AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69038.t1 MTR_6g087040 97.647 510 12 0 1 510 1 510 0.0 1018
MS.gene69038.t1 MTR_6g088375 97.647 510 12 0 1 510 1 510 0.0 1018
MS.gene69038.t1 MTR_8g102860 76.660 497 113 1 13 506 13 509 0.0 791
MS.gene69038.t1 MTR_8g102860 76.368 457 105 1 53 506 1 457 0.0 720
MS.gene69038.t1 MTR_0204s0020 58.215 493 202 3 8 499 3 492 0.0 613
MS.gene69038.t1 MTR_0204s0020 57.809 493 201 4 8 499 3 489 0.0 603
MS.gene69038.t1 MTR_7g091690 58.683 501 202 4 1 499 1 498 0.0 599
MS.gene69038.t1 MTR_5g094760 57.115 506 212 4 1 504 1 503 0.0 595
MS.gene69038.t1 MTR_0204s0040 55.624 489 215 2 14 502 17 503 0.0 588
MS.gene69038.t1 MTR_4g116770 55.624 489 215 2 14 502 213 699 0.0 587
MS.gene69038.t1 MTR_4g116790 55.200 500 220 3 3 502 6 501 0.0 576
MS.gene69038.t1 MTR_5g006070 57.317 492 203 6 18 504 14 503 0.0 564
MS.gene69038.t1 MTR_3g008160 53.347 493 227 3 18 508 15 506 0.0 530
MS.gene69038.t1 MTR_1g038630 52.756 508 232 5 1 505 1 503 0.0 523
MS.gene69038.t1 MTR_5g006070 56.674 457 191 6 53 504 1 455 0.0 518
MS.gene69038.t1 MTR_1g104780 53.360 506 227 6 1 502 1 501 1.82e-177 509
MS.gene69038.t1 MTR_1g104750 50.400 500 241 5 1 497 1 496 4.22e-177 507
MS.gene69038.t1 MTR_5g082540 52.361 487 227 4 18 501 15 499 3.36e-176 506
MS.gene69038.t1 MTR_0009s0370 52.439 492 228 4 18 504 13 503 7.54e-176 504
MS.gene69038.t1 MTR_1g104770 50.299 501 241 6 1 497 1 497 8.99e-175 501
MS.gene69038.t1 MTR_3g093010 52.437 513 231 7 1 505 1 508 4.02e-174 500
MS.gene69038.t1 MTR_5g041550 51.845 515 237 6 1 509 1 510 8.36e-174 499
MS.gene69038.t1 MTR_3g023480 51.710 497 230 5 15 504 10 503 1.69e-173 499
MS.gene69038.t1 MTR_4g091370 53.024 496 228 3 18 509 15 509 2.31e-171 493
MS.gene69038.t1 MTR_3g008160 53.057 458 212 3 53 508 1 457 1.25e-169 487
MS.gene69038.t1 MTR_3g008170 50.101 493 238 5 21 506 18 509 1.33e-169 489
MS.gene69038.t1 MTR_1g038600 49.901 507 230 6 1 505 1 485 2.29e-166 480
MS.gene69038.t1 MTR_3g007910 48.444 514 225 7 1 510 1 478 2.72e-160 464
MS.gene69038.t1 MTR_4g090600 52.941 493 227 4 18 506 15 506 6.42e-160 464
MS.gene69038.t1 MTR_3g074390 46.955 509 261 8 1 503 1 506 2.19e-159 463
MS.gene69038.t1 MTR_3g074410 45.365 507 269 8 1 503 1 503 1.21e-157 458
MS.gene69038.t1 MTR_3g074270 47.012 502 239 7 1 500 1 477 4.48e-156 453
MS.gene69038.t1 MTR_4g116790 55.220 364 159 3 3 366 6 365 9.68e-150 433
MS.gene69038.t1 MTR_3g093060 49.666 449 219 4 53 495 1 448 4.96e-146 427
MS.gene69038.t1 MTR_3g074380 46.612 369 192 5 1 367 1 366 2.64e-110 332
MS.gene69038.t1 MTR_3g074370 42.405 316 176 6 191 502 20 333 8.34e-88 273
MS.gene69038.t1 MTR_3g074340 42.089 316 177 6 191 502 20 333 1.31e-87 273
MS.gene69038.t1 MTR_3g074320 42.089 316 177 6 191 502 20 333 2.87e-87 272
MS.gene69038.t1 MTR_3g074400 36.044 455 232 11 53 483 1 420 1.33e-76 247
MS.gene69038.t1 MTR_6g088450 26.722 479 309 12 13 478 50 499 3.77e-53 187
MS.gene69038.t1 MTR_8g103500 26.295 502 336 11 21 510 13 492 7.03e-53 186
MS.gene69038.t1 MTR_4g072030 28.310 491 302 13 28 493 26 491 1.86e-50 181
MS.gene69038.t1 MTR_7g005910 30.000 480 305 12 25 497 32 487 5.41e-49 176
MS.gene69038.t1 MTR_7g446340 27.406 478 311 12 25 492 54 505 8.06e-48 174
MS.gene69038.t1 MTR_6g007340 27.406 478 311 12 25 492 54 505 8.06e-48 174
MS.gene69038.t1 MTR_1g116660 29.303 488 314 14 25 504 34 498 8.80e-48 173
MS.gene69038.t1 MTR_1g116650 30.913 482 286 12 25 497 77 520 1.95e-47 172
MS.gene69038.t1 MTR_3g084110 28.515 505 320 14 16 508 13 488 2.61e-47 171
MS.gene69038.t1 MTR_6g018790 29.512 471 298 11 19 485 98 538 4.95e-47 172
MS.gene69038.t1 MTR_5g096000 48.663 187 73 2 1 187 1 164 6.05e-47 166
MS.gene69038.t1 MTR_5g096000 49.254 134 68 0 377 510 176 309 2.11e-32 126
MS.gene69038.t1 MTR_4g077740 29.237 472 286 11 34 485 53 496 9.26e-47 170
MS.gene69038.t1 MTR_3g116240 27.536 483 301 11 28 485 29 487 1.03e-46 170
MS.gene69038.t1 MTR_2g013310 25.934 482 323 10 19 491 46 502 2.47e-46 169
MS.gene69038.t1 MTR_4g069500 24.748 497 333 9 28 504 31 506 3.00e-46 169
MS.gene69038.t1 MTR_5g075300 27.088 491 314 9 21 489 14 482 1.17e-45 167
MS.gene69038.t1 MTR_4g069500 26.392 413 284 6 111 504 45 456 1.61e-45 166
MS.gene69038.t1 MTR_8g077890 28.904 429 281 7 92 498 65 491 2.20e-45 166
MS.gene69038.t1 MTR_7g082270 27.692 455 301 8 32 485 71 498 9.73e-45 164
MS.gene69038.t1 MTR_2g013310 28.462 390 265 8 111 491 45 429 1.09e-44 163
MS.gene69038.t1 MTR_6g087910 29.288 379 251 6 111 485 117 482 2.31e-41 155
MS.gene69038.t1 MTR_4g013205 29.024 379 252 7 111 485 103 468 2.47e-41 155
MS.gene69038.t1 MTR_7g082270 28.715 397 256 7 32 428 71 440 3.91e-41 154
MS.gene69038.t1 MTR_5g077580 26.268 552 280 16 35 492 35 553 2.17e-40 154
MS.gene69038.t1 MTR_1g022315 27.317 410 284 7 86 490 89 489 1.83e-39 150
MS.gene69038.t1 MTR_3g074330 50.000 162 70 3 1 155 1 158 3.47e-39 140
MS.gene69038.t1 MTR_3g074360 50.000 162 70 3 1 155 1 158 3.47e-39 140
MS.gene69038.t1 MTR_2g026160 31.977 344 199 9 25 355 26 347 7.65e-39 149
MS.gene69038.t1 MTR_1g022315 27.068 399 277 7 97 490 1 390 8.37e-39 145
