Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056400.t1 | XP_003606813.1 | 89.9 | 414 | 41 | 1 | 1 | 413 | 1 | 414 | 3.10E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056400.t1 | Q8VYD3 | 47.3 | 412 | 181 | 5 | 1 | 412 | 1 | 376 | 6.3e-86 | 319.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056400.t1 | G7JEV2 | 89.9 | 414 | 41 | 1 | 1 | 413 | 1 | 414 | 2.2e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene056400 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene04984 | MS.gene056400 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene056400 | -0.821818 | 3.30E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene056400 | 0.822317 | 2.53E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene056400 | 0.823349 | 1.45E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene056400 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene058182 | 0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene056400 | MS.gene060084 | 0.835412 | 1.70E-56 | -1.69E-46 |
| MS.gene056400 | MS.gene063498 | 0.803786 | 2.95E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene063770 | 0.83831 | 3.10E-57 | -1.69E-46 |
| MS.gene056400 | MS.gene067029 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene071438 | -0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene072564 | 0.82378 | 1.15E-53 | -1.69E-46 |
| MS.gene056400 | MS.gene072565 | 0.82597 | 3.51E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene08608 | 0.817531 | 3.14E-52 | -1.69E-46 |
| MS.gene056400 | MS.gene09136 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene056400 | MS.gene28322 | 0.904593 | 1.04E-79 | -1.69E-46 |
| MS.gene056400 | MS.gene31059 | 0.825426 | 4.72E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene34314 | -0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene36290 | 0.805423 | 1.34E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene36374 | 0.8146 | 1.42E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene44007 | 0.830625 | 2.64E-55 | -1.69E-46 |
| MS.gene056400 | MS.gene44390 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene056400 | MS.gene45533 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene46881 | -0.808069 | 3.71E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene48054 | 0.806076 | 9.80E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene49486 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene57162 | -0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene056400 | MS.gene62623 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene63887 | 0.844229 | 8.60E-59 | -1.69E-46 |
| MS.gene056400 | MS.gene68637 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene056400 | MS.gene68638 | 0.826952 | 2.04E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene68873 | 0.827397 | 1.60E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene68877 | 0.824944 | 6.13E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene68933 | 0.833034 | 6.72E-56 | -1.69E-46 |
| MS.gene056400 | MS.gene68959 | 0.82405 | 9.96E-54 | -1.69E-46 |
| MS.gene056400 | MS.gene70819 | 0.834836 | 2.38E-56 | -1.69E-46 |
| MS.gene056400 | MS.gene73273 | 0.804924 | 1.71E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene78247 | 0.823139 | 1.63E-53 | -1.69E-46 |
| MS.gene056400 | MS.gene79290 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene80298 | 0.804164 | 2.46E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene81381 | 0.844261 | 8.44E-59 | -1.69E-46 |
| MS.gene056400 | MS.gene83187 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene84382 | 0.840607 | 7.85E-58 | -1.69E-46 |
| MS.gene056400 | MS.gene84396 | 0.817778 | 2.76E-52 | -1.69E-46 |
| MS.gene056400 | MS.gene85168 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene87037 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene92548 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene056400 | MS.gene97411 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene99462 | 0.815694 | 8.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056400.t1 | MTR_4g068010 | 97.579 | 413 | 9 | 1 | 1 | 412 | 1 | 413 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056400.t1 | AT2G46200 | 51.699 | 412 | 163 | 6 | 1 | 412 | 1 | 376 | 9.86e-137 | 397 |
