AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69039

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69039.t1 MTR_6g087040 97.843 510 11 0 1 510 1 510 0.0 1018
MS.gene69039.t1 MTR_6g088375 97.843 510 11 0 1 510 1 510 0.0 1018
MS.gene69039.t1 MTR_8g102860 76.660 497 113 1 13 506 13 509 0.0 792
MS.gene69039.t1 MTR_8g102860 76.368 457 105 1 53 506 1 457 0.0 720
MS.gene69039.t1 MTR_0204s0020 58.215 493 202 3 8 499 3 492 0.0 613
MS.gene69039.t1 MTR_0204s0020 57.809 493 201 4 8 499 3 489 0.0 603
MS.gene69039.t1 MTR_7g091690 58.683 501 202 4 1 499 1 498 0.0 599
MS.gene69039.t1 MTR_5g094760 57.115 506 212 4 1 504 1 503 0.0 595
MS.gene69039.t1 MTR_0204s0040 55.624 489 215 2 14 502 17 503 0.0 588
MS.gene69039.t1 MTR_4g116770 55.624 489 215 2 14 502 213 699 0.0 587
MS.gene69039.t1 MTR_4g116790 55.200 500 220 3 3 502 6 501 0.0 576
MS.gene69039.t1 MTR_5g006070 57.317 492 203 6 18 504 14 503 0.0 565
MS.gene69039.t1 MTR_3g008160 53.347 493 227 3 18 508 15 506 0.0 530
MS.gene69039.t1 MTR_1g038630 52.559 508 233 5 1 505 1 503 0.0 523
MS.gene69039.t1 MTR_5g006070 56.674 457 191 6 53 504 1 455 0.0 518
MS.gene69039.t1 MTR_1g104780 53.360 506 227 6 1 502 1 501 1.52e-177 509
MS.gene69039.t1 MTR_1g104750 50.400 500 241 5 1 497 1 496 3.14e-177 508
MS.gene69039.t1 MTR_5g082540 52.567 487 226 4 18 501 15 499 2.61e-176 506
MS.gene69039.t1 MTR_0009s0370 52.439 492 228 4 18 504 13 503 6.00e-176 505
MS.gene69039.t1 MTR_1g104770 50.299 501 241 6 1 497 1 497 6.48e-175 502
MS.gene69039.t1 MTR_3g093010 52.437 513 231 7 1 505 1 508 4.11e-174 500
MS.gene69039.t1 MTR_5g041550 51.845 515 237 6 1 509 1 510 6.87e-174 500
MS.gene69039.t1 MTR_3g023480 51.710 497 230 5 15 504 10 503 1.23e-173 499
MS.gene69039.t1 MTR_4g091370 53.024 496 228 3 18 509 15 509 2.42e-171 493
MS.gene69039.t1 MTR_3g008160 53.057 458 212 3 53 508 1 457 5.84e-170 488
MS.gene69039.t1 MTR_3g008170 50.101 493 238 5 21 506 18 509 1.62e-169 488
MS.gene69039.t1 MTR_1g038600 49.704 507 231 6 1 505 1 485 4.21e-166 479
MS.gene69039.t1 MTR_3g007910 48.444 514 225 7 1 510 1 478 1.99e-160 464
MS.gene69039.t1 MTR_4g090600 52.941 493 227 4 18 506 15 506 7.81e-160 464
MS.gene69039.t1 MTR_3g074390 46.955 509 261 8 1 503 1 506 1.55e-159 463
MS.gene69039.t1 MTR_3g074410 45.365 507 269 8 1 503 1 503 1.03e-157 458
MS.gene69039.t1 MTR_3g074270 47.012 502 239 7 1 500 1 477 2.90e-156 454
MS.gene69039.t1 MTR_4g116790 55.220 364 159 3 3 366 6 365 6.68e-150 434
MS.gene69039.t1 MTR_3g093060 49.666 449 219 4 53 495 1 448 4.96e-146 427
MS.gene69039.t1 MTR_3g074380 46.612 369 192 5 1 367 1 366 1.93e-110 333
MS.gene69039.t1 MTR_3g074370 42.405 316 176 6 191 502 20 333 7.73e-88 273
MS.gene69039.t1 MTR_3g074340 42.089 316 177 6 191 502 20 333 1.11e-87 273
MS.gene69039.t1 MTR_3g074320 42.089 316 177 6 191 502 20 333 2.96e-87 272
MS.gene69039.t1 MTR_3g074400 36.044 455 232 11 53 483 1 420 1.10e-76 247
MS.gene69039.t1 MTR_6g088450 26.722 479 309 12 13 478 50 499 3.96e-53 187
MS.gene69039.t1 MTR_8g103500 26.044 503 336 11 21 510 13 492 7.87e-53 186
MS.gene69039.t1 MTR_4g072030 28.310 491 302 13 28 493 26 491 1.88e-50 181
MS.gene69039.t1 MTR_7g005910 30.146 481 303 13 25 497 32 487 5.19e-49 176
MS.gene69039.t1 MTR_1g116660 29.303 488 314 14 25 504 34 498 7.11e-48 173
MS.gene69039.t1 MTR_7g446340 27.406 478 311 12 25 492 54 505 7.74e-48 174
MS.gene69039.t1 MTR_6g007340 27.406 478 311 12 25 492 54 505 7.74e-48 174
MS.gene69039.t1 MTR_1g116650 30.913 482 286 12 25 497 77 520 1.29e-47 173
MS.gene69039.t1 MTR_3g084110 28.515 505 320 14 16 508 13 488 2.48e-47 171
MS.gene69039.t1 MTR_5g096000 48.663 187 73 2 1 187 1 164 7.22e-47 165
MS.gene69039.t1 MTR_5g096000 49.254 134 68 0 377 510 176 309 2.07e-32 126
MS.gene69039.t1 MTR_6g018790 29.512 471 298 11 19 485 98 538 7.87e-47 171
MS.gene69039.t1 MTR_4g077740 29.237 472 286 11 34 485 53 496 1.13e-46 170
MS.gene69039.t1 MTR_3g116240 27.536 483 301 11 28 485 29 487 1.15e-46 170
MS.gene69039.t1 MTR_2g013310 25.934 482 323 10 19 491 46 502 1.88e-46 169
MS.gene69039.t1 MTR_4g069500 24.748 497 333 9 28 504 31 506 3.19e-46 169
MS.gene69039.t1 MTR_5g075300 27.088 491 314 9 21 489 14 482 1.37e-45 167
MS.gene69039.t1 MTR_4g069500 26.392 413 284 6 111 504 45 456 2.10e-45 166
MS.gene69039.t1 MTR_8g077890 28.904 429 281 7 92 498 65 491 2.56e-45 166
MS.gene69039.t1 MTR_7g082270 27.692 455 301 8 32 485 71 498 1.01e-44 164
MS.gene69039.t1 MTR_2g013310 28.462 390 265 8 111 491 45 429 1.06e-44 163
MS.gene69039.t1 MTR_6g087910 29.288 379 251 6 111 485 117 482 2.22e-41 155
MS.gene69039.t1 MTR_4g013205 29.024 379 252 7 111 485 103 468 2.42e-41 155
MS.gene69039.t1 MTR_7g082270 28.715 397 256 7 32 428 71 440 3.99e-41 154
MS.gene69039.t1 MTR_5g077580 26.268 552 280 16 35 492 35 553 2.24e-40 154
MS.gene69039.t1 MTR_1g022315 27.317 410 284 7 86 490 89 489 1.71e-39 150
MS.gene69039.t1 MTR_3g074330 50.000 162 70 3 1 155 1 158 2.65e-39 141
MS.gene69039.t1 MTR_3g074360 50.000 162 70 3 1 155 1 158 2.65e-39 141
MS.gene69039.t1 MTR_2g026160 31.977 344 199 9 25 355 26 347 5.99e-39 150
MS.gene69039.t1 MTR_1g022315 27.068 399 277 7 97 490 1 390 7.34e-39 146
MS.gene69039.t1 MTR_3g074310 49.383 162 71 3 1 155 1 158 1.39e-38 139
MS.gene69039.t1 MTR_8g077310 26.395 466 306 10 26 485 47 481 1.54e-38 147
MS.gene69039.t1 MTR_3g080240 28.535 396 266 10 95 485 144 527 2.55e-38 147
MS.gene69039.t1 MTR_2g048720 31.065 338 204 7 35 365 35 350 9.34e-38 146