MS.gene69038.t1 MTR_8g077310 26.395 466 306 10 26 485 47 481 1.60e-38 147
MS.gene69038.t1 MTR_3g074310 49.383 162 71 3 1 155 1 158 1.75e-38 139
MS.gene69038.t1 MTR_3g080240 28.535 396 266 10 95 485 144 527 2.46e-38 147
MS.gene69038.t1 MTR_8g077310 27.089 395 271 8 97 485 1 384 8.22e-38 143
MS.gene69038.t1 MTR_5g020270 27.494 411 281 8 86 490 90 489 8.91e-38 145
MS.gene69038.t1 MTR_2g048720 31.065 338 204 7 35 365 35 350 1.10e-37 146
MS.gene69038.t1 MTR_7g113960 29.829 409 257 12 86 485 67 454 3.74e-37 143
MS.gene69038.t1 MTR_5g020270 27.250 400 274 8 97 490 1 389 4.06e-37 141
MS.gene69038.t1 MTR_2g049020 28.986 345 217 7 35 371 35 359 1.40e-36 143
MS.gene69038.t1 MTR_8g077300 26.439 469 304 11 25 485 38 473 1.69e-36 141
MS.gene69038.t1 MTR_1g038620 42.767 159 73 2 206 364 50 190 9.48e-36 132
MS.gene69038.t1 MTR_7g113970 29.710 414 253 12 86 485 102 491 1.77e-35 139
MS.gene69038.t1 MTR_7g094450 26.355 406 277 6 86 485 80 469 2.88e-35 137
MS.gene69038.t1 MTR_5g019870 27.373 453 291 9 81 509 50 488 3.76e-35 137
MS.gene69038.t1 MTR_4g118610 29.412 408 263 10 86 485 92 482 3.19e-33 132
MS.gene69038.t1 MTR_5g020270 26.683 416 257 9 86 490 90 468 1.37e-32 130
MS.gene69038.t1 MTR_0064s0040 43.478 138 66 1 18 155 16 141 4.63e-31 118
MS.gene69038.t1 MTR_7g094110 26.353 425 283 10 67 485 71 471 4.79e-31 125
MS.gene69038.t1 MTR_4g064820 28.184 369 226 9 26 376 96 443 2.04e-29 121
MS.gene69038.t1 MTR_2g020710 27.094 406 273 9 87 485 1 390 3.83e-29 119
MS.gene69038.t1 MTR_2g020710 27.451 408 271 10 86 485 89 479 4.65e-29 120
MS.gene69038.t1 MTR_2g026140 29.129 333 189 10 36 355 34 332 2.85e-28 119
MS.gene69038.t1 MTR_8g077310 28.472 288 193 6 86 370 87 364 1.75e-27 114
MS.gene69038.t1 MTR_4g069500 23.585 318 224 5 205 504 1 317 2.10e-26 110
MS.gene69038.t1 MTR_7g113960 30.935 278 168 9 86 355 67 328 3.19e-26 110
MS.gene69038.t1 MTR_7g094110 24.722 449 282 11 42 485 54 451 1.30e-24 107
MS.gene69038.t1 MTR_3g116060 32.308 195 121 3 77 263 31 222 4.52e-22 100
MS.gene69038.t1 MTR_3g116060 27.686 242 155 6 260 489 484 717 1.97e-12 70.1
MS.gene69038.t1 MTR_7g113970 28.060 335 206 11 86 406 102 415 6.15e-22 98.6
MS.gene69038.t1 MTR_4g118610 28.614 339 217 10 86 416 92 413 1.17e-21 97.8
MS.gene69038.t1 MTR_8g073100 27.966 236 157 4 79 306 39 269 7.45e-21 96.7
MS.gene69038.t1 MTR_8g073100 28.444 225 141 6 278 489 488 705 6.11e-11 65.5
MS.gene69038.t1 MTR_5g024740 28.033 239 151 4 26 262 4 223 1.50e-20 95.9
MS.gene69038.t1 MTR_5g044910 30.508 177 122 1 87 262 47 223 4.75e-20 94.4
MS.gene69038.t1 MTR_2g020710 26.113 337 226 9 86 415 89 409 2.38e-19 90.9
MS.gene69038.t1 MTR_1g114280 35.065 154 79 3 350 501 21 155 2.42e-19 85.5
MS.gene69038.t1 MTR_2g020710 26.549 339 224 10 86 416 89 410 2.45e-19 90.9
MS.gene69038.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 4.31e-19 91.3
MS.gene69038.t1 MTR_2g020710 28.571 273 174 8 86 351 89 347 5.91e-19 89.0
MS.gene69038.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 9.25e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69038.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene69038.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene69038.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene69038.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene69038.t1 AT5G26340 56.693 508 212 6 1 504 1 504 0.0 567
MS.gene69038.t1 AT3G19940 51.389 504 241 3 1 502 1 502 0.0 536
MS.gene69038.t1 AT1G50310 51.485 505 240 4 1 502 1 503 0.0 526
MS.gene69038.t1 AT1G11260 52.827 513 234 5 1 509 1 509 0.0 524
MS.gene69038.t1 AT1G77210 69.143 350 108 0 155 504 6 355 0.0 516
MS.gene69038.t1 AT5G23270 53.507 499 225 6 1 495 1 496 1.92e-178 511
MS.gene69038.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.98e-177 508
MS.gene69038.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.98e-177 508
MS.gene69038.t1 AT4G21480 53.909 486 219 4 18 500 15 498 2.46e-174 501
MS.gene69038.t1 AT5G26250 48.875 489 245 4 18 504 14 499 1.45e-164 476
MS.gene69038.t1 AT3G05960 47.284 497 259 3 14 509 9 503 5.16e-163 472
MS.gene69038.t1 AT5G61520 46.217 489 255 4 21 503 19 505 8.16e-156 454
MS.gene69038.t1 AT1G34580 44.618 511 269 8 1 503 1 505 2.45e-148 434
MS.gene69038.t1 AT1G07340 46.201 487 256 6 18 501 15 498 2.03e-147 432
MS.gene69038.t1 AT5G61520 45.415 458 242 4 52 503 2 457 1.56e-140 413
MS.gene69038.t1 AT1G34580 44.444 459 243 7 53 503 1 455 5.48e-133 394
MS.gene69038.t1 AT1G50310 49.858 351 172 3 155 502 11 360 1.11e-120 359
MS.gene69038.t1 AT2G16130 29.569 487 300 9 28 492 27 492 5.89e-57 198
MS.gene69038.t1 AT2G16120 28.953 487 303 9 28 492 27 492 8.56e-56 195
MS.gene69038.t1 AT4G36670 29.839 496 300 11 30 503 21 490 2.94e-54 190
MS.gene69038.t1 AT2G18480 30.998 471 281 12 40 489 36 483 5.64e-54 190
MS.gene69038.t1 AT3G18830 27.833 503 319 12 28 509 37 516 6.10e-54 190
MS.gene69038.t1 AT5G59250 29.586 507 307 14 3 485 72 552 3.62e-46 169