| MS.gene056400.t1 | AT2G46200 | 51.699 | 412 | 163 | 6 | 1 | 412 | 1 | 376 | 9.86e-137 | 397 |
| MS.gene056400.t1 | AT2G46200 | 49.612 | 387 | 159 | 6 | 1 | 387 | 1 | 351 | 2.51e-118 | 348 |
| MS.gene056400.t1 | AT2G46200 | 48.942 | 378 | 151 | 6 | 1 | 375 | 1 | 339 | 8.99e-111 | 329 |
Find 115 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTTCTGCATGGCTTTCC+TGG | 0.172055 | 4.1:+33871367 | None:intergenic |
| CTTCAACAGCCATTGCTTCT+TGG | 0.185190 | 4.1:+33873347 | None:intergenic |
| CACCAAAGTCAAGTTCCTTT+TGG | 0.217981 | 4.1:-33873766 | MS.gene056400:CDS |
| CTCCTCCAGCCAACGAGATA+TGG | 0.241122 | 4.1:-33870658 | MS.gene056400:CDS |
| ATAGAACTCAATCGGTAAAT+TGG | 0.263314 | 4.1:+33871181 | None:intergenic |
| TTCAACAGCCATTGCTTCTT+GGG | 0.270473 | 4.1:+33873348 | None:intergenic |
| CATCTTCCTCTGGGAGAAAA+TGG | 0.275665 | 4.1:+33871498 | None:intergenic |
| GGACCGATCACAGACATTTC+TGG | 0.278515 | 4.1:+33873739 | None:intergenic |
| GAACTTGACTTTGGTGGTTC+GGG | 0.337746 | 4.1:+33873773 | None:intergenic |
| CCTTCCTCCCGGTCGAATAT+AGG | 0.351124 | 4.1:+33870837 | None:intergenic |
| CAATGATGAAAGTCAGATTA+AGG | 0.364871 | 4.1:-33871324 | MS.gene056400:CDS |
| GGAACTTGACTTTGGTGGTT+CGG | 0.367502 | 4.1:+33873772 | None:intergenic |
| GGTGGTTCGGGTGGTAATAT+TGG | 0.395600 | 4.1:+33873785 | None:intergenic |
| TGGAGGAGCTTATGATCCTT+TGG | 0.396538 | 4.1:-33871204 | MS.gene056400:CDS |
| ATCCCTCTTCGGTTACACTA+TGG | 0.402654 | 4.1:+33871282 | None:intergenic |
| ACAGCTCGAGTTGCTCTTGA+TGG | 0.410405 | 4.1:-33872020 | MS.gene056400:intron |
| CGAGATATGGGCATCTTACT+TGG | 0.410996 | 4.1:-33870645 | MS.gene056400:CDS |
| GTTAAAACTAAAAGCTCAGC+TGG | 0.412096 | 4.1:-33873308 | MS.gene056400:CDS |
| GCATCTGAAGGACAGAACTA+TGG | 0.412575 | 4.1:-33871224 | MS.gene056400:CDS |
| CTTGATACTTGCAATTTCCT+TGG | 0.418968 | 4.1:+33872983 | None:intergenic |
| CAAAAGGAACTTGACTTTGG+TGG | 0.419927 | 4.1:+33873767 | None:intergenic |
| AGGCTGATGAATGGAGGGCT+AGG | 0.421411 | 4.1:-33873013 | MS.gene056400:CDS |
| ATCTCGTTGGCTGGAGGAGG+AGG | 0.421763 | 4.1:+33870662 | None:intergenic |
| AGAAGAGGAGCGTGAAGCTT+TGG | 0.426297 | 4.1:-33871441 | MS.gene056400:CDS |
| GAAGAAGAAATTAGAGTCTG+AGG | 0.447206 | 4.1:-33872365 | MS.gene056400:intron |
| TAGAGTATCTTGCAATTCCC+TGG | 0.448248 | 4.1:+33873718 | None:intergenic |
| GAAATGTCTGTGATCGGTCC+AGG | 0.451951 | 4.1:-33873736 | MS.gene056400:CDS |
| TTGCAACTGCCGAGGAATCC+AGG | 0.452947 | 4.1:-33871385 | MS.gene056400:CDS |
| ACTGCTGATTTCTCTTCCCA+TGG | 0.453492 | 4.1:+33873253 | None:intergenic |
| GAGCCATGAGTTTCTTCTAA+AGG | 0.453971 | 4.1:+33873430 | None:intergenic |
| ACATTATCAAAGAGAGTAAA+GGG | 0.455763 | 4.1:-33873453 | MS.gene056400:CDS |
| ATAAAGTGCATAAGTCTAAA+CGG | 0.456650 | 4.1:-33873216 | MS.gene056400:CDS |
| GAGTTCTATCATTATTATCA+TGG | 0.459001 | 4.1:-33871167 | MS.gene056400:CDS |
| ATGTACTTTATGTAGGCAAA+AGG | 0.462922 | 4.1:-33873491 | MS.gene056400:intron |
| TCCTCCAGCCAACGAGATAT+GGG | 0.464743 | 4.1:-33870657 | MS.gene056400:CDS |
| TCCCAAAAGGAACTTGACTT+TGG | 0.471225 | 4.1:+33873764 | None:intergenic |
| CCCTCCATTCATCAGCCTCT+CGG | 0.473533 | 4.1:+33873018 | None:intergenic |
| GTCAGATTAAGGAGAACAAC+GGG | 0.475520 | 4.1:-33871313 | MS.gene056400:CDS |
| TTAAAGAATTACGCTCCATA+AGG | 0.476317 | 4.1:-33871988 | MS.gene056400:CDS |
| GAAGCGTATTGCGGAAATGC+TGG | 0.479183 | 4.1:-33873167 | MS.gene056400:CDS |
| AGTTGCATCTAATCCCTCTT+CGG | 0.483018 | 4.1:+33871271 | None:intergenic |
| TCAAGAAAAGGTTGTGGTGG+TGG | 0.483619 | 4.1:+33873821 | None:intergenic |
| AAAATTTATCATCTTCCTCT+GGG | 0.483774 | 4.1:+33871489 | None:intergenic |
| GGTGCAGACTGAAAAGGAAC+TGG | 0.489260 | 4.1:+33873848 | None:intergenic |
| CATGGCTTTCCTGGATTCCT+CGG | 0.489725 | 4.1:+33871376 | None:intergenic |
| AACATTATCAAAGAGAGTAA+AGG | 0.492692 | 4.1:-33873454 | MS.gene056400:CDS |
| GACATTTCTGGTCTCCCAAA+AGG | 0.495679 | 4.1:+33873751 | None:intergenic |
| CAAGGAAATTGCAAGTATCA+AGG | 0.496356 | 4.1:-33872982 | MS.gene056400:intron |
| AAGTTTCCCTTGGTTCTGCA+TGG | 0.496492 | 4.1:+33871358 | None:intergenic |
| GGTAATATTGGAAGCTGCAT+AGG | 0.497498 | 4.1:+33873797 | None:intergenic |
| GATGCCCATATCTCGTTGGC+TGG | 0.497660 | 4.1:+33870653 | None:intergenic |
