| !!! | AGTTTTTTATCCATACTTTA+AGG | - | chr8.2:9439840-9439859 | MS.gene68585:intron | 20.0% |
| !!! | TTCTAAAAAACCTTAAAGTA+TGG | + | chr8.2:9439853-9439872 | None:intergenic | 20.0% |
| ! | AATTCCTCCATATAATATTG+CGG | - | chr8.2:9438594-9438613 | MS.gene68585:intron | 25.0% |
| ! | ATTATCGTCGTTATCAAATA+TGG | + | chr8.2:9440042-9440061 | None:intergenic | 25.0% |
| ! | CATAGATAAGTGTTTATAAG+TGG | + | chr8.2:9438845-9438864 | None:intergenic | 25.0% |
| ! | GAAATAAAATCTCACAAAAC+CGG | - | chr8.2:9438798-9438817 | MS.gene68585:CDS | 25.0% |
| ! | TAGATAAGTGTTTATAAGTG+GGG | + | chr8.2:9438843-9438862 | None:intergenic | 25.0% |
| ! | TAGTTATAGATCAGTTTCTA+GGG | + | chr8.2:9438260-9438279 | None:intergenic | 25.0% |
| ! | TCTTAAAGTCTTAAGAACAA+AGG | - | chr8.2:9439605-9439624 | MS.gene68585:intron | 25.0% |
| ! | TTAGTTATAGATCAGTTTCT+AGG | + | chr8.2:9438261-9438280 | None:intergenic | 25.0% |
| !! | GAATAAACTCTTTTACTGTT+GGG | - | chr8.2:9439552-9439571 | MS.gene68585:intron | 25.0% |
| !! | TGAATAAACTCTTTTACTGT+TGG | - | chr8.2:9439551-9439570 | MS.gene68585:intron | 25.0% |
| !!! | GTTTTGAATTTACCTTCAAT+TGG | - | chr8.2:9438294-9438313 | MS.gene68585:intron | 25.0% |
| AAACATTAACACATGAGAGA+AGG | + | chr8.2:9440262-9440281 | None:intergenic | 30.0% | |
| AATATGAAGTGTAGAGTTCA+GGG | + | chr8.2:9439806-9439825 | None:intergenic | 30.0% | |
| AATTGGAAAGAGACAAGTAA+GGG | + | chr8.2:9437926-9437945 | None:intergenic | 30.0% | |
| AATTGTATGGAAATTCCATG+TGG | - | chr8.2:9439015-9439034 | MS.gene68585:intron | 30.0% | |
| AGATAAGTGTTTATAAGTGG+GGG | + | chr8.2:9438842-9438861 | None:intergenic | 30.0% | |
| AGTTAGAATGAAGAACATGT+TGG | - | chr8.2:9438320-9438339 | MS.gene68585:intron | 30.0% | |
| ATTGTATGGAAATTCCATGT+GGG | - | chr8.2:9439016-9439035 | MS.gene68585:intron | 30.0% | |
| GCAAACTCTTTATGAGTTTA+CGG | - | chr8.2:9440138-9440157 | MS.gene68585:CDS | 30.0% | |
| GGAATTTCATATGTATCAGA+AGG | - | chr8.2:9439626-9439645 | MS.gene68585:intron | 30.0% | |
| GTAAAAGAGTTTATTCAGAC+AGG | + | chr8.2:9439548-9439567 | None:intergenic | 30.0% | |
| TAATATGAAGTGTAGAGTTC+AGG | + | chr8.2:9439807-9439826 | None:intergenic | 30.0% | |
| TATGTTGCAAATTGTTCAAC+TGG | - | chr8.2:9439903-9439922 | MS.gene68585:intron | 30.0% | |
| ! | GTGAATTGTAAAGCATTCTT+TGG | - | chr8.2:9439776-9439795 | MS.gene68585:intron | 30.0% |
| !! | ATTTATTTGGGTTTTGACAG+CGG | - | chr8.2:9439335-9439354 | MS.gene68585:intron | 30.0% |
| !! | GATCATTTTTCCTGATGTAT+AGG | - | chr8.2:9440282-9440301 | MS.gene68585:CDS | 30.0% |
| !! | GTTTCTTTGCTTTGAAGTTT+AGG | - | chr8.2:9440005-9440024 | MS.gene68585:intron | 30.0% |