MS.gene69039.t1 MTR_8g077310 27.089 395 271 8 97 485 1 384 1.01e-37 143
MS.gene69039.t1 MTR_5g020270 27.494 411 281 8 86 490 90 489 1.01e-37 145
MS.gene69039.t1 MTR_7g113960 29.829 409 257 12 86 485 67 454 3.60e-37 143
MS.gene69039.t1 MTR_5g020270 27.250 400 274 8 97 490 1 389 4.27e-37 141
MS.gene69039.t1 MTR_8g077300 26.439 469 304 11 25 485 38 473 1.42e-36 141
MS.gene69039.t1 MTR_2g049020 28.696 345 218 6 35 371 35 359 1.43e-36 143
MS.gene69039.t1 MTR_1g038620 42.767 159 73 2 206 364 50 190 9.01e-36 132
MS.gene69039.t1 MTR_7g113970 29.710 414 253 12 86 485 102 491 2.09e-35 139
MS.gene69039.t1 MTR_7g094450 26.355 406 277 6 86 485 80 469 2.69e-35 138
MS.gene69039.t1 MTR_5g019870 27.373 453 291 9 81 509 50 488 4.07e-35 137
MS.gene69039.t1 MTR_4g118610 29.412 408 263 10 86 485 92 482 3.51e-33 132
MS.gene69039.t1 MTR_5g020270 26.683 416 257 9 86 490 90 468 1.37e-32 130
MS.gene69039.t1 MTR_7g094110 26.353 425 283 10 67 485 71 471 4.31e-31 126
MS.gene69039.t1 MTR_0064s0040 43.478 138 66 1 18 155 16 141 4.63e-31 118
MS.gene69039.t1 MTR_4g064820 28.455 369 225 9 26 376 96 443 1.78e-29 121
MS.gene69039.t1 MTR_2g020710 27.518 407 270 10 87 485 1 390 3.41e-29 119
MS.gene69039.t1 MTR_2g020710 27.451 408 271 10 86 485 89 479 4.69e-29 120
MS.gene69039.t1 MTR_2g026140 29.129 333 189 10 36 355 34 332 2.32e-28 119
MS.gene69039.t1 MTR_8g077310 28.472 288 193 6 86 370 87 364 1.81e-27 114
MS.gene69039.t1 MTR_4g069500 23.585 318 224 5 205 504 1 317 2.60e-26 109
MS.gene69039.t1 MTR_7g113960 30.935 278 168 9 86 355 67 328 3.34e-26 110
MS.gene69039.t1 MTR_7g094110 25.000 424 270 10 67 485 71 451 1.52e-24 106
MS.gene69039.t1 MTR_3g116060 32.308 195 121 3 77 263 31 222 4.48e-22 100
MS.gene69039.t1 MTR_3g116060 27.686 242 155 6 260 489 484 717 1.88e-12 70.1
MS.gene69039.t1 MTR_7g113970 28.060 335 206 11 86 406 102 415 5.06e-22 99.0
MS.gene69039.t1 MTR_4g118610 28.614 339 217 10 86 416 92 413 1.14e-21 97.8
MS.gene69039.t1 MTR_8g073100 27.966 236 157 4 79 306 39 269 8.00e-21 96.7
MS.gene69039.t1 MTR_8g073100 28.444 225 141 6 278 489 488 705 6.96e-11 65.1
MS.gene69039.t1 MTR_5g024740 28.033 239 151 4 26 262 4 223 1.74e-20 95.5
MS.gene69039.t1 MTR_5g044910 30.508 177 122 1 87 262 47 223 4.75e-20 94.4
MS.gene69039.t1 MTR_2g020710 26.113 337 226 9 86 415 89 409 2.33e-19 90.9
MS.gene69039.t1 MTR_2g020710 26.549 339 224 10 86 416 89 410 2.38e-19 90.9
MS.gene69039.t1 MTR_1g114280 35.065 154 79 3 350 501 21 155 2.44e-19 85.5
MS.gene69039.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 4.35e-19 91.3
MS.gene69039.t1 MTR_2g020710 28.571 273 174 8 86 351 89 347 6.13e-19 89.0
MS.gene69039.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 9.08e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69039.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene69039.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene69039.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene69039.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene69039.t1 AT5G26340 56.693 508 212 6 1 504 1 504 0.0 567
MS.gene69039.t1 AT3G19940 51.389 504 241 3 1 502 1 502 0.0 537
MS.gene69039.t1 AT1G50310 51.485 505 240 4 1 502 1 503 0.0 526
MS.gene69039.t1 AT1G11260 52.827 513 234 5 1 509 1 509 0.0 525
MS.gene69039.t1 AT1G77210 69.143 350 108 0 155 504 6 355 0.0 516
MS.gene69039.t1 AT5G23270 53.507 499 225 6 1 495 1 496 1.09e-178 512
MS.gene69039.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.22e-177 509
MS.gene69039.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.22e-177 509
MS.gene69039.t1 AT4G21480 53.909 486 219 4 18 500 15 498 1.74e-174 501
MS.gene69039.t1 AT5G26250 48.875 489 245 4 18 504 14 499 1.17e-164 476
MS.gene69039.t1 AT3G05960 47.284 497 259 3 14 509 9 503 4.94e-163 472
MS.gene69039.t1 AT5G61520 46.217 489 255 4 21 503 19 505 6.64e-156 454
MS.gene69039.t1 AT1G34580 44.618 511 269 8 1 503 1 505 2.17e-148 434
MS.gene69039.t1 AT1G07340 46.201 487 256 6 18 501 15 498 2.50e-147 432
MS.gene69039.t1 AT5G61520 45.415 458 242 4 52 503 2 457 1.37e-140 413
MS.gene69039.t1 AT1G34580 44.444 459 243 7 53 503 1 455 3.92e-133 394
MS.gene69039.t1 AT1G50310 49.858 351 172 3 155 502 11 360 8.39e-121 359
MS.gene69039.t1 AT2G16130 29.569 487 300 9 28 492 27 492 4.46e-57 198
MS.gene69039.t1 AT2G16120 28.953 487 303 9 28 492 27 492 8.83e-56 195
MS.gene69039.t1 AT4G36670 29.839 496 300 11 30 503 21 490 3.54e-54 190
MS.gene69039.t1 AT2G18480 30.998 471 281 12 40 489 36 483 5.19e-54 190
MS.gene69039.t1 AT3G18830 27.833 503 319 12 28 509 37 516 6.10e-54 190
MS.gene69039.t1 AT5G59250 29.586 507 307 14 3 485 72 552 3.88e-46 169
MS.gene69039.t1 AT4G16480 28.376 585 295 19 23 510 24 581 5.70e-46 169
MS.gene69039.t1 AT4G16480 28.376 585 295 19 23 510 24 581 5.70e-46 169
MS.gene69039.t1 AT4G16480 28.376 585 295 19 23 510 24 581 5.70e-46 169
MS.gene69039.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.34e-45 167
MS.gene69039.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.34e-45 167
MS.gene69039.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.34e-45 167
MS.gene69039.t1 AT5G16150 28.330 473 305 9 19 487 98 540 1.01e-44 165
MS.gene69039.t1 AT5G16150 28.330 473 305 9 19 487 98 540 1.01e-44 165
MS.gene69039.t1 AT5G16150 28.330 473 305 9 19 487 98 540 1.01e-44 165
MS.gene69039.t1 AT2G20780 27.912 498 315 16 13 497 42 508 9.08e-44 162
MS.gene69039.t1 AT2G43330 29.289 478 303 10 25 492 30 482 1.82e-43 161