| CATATCTCGTTGGCTGGAGG+AGG | 0.504973 | 4.1:+33870659 | None:intergenic |
| TAATAATGATAGAACTCAAT+CGG | 0.507283 | 4.1:+33871173 | None:intergenic |
| AAGAGAAATCAGCAGTGGCC+AGG | 0.512018 | 4.1:-33873246 | MS.gene056400:CDS |
| AGCTGCATAGGTTCAAGAAA+AGG | 0.516752 | 4.1:+33873809 | None:intergenic |
| TTGACCGAGAGGCTGATGAA+TGG | 0.517727 | 4.1:-33873022 | MS.gene056400:CDS |
| ATGCACTTTATTTGTAAACC+TGG | 0.520502 | 4.1:+33873228 | None:intergenic |
| GATACTCTAAATCTTGCAAA+GGG | 0.523005 | 4.1:-33873704 | MS.gene056400:CDS |
| GGAGGCTGAACCCAGTGTCC+TGG | 0.524624 | 4.1:+33870680 | None:intergenic |
| TTGCGGATGAAGCAAGTCCA+TGG | 0.526086 | 4.1:-33873270 | MS.gene056400:CDS |
| TTTATTTAATACCTTCCTCC+CGG | 0.530215 | 4.1:+33870826 | None:intergenic |
| TCAGGCTGCAGTGGAAGAAG+AGG | 0.531380 | 4.1:-33871456 | MS.gene056400:CDS |
| TGAGAGAGTTCAGGCTGCAG+TGG | 0.533147 | 4.1:-33871465 | MS.gene056400:CDS |
| AAAGGTTGTGGTGGTGGCGG+AGG | 0.533422 | 4.1:+33873827 | None:intergenic |
| ATGGGATGCCTATATTCGAC+CGG | 0.536152 | 4.1:-33870845 | MS.gene056400:CDS |
| AGAAAAGGTTGTGGTGGTGG+CGG | 0.538353 | 4.1:+33873824 | None:intergenic |
| CCTATATTCGACCGGGAGGA+AGG | 0.539475 | 4.1:-33870837 | MS.gene056400:intron |
| CTTGACTTTGGTGGTTCGGG+TGG | 0.542283 | 4.1:+33873776 | None:intergenic |
| TGAAGTGTCTAGAGGACAGA+GGG | 0.549595 | 4.1:-33873384 | MS.gene056400:CDS |
| ACTTTGTGCAGTCGCATACC+AGG | 0.551095 | 4.1:-33870698 | MS.gene056400:intron |
| AGTCTAAACGGAATAAACTC+TGG | 0.556446 | 4.1:-33873204 | MS.gene056400:CDS |
| TCATGCAGGTTAGAAGAGGA+TGG | 0.557785 | 4.1:-33870864 | MS.gene056400:intron |
| GGCGGAGGTGCAGACTGAAA+AGG | 0.560104 | 4.1:+33873842 | None:intergenic |
| GGCTGATGAATGGAGGGCTA+GGG | 0.568574 | 4.1:-33873012 | MS.gene056400:CDS |
| TCATCCGCAACATATCTGAA+TGG | 0.572382 | 4.1:+33873283 | None:intergenic |
| ACCGAGAGGCTGATGAATGG+AGG | 0.572524 | 4.1:-33873019 | MS.gene056400:CDS |
| CAGTCGCATACCAGGACACT+GGG | 0.574072 | 4.1:-33870690 | MS.gene056400:CDS |
| TCATGGAAGCAACAATGACA+TGG | 0.575257 | 4.1:-33871150 | MS.gene056400:CDS |
| TATAGAAACCCAAGAAGCAA+TGG | 0.579164 | 4.1:-33873356 | MS.gene056400:CDS |
| AGATACTCTAAATCTTGCAA+AGG | 0.591220 | 4.1:-33873705 | MS.gene056400:CDS |
| AGGAAAGCCATGCAGAACCA+AGG | 0.592619 | 4.1:-33871365 | MS.gene056400:CDS |
| GTCCATAGTGTAACCGAAGA+GGG | 0.596745 | 4.1:-33871284 | MS.gene056400:CDS |
| GCTCGAGTTGCTCTTGATGG+AGG | 0.597688 | 4.1:-33872017 | MS.gene056400:CDS |
| CCGAGAGGCTGATGAATGGA+GGG | 0.598428 | 4.1:-33873018 | MS.gene056400:CDS |
| CATGCAGGTTAGAAGAGGAT+GGG | 0.601067 | 4.1:-33870863 | MS.gene056400:intron |
| AGACCAGAAATGTCTGTGAT+CGG | 0.603717 | 4.1:-33873742 | MS.gene056400:CDS |
| GGAAAGCCATGCAGAACCAA+GGG | 0.605910 | 4.1:-33871364 | MS.gene056400:CDS |
| ATGAAGTGTCTAGAGGACAG+AGG | 0.609005 | 4.1:-33873385 | MS.gene056400:CDS |
| TCTAGTAACATAGCATCTGA+AGG | 0.611727 | 4.1:-33871236 | MS.gene056400:CDS |
| GCCCATATCTCGTTGGCTGG+AGG | 0.613148 | 4.1:+33870656 | None:intergenic |
| TGCGGATGAAGCAAGTCCAT+GGG | 0.617590 | 4.1:-33873269 | MS.gene056400:CDS |
| AATCTCATGCAGGTTAGAAG+AGG | 0.619327 | 4.1:-33870868 | MS.gene056400:intron |
| AGATGCAATTGCAACTGCCG+AGG | 0.619618 | 4.1:-33871393 | MS.gene056400:CDS |
| GCAGTCGCATACCAGGACAC+TGG | 0.624972 | 4.1:-33870691 | MS.gene056400:intron |
| GTAAGATGCCCATATCTCGT+TGG | 0.625297 | 4.1:+33870649 | None:intergenic |
| AAATGTCTGTGATCGGTCCA+GGG | 0.626046 | 4.1:-33873735 | MS.gene056400:CDS |
| GGAGCCATTCAGATATGTTG+CGG | 0.629602 | 4.1:-33873287 | MS.gene056400:CDS |
| GGGCCTTTAGAAGAAACTCA+TGG | 0.633643 | 4.1:-33873433 | MS.gene056400:CDS |
| TATTGCGGAAATGCTGGCAA+AGG | 0.633876 | 4.1:-33873161 | MS.gene056400:intron |
| TATGGGCATCTTACTTGGTG+AGG | 0.633963 | 4.1:-33870640 | MS.gene056400:CDS |
| AGTCCATAGTGTAACCGAAG+AGG | 0.638150 | 4.1:-33871285 | MS.gene056400:CDS |
| CTAAACGGAATAAACTCTGG+AGG | 0.641658 | 4.1:-33873201 | MS.gene056400:CDS |
| GGTTCAAGAAAAGGTTGTGG+TGG | 0.642961 | 4.1:+33873818 | None:intergenic |
| TGGGATGCCTATATTCGACC+GGG | 0.643337 | 4.1:-33870844 | MS.gene056400:CDS |
| TCAATCGGTAAATTGGCCAA+AGG | 0.652661 | 4.1:+33871188 | None:intergenic |
| GAGGGCTAGGGAGATTGCCA+AGG | 0.655856 | 4.1:-33873000 | MS.gene056400:CDS |
| TCTGAAGGACAGAACTATGG+AGG | 0.667704 | 4.1:-33871221 | MS.gene056400:CDS |