| !!! | AACATGTTTTGTTTGTGTTG+TGG | - | chr8.2:9438968-9438987 | MS.gene68585:intron | 30.0% |
| !!! | ACATGTTTTGTTTGTGTTGT+GGG | - | chr8.2:9438969-9438988 | MS.gene68585:intron | 30.0% |
| ACAATGATGCATCATTCCAT+TGG | - | chr8.2:9439937-9439956 | MS.gene68585:intron | 35.0% | |
| ACATAGCCATGTCTAAATTC+TGG | - | chr8.2:9439740-9439759 | MS.gene68585:intron | 35.0% | |
| AGACTCTTTAACAGATAGTG+AGG | - | chr8.2:9438884-9438903 | MS.gene68585:intron | 35.0% | |
| ATATGAAGTGTAGAGTTCAG+GGG | + | chr8.2:9439805-9439824 | None:intergenic | 35.0% | |
| ATGTCGCAGAAATTAACTCT+AGG | - | chr8.2:9438167-9438186 | MS.gene68585:intron | 35.0% | |
| ATTCTAACTCAGCCAATTGA+AGG | + | chr8.2:9438309-9438328 | None:intergenic | 35.0% | |
| CATAATTCGTTTGATGCCTT+TGG | + | chr8.2:9439887-9439906 | None:intergenic | 35.0% | |
| GAATTGGAAAGAGACAAGTA+AGG | + | chr8.2:9437927-9437946 | None:intergenic | 35.0% | |
| GAGAAGACTGATACAACTAT+TGG | + | chr8.2:9438558-9438577 | None:intergenic | 35.0% | |
| GATGTCAAATATCTTTGTGG+AGG | - | chr8.2:9439059-9439078 | MS.gene68585:intron | 35.0% | |
| GCAAATTGTTCAACTGGTTA+TGG | - | chr8.2:9439909-9439928 | MS.gene68585:intron | 35.0% | |
| GTTCTCGTTTCAAGAAATCA+GGG | - | chr8.2:9440334-9440353 | MS.gene68585:CDS | 35.0% | |
| TAGAACCTACCATTTACCAA+AGG | - | chr8.2:9439868-9439887 | MS.gene68585:intron | 35.0% | |
| TCCCCACTGTTCAAAATTTA+TGG | + | chr8.2:9438653-9438672 | None:intergenic | 35.0% | |
| TGGGGGAAATCAAAATAAAC+TGG | - | chr8.2:9438988-9439007 | MS.gene68585:intron | 35.0% | |
| TGTATCAGTCTTCTCAATAG+TGG | - | chr8.2:9438563-9438582 | MS.gene68585:intron | 35.0% | |
| ! | ATCAATTCTAGTTGCTCACA+AGG | + | chr8.2:9440208-9440227 | None:intergenic | 35.0% |
| ! | CTCGCTTCCTGAATTTATTT+TGG | - | chr8.2:9440096-9440115 | MS.gene68585:CDS | 35.0% |
| ! | GCCATAAATTTTGAACAGTG+GGG | - | chr8.2:9438649-9438668 | MS.gene68585:intron | 35.0% |
| ! | GGCCATAAATTTTGAACAGT+GGG | - | chr8.2:9438648-9438667 | MS.gene68585:intron | 35.0% |
| !! | TTTATTTGGGTTTTGACAGC+GGG | - | chr8.2:9439336-9439355 | MS.gene68585:intron | 35.0% |
| !! | TTTTTCGATTCCATGAAACG+AGG | - | chr8.2:9438717-9438736 | MS.gene68585:intron | 35.0% |
| !!! | ATGTTTTGTTTGTGTTGTGG+GGG | - | chr8.2:9438971-9438990 | MS.gene68585:intron | 35.0% |
| !!! | CATGTTTTGTTTGTGTTGTG+GGG | - | chr8.2:9438970-9438989 | MS.gene68585:intron | 35.0% |
| !!! | TAGGTCAAATTGACTGGTTT+TGG | + | chr8.2:9437982-9438001 | None:intergenic | 35.0% |
| AAAGGAAACGGAGACGATTT+CGG | - | chr8.2:9438044-9438063 | MS.gene68585:intron | 40.0% | |