MS.gene69039.t1 AT2G20780 30.238 420 269 14 91 497 42 450 1.24e-41 155
MS.gene69039.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.51e-41 155
MS.gene69039.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.51e-41 155
MS.gene69039.t1 AT3G03090 28.138 494 307 10 12 485 33 498 4.29e-41 154
MS.gene69039.t1 AT1G05030 30.340 412 269 11 82 487 64 463 1.92e-40 152
MS.gene69039.t1 AT1G05030 29.004 462 291 13 32 487 85 515 2.14e-40 153
MS.gene69039.t1 AT1G75220 28.117 409 281 6 86 490 88 487 3.53e-40 152
MS.gene69039.t1 AT2G48020 28.710 411 261 8 86 485 68 457 1.44e-39 149
MS.gene69039.t1 AT2G48020 28.710 411 261 8 86 485 68 457 1.44e-39 149
MS.gene69039.t1 AT1G19450 28.606 409 279 6 86 490 89 488 1.73e-39 150
MS.gene69039.t1 AT1G08900 28.642 405 269 8 86 485 23 412 1.45e-38 146
MS.gene69039.t1 AT3G05400 28.979 421 259 13 86 491 66 461 1.60e-38 147
MS.gene69039.t1 AT1G08900 28.642 405 269 8 86 485 57 446 2.96e-38 145
MS.gene69039.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.57e-38 145
MS.gene69039.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.57e-38 145
MS.gene69039.t1 AT1G67300 27.559 381 258 7 111 485 118 486 1.53e-37 144
MS.gene69039.t1 AT5G27360 28.364 483 284 13 19 485 28 464 3.18e-37 143
MS.gene69039.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.69e-37 142
MS.gene69039.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.69e-37 142
MS.gene69039.t1 AT1G30220 29.775 356 223 9 7 355 10 345 6.02e-37 144
MS.gene69039.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.54e-37 142
MS.gene69039.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.54e-37 142
MS.gene69039.t1 AT5G27360 28.364 483 284 13 19 485 76 512 7.68e-37 143
MS.gene69039.t1 AT5G27350 27.551 490 279 12 19 485 24 460 9.90e-37 142
MS.gene69039.t1 AT3G05400 30.750 400 227 15 117 491 67 441 1.09e-36 141
MS.gene69039.t1 AT3G05155 26.650 409 270 9 86 485 67 454 1.26e-36 141
MS.gene69039.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.77e-36 141
MS.gene69039.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.77e-36 141
MS.gene69039.t1 AT4G04760 30.184 434 270 10 68 492 2 411 1.80e-36 140
MS.gene69039.t1 AT1G54730 27.475 404 275 8 86 485 72 461 1.84e-36 141
MS.gene69039.t1 AT4G04750 29.016 386 258 8 111 492 145 518 3.92e-36 141
MS.gene69039.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.44e-36 140
MS.gene69039.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.44e-36 140
MS.gene69039.t1 AT3G05150 28.256 407 269 8 86 485 75 465 6.54e-36 140
MS.gene69039.t1 AT4G04760 30.184 434 270 10 68 492 61 470 6.94e-36 139
MS.gene69039.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.62e-36 139
MS.gene69039.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.62e-36 139
MS.gene69039.t1 AT1G08890 28.993 407 265 10 86 485 67 456 1.46e-35 138
MS.gene69039.t1 AT1G67300 27.586 319 219 5 111 427 118 426 1.92e-35 137
MS.gene69039.t1 AT1G67300 27.586 319 219 5 111 427 118 426 1.92e-35 137
MS.gene69039.t1 AT5G18840 29.657 408 262 10 86 485 84 474 4.04e-35 137
MS.gene69039.t1 AT1G79820 26.769 325 228 4 111 435 121 435 4.06e-35 137
MS.gene69039.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.22e-35 135
MS.gene69039.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.22e-35 135
MS.gene69039.t1 AT2G35740 27.763 371 227 9 25 381 25 368 5.30e-35 138
MS.gene69039.t1 AT3G05160 28.780 410 258 12 88 485 14 401 3.96e-34 133
MS.gene69039.t1 AT3G05160 28.780 410 258 12 88 485 14 401 3.96e-34 133
MS.gene69039.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.08e-34 134
MS.gene69039.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.08e-34 134
MS.gene69039.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.08e-34 134
MS.gene69039.t1 AT3G05160 28.780 410 258 12 88 485 63 450 7.72e-34 133
MS.gene69039.t1 AT1G08900 29.444 360 234 8 86 440 65 409 1.59e-32 129
MS.gene69039.t1 AT1G08920 26.214 412 270 10 86 485 72 461 1.91e-32 129
MS.gene69039.t1 AT4G04760 29.561 433 269 11 68 491 61 466 3.59e-32 129
MS.gene69039.t1 AT1G54730 26.667 360 246 8 86 441 72 417 1.73e-31 126
MS.gene69039.t1 AT1G08920 25.776 419 270 10 86 485 72 468 2.30e-31 127
MS.gene69039.t1 AT1G54730 25.743 404 261 8 86 485 72 440 1.45e-29 121
MS.gene69039.t1 AT3G20460 27.670 412 264 11 86 485 93 482 1.53e-28 119
MS.gene69039.t1 AT3G05165 29.552 335 194 12 111 429 95 403 3.02e-28 118
MS.gene69039.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.36e-28 117
MS.gene69039.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.36e-28 117
MS.gene69039.t1 AT1G08920 25.815 368 239 10 86 441 72 417 1.54e-27 115
MS.gene69039.t1 AT2G48020 29.066 289 184 6 86 367 68 342 1.13e-26 112
MS.gene69039.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.16e-25 109
MS.gene69039.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.56e-25 109
MS.gene69039.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.76e-25 107
MS.gene69039.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.76e-25 107
MS.gene69039.t1 AT3G51490 35.057 174 111 2 91 263 2 174 4.86e-25 109
MS.gene69039.t1 AT1G54730 24.722 360 232 8 86 441 72 396 1.10e-24 106
MS.gene69039.t1 AT2G48020 29.286 280 170 6 86 355 68 329 1.88e-24 105
MS.gene69039.t1 AT3G05155 26.619 278 177 7 86 355 67 325 1.95e-24 104
MS.gene69039.t1 AT1G79820 24.468 376 225 5 111 485 121 438 3.63e-24 105
MS.gene69039.t1 AT5G27360 26.905 420 245 13 19 422 28 401 9.70e-24 103