| AGTCAGATTAAGGAGAACAA+CGG | 0.668743 | 4.1:-33871314 | MS.gene056400:CDS |
| CATGGAAGCAACAATGACAT+GGG | 0.669121 | 4.1:-33871149 | MS.gene056400:CDS |
| TGACATGGGCACATTGATCG+AGG | 0.675577 | 4.1:-33871135 | MS.gene056400:intron |
| ATAGGTTCAAGAAAAGGTTG+TGG | 0.678067 | 4.1:+33873815 | None:intergenic |
| ATTTGATCAAATTGACCGAG+AGG | 0.685541 | 4.1:-33873033 | MS.gene056400:CDS |
| ATGGGAAGAGAAATCAGCAG+TGG | 0.688987 | 4.1:-33873251 | MS.gene056400:CDS |
| GATGCCTATATTCGACCGGG+AGG | 0.757591 | 4.1:-33870841 | MS.gene056400:CDS |
| GAAGTGTCTAGAGGACAGAG+GGG | 0.760985 | 4.1:-33873383 | MS.gene056400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATAAACAAAATAG+AGG | + | chr4.1:33872219-33872238 | None:intergenic | 10.0% |
| !! | AATAACAACAATAATAAAAG+TGG | + | chr4.1:33873536-33873555 | None:intergenic | 15.0% |
| !! | ACCATCAAATTAAAAATTTA+TGG | + | chr4.1:33872871-33872890 | None:intergenic | 15.0% |
| !!! | ACCATAAATTTTTAATTTGA+TGG | - | chr4.1:33872867-33872886 | MS.gene056400:intron | 15.0% |
| !!! | GATAATACTAAATTTTGTAA+AGG | + | chr4.1:33872839-33872858 | None:intergenic | 15.0% |
| !!! | GTTTGAAATAATTAAGAAAA+TGG | + | chr4.1:33871930-33871949 | None:intergenic | 15.0% |
| !!! | TCTTAATTATTTCAAACTTT+TGG | - | chr4.1:33871933-33871952 | MS.gene056400:intron | 15.0% |
| !! | ATACAAAAGTTGAAAAAACA+AGG | - | chr4.1:33872520-33872539 | MS.gene056400:intron | 20.0% |
| !! | ATATTATTCCTGATAAAAAG+TGG | - | chr4.1:33871829-33871848 | MS.gene056400:intron | 20.0% |
| !! | TAATAATGATAGAACTCAAT+CGG | + | chr4.1:33873315-33873334 | None:intergenic | 20.0% |
| !! | TTAAGGTAACAAACTATTAT+AGG | + | chr4.1:33872679-33872698 | None:intergenic | 20.0% |
| !!! | GGTAAATCATTTCTATTTTA+TGG | - | chr4.1:33872289-33872308 | MS.gene056400:intron | 20.0% |
| !!! | GTTGATTTGTTAAAAAATCT+AGG | - | chr4.1:33871419-33871438 | MS.gene056400:CDS | 20.0% |
| !!! | TCAATTTTTATTGTTTTGCT+TGG | - | chr4.1:33872609-33872628 | MS.gene056400:intron | 20.0% |
| !!! | TGAATTCTAAAGAAACAAAA+AGG | + | chr4.1:33873431-33873450 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTAGAATTCATAT+TGG | - | chr4.1:33873434-33873453 | MS.gene056400:CDS | 20.0% |
| ! | AAAAATTTATCATCTTCCTC+TGG | + | chr4.1:33873000-33873019 | None:intergenic | 25.0% |
| ! | AAAATTTATCATCTTCCTCT+GGG | + | chr4.1:33872999-33873018 | None:intergenic | 25.0% |
| ! | AACATTATCAAAGAGAGTAA+AGG | - | chr4.1:33871031-33871050 | MS.gene056400:intron | 25.0% |
| ! | AATGTATAGCTATATCCATA+TGG | + | chr4.1:33872361-33872380 | None:intergenic | 25.0% |
| ! | AATTTGTAGAGATGATTAGT+TGG | + | chr4.1:33871887-33871906 | None:intergenic | 25.0% |
| ! | ACATTATCAAAGAGAGTAAA+GGG | - | chr4.1:33871032-33871051 | MS.gene056400:intron | 25.0% |
| ! | ATAAAGTGCATAAGTCTAAA+CGG | - | chr4.1:33871269-33871288 | MS.gene056400:CDS | 25.0% |
| ! | ATAATCAAAATGCCAAACAT+TGG | + | chr4.1:33872774-33872793 | None:intergenic | 25.0% |
| ! | ATATCAGTCACTATAAATGT+AGG | + | chr4.1:33871551-33871570 | None:intergenic | 25.0% |
| ! | GAATTTGTAAACTTATTCGT+TGG | + | chr4.1:33871636-33871655 | None:intergenic | 25.0% |
| ! | GAGTTCTATCATTATTATCA+TGG | - | chr4.1:33873318-33873337 | MS.gene056400:CDS | 25.0% |
| ! | TAGTTTGATGTACTTTATGT+AGG | - | chr4.1:33870987-33871006 | MS.gene056400:intron | 25.0% |
| ! | TATGTAAGTTTCATATATGC+AGG | - | chr4.1:33872964-33872983 | MS.gene056400:intron | 25.0% |
| ! | TATTGAAAAAAAAGAGTCAG+AGG | - | chr4.1:33872246-33872265 | MS.gene056400:intron | 25.0% |
| ! | TGGCAAATGTTAATAATTAG+TGG | + | chr4.1:33871794-33871813 | None:intergenic | 25.0% |
| ! | TTAGTCAATTATGCTAAACT+TGG | - | chr4.1:33871717-33871736 | MS.gene056400:intron | 25.0% |
| !! | GTAAATTTTTGTACAAGTGA+TGG | - | chr4.1:33872268-33872287 | MS.gene056400:intron | 25.0% |
| !! | TGTATTGCAAACTGATTTAA+CGG | + | chr4.1:33872021-33872040 | None:intergenic | 25.0% |
| !! | TTTCAACTTTTGTATCCTTA+TGG | + | chr4.1:33872515-33872534 | None:intergenic | 25.0% |
| !!! | AATATGCGCATTTTTTTGAA+TGG | + | chr4.1:33871814-33871833 | None:intergenic | 25.0% |
| !!! | TAAATTTTTTGAGAGAGTTC+AGG | - | chr4.1:33873011-33873030 | MS.gene056400:CDS | 25.0% |
| !!! | TTCTTTAGAATTCATATTGG+TGG | - | chr4.1:33873437-33873456 | MS.gene056400:CDS | 25.0% |