| AAGGATCTGACGGTGATAAA+AGG | - | chr8.2:9438129-9438148 | MS.gene68585:intron | 40.0% | |
| AATTCCATGCAAGTAACCAC+CGG | + | chr8.2:9440406-9440425 | None:intergenic | 40.0% | |
| ACCATTGCACGAAATTTGTC+TGG | - | chr8.2:9438673-9438692 | MS.gene68585:intron | 40.0% | |
| AGAAAGAGATGATCGTAGGT+GGG | - | chr8.2:9438771-9438790 | MS.gene68585:CDS | 40.0% | |
| AGAGAGAAAGAGATGATCGT+AGG | - | chr8.2:9438767-9438786 | MS.gene68585:CDS | 40.0% | |
| AGAGCACAATTGTGTACCAA+TGG | + | chr8.2:9439956-9439975 | None:intergenic | 40.0% | |
| AGCAGATATGCCTATACATC+AGG | + | chr8.2:9440295-9440314 | None:intergenic | 40.0% | |
| AGTGCCGCAATATTATATGG+AGG | + | chr8.2:9438601-9438620 | None:intergenic | 40.0% | |
| ATTGCACGAAATTTGTCTGG+AGG | - | chr8.2:9438676-9438695 | MS.gene68585:intron | 40.0% | |
| CAACCTCCAGAATTTAGACA+TGG | + | chr8.2:9439749-9439768 | None:intergenic | 40.0% | |
| CGTTTGATGCCTTTGGTAAA+TGG | + | chr8.2:9439880-9439899 | None:intergenic | 40.0% | |
| CTAGGTTATGCTATTCTCGT+TGG | - | chr8.2:9438185-9438204 | MS.gene68585:intron | 40.0% | |
| CTTTAACAGATAGTGAGGCA+GGG | - | chr8.2:9438889-9438908 | MS.gene68585:intron | 40.0% | |
| GAGCTAGAAAAATTCCACAC+TGG | + | chr8.2:9440079-9440098 | None:intergenic | 40.0% | |
| GGGGATGTCAAATATCTTTG+TGG | - | chr8.2:9439056-9439075 | MS.gene68585:intron | 40.0% | |
| GGTTCTCGTTTCAAGAAATC+AGG | - | chr8.2:9440333-9440352 | MS.gene68585:CDS | 40.0% | |
| TAGCCATGTCTAAATTCTGG+AGG | - | chr8.2:9439743-9439762 | MS.gene68585:intron | 40.0% | |
| TCAAATATCTTTGTGGAGGC+AGG | - | chr8.2:9439063-9439082 | MS.gene68585:intron | 40.0% | |
| TCCAGACAAATTTCGTGCAA+TGG | + | chr8.2:9438677-9438696 | None:intergenic | 40.0% | |
| TCGTTTCAAGAAATCAGGGA+AGG | - | chr8.2:9440338-9440357 | MS.gene68585:CDS | 40.0% | |
| TCTGTTAAAGAGTCTCACCT+CGG | + | chr8.2:9438879-9438898 | None:intergenic | 40.0% | |
| TCTTTAACAGATAGTGAGGC+AGG | - | chr8.2:9438888-9438907 | MS.gene68585:intron | 40.0% | |
| TGACGGTGATAAAAGGAAGA+TGG | - | chr8.2:9438136-9438155 | MS.gene68585:intron | 40.0% | |
| TGATGCCTTTGGTAAATGGT+AGG | + | chr8.2:9439876-9439895 | None:intergenic | 40.0% | |
| TGGTACACAATTGTGCTCTT+TGG | - | chr8.2:9439957-9439976 | MS.gene68585:intron | 40.0% | |
| TTGCACGAAATTTGTCTGGA+GGG | - | chr8.2:9438677-9438696 | MS.gene68585:intron | 40.0% | |
| ! | AGCGAGTTGAGAATGTGAAT+TGG | + | chr8.2:9437943-9437962 | None:intergenic | 40.0% |
| ! | CTTGTGTCGTTCATAATGAC+CGG | - | chr8.2:9440384-9440403 | MS.gene68585:CDS | 40.0% |
| ! | GGGCCATAAATTTTGAACAG+TGG | - | chr8.2:9438647-9438666 | MS.gene68585:intron | 40.0% |
| !! | TATGTTTTTACCGAGCTACC+CGG | - | chr8.2:9439435-9439454 | MS.gene68585:intron | 40.0% |