MS.gene69038.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene69038.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene69038.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene69038.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene69038.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene69038.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene69038.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene69038.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene69038.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene69038.t1 AT2G20780 27.912 498 315 16 13 497 42 508 1.04e-43 162
MS.gene69038.t1 AT2G43330 29.079 478 304 10 25 492 30 482 2.78e-43 160
MS.gene69038.t1 AT2G20780 30.238 420 269 14 91 497 42 450 1.31e-41 155
MS.gene69038.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.66e-41 155
MS.gene69038.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.66e-41 155
MS.gene69038.t1 AT3G03090 28.138 494 307 10 12 485 33 498 4.69e-41 154
MS.gene69038.t1 AT1G05030 30.340 412 269 11 82 487 64 463 1.77e-40 152
MS.gene69038.t1 AT1G05030 29.004 462 291 13 32 487 85 515 1.92e-40 153
MS.gene69038.t1 AT1G75220 28.117 409 281 6 86 490 88 487 3.56e-40 152
MS.gene69038.t1 AT2G48020 28.256 407 268 7 86 485 68 457 1.34e-39 149
MS.gene69038.t1 AT2G48020 28.256 407 268 7 86 485 68 457 1.34e-39 149
MS.gene69038.t1 AT1G19450 28.606 409 279 6 86 490 89 488 1.55e-39 150
MS.gene69038.t1 AT1G08900 28.642 405 269 8 86 485 23 412 1.47e-38 146
MS.gene69038.t1 AT3G05400 28.979 421 259 13 86 491 66 461 1.50e-38 147
MS.gene69038.t1 AT1G08900 28.642 405 269 8 86 485 57 446 2.99e-38 145
MS.gene69038.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.05e-38 146
MS.gene69038.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.05e-38 146
MS.gene69038.t1 AT1G67300 27.559 381 258 7 111 485 118 486 1.50e-37 144
MS.gene69038.t1 AT5G27360 28.364 483 284 13 19 485 28 464 3.02e-37 143
MS.gene69038.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.65e-37 142
MS.gene69038.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.65e-37 142
MS.gene69038.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.60e-37 142
MS.gene69038.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.60e-37 142
MS.gene69038.t1 AT5G27360 28.364 483 284 13 19 485 76 512 7.91e-37 143
MS.gene69038.t1 AT1G30220 29.775 356 223 9 7 355 10 345 7.97e-37 144
MS.gene69038.t1 AT5G27350 27.551 490 279 12 19 485 24 460 8.04e-37 142
MS.gene69038.t1 AT3G05400 30.750 400 227 15 117 491 67 441 1.02e-36 141
MS.gene69038.t1 AT3G05155 26.650 409 270 9 86 485 67 454 1.22e-36 141
MS.gene69038.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.63e-36 141
MS.gene69038.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.63e-36 141
MS.gene69038.t1 AT1G54730 27.475 404 275 8 86 485 72 461 1.98e-36 141
MS.gene69038.t1 AT4G04760 30.184 434 270 10 68 492 2 411 2.02e-36 140
MS.gene69038.t1 AT4G04750 29.016 386 258 8 111 492 145 518 3.62e-36 141
MS.gene69038.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene69038.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene69038.t1 AT3G05150 28.256 407 269 8 86 485 75 465 6.29e-36 140
MS.gene69038.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.04e-36 139
MS.gene69038.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.04e-36 139
MS.gene69038.t1 AT4G04760 30.184 434 270 10 68 492 61 470 7.22e-36 139
MS.gene69038.t1 AT1G08890 29.238 407 264 10 86 485 67 456 1.43e-35 138
MS.gene69038.t1 AT1G67300 27.586 319 219 5 111 427 118 426 2.10e-35 137
MS.gene69038.t1 AT1G67300 27.586 319 219 5 111 427 118 426 2.10e-35 137
MS.gene69038.t1 AT5G18840 29.657 408 262 10 86 485 84 474 3.59e-35 137
MS.gene69038.t1 AT1G79820 26.769 325 228 4 111 435 121 435 3.90e-35 137
MS.gene69038.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.18e-35 135
MS.gene69038.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.18e-35 135
MS.gene69038.t1 AT2G35740 27.763 371 227 9 25 381 25 368 5.20e-35 138
MS.gene69038.t1 AT3G05160 28.780 410 258 12 88 485 14 401 4.16e-34 133
MS.gene69038.t1 AT3G05160 28.780 410 258 12 88 485 14 401 4.16e-34 133
MS.gene69038.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene69038.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene69038.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene69038.t1 AT3G05160 28.780 410 258 12 88 485 63 450 8.35e-34 133
MS.gene69038.t1 AT1G08900 29.444 360 234 8 86 440 65 409 1.45e-32 129
MS.gene69038.t1 AT1G08920 26.214 412 270 10 86 485 72 461 2.02e-32 129
MS.gene69038.t1 AT4G04760 29.561 433 269 11 68 491 61 466 3.52e-32 129
MS.gene69038.t1 AT1G54730 26.667 360 246 8 86 441 72 417 1.80e-31 126
MS.gene69038.t1 AT1G08920 25.776 419 270 10 86 485 72 468 2.26e-31 127
MS.gene69038.t1 AT1G54730 25.743 404 261 8 86 485 72 440 1.39e-29 121
MS.gene69038.t1 AT3G20460 27.670 412 264 11 86 485 93 482 1.64e-28 119
MS.gene69038.t1 AT3G05165 29.552 335 194 12 111 429 95 403 2.77e-28 118
MS.gene69038.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.71e-28 117
MS.gene69038.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.71e-28 117
MS.gene69038.t1 AT1G08920 25.815 368 239 10 86 441 72 417 1.71e-27 115
MS.gene69038.t1 AT2G48020 29.066 289 184 6 86 367 68 342 1.28e-26 111