| !!! | TTGATAATTGTTTTTGCCAA+AGG | - | chr4.1:33871570-33871589 | MS.gene056400:intron | 25.0% |
| AAAAGATAAATGTGGCAACA+AGG | + | chr4.1:33872650-33872669 | None:intergenic | 30.0% | |
| AAAATGAAACTTCTTACGCT+AGG | - | chr4.1:33873683-33873702 | MS.gene056400:intron | 30.0% | |
| AAAGATAAATGTGGCAACAA+GGG | + | chr4.1:33872649-33872668 | None:intergenic | 30.0% | |
| AACACAATGAGTGTTTATAC+TGG | + | chr4.1:33870943-33870962 | None:intergenic | 30.0% | |
| AATTATGCTAAACTTGGAGT+TGG | - | chr4.1:33871723-33871742 | MS.gene056400:intron | 30.0% | |
| AGACAATAGCTACAATAAAG+AGG | + | chr4.1:33871378-33871397 | None:intergenic | 30.0% | |
| AGATACTCTAAATCTTGCAA+AGG | - | chr4.1:33870780-33870799 | MS.gene056400:intron | 30.0% | |
| ATAGAACTCAATCGGTAAAT+TGG | + | chr4.1:33873307-33873326 | None:intergenic | 30.0% | |
| ATGTACTTTATGTAGGCAAA+AGG | - | chr4.1:33870994-33871013 | MS.gene056400:intron | 30.0% | |
| ATTCTGTTCTATCTACCATA+TGG | - | chr4.1:33872343-33872362 | MS.gene056400:intron | 30.0% | |
| CAATGATGAAAGTCAGATTA+AGG | - | chr4.1:33873161-33873180 | MS.gene056400:intron | 30.0% | |
| CATAAATCTGCATTCAGAAT+CGG | + | chr4.1:33872712-33872731 | None:intergenic | 30.0% | |
| GAATCGGAACTATGAATTTA+AGG | + | chr4.1:33872696-33872715 | None:intergenic | 30.0% | |
| GATACTCTAAATCTTGCAAA+GGG | - | chr4.1:33870781-33870800 | MS.gene056400:intron | 30.0% | |
| GCATAATTGACTAATCAATC+AGG | + | chr4.1:33871711-33871730 | None:intergenic | 30.0% | |
| GTATAAACACTCATTGTGTT+TGG | - | chr4.1:33870943-33870962 | MS.gene056400:intron | 30.0% | |
| TTAAAGAATTACGCTCCATA+AGG | - | chr4.1:33872497-33872516 | MS.gene056400:intron | 30.0% | |
| TTTATTTAATACCTTCCTCC+CGG | + | chr4.1:33873662-33873681 | None:intergenic | 30.0% | |
| ! | ATGCACTTTATTTGTAAACC+TGG | + | chr4.1:33871260-33871279 | None:intergenic | 30.0% |
| ! | GGAAGTACAAAAGATAAATG+TGG | + | chr4.1:33872658-33872677 | None:intergenic | 30.0% |
| ! | TTTTCAGCTTAAATCTCTCT+CGG | - | chr4.1:33870878-33870897 | MS.gene056400:intron | 30.0% |
| !! | AAGTTTTATGAAGTGTCTAG+AGG | - | chr4.1:33871093-33871112 | MS.gene056400:intron | 30.0% |
| !! | TTTCTTTTGAAAGTTTCCCT+TGG | + | chr4.1:33873140-33873159 | None:intergenic | 30.0% |
| !!! | ATTTCCTTTTGTTTTGCCTT+TGG | - | chr4.1:33872150-33872169 | MS.gene056400:intron | 30.0% |
| !!! | CTCTGACATTTTTCAAGATT+TGG | - | chr4.1:33871673-33871692 | MS.gene056400:intron | 30.0% |
| !!! | TTTCCTTTTGTTTTGCCTTT+GGG | - | chr4.1:33872151-33872170 | MS.gene056400:intron | 30.0% |
| AAAAAGTGGAGCTAGTTGAA+AGG | - | chr4.1:33871843-33871862 | MS.gene056400:intron | 35.0% | |
| AGTCAGATTAAGGAGAACAA+CGG | - | chr4.1:33873171-33873190 | MS.gene056400:CDS | 35.0% | |
| AGTCTAAACGGAATAAACTC+TGG | - | chr4.1:33871281-33871300 | MS.gene056400:CDS | 35.0% | |
| ATAACCTTTCAGATAGCCTT+TGG | + | chr4.1:33871589-33871608 | None:intergenic | 35.0% | |
| ATAGGTTCAAGAAAAGGTTG+TGG | + | chr4.1:33870673-33870692 | None:intergenic | 35.0% | |
| ATCAAGTTCTTCAGAGTTCA+CGG | + | chr4.1:33872318-33872337 | None:intergenic | 35.0% | |
| ATTTGATCAAATTGACCGAG+AGG | - | chr4.1:33871452-33871471 | MS.gene056400:CDS | 35.0% | |
| CAAGGAAATTGCAAGTATCA+AGG | - | chr4.1:33871503-33871522 | MS.gene056400:intron | 35.0% | |
| CGATTCTGAATGCAGATTTA+TGG | - | chr4.1:33872710-33872729 | MS.gene056400:intron | 35.0% | |
| CTAACCTGCATGAGATTATT+CGG | + | chr4.1:33873614-33873633 | None:intergenic | 35.0% | |
| CTTGATACTTGCAATTTCCT+TGG | + | chr4.1:33871505-33871524 | None:intergenic | 35.0% | |
| GAAGAAGAAATTAGAGTCTG+AGG | - | chr4.1:33872120-33872139 | MS.gene056400:intron | 35.0% | |
| GATTATTCGGCAGTCAATAA+TGG | + | chr4.1:33873601-33873620 | None:intergenic | 35.0% | |
| GTTAAAACTAAAAGCTCAGC+TGG | - | chr4.1:33871177-33871196 | MS.gene056400:CDS | 35.0% | |
| TATAGAAACCCAAGAAGCAA+TGG | - | chr4.1:33871129-33871148 | MS.gene056400:intron | 35.0% | |
| TCTAGTAACATAGCATCTGA+AGG | - | chr4.1:33873249-33873268 | MS.gene056400:CDS | 35.0% | |
| TCTTTACTGTTCACTTGTTC+AGG | - | chr4.1:33871965-33871984 | MS.gene056400:intron | 35.0% | |
| ! | AACTCTGGAGGAAGAAAAAA+AGG | - | chr4.1:33871296-33871315 | MS.gene056400:CDS | 35.0% |
| ! | ACCAAAGTCAAGTTCCTTTT+GGG | - | chr4.1:33870720-33870739 | MS.gene056400:intron | 35.0% |