| AAGGAAGGAGCGAGAAATAG+TGG | + | chr8.2:9437886-9437905 | None:intergenic | 45.0% | |
| AAGGAGCGAGAAATAGTGGT+GGG | + | chr8.2:9437882-9437901 | None:intergenic | 45.0% | |
| AATTTGTCTGGAGGGAGAGT+TGG | - | chr8.2:9438685-9438704 | MS.gene68585:intron | 45.0% | |
| ACCATACTTGTCTACCCACA+TGG | + | chr8.2:9439033-9439052 | None:intergenic | 45.0% | |
| ACCTGTTCTTGCATCATCTG+TGG | - | chr8.2:9439461-9439480 | MS.gene68585:intron | 45.0% | |
| AGACGATAGTAACAAAGGCG+AGG | - | chr8.2:9438106-9438125 | MS.gene68585:intron | 45.0% | |
| CACTGCCATCCTTCACTAAT+TGG | - | chr8.2:9438617-9438636 | MS.gene68585:intron | 45.0% | |
| CATATCTGCTGCACTTCTTG+TGG | - | chr8.2:9440305-9440324 | MS.gene68585:CDS | 45.0% | |
| CCTGTTCTTGCATCATCTGT+GGG | - | chr8.2:9439462-9439481 | MS.gene68585:intron | 45.0% | |
| CGATTCCATGAAACGAGGAA+GGG | - | chr8.2:9438722-9438741 | MS.gene68585:intron | 45.0% | |
| GAAAACCCTTCCTCGTTTCA+TGG | + | chr8.2:9438730-9438749 | None:intergenic | 45.0% | |
| GAAATCAGGGAAGGTCTTTC+CGG | - | chr8.2:9440347-9440366 | MS.gene68585:CDS | 45.0% | |
| GACAAGTAAGGGAAAGAAGC+AGG | + | chr8.2:9437915-9437934 | None:intergenic | 45.0% | |
| GAGAAAGAGATGATCGTAGG+TGG | - | chr8.2:9438770-9438789 | MS.gene68585:CDS | 45.0% | |
| GATAGTAACAAAGGCGAGGA+AGG | - | chr8.2:9438110-9438129 | MS.gene68585:intron | 45.0% | |
| GCAATATACACCTCACATGC+CGG | + | chr8.2:9438820-9438839 | None:intergenic | 45.0% | |
| GGAGGAGACGATAGTAACAA+AGG | - | chr8.2:9438101-9438120 | MS.gene68585:intron | 45.0% | |
| GGCACTTAGGTCAAATTGAC+TGG | + | chr8.2:9437988-9438007 | None:intergenic | 45.0% | |
| GGCAGTGCCGCAATATTATA+TGG | + | chr8.2:9438604-9438623 | None:intergenic | 45.0% | |
| GGCGGTGATATCAAAGGAAA+CGG | - | chr8.2:9438032-9438051 | MS.gene68585:intron | 45.0% | |
| GGTTATGCTATTCTCGTTGG+AGG | - | chr8.2:9438188-9438207 | MS.gene68585:intron | 45.0% | |
| GTGGGTAGACAAGTATGGTA+GGG | - | chr8.2:9439034-9439053 | MS.gene68585:intron | 45.0% | |
| TCAAATATCTGCCACCACAG+TGG | + | chr8.2:9439117-9439136 | None:intergenic | 45.0% | |
| TCCATGTGGGTAGACAAGTA+TGG | - | chr8.2:9439029-9439048 | MS.gene68585:intron | 45.0% | |
| TCGATTCCATGAAACGAGGA+AGG | - | chr8.2:9438721-9438740 | MS.gene68585:intron | 45.0% | |
| TCTATGTCATCTCTCAACCG+AGG | - | chr8.2:9438859-9438878 | MS.gene68585:CDS | 45.0% | |
| TGATGCAAGAACAGGTCTTC+CGG | + | chr8.2:9439457-9439476 | None:intergenic | 45.0% | |
| TGCCATCCTTCACTAATTGG+CGG | - | chr8.2:9438620-9438639 | MS.gene68585:intron | 45.0% | |
| TGGCTATGTTTCAGCCTTAG+CGG | + | chr8.2:9439729-9439748 | None:intergenic | 45.0% | |