MS.gene69038.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.27e-25 109
MS.gene69038.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.44e-25 109
MS.gene69038.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.54e-25 107
MS.gene69038.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.54e-25 107
MS.gene69038.t1 AT3G51490 35.057 174 111 2 91 263 2 174 4.81e-25 109
MS.gene69038.t1 AT1G54730 24.722 360 232 8 86 441 72 396 1.01e-24 106
MS.gene69038.t1 AT3G05155 26.619 278 177 7 86 355 67 325 1.86e-24 104
MS.gene69038.t1 AT2G48020 29.286 280 170 6 86 355 68 329 1.90e-24 105
MS.gene69038.t1 AT1G79820 24.468 376 225 5 111 485 121 438 3.60e-24 105
MS.gene69038.t1 AT1G54730 26.374 273 187 5 86 355 72 333 9.75e-24 102
MS.gene69038.t1 AT5G27360 26.905 420 245 13 19 422 28 401 1.06e-23 103
MS.gene69038.t1 AT5G17010 24.540 489 271 13 12 485 30 435 4.11e-22 99.4
MS.gene69038.t1 AT1G79820 24.862 362 209 6 127 485 75 376 2.06e-21 96.7
MS.gene69038.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.57e-21 95.1
MS.gene69038.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.57e-21 95.1
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene69038.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene69038.t1 AT1G54730 25.498 251 176 4 86 333 72 314 2.19e-20 93.6
MS.gene69038.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.10e-19 90.9
MS.gene69038.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.10e-19 90.9

Find 100 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAACTTGCTTGGTTTC+TGG 0.107517 6.2:+86398769 None:intergenic
ACGAGACTGTTTGGTGTTTC+TGG 0.129924 6.2:+86400124 None:intergenic
TTCCTAAACATGTTGTTAAT+TGG 0.142023 6.2:+86400266 None:intergenic
GCAAGAAGATTCCGTATTTA+AGG 0.184615 6.2:+86398842 None:intergenic
GGATATGATCTTGGTGTTTC+AGG 0.205684 6.2:-86401451 MS.gene69038:intron
GCACTTGGTGGGGCTCTATT+TGG 0.217992 6.2:-86401472 MS.gene69038:CDS
AAATTCAGCATCAACATTTC+TGG 0.244849 6.2:+86400048 None:intergenic
CTTGGAGTTGGTATTGGATT+TGG 0.262672 6.2:-86400699 MS.gene69038:CDS
ATCATTGGACGTATTCTTCT+TGG 0.273716 6.2:-86400717 MS.gene69038:CDS
ATTGCTAACCTTGTGAATTA+TGG 0.277757 6.2:-86400238 MS.gene69038:CDS
GATCAGCATTGCTATATTCT+TGG 0.280820 6.2:+86400737 None:intergenic
TGCTTCCTCTCATACACATT+TGG 0.294387 6.2:+86400951 None:intergenic
CCAATTGTTTGGAAAATAAC+AGG 0.316014 6.2:+86399869 None:intergenic
GCTGCTCTTGTGTCCACATT+TGG 0.331542 6.2:-86400852 MS.gene69038:CDS
ATCTTCTGTTTGAGAATCAT+TGG 0.334480 6.2:-86398735 MS.gene69038:CDS
TGTTTGAGAATCATTGGTTT+TGG 0.335335 6.2:-86398729 MS.gene69038:CDS
TACACTCATCTCAATGGCTT+TGG 0.339050 6.2:-86399786 MS.gene69038:CDS
GCTCTATTTGGATATGATCT+TGG 0.350131 6.2:-86401460 MS.gene69038:CDS
CTTTATGAGCATAAGATAAC+TGG 0.354982 6.2:-86401523 MS.gene69038:CDS
GCAGATGACCTTATCTCTAA+TGG 0.355097 6.2:+86398940 None:intergenic
TTCCAATTAACAACATGTTT+AGG 0.357698 6.2:-86400268 MS.gene69038:CDS
CCAGCATTTCAACAACTAAC+TGG 0.358134 6.2:-86399917 MS.gene69038:CDS
GAAGATCTTGGGGTCCCTTA+GGG 0.359127 6.2:-86398987 MS.gene69038:CDS
GATTGCCACAGCTATAGTTT+TGG 0.362236 6.2:-86399097 MS.gene69038:CDS
ATGGCTTTGGTTGACAAGTT+TGG 0.363390 6.2:-86399773 MS.gene69038:CDS
GGAAGATCTTGGGGTCCCTT+AGG 0.366556 6.2:-86398988 MS.gene69038:CDS
CAGAGCCAAATCCAATTGTT+TGG 0.371830 6.2:+86399858 None:intergenic
TTGGGGTCCCTTAGGGTGGT+TGG 0.373657 6.2:-86398980 MS.gene69038:CDS
ATTCTTCTTGGAGTTGGTAT+TGG 0.373658 6.2:-86400705 MS.gene69038:CDS
CTCAAAAGAAGATTCTGAAA+TGG 0.375386 6.2:+86399980 None:intergenic
CCTTGTTCAACGAGACTGTT+TGG 0.377508 6.2:+86400115 None:intergenic
TCCTCTATATCTTTCAGAAA+TGG 0.385342 6.2:-86400326 MS.gene69038:CDS
CTCTTCAATTGGAACTTGCT+TGG 0.389604 6.2:+86398762 None:intergenic
TACTGAGAAAATTCATCCTT+GGG 0.394596 6.2:-86400215 MS.gene69038:CDS
CAAACAATTGGATTTGGCTC+TGG 0.401668 6.2:-86399857 MS.gene69038:CDS
GCTTCCTCTCATACACATTT+GGG 0.404907 6.2:+86400952 None:intergenic
GCATTATTGGAGCACTTGGT+GGG 0.409674 6.2:-86401483 MS.gene69038:CDS
TGCATTATTGGAGCACTTGG+TGG 0.411658 6.2:-86401484 MS.gene69038:CDS
ATGTTGTTAATTGGAATAGT+TGG 0.412733 6.2:+86400275 None:intergenic
AGAAGATAAATCTCTTCAAT+TGG 0.412850 6.2:+86398751 None:intergenic
GATGGAAAACAACTGTCATT+TGG 0.414524 6.2:-86399060 MS.gene69038:CDS
CCGATGAACATGAATGTTGC+TGG 0.414552 6.2:+86400160 None:intergenic
AGTAGACAAAGCAGCTCATA+AGG 0.415528 6.2:+86398800 None:intergenic
TTTGGCATATGGAAGATCTT+GGG 0.420424 6.2:-86398998 MS.gene69038:CDS
GTAGTGTTGGAAAAGATTAG+AGG 0.423770 6.2:-86400073 MS.gene69038:CDS
CTTGCTTGGTTTCTGGCAAT+AGG 0.429274 6.2:+86398776 None:intergenic
AATATAGCAATGCTGATCAT+TGG 0.436846 6.2:-86400732 MS.gene69038:CDS
CCAGTTAGTTGTTGAAATGC+TGG 0.437664 6.2:+86399917 None:intergenic
AACTCTTTCCATTAGAGATA+AGG 0.443050 6.2:-86398948 MS.gene69038:CDS
GGACGTATTCTTCTTGGAGT+TGG 0.452238 6.2:-86400711 MS.gene69038:CDS
TCACTTTGCCACCTTAAATA+CGG 0.453634 6.2:-86398853 MS.gene69038:CDS
GTACTGAGAAAATTCATCCT+TGG 0.465348 6.2:-86400216 MS.gene69038:CDS
TCTTGCATTATTGGAGCACT+TGG 0.467413 6.2:-86401487 MS.gene69038:CDS
GCCATTTCTGAAAGATATAG+AGG 0.470895 6.2:+86400325 None:intergenic
AATAGACCTCAATTCATCAT+TGG 0.473706 6.2:-86399953 MS.gene69038:CDS