| ! | GAAAAAAAGGAAGCGTATTG+CGG | - | chr4.1:33871309-33871328 | MS.gene056400:CDS | 35.0% |
| ! | TCTGAAACATGTCTATATGC+AGG | - | chr4.1:33872054-33872073 | MS.gene056400:intron | 35.0% |
| ! | TGAGTTCAAGTTCCAATGTT+TGG | - | chr4.1:33872759-33872778 | MS.gene056400:intron | 35.0% |
| !!! | AACTAGCTCCACTTTTTATC+AGG | + | chr4.1:33871840-33871859 | None:intergenic | 35.0% |
| !!! | TAGTTTTTTCTCCTTCGTCT+GGG | + | chr4.1:33871765-33871784 | None:intergenic | 35.0% |
| !!! | TTAGTTTTTTCTCCTTCGTC+TGG | + | chr4.1:33871766-33871785 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGTTTTGCCTTTG+GGG | - | chr4.1:33872152-33872171 | MS.gene056400:intron | 35.0% |
| AACCCCAAAGGCAAAACAAA+AGG | + | chr4.1:33872157-33872176 | None:intergenic | 40.0% | |
| AATCTCATGCAGGTTAGAAG+AGG | - | chr4.1:33873617-33873636 | MS.gene056400:intron | 40.0% | |
| AGACCAGAAATGTCTGTGAT+CGG | - | chr4.1:33870743-33870762 | MS.gene056400:intron | 40.0% | |
| AGCTGCATAGGTTCAAGAAA+AGG | + | chr4.1:33870679-33870698 | None:intergenic | 40.0% | |
| AGTTGCATCTAATCCCTCTT+CGG | + | chr4.1:33873217-33873236 | None:intergenic | 40.0% | |
| CAAAAGGAACTTGACTTTGG+TGG | + | chr4.1:33870721-33870740 | None:intergenic | 40.0% | |
| CATGGAAGCAACAATGACAT+GGG | - | chr4.1:33873336-33873355 | MS.gene056400:CDS | 40.0% | |
| CTAAACGGAATAAACTCTGG+AGG | - | chr4.1:33871284-33871303 | MS.gene056400:CDS | 40.0% | |
| GAGCCATGAGTTTCTTCTAA+AGG | + | chr4.1:33871058-33871077 | None:intergenic | 40.0% | |
| GCACAAAGTTACAAGGAACA+GGG | + | chr4.1:33873776-33873795 | None:intergenic | 40.0% | |
| GGTAATATTGGAAGCTGCAT+AGG | + | chr4.1:33870691-33870710 | None:intergenic | 40.0% | |
| GTCAGATTAAGGAGAACAAC+GGG | - | chr4.1:33873172-33873191 | MS.gene056400:CDS | 40.0% | |
| TATGCTAAACTTGGAGTTGG+AGG | - | chr4.1:33871726-33871745 | MS.gene056400:intron | 40.0% | |
| TCAATCGGTAAATTGGCCAA+AGG | + | chr4.1:33873300-33873319 | None:intergenic | 40.0% | |
| TCATCCGCAACATATCTGAA+TGG | + | chr4.1:33871205-33871224 | None:intergenic | 40.0% | |
| TCATGGAAGCAACAATGACA+TGG | - | chr4.1:33873335-33873354 | MS.gene056400:CDS | 40.0% | |
| TCCCAAAAGGAACTTGACTT+TGG | + | chr4.1:33870724-33870743 | None:intergenic | 40.0% | |
| TGCACAAAGTTACAAGGAAC+AGG | + | chr4.1:33873777-33873796 | None:intergenic | 40.0% | |
| TTCAACAGCCATTGCTTCTT+GGG | + | chr4.1:33871140-33871159 | None:intergenic | 40.0% | |
| TTTGCCAAAGGCTATCTGAA+AGG | - | chr4.1:33871582-33871601 | MS.gene056400:intron | 40.0% | |
| ! | CACCAAAGTCAAGTTCCTTT+TGG | - | chr4.1:33870719-33870738 | MS.gene056400:intron | 40.0% |
| ! | GCTGAAAAGCAACTTTTACG+TGG | + | chr4.1:33870866-33870885 | None:intergenic | 40.0% |
| ! | GGCAAAGGTTACTTTGCTTT+GGG | - | chr4.1:33871339-33871358 | MS.gene056400:CDS | 40.0% |
| ! | TAGAGTATCTTGCAATTCCC+TGG | + | chr4.1:33870770-33870789 | None:intergenic | 40.0% |
| ! | TGGCAAAGGTTACTTTGCTT+TGG | - | chr4.1:33871338-33871357 | MS.gene056400:CDS | 40.0% |
| AAATGTCTGTGATCGGTCCA+GGG | - | chr4.1:33870750-33870769 | MS.gene056400:intron | 45.0% | |
| ACTGCCGAATAATCTCATGC+AGG | - | chr4.1:33873607-33873626 | MS.gene056400:intron | 45.0% | |
| AGTCCATAGTGTAACCGAAG+AGG | - | chr4.1:33873200-33873219 | MS.gene056400:CDS | 45.0% | |
| ATCCCTCTTCGGTTACACTA+TGG | + | chr4.1:33873206-33873225 | None:intergenic | 45.0% | |
| ATGGGAAGAGAAATCAGCAG+TGG | - | chr4.1:33871234-33871253 | MS.gene056400:CDS | 45.0% | |
| ATGGGATGCCTATATTCGAC+CGG | - | chr4.1:33873640-33873659 | MS.gene056400:intron | 45.0% | |
| CATGCAGGTTAGAAGAGGAT+GGG | - | chr4.1:33873622-33873641 | MS.gene056400:intron | 45.0% | |
| CGAGATATGGGCATCTTACT+TGG | - | chr4.1:33873840-33873859 | MS.gene056400:CDS | 45.0% | |
| CTTCAACAGCCATTGCTTCT+TGG | + | chr4.1:33871141-33871160 | None:intergenic | 45.0% | |
| GCATCTGAAGGACAGAACTA+TGG | - | chr4.1:33873261-33873280 | MS.gene056400:CDS | 45.0% | |
| GGAGCCATTCAGATATGTTG+CGG | - | chr4.1:33871198-33871217 | MS.gene056400:CDS | 45.0% | |
| GGTTCAAGAAAAGGTTGTGG+TGG | + | chr4.1:33870670-33870689 | None:intergenic | 45.0% | |
| GTAAGATGCCCATATCTCGT+TGG | + | chr4.1:33873839-33873858 | None:intergenic | 45.0% | |
| GTCCATAGTGTAACCGAAGA+GGG | - | chr4.1:33873201-33873220 | MS.gene056400:CDS | 45.0% | |