| TGGGTAGACAAGTATGGTAG+GGG | - | chr8.2:9439035-9439054 | MS.gene68585:intron | 45.0% | |
| TGTGGGTAGACAAGTATGGT+AGG | - | chr8.2:9439033-9439052 | MS.gene68585:intron | 45.0% | |
| ! | AGAAATAGTGGTGGGAGTGT+GGG | + | chr8.2:9437874-9437893 | None:intergenic | 45.0% |
| ! | TTTAGCACTGAAGTCCAGTG+TGG | - | chr8.2:9440062-9440081 | MS.gene68585:CDS | 45.0% |
| !! | GTAATGGGCTTTCTGAAGAG+TGG | - | chr8.2:9439363-9439382 | MS.gene68585:intron | 45.0% |
| AAAGGCGAGGAAGGATCTGA+CGG | - | chr8.2:9438119-9438138 | MS.gene68585:intron | 50.0% | |
| AATATCTGCCACCACAGTGG+TGG | + | chr8.2:9439114-9439133 | None:intergenic | 50.0% | |
| ACAAGTGACACAACACCTGC+CGG | + | chr8.2:9440369-9440388 | None:intergenic | 50.0% | |
| AGAAGCAGGAGAAGCAAGGA+AGG | + | chr8.2:9437901-9437920 | None:intergenic | 50.0% | |
| AGCCAGACACAAGGTTGTGT+GGG | + | chr8.2:9439091-9439110 | None:intergenic | 50.0% | |
| AGCTCAGCAGTGACTTACCA+AGG | + | chr8.2:9439488-9439507 | None:intergenic | 50.0% | |
| ATGACCGGTGGTTACTTGCA+TGG | - | chr8.2:9440399-9440418 | MS.gene68585:CDS | 50.0% | |
| CACCGCCAATTAGTGAAGGA+TGG | + | chr8.2:9438625-9438644 | None:intergenic | 50.0% | |
| CCCACAGATGATGCAAGAAC+AGG | + | chr8.2:9439465-9439484 | None:intergenic | 50.0% | |
| CCCGATTTAGACATTACCGG+CGG | - | chr8.2:9438008-9438027 | MS.gene68585:intron | 50.0% | |
| CCGCCGGTAATGTCTAAATC+GGG | + | chr8.2:9438011-9438030 | None:intergenic | 50.0% | |
| CGCCGGTAATGTCTAAATCG+GGG | + | chr8.2:9438010-9438029 | None:intergenic | 50.0% | |
| CTTCACTAATTGGCGGTGCA+GGG | - | chr8.2:9438627-9438646 | MS.gene68585:intron | 50.0% | |
| GAAGGAGCGAGAAATAGTGG+TGG | + | chr8.2:9437883-9437902 | None:intergenic | 50.0% | |
| GATGCAAGAACAGGTCTTCC+GGG | + | chr8.2:9439456-9439475 | None:intergenic | 50.0% | |
| GATTTAGACATTACCGGCGG+CGG | - | chr8.2:9438011-9438030 | MS.gene68585:intron | 50.0% | |
| GCCCCCGATTTAGACATTAC+CGG | - | chr8.2:9438005-9438024 | MS.gene68585:intron | 50.0% | |
| GCCGCCGGTAATGTCTAAAT+CGG | + | chr8.2:9438012-9438031 | None:intergenic | 50.0% | |
| GCCGGTAATGTCTAAATCGG+GGG | + | chr8.2:9438009-9438028 | None:intergenic | 50.0% | |
| GCTGCACTTCTTGTGGTGAT+GGG | - | chr8.2:9440312-9440331 | MS.gene68585:CDS | 50.0% | |
| GGAAAGAAGCAGGAGAAGCA+AGG | + | chr8.2:9437905-9437924 | None:intergenic | 50.0% | |
| GGCTATGTTTCAGCCTTAGC+GGG | + | chr8.2:9439728-9439747 | None:intergenic | 50.0% | |
| GGGTAGACAAGTATGGTAGG+GGG | - | chr8.2:9439036-9439055 | MS.gene68585:intron | 50.0% | |
| GGTAGACAAGTATGGTAGGG+GGG | - | chr8.2:9439037-9439056 | MS.gene68585:intron | 50.0% | |