MS.gene69039.t1 AT1G54730 26.374 273 187 5 86 355 72 333 9.84e-24 102
MS.gene69039.t1 AT5G17010 24.540 489 271 13 12 485 30 435 4.47e-22 99.4
MS.gene69039.t1 AT1G79820 24.862 362 209 6 127 485 75 376 2.26e-21 96.3
MS.gene69039.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.44e-21 95.1
MS.gene69039.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.44e-21 95.1
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.39e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.15e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.15e-21 96.7
MS.gene69039.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.15e-21 96.7
MS.gene69039.t1 AT1G54730 25.498 251 176 4 86 333 72 314 2.26e-20 93.6
MS.gene69039.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.19e-19 90.9
MS.gene69039.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.19e-19 90.9

Find 102 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAACTTGCTTGGTTTC+TGG 0.107517 6.2:+86389190 None:intergenic
ACGAGACTGTTTGGTGTTTC+TGG 0.129924 6.2:+86390362 None:intergenic
TTCCTAAACATGTTGTTAAT+TGG 0.179284 6.2:+86390504 None:intergenic
GGATATGATCTTGGTGTTTC+AGG 0.205684 6.2:-86391931 MS.gene69039:intron
GCACTTGGTGGGGCTCTATT+TGG 0.217992 6.2:-86391952 MS.gene69039:CDS
AAATTCAGCATCAACATTTC+TGG 0.244849 6.2:+86390286 None:intergenic
CTTGGAGTTGGTATTGGATT+TGG 0.262672 6.2:-86390937 MS.gene69039:CDS
AGTTGCTATCTTTCTAGTTT+TGG 0.264121 6.2:-86389458 MS.gene69039:CDS
ATCATTGGACGTATTCTTCT+TGG 0.273716 6.2:-86390955 MS.gene69039:CDS
ATTGCTAACCTTGTGAATTA+TGG 0.277757 6.2:-86390476 MS.gene69039:CDS
GATCAGCATTGCTATATTCT+TGG 0.280820 6.2:+86390975 None:intergenic
GGAAGATCTTGGGGTCCCTT+AGG 0.306086 6.2:-86389409 MS.gene69039:CDS
CCAATTGTTTGGAAAATAAC+AGG 0.316014 6.2:+86390107 None:intergenic
GATTGCCACTGCTATAGTTT+TGG 0.321689 6.2:-86389518 MS.gene69039:CDS
GCTGCTCTTGTGTCCACATT+TGG 0.331542 6.2:-86391090 MS.gene69039:CDS
ATCTTCTGTTTGAGAATCAT+TGG 0.334480 6.2:-86389156 MS.gene69039:CDS
TGTTTGAGAATCATTGGTTT+TGG 0.335335 6.2:-86389150 MS.gene69039:CDS
TTTGGCTTATGGAAGATCTT+GGG 0.336326 6.2:-86389419 MS.gene69039:CDS
TACACTCATCTCAATGGCTT+TGG 0.339050 6.2:-86390024 MS.gene69039:CDS
GCTCTATTTGGATATGATCT+TGG 0.350131 6.2:-86391940 MS.gene69039:CDS
CTTTATGAGCATAAGATAAC+TGG 0.354982 6.2:-86392003 MS.gene69039:CDS
GCAGATGACCTTATCTCTAA+TGG 0.355097 6.2:+86389361 None:intergenic
TTCCAATTAACAACATGTTT+AGG 0.355215 6.2:-86390506 MS.gene69039:CDS
CCAGCATTTCAACAACTAAC+TGG 0.358134 6.2:-86390155 MS.gene69039:CDS
GAAGATCTTGGGGTCCCTTA+GGG 0.359127 6.2:-86389408 MS.gene69039:CDS
TGCTTCCTCTCATACACATT+GGG 0.365544 6.2:+86391189 None:intergenic
CAGAGCCAAATCCAATTGTT+TGG 0.371830 6.2:+86390096 None:intergenic
TTGGGGTCCCTTAGGGTGGT+TGG 0.373657 6.2:-86389401 MS.gene69039:CDS
ATTCTTCTTGGAGTTGGTAT+TGG 0.373658 6.2:-86390943 MS.gene69039:CDS
CTCAAAAGAAGATTCTGAAA+TGG 0.375386 6.2:+86390218 None:intergenic
CCTTGTTCAACGAGACTGTT+TGG 0.377508 6.2:+86390353 None:intergenic
TCCTCTATATCTTTCAGAAA+TGG 0.385342 6.2:-86390564 MS.gene69039:CDS
CTCTTCAATTGGAACTTGCT+TGG 0.389604 6.2:+86389183 None:intergenic
TACTGAGAAAATTCATCCTT+GGG 0.394596 6.2:-86390453 MS.gene69039:CDS
CAAACAATTGGATTTGGCTC+TGG 0.401668 6.2:-86390095 MS.gene69039:CDS
GATGGAAAGCAACTGTCATT+TGG 0.401901 6.2:-86389481 MS.gene69039:CDS
GCATTATTGGAGCACTTGGT+GGG 0.409674 6.2:-86391963 MS.gene69039:CDS
CCGATGAACATGAATGTTGC+TGG 0.411631 6.2:+86390398 None:intergenic
TGCATTATTGGAGCACTTGG+TGG 0.411658 6.2:-86391964 MS.gene69039:CDS
AGAAGATAAATCTCTTCAAT+TGG 0.412850 6.2:+86389172 None:intergenic
AGTAGACAAAGCAGCTCATA+AGG 0.415528 6.2:+86389221 None:intergenic
GTAGTGTTGGAAAAGATTAG+AGG 0.423770 6.2:-86390311 MS.gene69039:CDS
AATATAGCAATGCTGATCAT+TGG 0.436846 6.2:-86390970 MS.gene69039:CDS
CCAGTTAGTTGTTGAAATGC+TGG 0.437664 6.2:+86390155 None:intergenic
AACTCTTTCCATTAGAGATA+AGG 0.443050 6.2:-86389369 MS.gene69039:CDS
GCAAGAAGATTCCGTATTTG+AGG 0.449476 6.2:+86389263 None:intergenic
GGACGTATTCTTCTTGGAGT+TGG 0.452238 6.2:-86390949 MS.gene69039:CDS
ATGGCTTTGGTTGACAAGTT+CGG 0.453120 6.2:-86390011 MS.gene69039:CDS
AGGAGAGCTAGTATCTTAGT+TGG 0.456742 6.2:-86391039 MS.gene69039:CDS
GTACTGAGAAAATTCATCCT+TGG 0.465348 6.2:-86390454 MS.gene69039:CDS
TCTTGCATTATTGGAGCACT+TGG 0.467413 6.2:-86391967 MS.gene69039:CDS
GCCATTTCTGAAAGATATAG+AGG 0.470895 6.2:+86390563 None:intergenic
AATAGACCTCAATTCATCAT+TGG 0.473706 6.2:-86390191 MS.gene69039:CDS
CTACTCTTCCTTCATCGATT+CGG 0.476748 6.2:+86390330 None:intergenic
TGGGGATGGAGGTTATCTCT+AGG 0.477162 6.2:-86390434 MS.gene69039:CDS
TCTTGCTACACTCATCTCAA+TGG 0.483416 6.2:-86390030 MS.gene69039:CDS
TCACTTTGCCACCTCAAATA+CGG 0.498322 6.2:-86389274 MS.gene69039:CDS
ATAAAGATGAGCCCTCTTGA+GGG 0.508927 6.2:+86392020 None:intergenic
GATCTTGGGGTCCCTTAGGG+TGG 0.511703 6.2:-86389405 MS.gene69039:CDS
TTGGCTTATGGAAGATCTTG+GGG 0.511716 6.2:-86389418 MS.gene69039:CDS
GAACAAGGCCGAATCGATGA+AGG 0.514991 6.2:-86390338 MS.gene69039:CDS
TGAATTTGATGATCTTATTG+AGG 0.516440 6.2:-86390270 MS.gene69039:CDS
CATTATTGGAGCACTTGGTG+GGG 0.519682 6.2:-86391962 MS.gene69039:CDS
CGATGAAGGAAGAGTAGTGT+TGG 0.519853 6.2:-86390324 MS.gene69039:CDS
CGCAGGTGGTGTTACTTCCA+TGG 0.522231 6.2:-86391235 MS.gene69039:intron
ATGTTGTTAATTGGAAGAGT+TGG 0.525900 6.2:+86390513 None:intergenic
AGAAAATTCATCCTTGGGGA+TGG 0.536487 6.2:-86390448 MS.gene69039:CDS
ATGCTTCCTCTCATACACAT+TGG 0.537050 6.2:+86391188 None:intergenic