| TATTGCGGAAATGCTGGCAA+AGG | - | chr4.1:33871324-33871343 | MS.gene056400:CDS | 45.0% | |
| TCAAGAAAAGGTTGTGGTGG+TGG | + | chr4.1:33870667-33870686 | None:intergenic | 45.0% | |
| TCATGCAGGTTAGAAGAGGA+TGG | - | chr4.1:33873621-33873640 | MS.gene056400:intron | 45.0% | |
| TCTGAAGGACAGAACTATGG+AGG | - | chr4.1:33873264-33873283 | MS.gene056400:CDS | 45.0% | |
| TGCGACTGCACAAAGTTACA+AGG | + | chr4.1:33873783-33873802 | None:intergenic | 45.0% | |
| TGGAGGAGCTTATGATCCTT+TGG | - | chr4.1:33873281-33873300 | MS.gene056400:CDS | 45.0% | |
| ! | ATGAAGTGTCTAGAGGACAG+AGG | - | chr4.1:33871100-33871119 | MS.gene056400:intron | 45.0% |
| ! | CATCTTCCTCTGGGAGAAAA+TGG | + | chr4.1:33872990-33873009 | None:intergenic | 45.0% |
| ! | GAACTTGACTTTGGTGGTTC+GGG | + | chr4.1:33870715-33870734 | None:intergenic | 45.0% |
| ! | GGAACTTGACTTTGGTGGTT+CGG | + | chr4.1:33870716-33870735 | None:intergenic | 45.0% |
| ! | GGGCCTTTAGAAGAAACTCA+TGG | - | chr4.1:33871052-33871071 | MS.gene056400:intron | 45.0% |
| ! | TATGGGCATCTTACTTGGTG+AGG | - | chr4.1:33873845-33873864 | MS.gene056400:CDS | 45.0% |
| ! | TGAAGTGTCTAGAGGACAGA+GGG | - | chr4.1:33871101-33871120 | MS.gene056400:intron | 45.0% |
| !! | AAGTTTCCCTTGGTTCTGCA+TGG | + | chr4.1:33873130-33873149 | None:intergenic | 45.0% |
| !! | ACTGCTGATTTCTCTTCCCA+TGG | + | chr4.1:33871235-33871254 | None:intergenic | 45.0% |
| !! | CGGCAGTCAATAATGGACTT+AGG | + | chr4.1:33873594-33873613 | None:intergenic | 45.0% |
| !! | GACATTTCTGGTCTCCCAAA+AGG | + | chr4.1:33870737-33870756 | None:intergenic | 45.0% |
| AAACTTGGAGTTGGAGGTCC+TGG | - | chr4.1:33871732-33871751 | MS.gene056400:intron | 50.0% | |
| AACTTGGAGTTGGAGGTCCT+GGG | - | chr4.1:33871733-33871752 | MS.gene056400:intron | 50.0% | |
| AAGAGAAATCAGCAGTGGCC+AGG | - | chr4.1:33871239-33871258 | MS.gene056400:CDS | 50.0% | |
| ACTTTGTGCAGTCGCATACC+AGG | - | chr4.1:33873787-33873806 | MS.gene056400:CDS | 50.0% | |
| AGATGCAATTGCAACTGCCG+AGG | - | chr4.1:33873092-33873111 | MS.gene056400:intron | 50.0% | |
| AGGAAAGCCATGCAGAACCA+AGG | - | chr4.1:33873120-33873139 | MS.gene056400:intron | 50.0% | |
| CATGGCTTTCCTGGATTCCT+CGG | + | chr4.1:33873112-33873131 | None:intergenic | 50.0% | |
| GAAATGTCTGTGATCGGTCC+AGG | - | chr4.1:33870749-33870768 | MS.gene056400:intron | 50.0% | |
| GAAGCGTATTGCGGAAATGC+TGG | - | chr4.1:33871318-33871337 | MS.gene056400:CDS | 50.0% | |
| GGAAAGCCATGCAGAACCAA+GGG | - | chr4.1:33873121-33873140 | MS.gene056400:intron | 50.0% | |
| GGACCGATCACAGACATTTC+TGG | + | chr4.1:33870749-33870768 | None:intergenic | 50.0% | |
| GGTGCAGACTGAAAAGGAAC+TGG | + | chr4.1:33870640-33870659 | None:intergenic | 50.0% | |
| TCCTCCAGCCAACGAGATAT+GGG | - | chr4.1:33873828-33873847 | MS.gene056400:CDS | 50.0% | |
| TGACATGGGCACATTGATCG+AGG | - | chr4.1:33873350-33873369 | MS.gene056400:CDS | 50.0% | |
| TGCGGATGAAGCAAGTCCAT+GGG | - | chr4.1:33871216-33871235 | MS.gene056400:CDS | 50.0% | |
| TGGCACGTAACTGTGCATGA+AGG | - | chr4.1:33873457-33873476 | MS.gene056400:CDS | 50.0% | |
| TGGGATGCCTATATTCGACC+GGG | - | chr4.1:33873641-33873660 | MS.gene056400:intron | 50.0% | |
| TTGACCGAGAGGCTGATGAA+TGG | - | chr4.1:33871463-33871482 | MS.gene056400:CDS | 50.0% | |
| TTGCGGATGAAGCAAGTCCA+TGG | - | chr4.1:33871215-33871234 | MS.gene056400:CDS | 50.0% | |
| ! | ACAGCTCGAGTTGCTCTTGA+TGG | - | chr4.1:33872465-33872484 | MS.gene056400:intron | 50.0% |
| ! | AGAAGAGGAGCGTGAAGCTT+TGG | - | chr4.1:33873044-33873063 | MS.gene056400:CDS | 50.0% |
| ! | GAAGTGTCTAGAGGACAGAG+GGG | - | chr4.1:33871102-33871121 | MS.gene056400:intron | 50.0% |
| ! | GGTGGTTCGGGTGGTAATAT+TGG | + | chr4.1:33870703-33870722 | None:intergenic | 50.0% |
| !! | AGAAAAGGTTGTGGTGGTGG+CGG | + | chr4.1:33870664-33870683 | None:intergenic | 50.0% |
| !! | TTGGTTCTGCATGGCTTTCC+TGG | + | chr4.1:33873121-33873140 | None:intergenic | 50.0% |
| !!! | GTTTTGCCTTTGGGGTTGCA+GGG | - | chr4.1:33872160-33872179 | MS.gene056400:intron | 50.0% |
| !!! | TGTTTTGCCTTTGGGGTTGC+AGG | - | chr4.1:33872159-33872178 | MS.gene056400:intron | 50.0% |
| ACCGAGAGGCTGATGAATGG+AGG | - | chr4.1:33871466-33871485 | MS.gene056400:CDS | 55.0% | |
| AGGCTGATGAATGGAGGGCT+AGG | - | chr4.1:33871472-33871491 | MS.gene056400:CDS | 55.0% | |