| TCTCACAAAACCGGCATGTG+AGG | - | chr8.2:9438807-9438826 | MS.gene68585:CDS | 50.0% | |
| TCTTGAGTTTCTGCCCGCTA+AGG | - | chr8.2:9439712-9439731 | MS.gene68585:intron | 50.0% | |
| TGCTGCACTTCTTGTGGTGA+TGG | - | chr8.2:9440311-9440330 | MS.gene68585:CDS | 50.0% | |
| TTGACAGCGGGTGGTGTAAT+GGG | - | chr8.2:9439348-9439367 | MS.gene68585:intron | 50.0% | |
| TTTGACAGCGGGTGGTGTAA+TGG | - | chr8.2:9439347-9439366 | MS.gene68585:intron | 50.0% | |
| ! | GAGAAATAGTGGTGGGAGTG+TGG | + | chr8.2:9437875-9437894 | None:intergenic | 50.0% |
| ! | GCAGAAACTGCAGCGGTTTT+CGG | - | chr8.2:9437798-9437817 | MS.gene68585:CDS | 50.0% |
| ! | GTGTCGTTCATAATGACCGG+TGG | - | chr8.2:9440387-9440406 | MS.gene68585:CDS | 50.0% |
| !! | ATTTGGGTTTTGACAGCGGG+TGG | - | chr8.2:9439339-9439358 | MS.gene68585:intron | 50.0% |
| !! | TGTCTAAATCGGGGGCACTT+AGG | + | chr8.2:9438001-9438020 | None:intergenic | 50.0% |
| AACAGGTCTTCCGGGTAGCT+CGG | + | chr8.2:9439448-9439467 | None:intergenic | 55.0% | |
| AGCCCACACAACCTTGTGTC+TGG | - | chr8.2:9439086-9439105 | MS.gene68585:intron | 55.0% | |
| CCTGCACCGCCAATTAGTGA+AGG | + | chr8.2:9438629-9438648 | None:intergenic | 55.0% | |
| CCTTCACTAATTGGCGGTGC+AGG | - | chr8.2:9438626-9438645 | MS.gene68585:intron | 55.0% | |
| CTTGCATCATCTGTGGGCCT+TGG | - | chr8.2:9439468-9439487 | MS.gene68585:intron | 55.0% | |
| GAGCCAGACACAAGGTTGTG+TGG | + | chr8.2:9439092-9439111 | None:intergenic | 55.0% | |
| GGAAACGGAGACGATTTCGG+CGG | - | chr8.2:9438047-9438066 | MS.gene68585:intron | 55.0% | |
| GGTTGTAGGGCGAAGAGAGA+GGG | + | chr8.2:9437847-9437866 | None:intergenic | 55.0% | |
| ! | GAGTGTGGGATCGGGTTGTA+GGG | + | chr8.2:9437860-9437879 | None:intergenic | 55.0% |
| ! | TAGTGGTGGGAGTGTGGGAT+CGG | + | chr8.2:9437869-9437888 | None:intergenic | 55.0% |
| !! | TGGCAGCCAGAAGTCGCTTT+TGG | - | chr8.2:9439383-9439402 | MS.gene68585:intron | 55.0% |
| !!! | AGCCAGAAGTCGCTTTTGGC+TGG | - | chr8.2:9439387-9439406 | MS.gene68585:intron | 55.0% |
| !!! | CAGAAGTCGCTTTTGGCTGG+GGG | - | chr8.2:9439390-9439409 | MS.gene68585:intron | 55.0% |
| !!! | CCAGAAGTCGCTTTTGGCTG+GGG | - | chr8.2:9439389-9439408 | MS.gene68585:intron | 55.0% |
| !!! | GCCAGAAGTCGCTTTTGGCT+GGG | - | chr8.2:9439388-9439407 | MS.gene68585:intron | 55.0% |
| AACGGAGACGATTTCGGCGG+AGG | - | chr8.2:9438050-9438069 | MS.gene68585:intron | 60.0% | |
| CCCCAGCCAAAAGCGACTTC+TGG | + | chr8.2:9439392-9439411 | None:intergenic | 60.0% | |
| GGGTTGTAGGGCGAAGAGAG+AGG | + | chr8.2:9437848-9437867 | None:intergenic | 60.0% | |
| GTAGGGCGAAGAGAGAGGGA+AGG | + | chr8.2:9437843-9437862 | None:intergenic | 60.0% | |