TTTAGCTTATGCTTGTGTCT+CGG 0.537950 6.2:+86389096 None:intergenic
CCAGCAACATTCATGTTCAT+CGG 0.541413 6.2:-86390398 MS.gene69039:CDS
CATAAAGATGAGCCCTCTTG+AGG 0.543236 6.2:+86392019 None:intergenic
ACTAGGAACCAACCACCCTA+AGG 0.558058 6.2:+86389393 None:intergenic
AAAAGTTAGGGGAAAATGGC+AGG 0.558336 6.2:-86392066 None:intergenic
CTTGCTTGGTTTCTGGCAAG+AGG 0.560907 6.2:+86389197 None:intergenic
TCTAATGGAAAGAGTTCACT+AGG 0.569504 6.2:+86389376 None:intergenic
TAGACTTGAAGCACCAAATG+TGG 0.573480 6.2:+86391077 None:intergenic
CCAAACAGTCTCGTTGAACA+AGG 0.574070 6.2:-86390353 MS.gene69039:CDS
TTCTACGAGGAAATCATCCA+TGG 0.578109 6.2:+86391218 None:intergenic
CTTTGGTTGACAAGTTCGGT+AGG 0.581993 6.2:-86390007 MS.gene69039:CDS
TATTGTCAAAGACGAAAACA+AGG 0.585983 6.2:-86389122 MS.gene69039:CDS
ATTGCACCAATGATGAATTG+AGG 0.586290 6.2:+86390185 None:intergenic
AAATTCATCCTTGGGGATGG+AGG 0.588295 6.2:-86390445 MS.gene69039:CDS
CTAGGAACCAACCACCCTAA+GGG 0.605522 6.2:+86389394 None:intergenic
TCTTCCCCAATGTGTATGAG+AGG 0.608557 6.2:-86391194 MS.gene69039:CDS
AGAAGATTCCGTATTTGAGG+TGG 0.620303 6.2:+86389266 None:intergenic
AAGGAAGAATTGTGCGACGA+TGG 0.620883 6.2:+86389300 None:intergenic
GCAGGTGGAGCATTTGCAGA+TGG 0.625709 6.2:-86392048 MS.gene69039:CDS
TCTCAGTACCATAATTCACA+AGG 0.628815 6.2:+86390468 None:intergenic
CAGATGGTAGCACCCTCAAG+AGG 0.631499 6.2:-86392032 MS.gene69039:CDS
TACTGAAATGATAATATGCA+TGG 0.645085 6.2:-86389961 MS.gene69039:intron
AGAGATAACCTCCATCCCCA+AGG 0.646035 6.2:+86390437 None:intergenic
AGTAGCCAAAACTATAGCAG+TGG 0.662275 6.2:+86389513 None:intergenic
AGATGGTAGCACCCTCAAGA+GGG 0.662568 6.2:-86392031 MS.gene69039:CDS
TTGTCAAAGACGAAAACAAG+GGG 0.669786 6.2:-86389120 MS.gene69039:CDS
GTCATCTGCACAAAGTGTTG+TGG 0.672138 6.2:-86389347 MS.gene69039:CDS
GCTTCCTCTCATACACATTG+GGG 0.674331 6.2:+86391190 None:intergenic
GCAACATTCATGTTCATCGG+AGG 0.680039 6.2:-86390395 MS.gene69039:CDS
ACTGAGAAAATTCATCCTTG+GGG 0.680112 6.2:-86390452 MS.gene69039:CDS
ATTGTCAAAGACGAAAACAA+GGG 0.682689 6.2:-86389121 MS.gene69039:CDS
AGTTAGGGGAAAATGGCAGG+TGG 0.686132 6.2:-86392063 None:intergenic
TGAGGTGGCAAAGTGACACA+AGG 0.706842 6.2:+86389281 None:intergenic
CATTGGGGAAGAATTCTACG+AGG 0.762740 6.2:+86391205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTAGTATAAAAATTTAATA+TGG - chr6.2:86390403-86390422 MS.gene69039:CDS 10.0%
!!! TTGGTTTATTTTTTATAATA+AGG + chr6.2:86389272-86389291 None:intergenic 10.0%
!!! AAATCAAGTAAGTTTAATTT+TGG - chr6.2:86390239-86390258 MS.gene69039:CDS 15.0%
!!! CATGATTTTTCTAATTATTA+TGG - chr6.2:86390556-86390575 MS.gene69039:CDS 15.0%
!!! TTTGAAAATCACATATTTTT+TGG - chr6.2:86389737-86389756 MS.gene69039:intron 15.0%
!! TTGTGCATAATCATATATAA+AGG + chr6.2:86389384-86389403 None:intergenic 20.0%
!!! ATTTTGATTTTGCCATTTAT+AGG - chr6.2:86389297-86389316 MS.gene69039:CDS 20.0%
!!! CAAAATTATGTTTCTACATT+TGG - chr6.2:86391373-86391392 MS.gene69039:intron 20.0%
!!! CAAATGTAGAAACATAATTT+TGG + chr6.2:86391375-86391394 None:intergenic 20.0%
!!! TTTGCCATTTATAAAGAATA+GGG - chr6.2:86389595-86389614 MS.gene69039:intron 20.0%
!!! TTTTGCCATTTATAAAGAAT+AGG - chr6.2:86389594-86389613 MS.gene69039:intron 20.0%
! AAGAATACTAGATGTTTGTA+TGG - chr6.2:86391467-86391486 MS.gene69039:intron 25.0%
! AGAAGATAAATCTCTTCAAT+TGG + chr6.2:86391984-86392003 None:intergenic 25.0%
! ATGTACATATTCATCAATGA+AGG + chr6.2:86389657-86389676 None:intergenic 25.0%
! ATTAACCACTCAATTTCTAA+AGG - chr6.2:86389761-86389780 MS.gene69039:intron 25.0%
! GATTCCCTATTCTTTATAAA+TGG + chr6.2:86389602-86389621 None:intergenic 25.0%
! GGAGTTTAATAACTATTGTT+GGG - chr6.2:86390260-86390279 MS.gene69039:CDS 25.0%
! GGCAAAATCAAAATTTGTAT+TGG + chr6.2:86389291-86389310 None:intergenic 25.0%
! TACTGAAATGATAATATGCA+TGG - chr6.2:86391192-86391211 MS.gene69039:CDS 25.0%
! TCAAGTCTAACAAAAAACAA+AGG - chr6.2:86390090-86390109 MS.gene69039:CDS 25.0%
! TGGAGTTTAATAACTATTGT+TGG - chr6.2:86390259-86390278 MS.gene69039:CDS 25.0%
! TGTCCTCAAGATAAAAAATA+TGG - chr6.2:86390512-86390531 MS.gene69039:CDS 25.0%
! TTCCAATTAACAACATGTTT+AGG - chr6.2:86390647-86390666 MS.gene69039:intron 25.0%
! TTCCTAAACATGTTGTTAAT+TGG + chr6.2:86390652-86390671 None:intergenic 25.0%
! TTGTGCAAAAACAATTTGTA+AGG + chr6.2:86390373-86390392 None:intergenic 25.0%
!! ATTTTCCAAACAATTGGATT+TGG - chr6.2:86391052-86391071 MS.gene69039:CDS 25.0%
!! CTCATATTTTCTTGCATTAT+TGG - chr6.2:86389177-86389196 MS.gene69039:CDS 25.0%
!! TAAACTTTTCAGTTTCTCTT+TGG + chr6.2:86389338-86389357 None:intergenic 25.0%
!! TAGAATAGTTCATCTAAAGT+AGG + chr6.2:86391448-86391467 None:intergenic 25.0%
!! TATCTTTTGTTGCTAATTTG+AGG - chr6.2:86391584-86391603 MS.gene69039:intron 25.0%
!! TCTTAATAGATTTTGCTTCT+CGG + chr6.2:86390913-86390932 None:intergenic 25.0%
!! TGAATTTGATGATCTTATTG+AGG - chr6.2:86390883-86390902 MS.gene69039:intron 25.0%
!! TGCATTAATCACAAAGTATT+TGG + chr6.2:86390464-86390483 None:intergenic 25.0%
!! TTTTCTAATTATTATGGTGC+AGG - chr6.2:86390562-86390581 MS.gene69039:CDS 25.0%
!!! GGTGATTTTCTTATTTGTTT+TGG - chr6.2:86391716-86391735 MS.gene69039:intron 25.0%
!!! GTTTCTTAACTTGTTACTTA+AGG - chr6.2:86391395-86391414 MS.gene69039:intron 25.0%
!!! TGACCATATTTTTTATCTTG+AGG + chr6.2:86390518-86390537 None:intergenic 25.0%
!!! TTCTTATTTGTTTTGGCTTA+TGG - chr6.2:86391723-86391742 MS.gene69039:intron 25.0%
AAAACGAAAACTCATGTGTT+TGG + chr6.2:86390434-86390453 None:intergenic 30.0%
AAAGGAAGAAAAACAAGAGT+CGG + chr6.2:86389449-86389468 None:intergenic 30.0%