CTACTCTTCCTTCATCGATT+CGG 0.476748 6.2:+86400092 None:intergenic
TGGGGATGGAGGTTATCTCT+AGG 0.477162 6.2:-86400196 MS.gene69038:CDS
TCTTGCTACACTCATCTCAA+TGG 0.483416 6.2:-86399792 MS.gene69038:CDS
ATAAAGATGAGCCCTCTTGA+GGG 0.508927 6.2:+86401540 None:intergenic
GATCTTGGGGTCCCTTAGGG+TGG 0.511703 6.2:-86398984 MS.gene69038:CDS
TTGGCATATGGAAGATCTTG+GGG 0.514199 6.2:-86398997 MS.gene69038:CDS
GAACAAGGCCGAATCGATGA+AGG 0.514991 6.2:-86400100 MS.gene69038:CDS
TGAATTTGATGATCTTATTG+AGG 0.516440 6.2:-86400032 MS.gene69038:CDS
CATTATTGGAGCACTTGGTG+GGG 0.519682 6.2:-86401482 MS.gene69038:CDS
CGATGAAGGAAGAGTAGTGT+TGG 0.519853 6.2:-86400086 MS.gene69038:CDS
AGAAAATTCATCCTTGGGGA+TGG 0.536487 6.2:-86400210 MS.gene69038:CDS
TTTAGCTTATGCTTGTGTCT+CGG 0.537950 6.2:+86398675 None:intergenic
CCAGCAACATTCATGTTCAT+CGG 0.541413 6.2:-86400160 MS.gene69038:CDS
CATAAAGATGAGCCCTCTTG+AGG 0.543236 6.2:+86401539 None:intergenic
CTTTGGTTGACAAGTTTGGT+AGG 0.544568 6.2:-86399769 MS.gene69038:CDS
TTCTATGAGGAAATCATCCA+TGG 0.553748 6.2:+86400980 None:intergenic
TATTGTCAAGGACGAAAACA+AGG 0.557245 6.2:-86398701 MS.gene69038:CDS
ACTAGGAACCAACCACCCTA+AGG 0.558058 6.2:+86398972 None:intergenic
AAAAGTTAGGGGAAAATGGC+AGG 0.558336 6.2:-86401586 None:intergenic
CACAGGTGGTGTTACTTCCA+TGG 0.565297 6.2:-86400997 MS.gene69038:intron
TCTAATGGAAAGAGTTCACT+AGG 0.569504 6.2:+86398955 None:intergenic
TAGACTTGAAGCACCAAATG+TGG 0.573480 6.2:+86400839 None:intergenic
CCAAACAGTCTCGTTGAACA+AGG 0.574070 6.2:-86400115 MS.gene69038:CDS
ATTGCACCAATGATGAATTG+AGG 0.586290 6.2:+86399947 None:intergenic
AAATTCATCCTTGGGGATGG+AGG 0.588295 6.2:-86400207 MS.gene69038:CDS
AGGAGAGCTAGTATCTTAGT+CGG 0.593291 6.2:-86400801 MS.gene69038:CDS
TCTTCCCAAATGTGTATGAG+AGG 0.597203 6.2:-86400956 MS.gene69038:CDS
CTAGGAACCAACCACCCTAA+GGG 0.605522 6.2:+86398973 None:intergenic
CATTTGGGAAGAATTCTATG+AGG 0.610161 6.2:+86400967 None:intergenic
GTCATCTGCACAAAGTGTTG+TGG 0.618223 6.2:-86398926 MS.gene69038:CDS
AAGGAAGAATTGTGCGACGA+TGG 0.620883 6.2:+86398879 None:intergenic
AGAAGATTCCGTATTTAAGG+TGG 0.621906 6.2:+86398845 None:intergenic
GCAGGTGGAGCATTTGCAGA+TGG 0.625709 6.2:-86401568 MS.gene69038:CDS
TCTCAGTACCATAATTCACA+AGG 0.628815 6.2:+86400230 None:intergenic
CAGATGGTAGCACCCTCAAG+AGG 0.631499 6.2:-86401552 MS.gene69038:CDS
TACTGAAATGATAATATGCA+TGG 0.645085 6.2:-86399723 MS.gene69038:intron
AGAGATAACCTCCATCCCCA+AGG 0.646035 6.2:+86400199 None:intergenic
AGATGGTAGCACCCTCAAGA+GGG 0.662568 6.2:-86401551 MS.gene69038:CDS
AGTAGCCAAAACTATAGCTG+TGG 0.663529 6.2:+86399092 None:intergenic
ATTGTCAAGGACGAAAACAA+GGG 0.664475 6.2:-86398700 MS.gene69038:CDS
GCAACATTCATGTTCATCGG+AGG 0.665148 6.2:-86400157 MS.gene69038:CDS
ACTGAGAAAATTCATCCTTG+GGG 0.680112 6.2:-86400214 MS.gene69038:CDS
TAAGGTGGCAAAGTGACACA+AGG 0.685068 6.2:+86398860 None:intergenic
AGTTAGGGGAAAATGGCAGG+TGG 0.686132 6.2:-86401583 None:intergenic
TTGTCAAGGACGAAAACAAG+GGG 0.689476 6.2:-86398699 MS.gene69038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTAGTATAAAAATTTAATA+TGG - chr6.2:86399740-86399759 MS.gene69038:CDS 10.0%
!! GATCTAAAAAAACAATTAAA+AGG - chr6.2:86400612-86400631 MS.gene69038:intron 15.0%
!!! CATGATTTTTCTAATTATTA+TGG - chr6.2:86399893-86399912 MS.gene69038:CDS 15.0%
!!! TAGAAAAAATTATCTAAAGT+AGG + chr6.2:86400767-86400786 None:intergenic 15.0%
!! AACGATTAATCATAAACTAA+TGG - chr6.2:86399210-86399229 MS.gene69038:intron 20.0%
!! AGAGTTTAATAACTATTGTT+GGG - chr6.2:86399597-86399616 MS.gene69038:intron 20.0%
!! TAAAATACAATCATCAATGA+AGG + chr6.2:86398945-86398964 None:intergenic 20.0%
!! TAGAGTTTAATAACTATTGT+TGG - chr6.2:86399596-86399615 MS.gene69038:intron 20.0%
!! TCACATAAATGCTTATTTAT+AGG + chr6.2:86401005-86401024 None:intergenic 20.0%
!! TGATTTCCTATTCTTATAAA+TGG + chr6.2:86398891-86398910 None:intergenic 20.0%
!!! AATTTGAGAATTTTTTTTGG+TGG - chr6.2:86401118-86401137 MS.gene69038:intron 20.0%
!!! AGTGATTTTCTTATTTGTTT+TGG - chr6.2:86401236-86401255 MS.gene69038:intron 20.0%
!!! ATTAACCATTCAATTTTGAA+AGG - chr6.2:86399064-86399083 MS.gene69038:CDS 20.0%
!!! ATTTTGCCATTTATAAGAAT+AGG - chr6.2:86398882-86398901 MS.gene69038:CDS 20.0%
!!! CAAAATTATGTTTCTACATT+AGG - chr6.2:86400693-86400712 MS.gene69038:CDS 20.0%
!!! CTAATGTAGAAACATAATTT+TGG + chr6.2:86400695-86400714 None:intergenic 20.0%
!!! GCTAATTTGAGAATTTTTTT+TGG - chr6.2:86401115-86401134 MS.gene69038:intron 20.0%
! AGAAGATAAATCTCTTCAAT+TGG + chr6.2:86401504-86401523 None:intergenic 25.0%
! ATGTTGTTAATTGGAATAGT+TGG + chr6.2:86399980-86399999 None:intergenic 25.0%
! GGCAAAATCAAAATTTGTAT+TGG + chr6.2:86398870-86398889 None:intergenic 25.0%
! TACTGAAATGATAATATGCA+TGG - chr6.2:86400529-86400548 MS.gene69038:intron 25.0%
! TCAAATTAGCAACAAAAAAG+TGG + chr6.2:86401105-86401124 None:intergenic 25.0%
! TCAAGTCTAACAAAAAACAA+AGG - chr6.2:86399427-86399446 MS.gene69038:intron 25.0%
! TGTCCTCAAGATAAAAAATA+TGG - chr6.2:86399849-86399868 MS.gene69038:CDS 25.0%
! TTCCAATTAACAACATGTTT+AGG - chr6.2:86399984-86400003 MS.gene69038:CDS 25.0%
! TTCCTAAACATGTTGTTAAT+TGG + chr6.2:86399989-86400008 None:intergenic 25.0%
! TTCTAAATAAACTAGTTGCT+TGG - chr6.2:86400782-86400801 MS.gene69038:CDS 25.0%