| TCAGGGAAGGTCTTTCCGGC+AGG | - | chr8.2:9440351-9440370 | MS.gene68585:CDS | 60.0% | |
| TTAGACATTACCGGCGGCGG+CGG | - | chr8.2:9438014-9438033 | MS.gene68585:intron | 60.0% | |
| TTTGATATCACCGCCGCCGC+CGG | + | chr8.2:9438027-9438046 | None:intergenic | 60.0% | |
| ! | AGTGGTGGGAGTGTGGGATC+GGG | + | chr8.2:9437868-9437887 | None:intergenic | 60.0% |
| ! | CAGTGGTGGAGCCAGACACA+AGG | + | chr8.2:9439100-9439119 | None:intergenic | 60.0% |
| ! | GGAGTGTGGGATCGGGTTGT+AGG | + | chr8.2:9437861-9437880 | None:intergenic | 60.0% |
| ! | TGTGTCTGGCTCCACCACTG+TGG | - | chr8.2:9439100-9439119 | MS.gene68585:intron | 60.0% |
| !! | GTCTGGAGGGAGAGTTGGTG+TGG | - | chr8.2:9438690-9438709 | MS.gene68585:intron | 60.0% |
| GACGATTTCGGCGGAGGAGG+TGG | - | chr8.2:9438056-9438075 | MS.gene68585:intron | 65.0% | |
| GATTTCGGCGGAGGAGGTGG+TGG | - | chr8.2:9438059-9438078 | MS.gene68585:intron | 65.0% | |
| GGAGACGATTTCGGCGGAGG+AGG | - | chr8.2:9438053-9438072 | MS.gene68585:intron | 65.0% | |
| GGCGGCGGCGGTGATATCAA+AGG | - | chr8.2:9438026-9438045 | MS.gene68585:intron | 65.0% | |
| ! | GGTGGTGGTGAAGGAGGAGG+CGG | - | chr8.2:9438080-9438099 | MS.gene68585:intron | 65.0% |
| ! | GTCTGGCTCCACCACTGTGG+TGG | - | chr8.2:9439103-9439122 | MS.gene68585:intron | 65.0% |
| !! | GGAGGTGGTGGTGGTGGTGA+AGG | - | chr8.2:9438071-9438090 | MS.gene68585:intron | 65.0% |
| !! | GGTGGTGGTGGTGAAGGAGG+AGG | - | chr8.2:9438077-9438096 | MS.gene68585:intron | 65.0% |
| !! | GGTGGTGGTGGTGGTGAAGG+AGG | - | chr8.2:9438074-9438093 | MS.gene68585:intron | 65.0% |
| GGTGGTGAAGGAGGAGGCGG+AGG | - | chr8.2:9438083-9438102 | MS.gene68585:intron | 70.0% | |
| ! | TTCGGCGGAGGAGGTGGTGG+TGG | - | chr8.2:9438062-9438081 | MS.gene68585:intron | 70.0% |
| !! | GGCGGAGGAGGTGGTGGTGG+TGG | - | chr8.2:9438065-9438084 | MS.gene68585:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 9437795 | 9440443 | 9437795 | ID=MS.gene68585 |
| chr8.2 | mRNA | 9437795 | 9440443 | 9437795 | ID=MS.gene68585.t1;Parent=MS.gene68585 |
| chr8.2 | exon | 9440029 | 9440443 | 9440029 | ID=MS.gene68585.t1.exon1;Parent=MS.gene68585.t1 |
| chr8.2 | CDS | 9440029 | 9440443 | 9440029 | ID=cds.MS.gene68585.t1;Parent=MS.gene68585.t1 |
| chr8.2 | exon | 9438749 | 9438883 | 9438749 | ID=MS.gene68585.t1.exon2;Parent=MS.gene68585.t1 |
| chr8.2 | CDS | 9438749 | 9438883 | 9438749 | ID=cds.MS.gene68585.t1;Parent=MS.gene68585.t1 |
| chr8.2 | exon | 9437795 | 9437934 | 9437795 | ID=MS.gene68585.t1.exon3;Parent=MS.gene68585.t1 |
| chr8.2 | CDS | 9437795 | 9437934 | 9437795 | ID=cds.MS.gene68585.t1;Parent=MS.gene68585.t1 |
| Gene Sequence |
| Protein sequence |