AAATTCAGCATCAACATTTC+TGG + chr6.2:86390870-86390889 None:intergenic 30.0%
AACGATTATTCCGAAACAAA+GGG - chr6.2:86389873-86389892 MS.gene69039:intron 30.0%
AACTCTTTCCATTAGAGATA+AGG - chr6.2:86391784-86391803 MS.gene69039:intron 30.0%
AATAGACCTCAATTCATCAT+TGG - chr6.2:86390962-86390981 MS.gene69039:CDS 30.0%
AATATAGCAATGCTGATCAT+TGG - chr6.2:86390183-86390202 MS.gene69039:CDS 30.0%
ACTACCTAAAATTTCCCTAA+GGG + chr6.2:86389715-86389734 None:intergenic 30.0%
ATAAACTCTTGAAGACTGTT+TGG - chr6.2:86391514-86391533 MS.gene69039:intron 30.0%
ATCTTCTGTTTGAGAATCAT+TGG - chr6.2:86391997-86392016 MS.gene69039:CDS 30.0%
ATGTTGTTAATTGGAAGAGT+TGG + chr6.2:86390643-86390662 None:intergenic 30.0%
ATTGCTAACCTTGTGAATTA+TGG - chr6.2:86390677-86390696 MS.gene69039:intron 30.0%
ATTGTCAAAGACGAAAACAA+GGG - chr6.2:86392032-86392051 MS.gene69039:CDS 30.0%
CCAATTGTTTGGAAAATAAC+AGG + chr6.2:86391049-86391068 None:intergenic 30.0%
CTTTATGAGCATAAGATAAC+TGG - chr6.2:86389150-86389169 MS.gene69039:CDS 30.0%
GTCTAACAAAAAACAAAGGA+AGG - chr6.2:86390094-86390113 MS.gene69039:CDS 30.0%
TACTACCTAAAATTTCCCTA+AGG + chr6.2:86389716-86389735 None:intergenic 30.0%
TACTGAGAAAATTCATCCTT+GGG - chr6.2:86390700-86390719 MS.gene69039:intron 30.0%
TATTGTCAAAGACGAAAACA+AGG - chr6.2:86392031-86392050 MS.gene69039:CDS 30.0%
TCCTCTATATCTTTCAGAAA+TGG - chr6.2:86390589-86390608 MS.gene69039:intron 30.0%
TCTCAGATTGAATAGAGATA+AGG - chr6.2:86390313-86390332 MS.gene69039:CDS 30.0%
TTTATCTTGAGGACATGTTA+AGG + chr6.2:86390507-86390526 None:intergenic 30.0%
! CTCAAAAGAAGATTCTGAAA+TGG + chr6.2:86390938-86390957 None:intergenic 30.0%
! TACTTTCATACCCTTTGTTT+CGG + chr6.2:86389886-86389905 None:intergenic 30.0%
! TAGTATTTTCAACTCTCACA+AGG - chr6.2:86389497-86389516 MS.gene69039:CDS 30.0%
!! ATTTTGCCATTTATAGGAGT+AGG - chr6.2:86389303-86389322 MS.gene69039:CDS 30.0%
!! CTCTATTCAATCTGAGATTT+TGG + chr6.2:86390310-86390329 None:intergenic 30.0%
!! TGTTTTTGCACAAATGAGTT+AGG - chr6.2:86390380-86390399 MS.gene69039:CDS 30.0%
!! TTGTATTGGTTTATCATCCA+TGG + chr6.2:86389567-86389586 None:intergenic 30.0%
!! TTTTGCCATTTATAGGAGTA+GGG - chr6.2:86389304-86389323 MS.gene69039:CDS 30.0%
!!! AATTTGAGGATTTTTTGTGG+TGG - chr6.2:86391598-86391617 MS.gene69039:intron 30.0%
!!! AGTTGCTATCTTTCTAGTTT+TGG - chr6.2:86391695-86391714 MS.gene69039:intron 30.0%
!!! ATAGTTTTGGCTACTTGTTT+TGG - chr6.2:86391648-86391667 MS.gene69039:intron 30.0%
!!! CAACAAAGGATTGTTTTAGT+CGG - chr6.2:86389828-86389847 MS.gene69039:intron 30.0%
!!! CCTGTTATTTTCCAAACAAT+TGG - chr6.2:86391046-86391065 MS.gene69039:CDS 30.0%
!!! GCTAATTTGAGGATTTTTTG+TGG - chr6.2:86391595-86391614 MS.gene69039:intron 30.0%
!!! TGTTTGAGAATCATTGGTTT+TGG - chr6.2:86392003-86392022 MS.gene69039:CDS 30.0%
AAGGAAGAAAAACAAGAGTC+GGG + chr6.2:86389448-86389467 None:intergenic 35.0%
ACTACCTTAAATCTGCCTAA+GGG + chr6.2:86389481-86389500 None:intergenic 35.0%
ACTGAGAAAATTCATCCTTG+GGG - chr6.2:86390701-86390720 MS.gene69039:intron 35.0%
AGGGATAAAAAGTCCAACAA+AGG - chr6.2:86389814-86389833 MS.gene69039:intron 35.0%
ATCATTGGACGTATTCTTCT+TGG - chr6.2:86390198-86390217 MS.gene69039:CDS 35.0%
ATTGCACCAATGATGAATTG+AGG + chr6.2:86390971-86390990 None:intergenic 35.0%
CGACTAAAACAATCCTTTGT+TGG + chr6.2:86389830-86389849 None:intergenic 35.0%
CTACCTAAAATTTCCCTAAG+GGG + chr6.2:86389714-86389733 None:intergenic 35.0%
GAACGATTATTCCGAAACAA+AGG - chr6.2:86389872-86389891 MS.gene69039:intron 35.0%
GATCAGCATTGCTATATTCT+TGG + chr6.2:86390181-86390200 None:intergenic 35.0%
GCTCTATTTGGATATGATCT+TGG - chr6.2:86389213-86389232 MS.gene69039:CDS 35.0%
GTACTGAGAAAATTCATCCT+TGG - chr6.2:86390699-86390718 MS.gene69039:intron 35.0%
TACTACCTTAAATCTGCCTA+AGG + chr6.2:86389482-86389501 None:intergenic 35.0%
TCTAATGGAAAGAGTTCACT+AGG + chr6.2:86391780-86391799 None:intergenic 35.0%
TCTCAGTACCATAATTCACA+AGG + chr6.2:86390688-86390707 None:intergenic 35.0%
TGATTCCCTACTCCTATAAA+TGG + chr6.2:86389312-86389331 None:intergenic 35.0%
TTGTCAAAGACGAAAACAAG+GGG - chr6.2:86392033-86392052 MS.gene69039:CDS 35.0%
! AGTCGGGTTATATTTAGCTT+GGG + chr6.2:86389432-86389451 None:intergenic 35.0%
! ATCACTTGATAATCACATGC+AGG - chr6.2:86389530-86389549 MS.gene69039:intron 35.0%
! GCCATTTCTGAAAGATATAG+AGG + chr6.2:86390593-86390612 None:intergenic 35.0%
! GTAGTGTTGGAAAAGATTAG+AGG - chr6.2:86390842-86390861 MS.gene69039:intron 35.0%
! TTTGGCTTATGGAAGATCTT+GGG - chr6.2:86391734-86391753 MS.gene69039:intron 35.0%
!! ATTCTTAACTTGTGCCCTAA+AGG + chr6.2:86391276-86391295 None:intergenic 35.0%
!! ATTCTTCTTGGAGTTGGTAT+TGG - chr6.2:86390210-86390229 MS.gene69039:CDS 35.0%
!!! TTTTGGCTTATGGAAGATCT+TGG - chr6.2:86391733-86391752 MS.gene69039:intron 35.0%
AGAAAATTCATCCTTGGGGA+TGG - chr6.2:86390705-86390724 MS.gene69039:intron 40.0%
AGAAGATTCCGTATTTGAGG+TGG + chr6.2:86391890-86391909 None:intergenic 40.0%
AGGAGAGCTAGTATCTTAGT+TGG - chr6.2:86390114-86390133 MS.gene69039:CDS 40.0%
AGTAGACAAAGCAGCTCATA+AGG + chr6.2:86391935-86391954 None:intergenic 40.0%
AGTAGCCAAAACTATAGCAG+TGG + chr6.2:86391643-86391662 None:intergenic 40.0%
ATAAAGATGAGCCCTCTTGA+GGG + chr6.2:86389136-86389155 None:intergenic 40.0%
ATGCTTCCTCTCATACACAT+TGG + chr6.2:86389968-86389987 None:intergenic 40.0%
ATGGCACCAGCAAAAATTAG+AGG - chr6.2:86390608-86390627 MS.gene69039:intron 40.0%
CAGAGCCAAATCCAATTGTT+TGG + chr6.2:86391060-86391079 None:intergenic 40.0%
CCAGCAACATTCATGTTCAT+CGG - chr6.2:86390755-86390774 MS.gene69039:intron 40.0%