| CAGTCGCATACCAGGACACT+GGG | - | chr4.1:33873795-33873814 | MS.gene056400:CDS | 55.0% | |
| CCCTCCATTCATCAGCCTCT+CGG | + | chr4.1:33871470-33871489 | None:intergenic | 55.0% | |
| CCGAGAGGCTGATGAATGGA+GGG | - | chr4.1:33871467-33871486 | MS.gene056400:CDS | 55.0% | |
| CCTATATTCGACCGGGAGGA+AGG | - | chr4.1:33873648-33873667 | MS.gene056400:intron | 55.0% | |
| CCTTCCTCCCGGTCGAATAT+AGG | + | chr4.1:33873651-33873670 | None:intergenic | 55.0% | |
| CTCCTCCAGCCAACGAGATA+TGG | - | chr4.1:33873827-33873846 | MS.gene056400:CDS | 55.0% | |
| GATGCCCATATCTCGTTGGC+TGG | + | chr4.1:33873835-33873854 | None:intergenic | 55.0% | |
| GATGCCTATATTCGACCGGG+AGG | - | chr4.1:33873644-33873663 | MS.gene056400:intron | 55.0% | |
| GGCTGATGAATGGAGGGCTA+GGG | - | chr4.1:33871473-33871492 | MS.gene056400:CDS | 55.0% | |
| TCAGGCTGCAGTGGAAGAAG+AGG | - | chr4.1:33873029-33873048 | MS.gene056400:CDS | 55.0% | |
| TGAGAGAGTTCAGGCTGCAG+TGG | - | chr4.1:33873020-33873039 | MS.gene056400:CDS | 55.0% | |
| TTGCAACTGCCGAGGAATCC+AGG | - | chr4.1:33873100-33873119 | MS.gene056400:intron | 55.0% | |
| ! | CATATCTCGTTGGCTGGAGG+AGG | + | chr4.1:33873829-33873848 | None:intergenic | 55.0% |
| ! | CTTGACTTTGGTGGTTCGGG+TGG | + | chr4.1:33870712-33870731 | None:intergenic | 55.0% |
| ! | GAAGTACCCTGCAACCCCAA+AGG | + | chr4.1:33872169-33872188 | None:intergenic | 55.0% |
| ! | GCTCGAGTTGCTCTTGATGG+AGG | - | chr4.1:33872468-33872487 | MS.gene056400:intron | 55.0% |
| ! | TTGGGGTTGCAGGGTACTTC+TGG | - | chr4.1:33872169-33872188 | MS.gene056400:intron | 55.0% |
| !! | TGCAGGCCATTTTCTCCCAG+AGG | - | chr4.1:33872981-33873000 | MS.gene056400:intron | 55.0% |
| CTGGGTTCGAACCCAGACGA+AGG | - | chr4.1:33871751-33871770 | MS.gene056400:intron | 60.0% | |
| CTTCGTCTGGGTTCGAACCC+AGG | + | chr4.1:33871753-33871772 | None:intergenic | 60.0% | |
| GAGGGCTAGGGAGATTGCCA+AGG | - | chr4.1:33871485-33871504 | MS.gene056400:CDS | 60.0% | |
| GCAGTCGCATACCAGGACAC+TGG | - | chr4.1:33873794-33873813 | MS.gene056400:CDS | 60.0% | |
| ! | ATCTCGTTGGCTGGAGGAGG+AGG | + | chr4.1:33873826-33873845 | None:intergenic | 60.0% |
| ! | GCCCATATCTCGTTGGCTGG+AGG | + | chr4.1:33873832-33873851 | None:intergenic | 60.0% |
| ! | GGCGGAGGTGCAGACTGAAA+AGG | + | chr4.1:33870646-33870665 | None:intergenic | 60.0% |
| !! | AAAGGTTGTGGTGGTGGCGG+AGG | + | chr4.1:33870661-33870680 | None:intergenic | 60.0% |
| GGAGGCTGAACCCAGTGTCC+TGG | + | chr4.1:33873808-33873827 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 33870631 | 33873876 | 33870631 | ID=MS.gene056400 |
| chr4.1 | mRNA | 33870631 | 33873876 | 33870631 | ID=MS.gene056400.t1;Parent=MS.gene056400 |
| chr4.1 | exon | 33873701 | 33873876 | 33873701 | ID=MS.gene056400.t1.exon1;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33873701 | 33873876 | 33873701 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33873162 | 33873498 | 33873162 | ID=MS.gene056400.t1.exon2;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33873162 | 33873498 | 33873162 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33872983 | 33873066 | 33872983 | ID=MS.gene056400.t1.exon3;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33872983 | 33873066 | 33872983 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33872366 | 33872431 | 33872366 | ID=MS.gene056400.t1.exon4;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33872366 | 33872431 | 33872366 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33871966 | 33872038 | 33871966 | ID=MS.gene056400.t1.exon5;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33871966 | 33872038 | 33871966 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33871136 | 33871521 | 33871136 | ID=MS.gene056400.t1.exon6;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33871136 | 33871521 | 33871136 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33870838 | 33870878 | 33870838 | ID=MS.gene056400.t1.exon7;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33870838 | 33870878 | 33870838 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| chr4.1 | exon | 33870631 | 33870709 | 33870631 | ID=MS.gene056400.t1.exon8;Parent=MS.gene056400.t1 |
| chr4.1 | CDS | 33870631 | 33870709 | 33870631 | ID=cds.MS.gene056400.t1;Parent=MS.gene056400.t1 |
| Gene Sequence |
| Protein sequence |