! TTGTGCAAAAACAATTTGTA+AGG + chr6.2:86399710-86399729 None:intergenic 25.0%
!! ATCTAAAGTAGGTTAAAACA+GGG + chr6.2:86400756-86400775 None:intergenic 25.0%
!! ATTTTCCAAACAATTGGATT+TGG - chr6.2:86400389-86400408 MS.gene69038:intron 25.0%
!! CTCATATTTTCTTGCATTAT+TGG - chr6.2:86398756-86398775 MS.gene69038:CDS 25.0%
!! TATCTAAAGTAGGTTAAAAC+AGG + chr6.2:86400757-86400776 None:intergenic 25.0%
!! TCTTAATAGATTTTGCTTCT+CGG + chr6.2:86400250-86400269 None:intergenic 25.0%
!! TGAATTTGATGATCTTATTG+AGG - chr6.2:86400220-86400239 MS.gene69038:CDS 25.0%
!! TGATAATTTAGAGTTTAGTC+AGG - chr6.2:86399129-86399148 MS.gene69038:intron 25.0%
!! TGCATTAATCACAAAGTATT+TGG + chr6.2:86399801-86399820 None:intergenic 25.0%
!! TTTTCTAATTATTATGGTGC+AGG - chr6.2:86399899-86399918 MS.gene69038:CDS 25.0%
!!! TGACAAAAGATTGTTTTAGT+CGG - chr6.2:86399165-86399184 MS.gene69038:intron 25.0%
!!! TGACCATATTTTTTATCTTG+AGG + chr6.2:86399855-86399874 None:intergenic 25.0%
!!! TTCTTATTTGTTTTGGCATA+TGG - chr6.2:86401243-86401262 MS.gene69038:intron 25.0%
AAATTCAGCATCAACATTTC+TGG + chr6.2:86400207-86400226 None:intergenic 30.0%
AACTCTTTCCATTAGAGATA+AGG - chr6.2:86401304-86401323 MS.gene69038:intron 30.0%
AATAGACCTCAATTCATCAT+TGG - chr6.2:86400299-86400318 MS.gene69038:CDS 30.0%
AATATAGCAATGCTGATCAT+TGG - chr6.2:86399520-86399539 MS.gene69038:intron 30.0%
ATCTTCTGTTTGAGAATCAT+TGG - chr6.2:86401517-86401536 MS.gene69038:CDS 30.0%
ATTGCTAACCTTGTGAATTA+TGG - chr6.2:86400014-86400033 MS.gene69038:CDS 30.0%
CCAATTGTTTGGAAAATAAC+AGG + chr6.2:86400386-86400405 None:intergenic 30.0%
CTTATTTCCATAAGCTCAAT+AGG - chr6.2:86400903-86400922 MS.gene69038:CDS 30.0%
CTTTATGAGCATAAGATAAC+TGG - chr6.2:86398729-86398748 MS.gene69038:CDS 30.0%
GTCTAACAAAAAACAAAGGA+AGG - chr6.2:86399431-86399450 MS.gene69038:intron 30.0%
TACTGAGAAAATTCATCCTT+GGG - chr6.2:86400037-86400056 MS.gene69038:CDS 30.0%
TCCTCTATATCTTTCAGAAA+TGG - chr6.2:86399926-86399945 MS.gene69038:CDS 30.0%
TCTCAGATTGAATAGAGATA+AGG - chr6.2:86399650-86399669 MS.gene69038:intron 30.0%
TTTATCTTGAGGACATGTTA+AGG + chr6.2:86399844-86399863 None:intergenic 30.0%
! AAGTATTTCTTGATGATCAC+AGG - chr6.2:86399238-86399257 MS.gene69038:intron 30.0%
! CTCAAAAGAAGATTCTGAAA+TGG + chr6.2:86400275-86400294 None:intergenic 30.0%
!! CTCTATTCAATCTGAGATTT+TGG + chr6.2:86399647-86399666 None:intergenic 30.0%
!! TGTTTTTGCACAAATGAGTT+AGG - chr6.2:86399717-86399736 MS.gene69038:intron 30.0%
!!! ATAGTTTTGGCTACTTGTTT+TGG - chr6.2:86401168-86401187 MS.gene69038:intron 30.0%
!!! CCTGTTATTTTCCAAACAAT+TGG - chr6.2:86400383-86400402 MS.gene69038:intron 30.0%
!!! GTTTTGGAAGAATATTGTCA+AGG - chr6.2:86401539-86401558 MS.gene69038:CDS 30.0%
!!! TGTTTGAGAATCATTGGTTT+TGG - chr6.2:86401523-86401542 MS.gene69038:CDS 30.0%
AAGCTATCCTATTGAGCTTA+TGG + chr6.2:86400913-86400932 None:intergenic 35.0%
ACTACCTAAAATTTCCCCAA+GGG + chr6.2:86399015-86399034 None:intergenic 35.0%
ACTGAGAAAATTCATCCTTG+GGG - chr6.2:86400038-86400057 MS.gene69038:CDS 35.0%
AGAAGATTCCGTATTTAAGG+TGG + chr6.2:86401410-86401429 None:intergenic 35.0%
ATCATTGGACGTATTCTTCT+TGG - chr6.2:86399535-86399554 MS.gene69038:intron 35.0%
ATTGCACCAATGATGAATTG+AGG + chr6.2:86400308-86400327 None:intergenic 35.0%
ATTGTCAAGGACGAAAACAA+GGG - chr6.2:86401552-86401571 MS.gene69038:CDS 35.0%
CATTTGGGAAGAATTCTATG+AGG + chr6.2:86399288-86399307 None:intergenic 35.0%
GAAACGAAAACTCATGTGTT+TGG + chr6.2:86399771-86399790 None:intergenic 35.0%
GATCAGCATTGCTATATTCT+TGG + chr6.2:86399518-86399537 None:intergenic 35.0%
GATGGAAAACAACTGTCATT+TGG - chr6.2:86401192-86401211 MS.gene69038:intron 35.0%
GCAAGAAGATTCCGTATTTA+AGG + chr6.2:86401413-86401432 None:intergenic 35.0%
GCGTTCCTTTCAAAATTGAA+TGG + chr6.2:86399072-86399091 None:intergenic 35.0%
GCTCTATTTGGATATGATCT+TGG - chr6.2:86398792-86398811 MS.gene69038:CDS 35.0%
GTACTGAGAAAATTCATCCT+TGG - chr6.2:86400036-86400055 MS.gene69038:CDS 35.0%
TACTACCTAAAATTTCCCCA+AGG + chr6.2:86399016-86399035 None:intergenic 35.0%
TATTGTCAAGGACGAAAACA+AGG - chr6.2:86401551-86401570 MS.gene69038:CDS 35.0%
TCACTTTGCCACCTTAAATA+CGG - chr6.2:86401399-86401418 MS.gene69038:intron 35.0%
TCTAATGGAAAGAGTTCACT+AGG + chr6.2:86401300-86401319 None:intergenic 35.0%
TCTCAGTACCATAATTCACA+AGG + chr6.2:86400025-86400044 None:intergenic 35.0%
TTCTATGAGGAAATCATCCA+TGG + chr6.2:86399275-86399294 None:intergenic 35.0%
TTTGGCATATGGAAGATCTT+GGG - chr6.2:86401254-86401273 MS.gene69038:intron 35.0%
! AAATGCTAACTTGTGCCTTA+AGG + chr6.2:86400733-86400752 None:intergenic 35.0%
! GCCATTTCTGAAAGATATAG+AGG + chr6.2:86399930-86399949 None:intergenic 35.0%
! GTAGTGTTGGAAAAGATTAG+AGG - chr6.2:86400179-86400198 MS.gene69038:CDS 35.0%
! TATTTCTTGATGATCACAGG+TGG - chr6.2:86399241-86399260 MS.gene69038:intron 35.0%
! TTTTGGCATATGGAAGATCT+TGG - chr6.2:86401253-86401272 MS.gene69038:intron 35.0%
!! ATTCTTCTTGGAGTTGGTAT+TGG - chr6.2:86399547-86399566 MS.gene69038:intron 35.0%
!!! GGTTCTGTAAGCTTTTTTTG+TGG - chr6.2:86399472-86399491 MS.gene69038:intron 35.0%
AGAAAATTCATCCTTGGGGA+TGG - chr6.2:86400042-86400061 MS.gene69038:CDS 40.0%