CCAGCATTTCAACAACTAAC+TGG - chr6.2:86390998-86391017 MS.gene69039:CDS 40.0%
CCAGTTAGTTGTTGAAATGC+TGG + chr6.2:86391001-86391020 None:intergenic 40.0%
GAATCCCTTAGGCAGATTTA+AGG - chr6.2:86389474-86389493 MS.gene69039:CDS 40.0%
GAGTCGGGTTATATTTAGCT+TGG + chr6.2:86389433-86389452 None:intergenic 40.0%
GATGGAAAGCAACTGTCATT+TGG - chr6.2:86391672-86391691 MS.gene69039:intron 40.0%
GCAAGAAGATTCCGTATTTG+AGG + chr6.2:86391893-86391912 None:intergenic 40.0%
GCAGATGACCTTATCTCTAA+TGG + chr6.2:86391795-86391814 None:intergenic 40.0%
TACACTCATCTCAATGGCTT+TGG - chr6.2:86391129-86391148 MS.gene69039:CDS 40.0%
TCACTTTGCCACCTCAAATA+CGG - chr6.2:86391879-86391898 MS.gene69039:intron 40.0%
TCTTGCTACACTCATCTCAA+TGG - chr6.2:86391123-86391142 MS.gene69039:CDS 40.0%
TGACTGGACTCTAGATTATC+AGG + chr6.2:86389795-86389814 None:intergenic 40.0%
TGCTTCCTCTCATACACATT+GGG + chr6.2:86389967-86389986 None:intergenic 40.0%
TTCTACGAGGAAATCATCCA+TGG + chr6.2:86389938-86389957 None:intergenic 40.0%
TTGGCTTATGGAAGATCTTG+GGG - chr6.2:86391735-86391754 MS.gene69039:intron 40.0%
! AAGTATTGCTTGATGATCGC+AGG - chr6.2:86389901-86389920 MS.gene69039:intron 40.0%
! ACTGCTCCTCTAATTTTTGC+TGG + chr6.2:86390617-86390636 None:intergenic 40.0%
! ACTTGATAATCACATGCAGG+TGG - chr6.2:86389533-86389552 MS.gene69039:intron 40.0%
! ATTGGAACTTGCTTGGTTTC+TGG + chr6.2:86391966-86391985 None:intergenic 40.0%
! CAAACAATTGGATTTGGCTC+TGG - chr6.2:86391058-86391077 MS.gene69039:CDS 40.0%
! CTACTCTTCCTTCATCGATT+CGG + chr6.2:86390826-86390845 None:intergenic 40.0%
! CTATTTTCTGCGTGCCTTTA+GGG - chr6.2:86391259-86391278 MS.gene69039:intron 40.0%
! CTCTTCAATTGGAACTTGCT+TGG + chr6.2:86391973-86391992 None:intergenic 40.0%
! GAACCCCTTAGGGAAATTTT+AGG - chr6.2:86389708-86389727 MS.gene69039:intron 40.0%
! GATAATCTAGAGTCCAGTCA+GGG - chr6.2:86389795-86389814 MS.gene69039:intron 40.0%
! GATTGCCACTGCTATAGTTT+TGG - chr6.2:86391635-86391654 MS.gene69039:intron 40.0%
! GCGTTCCTTTAGAAATTGAG+TGG + chr6.2:86389769-86389788 None:intergenic 40.0%
! GGTTCTGTAAGCTTCTTTTG+TGG - chr6.2:86390135-86390154 MS.gene69039:CDS 40.0%
! TAGACTTGAAGCACCAAATG+TGG + chr6.2:86390079-86390098 None:intergenic 40.0%
! TCCTTTCAAGTGAATCCCTT+AGG - chr6.2:86389463-86389482 MS.gene69039:CDS 40.0%
! TCTTGCATTATTGGAGCACT+TGG - chr6.2:86389186-86389205 MS.gene69039:CDS 40.0%
! TGATAATCTAGAGTCCAGTC+AGG - chr6.2:86389794-86389813 MS.gene69039:intron 40.0%
! TTGGACTTTTTATCCCTGAC+TGG + chr6.2:86389811-86389830 None:intergenic 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG - chr6.2:86391169-86391188 MS.gene69039:CDS 40.0%
!! ATGGCTTTGGTTGACAAGTT+CGG - chr6.2:86391142-86391161 MS.gene69039:CDS 40.0%
!! CTTGGAGTTGGTATTGGATT+TGG - chr6.2:86390216-86390235 MS.gene69039:CDS 40.0%
!! GGATATGATCTTGGTGTTTC+AGG - chr6.2:86389222-86389241 MS.gene69039:CDS 40.0%
!!! TTGGCTACTTGTTTTGGAGA+TGG - chr6.2:86391654-86391673 MS.gene69039:intron 40.0%
AAATTCATCCTTGGGGATGG+AGG - chr6.2:86390708-86390727 MS.gene69039:intron 45.0%
AAGGAAGAATTGTGCGACGA+TGG + chr6.2:86391856-86391875 None:intergenic 45.0%
ATTTCCCTAAGGGGTTCATC+TGG + chr6.2:86389705-86389724 None:intergenic 45.0%
CATAAAGATGAGCCCTCTTG+AGG + chr6.2:86389137-86389156 None:intergenic 45.0%
CATTGGGGAAGAATTCTACG+AGG + chr6.2:86389951-86389970 None:intergenic 45.0%
CCAAACAGTCTCGTTGAACA+AGG - chr6.2:86390800-86390819 MS.gene69039:intron 45.0%
CCGATGAACATGAATGTTGC+TGG + chr6.2:86390758-86390777 None:intergenic 45.0%
CCTTGTTCAACGAGACTGTT+TGG + chr6.2:86390803-86390822 None:intergenic 45.0%
CGATGAAGGAAGAGTAGTGT+TGG - chr6.2:86390829-86390848 MS.gene69039:intron 45.0%
CTTTGGTTGACAAGTTCGGT+AGG - chr6.2:86391146-86391165 MS.gene69039:CDS 45.0%
GCAACATTCATGTTCATCGG+AGG - chr6.2:86390758-86390777 MS.gene69039:intron 45.0%
GCCTAAGGGATTCACTTGAA+AGG + chr6.2:86389467-86389486 None:intergenic 45.0%
GCTTCCTCTCATACACATTG+GGG + chr6.2:86389966-86389985 None:intergenic 45.0%
GGACGTATTCTTCTTGGAGT+TGG - chr6.2:86390204-86390223 MS.gene69039:CDS 45.0%
TATCCCAGATGAACCCCTTA+GGG - chr6.2:86389698-86389717 MS.gene69039:intron 45.0%
TCTTCCCCAATGTGTATGAG+AGG - chr6.2:86389959-86389978 MS.gene69039:intron 45.0%
TTATCCCAGATGAACCCCTT+AGG - chr6.2:86389697-86389716 MS.gene69039:intron 45.0%
TTTCCCTAAGGGGTTCATCT+GGG + chr6.2:86389704-86389723 None:intergenic 45.0%
! CATTATTGGAGCACTTGGTG+GGG - chr6.2:86389191-86389210 MS.gene69039:CDS 45.0%
! CGGTAGGAGAGCTTTCTTTT+TGG - chr6.2:86391162-86391181 MS.gene69039:CDS 45.0%
! GCATTATTGGAGCACTTGGT+GGG - chr6.2:86389190-86389209 MS.gene69039:CDS 45.0%
! TATTGCTTGATGATCGCAGG+TGG - chr6.2:86389904-86389923 MS.gene69039:intron 45.0%
! TGCATTATTGGAGCACTTGG+TGG - chr6.2:86389189-86389208 MS.gene69039:CDS 45.0%
!! ACGAGACTGTTTGGTGTTTC+TGG + chr6.2:86390794-86390813 None:intergenic 45.0%
!! GCTATTTTCTGCGTGCCTTT+AGG - chr6.2:86391258-86391277 MS.gene69039:intron 45.0%
!! GTCATCTGCACAAAGTGTTG+TGG - chr6.2:86391806-86391825 MS.gene69039:intron 45.0%
ACTAGGAACCAACCACCCTA+AGG + chr6.2:86391763-86391782 None:intergenic 50.0%
AGAGATAACCTCCATCCCCA+AGG + chr6.2:86390719-86390738 None:intergenic 50.0%
AGATGGTAGCACCCTCAAGA+GGG - chr6.2:86389122-86389141 MS.gene69039:CDS 50.0%
CTAGGAACCAACCACCCTAA+GGG + chr6.2:86391762-86391781 None:intergenic 50.0%
GAACAAGGCCGAATCGATGA+AGG - chr6.2:86390815-86390834 MS.gene69039:intron 50.0%
GAAGATCTTGGGGTCCCTTA+GGG - chr6.2:86391745-86391764 MS.gene69039:intron 50.0%
GCTGCTCTTGTGTCCACATT+TGG - chr6.2:86390063-86390082 MS.gene69039:CDS 50.0%
TGAGGTGGCAAAGTGACACA+AGG + chr6.2:86391875-86391894 None:intergenic 50.0%
TGGGGATGGAGGTTATCTCT+AGG - chr6.2:86390719-86390738 MS.gene69039:intron 50.0%
!! CTTGCTTGGTTTCTGGCAAG+AGG + chr6.2:86391959-86391978 None:intergenic 50.0%
!! TGCAGGTGGTGTTACTTCCA+TGG - chr6.2:86389547-86389566 MS.gene69039:intron 50.0%
CAGATGGTAGCACCCTCAAG+AGG - chr6.2:86389121-86389140 MS.gene69039:CDS 55.0%
GGAAGATCTTGGGGTCCCTT+AGG - chr6.2:86391744-86391763 MS.gene69039:intron 55.0%
! GCACTTGGTGGGGCTCTATT+TGG - chr6.2:86389201-86389220 MS.gene69039:CDS 55.0%
! GCAGGTGGAGCATTTGCAGA+TGG - chr6.2:86389105-86389124 MS.gene69039:CDS 55.0%
!! CGCAGGTGGTGTTACTTCCA+TGG - chr6.2:86389918-86389937 MS.gene69039:intron 55.0%
GATCTTGGGGTCCCTTAGGG+TGG - chr6.2:86391748-86391767 MS.gene69039:intron 60.0%
TTGGGGTCCCTTAGGGTGGT+TGG - chr6.2:86391752-86391771 MS.gene69039:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 86389102 86392073 86389102 ID=MS.gene69039
chr6.2 mRNA 86389102 86392073 86389102 ID=MS.gene69039.t1;Parent=MS.gene69039
chr6.2 exon 86391932 86392073 86391932 ID=MS.gene69039.t1.exon1;Parent=MS.gene69039.t1
chr6.2 CDS 86391932 86392073 86391932 ID=cds.MS.gene69039.t1;Parent=MS.gene69039.t1
chr6.2 exon 86390930 86391252 86390930 ID=MS.gene69039.t1.exon2;Parent=MS.gene69039.t1
chr6.2 CDS 86390930 86391252 86390930 ID=cds.MS.gene69039.t1;Parent=MS.gene69039.t1
chr6.2 exon 86389962 86390591 86389962 ID=MS.gene69039.t1.exon3;Parent=MS.gene69039.t1
chr6.2 CDS 86389962 86390591 86389962 ID=cds.MS.gene69039.t1;Parent=MS.gene69039.t1
chr6.2 exon 86389102 86389539 86389102 ID=MS.gene69039.t1.exon4;Parent=MS.gene69039.t1
chr6.2 CDS 86389102 86389539 86389102 ID=cds.MS.gene69039.t1;Parent=MS.gene69039.t1
Gene Sequence

>MS.gene69039

ATGGCAGGTGGAGCATTTGCAGATGGTAGCACCCTCAAGAGGGCTCATCTTTATGAGCATAAGATAACTGGATATCTCATATTTTCTTGCATTATTGGAGCACTTGGTGGGGCTCTATTTGGATATGATCTTGGTGTTTCAGGTGAGTTCAACTTAATTGTAAATATCCTTATTATAAAAAATAAACCAATACAAATTTTGATTTTGCCATTTATAGGAGTAGGGAATCATTTCCAAAGAGAAACTGAAAAGTTTAATATACATGTGTAAGTTTAATAACCTTTATATATGATTATGCACAATATTATACATGTGTACGTATTTAATCCCAAGCTAAATATAACCCGACTCTTGTTTTTCTTCCTTTCAAGTGAATCCCTTAGGCAGATTTAAGGTAGTATTTTCAACTCTCACAAGGATATGAAAGTATCACTTGATAATCACATGCAGGTGGTGTTACTTCCATGGATGATAAACCAATACAAATTTTGATTTTGCCATTTATAAAGAATAGGGAATCATTTTCAAAGAGAAATTGAAAAGTTTATATAACCTTCATTGATGAATATGTACATATTATACATGTATACGTATTTTATCCCAGATGAACCCCTTAGGGAAATTTTAGGTAGTAATTTGAAAATCACATATTTTTTGGTATTAACCACTCAATTTCTAAAGGAACGCGCTCCTGATAATCTAGAGTCCAGTCAGGGATAAAAAGTCCAACAAAGGATTGTTTTAGTCGGAATTGAAATTTGAGTTATTCTGAACGATTATTCCGAAACAAAGGGTATGAAAGTATTGCTTGATGATCGCAGGTGGTGTTACTTCCATGGATGATTTCCTCGTAGAATTCTTCCCCAATGTGTATGAGAGGAAGCATGCAAAACTTCAAGAAACAGATTATTGTAAATATGATGATCAAATATTGACACTATTTACTTCATCTCTCTACTTTGCTGCTCTTGTGTCCACATTTGGTGCTTCAAGTCTAACAAAAAACAAAGGAAGGAGAGCTAGTATCTTAGTTGGTTCTGTAAGCTTCTTTTGTGGAGCTATTCTCAATGCAGCTGCCAAGAATATAGCAATGCTGATCATTGGACGTATTCTTCTTGGAGTTGGTATTGGATTTGGAAATCAAGTAAGTTTAATTTTGGAGTTTAATAACTATTGTTGGGCGCGAGAGAGTATAAAGAGAAAAACCAAAATCTCAGATTGAATAGAGATAAGGTCTTACATGAGTTTATAAAGATAGAAACACATCACCTTACAAATTGTTTTTGCACAAATGAGTTAGGCTTAGTATAAAAATTTAATATGGTGTCACCAAACACATGAGTTTTCGTTTTTTGTTCACCAAATACTTTGTGATTAATGCATAGTTAGTACTTTTTTTTTACCTTAACATGTCCTCAAGATAAAAAATATGGTCACGAATTTTACTCGCATATCATGATTTTTCTAATTATTATGGTGCAGGCTGTTCCTCTATATCTTTCAGAAATGGCACCAGCAAAAATTAGAGGAGCAGTGAACCAACTCTTCCAATTAACAACATGTTTAGGAATTTTGATTGCTAACCTTGTGAATTATGGTACTGAGAAAATTCATCCTTGGGGATGGAGGTTATCTCTAGGTTTAGCAACAGTTCCAGCAACATTCATGTTCATCGGAGGTGTTTTTTGTCCAGAAACACCAAACAGTCTCGTTGAACAAGGCCGAATCGATGAAGGAAGAGTAGTGTTGGAAAAGATTAGAGGAACCAGAAATGTTGATGCTGAATTTGATGATCTTATTGAGGCTAGCCGAGAAGCAAAATCTATTAAGAATCCATTTCAGAATCTTCTTTTGAGAAAGAATAGACCTCAATTCATCATTGGTGCAATTTGTATTCCAGCATTTCAACAACTAACTGGAAACAACTCTATTCTATTCTATGCTCCTGTTATTTTCCAAACAATTGGATTTGGCTCTGGTGCATCTCTATATTCATCTGTTATTACAAGTGTTGCTCTTGTTCTTGCTACACTCATCTCAATGGCTTTGGTTGACAAGTTCGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTACTGAAATGATAATATGCATGGTAATTACATCTTTCATATACATTATTAAGAGTCATGATAAGTTGCTATTTTCTGCGTGCCTTTAGGGCACAAGTTAAGAATCTTAGAAAAAAATTAAAACATAAATTTTGTAGCGAAAAAAAAAGTTTTTATGATTGAGACATTGAATGCACAATTTCCAAAATTATGTTTCTACATTTGGTTTCTTAACTTGTTACTTAAGGAAAAAGTTAACATTTCTCTATTTTTAACCTACTTTAGATGAACTATTCTAAGAATACTAGATGTTTGTATGGACATGTTTTAGCTTATCTTTTCACATAAACTCTTGAAGACTGTTTGGAATAATTTATGACACTTTCATAAGTTATTTTCAGTTTGACTCTATTTTATCTTTTGTTGCTAATTTGAGGATTTTTTGTGGTGGTTGTGAAATTTGCAGATTGCCACTGCTATAGTTTTGGCTACTTGTTTTGGAGATGGAAAGCAACTGTCATTTGGAGTTGCTATCTTTCTAGTTTTGGTGATTTTCTTATTTGTTTTGGCTTATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCTAGTGAACTCTTTCCATTAGAGATAAGGTCATCTGCACAAAGTGTTGTGGTGTGTGTCAACATGATCTTCACTGCCATCGTCGCACAATTCTTCCTTGTGTCACTTTGCCACCTCAAATACGGAATCTTCTTGCTTTTTGCTGCATTGATTGTCCTTATGAGCTGCTTTGTCTACTTCCTCTTGCCAGAAACCAAGCAAGTTCCAATTGAAGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAATATTGTCAAAGACGAAAACAAGGGGTCCGAGACACAAGCATAA
Protein sequence

>MS.gene69039.t1

MAGGAFADGSTLKRAHLYEHKITGYLIFSCIIGALGGALFGYDLGVSGGVTSMDDFLVEFFPNVYERKHAKLQETDYCKYDDQILTLFTSSLYFAALVSTFGASSLTKNKGRRASILVGSVSFFCGAILNAAAKNIAMLIIGRILLGVGIGFGNQAVPLYLSEMAPAKIRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPATFMFIGGVFCPETPNSLVEQGRIDEGRVVLEKIRGTRNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQFIIGAICIPAFQQLTGNNSILFYAPVIFQTIGFGSGASLYSSVITSVALVLATLISMALVDKFGRRAFFLEAGTEMIICMIATAIVLATCFGDGKQLSFGVAIFLVLVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVYFLLPETKQVPIEEIYLLFENHWFWKNIVKDENKGSETQA