AGGAGAGCTAGTATCTTAGT+CGG - chr6.2:86399451-86399470 MS.gene69038:intron 40.0%
AGTAGACAAAGCAGCTCATA+AGG + chr6.2:86401455-86401474 None:intergenic 40.0%
AGTAGCCAAAACTATAGCTG+TGG + chr6.2:86401163-86401182 None:intergenic 40.0%
ATAAAGATGAGCCCTCTTGA+GGG + chr6.2:86398715-86398734 None:intergenic 40.0%
ATGGCACCAGCAAAAATTAG+AGG - chr6.2:86399945-86399964 MS.gene69038:CDS 40.0%
CAGAGCCAAATCCAATTGTT+TGG + chr6.2:86400397-86400416 None:intergenic 40.0%
CCAGCAACATTCATGTTCAT+CGG - chr6.2:86400092-86400111 MS.gene69038:CDS 40.0%
CCAGCATTTCAACAACTAAC+TGG - chr6.2:86400335-86400354 MS.gene69038:intron 40.0%
CCAGTTAGTTGTTGAAATGC+TGG + chr6.2:86400338-86400357 None:intergenic 40.0%
CTACCTAAAATTTCCCCAAG+GGG + chr6.2:86399014-86399033 None:intergenic 40.0%
CTTTGGTTGACAAGTTTGGT+AGG - chr6.2:86400483-86400502 MS.gene69038:intron 40.0%
GCAGATGACCTTATCTCTAA+TGG + chr6.2:86401315-86401334 None:intergenic 40.0%
GCTTCCTCTCATACACATTT+GGG + chr6.2:86399303-86399322 None:intergenic 40.0%
TACACTCATCTCAATGGCTT+TGG - chr6.2:86400466-86400485 MS.gene69038:intron 40.0%
TCTTCCCAAATGTGTATGAG+AGG - chr6.2:86399296-86399315 MS.gene69038:intron 40.0%
TCTTGCTACACTCATCTCAA+TGG - chr6.2:86400460-86400479 MS.gene69038:intron 40.0%
TGCTTCCTCTCATACACATT+TGG + chr6.2:86399304-86399323 None:intergenic 40.0%
TTGGCATATGGAAGATCTTG+GGG - chr6.2:86401255-86401274 MS.gene69038:intron 40.0%
TTGTCAAGGACGAAAACAAG+GGG - chr6.2:86401553-86401572 MS.gene69038:CDS 40.0%
! AATGCTAACTCGTGTCGTTA+GGG - chr6.2:86400578-86400597 MS.gene69038:intron 40.0%
! ACTGCTCCTCTAATTTTTGC+TGG + chr6.2:86399954-86399973 None:intergenic 40.0%
! ATTGGAACTTGCTTGGTTTC+TGG + chr6.2:86401486-86401505 None:intergenic 40.0%
! CAAACAATTGGATTTGGCTC+TGG - chr6.2:86400395-86400414 MS.gene69038:intron 40.0%
! CTACTCTTCCTTCATCGATT+CGG + chr6.2:86400163-86400182 None:intergenic 40.0%
! CTCTTCAATTGGAACTTGCT+TGG + chr6.2:86401493-86401512 None:intergenic 40.0%
! GATTGCCACAGCTATAGTTT+TGG - chr6.2:86401155-86401174 MS.gene69038:intron 40.0%
! TAATGCTAACTCGTGTCGTT+AGG - chr6.2:86400577-86400596 MS.gene69038:intron 40.0%
! TAGACTTGAAGCACCAAATG+TGG + chr6.2:86399416-86399435 None:intergenic 40.0%
! TCTTGCATTATTGGAGCACT+TGG - chr6.2:86398765-86398784 MS.gene69038:CDS 40.0%
! TGGTAGGAGAGCTTTCTTTT+TGG - chr6.2:86400499-86400518 MS.gene69038:intron 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG - chr6.2:86400506-86400525 MS.gene69038:intron 40.0%
!! ATGGCTTTGGTTGACAAGTT+TGG - chr6.2:86400479-86400498 MS.gene69038:intron 40.0%
!! CTTGGAGTTGGTATTGGATT+TGG - chr6.2:86399553-86399572 MS.gene69038:intron 40.0%
!! GCTTCTTAACTTGTGCCTTA+AGG - chr6.2:86400715-86400734 MS.gene69038:CDS 40.0%
!! GGATATGATCTTGGTGTTTC+AGG - chr6.2:86398801-86398820 MS.gene69038:CDS 40.0%
!!! TTGGCTACTTGTTTTGGAGA+TGG - chr6.2:86401174-86401193 MS.gene69038:intron 40.0%
AAATTCATCCTTGGGGATGG+AGG - chr6.2:86400045-86400064 MS.gene69038:CDS 45.0%
AAGGAAGAATTGTGCGACGA+TGG + chr6.2:86401376-86401395 None:intergenic 45.0%
CATAAAGATGAGCCCTCTTG+AGG + chr6.2:86398716-86398735 None:intergenic 45.0%
CCAAACAGTCTCGTTGAACA+AGG - chr6.2:86400137-86400156 MS.gene69038:CDS 45.0%
CCGATGAACATGAATGTTGC+TGG + chr6.2:86400095-86400114 None:intergenic 45.0%
CCTTGTTCAACGAGACTGTT+TGG + chr6.2:86400140-86400159 None:intergenic 45.0%
CGATGAAGGAAGAGTAGTGT+TGG - chr6.2:86400166-86400185 MS.gene69038:CDS 45.0%
GCAACATTCATGTTCATCGG+AGG - chr6.2:86400095-86400114 MS.gene69038:CDS 45.0%
GGACGTATTCTTCTTGGAGT+TGG - chr6.2:86399541-86399560 MS.gene69038:intron 45.0%
TAAGGTGGCAAAGTGACACA+AGG + chr6.2:86401395-86401414 None:intergenic 45.0%
! CATTATTGGAGCACTTGGTG+GGG - chr6.2:86398770-86398789 MS.gene69038:CDS 45.0%
! GAACCCCTTGGGGAAATTTT+AGG - chr6.2:86399008-86399027 MS.gene69038:CDS 45.0%
! GCATTATTGGAGCACTTGGT+GGG - chr6.2:86398769-86398788 MS.gene69038:CDS 45.0%
! TGCATTATTGGAGCACTTGG+TGG - chr6.2:86398768-86398787 MS.gene69038:CDS 45.0%
!! ACGAGACTGTTTGGTGTTTC+TGG + chr6.2:86400131-86400150 None:intergenic 45.0%
!! CTTGCTTGGTTTCTGGCAAT+AGG + chr6.2:86401479-86401498 None:intergenic 45.0%
!! GTCATCTGCACAAAGTGTTG+TGG - chr6.2:86401326-86401345 MS.gene69038:intron 45.0%
ACTAGGAACCAACCACCCTA+AGG + chr6.2:86401283-86401302 None:intergenic 50.0%
AGAGATAACCTCCATCCCCA+AGG + chr6.2:86400056-86400075 None:intergenic 50.0%
AGATGGTAGCACCCTCAAGA+GGG - chr6.2:86398701-86398720 MS.gene69038:CDS 50.0%
CCAAGGGGTTCACTTGAAAG+GGG + chr6.2:86398999-86399018 None:intergenic 50.0%
CCCAAGGGGTTCACTTGAAA+GGG + chr6.2:86399000-86399019 None:intergenic 50.0%
CTAGGAACCAACCACCCTAA+GGG + chr6.2:86401282-86401301 None:intergenic 50.0%
GAACAAGGCCGAATCGATGA+AGG - chr6.2:86400152-86400171 MS.gene69038:CDS 50.0%
GAAGATCTTGGGGTCCCTTA+GGG - chr6.2:86401265-86401284 MS.gene69038:intron 50.0%
GCTGCTCTTGTGTCCACATT+TGG - chr6.2:86399400-86399419 MS.gene69038:intron 50.0%
TGGGGATGGAGGTTATCTCT+AGG - chr6.2:86400056-86400075 MS.gene69038:CDS 50.0%
! CCCTTTCAAGTGAACCCCTT+GGG - chr6.2:86398997-86399016 MS.gene69038:CDS 50.0%
! CCTTTCAAGTGAACCCCTTG+GGG - chr6.2:86398998-86399017 MS.gene69038:CDS 50.0%
!! CACAGGTGGTGTTACTTCCA+TGG - chr6.2:86399255-86399274 MS.gene69038:intron 50.0%
CAGATGGTAGCACCCTCAAG+AGG - chr6.2:86398700-86398719 MS.gene69038:CDS 55.0%
CCCCAAGGGGTTCACTTGAA+AGG + chr6.2:86399001-86399020 None:intergenic 55.0%
GGAAGATCTTGGGGTCCCTT+AGG - chr6.2:86401264-86401283 MS.gene69038:intron 55.0%
! CCCCTTTCAAGTGAACCCCT+TGG - chr6.2:86398996-86399015 MS.gene69038:CDS 55.0%
! GCACTTGGTGGGGCTCTATT+TGG - chr6.2:86398780-86398799 MS.gene69038:CDS 55.0%
! GCAGGTGGAGCATTTGCAGA+TGG - chr6.2:86398684-86398703 MS.gene69038:CDS 55.0%
GATCTTGGGGTCCCTTAGGG+TGG - chr6.2:86401268-86401287 MS.gene69038:intron 60.0%
TTGGGGTCCCTTAGGGTGGT+TGG - chr6.2:86401272-86401291 MS.gene69038:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 86398681 86401593 86398681 ID=MS.gene69038
chr6.2 mRNA 86398681 86401593 86398681 ID=MS.gene69038.t1;Parent=MS.gene69038
chr6.2 exon 86401452 86401593 86401452 ID=MS.gene69038.t1.exon1;Parent=MS.gene69038.t1
chr6.2 CDS 86401452 86401593 86401452 ID=cds.MS.gene69038.t1;Parent=MS.gene69038.t1
chr6.2 exon 86400692 86401014 86400692 ID=MS.gene69038.t1.exon2;Parent=MS.gene69038.t1
chr6.2 CDS 86400692 86401014 86400692 ID=cds.MS.gene69038.t1;Parent=MS.gene69038.t1
chr6.2 exon 86399724 86400353 86399724 ID=MS.gene69038.t1.exon3;Parent=MS.gene69038.t1
chr6.2 CDS 86399724 86400353 86399724 ID=cds.MS.gene69038.t1;Parent=MS.gene69038.t1
chr6.2 exon 86398681 86399118 86398681 ID=MS.gene69038.t1.exon4;Parent=MS.gene69038.t1
chr6.2 CDS 86398681 86399118 86398681 ID=cds.MS.gene69038.t1;Parent=MS.gene69038.t1
Gene Sequence

>MS.gene69038

ATGGCAGGTGGAGCATTTGCAGATGGTAGCACCCTCAAGAGGGCTCATCTTTATGAGCATAAGATAACTGGATATCTCATATTTTCTTGCATTATTGGAGCACTTGGTGGGGCTCTATTTGGATATGATCTTGGTGTTTCAGGTGAGTTCAACTTAATTGTAAATCTCGTTATTATTAAAAATAAACCAATACAAATTTTGATTTTGCCATTTATAAGAATAGGAAATCATTTTCAAAGAAAAATTGAAAAGTTTATATAACCTTCATTGATGATTGTATTTTATCACAAGTTAAATATAACTCAACTTTTTTTTCCCCTTTCAAGTGAACCCCTTGGGGAAATTTTAGGTAGTAATTTGCAAATCACATATATATATTTTTTATTAACCATTCAATTTTGAAAGGAACGCACTCTTGATAATTTAGAGTTCAGTCACAACACATACTTGATAATTTAGAGTTTAGTCAGGAATAAATAAAGTTTGACAAAAGATTGTTTTAGTCGGAATTTAAATTTGAGTTCTTTTGAACGATTAATCATAAACTAATGGTATGAAAGTATTTCTTGATGATCACAGGTGGTGTTACTTCCATGGATGATTTCCTCATAGAATTCTTCCCAAATGTGTATGAGAGGAAGCATGCAAAACTTCAAGAAACAGATTATTGTAAATATGATGATCAAATATTGACACTATTTACTTCATCTCTCTACTTTGCTGCTCTTGTGTCCACATTTGGTGCTTCAAGTCTAACAAAAAACAAAGGAAGGAGAGCTAGTATCTTAGTCGGTTCTGTAAGCTTTTTTTGTGGAGCTATTCTCAATGCAGCTGCCAAGAATATAGCAATGCTGATCATTGGACGTATTCTTCTTGGAGTTGGTATTGGATTTGGAAATCAAGTAAGTTTAATTTTAGAGTTTAATAACTATTGTTGGGCGTGAGAGAGTATATAGAGAAAAACCAAAATCTCAGATTGAATAGAGATAAGGTCTTACATGAGTTTATAAAGATAGAAACACATCACCTTACAAATTGTTTTTGCACAAATGAGTTAGGCTTAGTATAAAAATTTAATATGGTGTCACCAAACACATGAGTTTTCGTTTCTTGTTCACCAAATACTTTGTGATTAATGCATAGTTAGTACTTTTTTTTTACCTTAACATGTCCTCAAGATAAAAAATATGGTCACAAATTTTACTCGCATATCATGATTTTTCTAATTATTATGGTGCAGGCTGTTCCTCTATATCTTTCAGAAATGGCACCAGCAAAAATTAGAGGAGCAGTGAACCAACTATTCCAATTAACAACATGTTTAGGAATTTTGATTGCTAACCTTGTGAATTATGGTACTGAGAAAATTCATCCTTGGGGATGGAGGTTATCTCTAGGTTTAGCAACAGTTCCAGCAACATTCATGTTCATCGGAGGCGTTTTTTGTCCAGAAACACCAAACAGTCTCGTTGAACAAGGCCGAATCGATGAAGGAAGAGTAGTGTTGGAAAAGATTAGAGGAACCAGAAATGTTGATGCTGAATTTGATGATCTTATTGAGGCTAGCCGAGAAGCAAAATCTATTAAGAATCCATTTCAGAATCTTCTTTTGAGAAAGAATAGACCTCAATTCATCATTGGTGCAATTTGTATTCCAGCATTTCAACAACTAACTGGAAACAACTCTATTCTATTCTATGCTCCTGTTATTTTCCAAACAATTGGATTTGGCTCTGGTGCATCTCTATATTCATCTGTTATTACAAGTGTTGCTCTTGTTCTTGCTACACTCATCTCAATGGCTTTGGTTGACAAGTTTGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTACTGAAATGATAATATGCATGGTAATTACATCTTTCATATATATTATTAATGCTAACTCGTGTCGTTAGGGCACATATTATTGATCTAAAAAAACAATTAAAAGGTAAATTTTGTATTGAAAAAAAAGTTTTTAAGCTTTCAAGATATTGAATGTACAATTTCCAAAATTATGTTTCTACATTAGGCTTCTTAACTTGTGCCTTAAGGCACAAGTTAGCATTTCCCTGTTTTAACCTACTTTAGATAATTTTTTCTAAATAAACTAGTTGCTTGGATTGACGTGTTTTAGCTTATCTACTCACATAAACACTTGAAAACTGTCTAAAAGTGCTTATAAAAACAACTAATGACACATTCATAAGTTATTTTCAGCTTATTTCCATAAGCTCAATAGGATAGCTTATGAAAACAGCTTATTACTTTTATGAAAACAGTTTGTCTCTATTGTTATCTTTTTTGTTACAGAAATAACCTATAAATAAGCATTTATGTGATAAAAACTTATGCTATACGTGTTTGATGTTTATGCAAAGAGAACGTGAAATGAAAAATAAAACATGACTGATATACACCACTTTTTTGTTGCTAATTTGAGAATTTTTTTTGGTGGTTGTGAAATTTGCAGATTGCCACAGCTATAGTTTTGGCTACTTGTTTTGGAGATGGAAAACAACTGTCATTTGGAGTTGCTATCTTTCTAGTTTTAGTGATTTTCTTATTTGTTTTGGCATATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCTAGTGAACTCTTTCCATTAGAGATAAGGTCATCTGCACAAAGTGTTGTGGTCTGTGTCAACATGATCTTCACAGCCATCGTCGCACAATTCTTCCTTGTGTCACTTTGCCACCTTAAATACGGAATCTTCTTGCTTTTTGCTGCATTGATTGTCCTTATGAGCTGCTTTGTCTACTTCCTATTGCCAGAAACCAAGCAAGTTCCAATTGAAGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAATATTGTCAAGGACGAAAACAAGGGGTCCGAGACACAAGCATAA
Protein sequence

>MS.gene69038.t1

MAGGAFADGSTLKRAHLYEHKITGYLIFSCIIGALGGALFGYDLGVSGGVTSMDDFLIEFFPNVYERKHAKLQETDYCKYDDQILTLFTSSLYFAALVSTFGASSLTKNKGRRASILVGSVSFFCGAILNAAAKNIAMLIIGRILLGVGIGFGNQAVPLYLSEMAPAKIRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPATFMFIGGVFCPETPNSLVEQGRIDEGRVVLEKIRGTRNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQFIIGAICIPAFQQLTGNNSILFYAPVIFQTIGFGSGASLYSSVITSVALVLATLISMALVDKFGRRAFFLEAGTEMIICMIATAIVLATCFGDGKQLSFGVAIFLVLVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVYFLLPETKQVPIEEIYLLFENHWFWKNIVKDENKGSETQA