Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70180.t1 | XP_003630314.1 | 85.8 | 332 | 21 | 2 | 1 | 306 | 1 | 332 | 8.50E-148 | 533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70180.t1 | G7LEY0 | 85.8 | 332 | 21 | 2 | 1 | 306 | 1 | 332 | 6.1e-148 | 533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene70180 | 0.803507 | 3.37E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene70180 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene70180 | 0.823668 | 1.22E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene70180 | 0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene056549 | MS.gene70180 | 0.801919 | 7.17E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene70180 | 0.807865 | 4.10E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene70180 | 0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene70180 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene70180 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene70180 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene70180 | 0.800302 | 1.54E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70180.t1 | MTR_8g094200 | 87.651 | 332 | 15 | 2 | 1 | 306 | 1 | 332 | 0.0 | 567 |
| MS.gene70180.t1 | MTR_8g094200 | 82.534 | 292 | 25 | 2 | 1 | 266 | 1 | 292 | 1.16e-175 | 487 |
| MS.gene70180.t1 | MTR_3g096860 | 64.762 | 210 | 72 | 1 | 92 | 301 | 101 | 308 | 5.29e-103 | 304 |
| MS.gene70180.t1 | MTR_3g096860 | 60.215 | 186 | 72 | 1 | 92 | 277 | 101 | 284 | 1.68e-83 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70180.t1 | AT4G33480 | 68.720 | 211 | 65 | 1 | 92 | 301 | 124 | 334 | 1.49e-101 | 301 |
Find 57 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTACTGGTGTTGCTTC+TGG | 0.256857 | 4.1:-7941328 | MS.gene70180:CDS |
| AAGAATTGGAATGAGAATTA+AGG | 0.278335 | 4.1:+7941539 | None:intergenic |
| ACAGAAAATTGTAGAAGAAT+TGG | 0.315728 | 4.1:+7941525 | None:intergenic |
| GCAAACCCGGTGGGAGGTTC+CGG | 0.321014 | 4.1:+7941271 | None:intergenic |
| TCCTGATGATATGCCGTTGC+CGG | 0.337706 | 4.1:-7941290 | MS.gene70180:CDS |
| GATGTTCAAAATGTTGTTAC+TGG | 0.344264 | 4.1:-7941340 | MS.gene70180:CDS |
| CTTCAGTTGAAACTGATGAT+TGG | 0.355516 | 4.1:-7941420 | MS.gene70180:intron |
| AAATTCAGTCTCCTCGTCTA+TGG | 0.365085 | 4.1:+7936574 | None:intergenic |
| TTAATTACTTACGTGTCAAC+GGG | 0.394038 | 4.1:+7941021 | None:intergenic |
| CATTTGTGAACAGGACTTGC+TGG | 0.414686 | 4.1:-7936618 | MS.gene70180:intron |
| TTCTGCTTACTTCAACAAAT+CGG | 0.416331 | 4.1:-7941228 | MS.gene70180:CDS |
| CAATAATTCAAAATCAGTAT+TGG | 0.434374 | 4.1:+7941384 | None:intergenic |
| TTCCGTTGGAGTGTGTGGTT+CGG | 0.440368 | 4.1:-7941089 | MS.gene70180:CDS |
| TTATTTGTGCAGGGTGAGAA+TGG | 0.443645 | 4.1:-7936999 | MS.gene70180:intron |
| TTTAATTACTTACGTGTCAA+CGG | 0.461784 | 4.1:+7941020 | None:intergenic |
| TCCGGCAACGGCATATCATC+AGG | 0.470462 | 4.1:+7941289 | None:intergenic |
| GGAGACTGAATTTAATGCCT+TGG | 0.472300 | 4.1:-7936564 | MS.gene70180:CDS |
| TCCAACGGAAGGTTATTCAT+AGG | 0.482809 | 4.1:+7941102 | None:intergenic |
| GGGTTTGCCATTGACGAAAA+CGG | 0.491547 | 4.1:-7941256 | MS.gene70180:CDS |
| CCGTTGCCGGAACCTCCCAC+CGG | 0.491708 | 4.1:-7941277 | MS.gene70180:CDS |
| AACAAGATGCATGTGTATCT+TGG | 0.502259 | 4.1:+7939931 | None:intergenic |
| GACTGAATTTAATGCCTTGG+TGG | 0.506705 | 4.1:-7936561 | MS.gene70180:intron |
| GCGAGCGCATACGCTGCAGC+AGG | 0.519080 | 4.1:+7939953 | None:intergenic |
| TCCTATGAATAACCTTCCGT+TGG | 0.519345 | 4.1:-7941103 | MS.gene70180:CDS |
| GTGCTCTTCAATATTTGCAC+AGG | 0.520741 | 4.1:+7940910 | None:intergenic |
| ACTTCAGTTTGTTGTTGTGA+AGG | 0.541807 | 4.1:-7937929 | MS.gene70180:intron |
| ACATGCATCTTGTTTACAGC+GGG | 0.542894 | 4.1:-7939922 | MS.gene70180:intron |
| CCGGTGGGAGGTTCCGGCAA+CGG | 0.543817 | 4.1:+7941277 | None:intergenic |
| TGCACTTATTGAAGCAATGA+TGG | 0.547958 | 4.1:-7936280 | MS.gene70180:CDS |
| AATTGCAACTGCTGCTGCTG+AGG | 0.548569 | 4.1:+7941621 | None:intergenic |
| CGTTGCCGGAACCTCCCACC+GGG | 0.548585 | 4.1:-7941276 | MS.gene70180:CDS |
| ATCATCAGGATAAAATAAAG+AGG | 0.555773 | 4.1:+7941303 | None:intergenic |
| TATTTGTGCAGGGTGAGAAT+GGG | 0.556129 | 4.1:-7936998 | MS.gene70180:intron |
| CTTACAGCTGACCATCCATC+AGG | 0.563519 | 4.1:+7940886 | None:intergenic |
| TCTATGGCGTCAATGACAGC+AGG | 0.580809 | 4.1:+7936590 | None:intergenic |
| TAACCTTCCGTTGGAGTGTG+TGG | 0.581027 | 4.1:-7941094 | MS.gene70180:CDS |
| TTCACAACAACAAACTGAAG+TGG | 0.585546 | 4.1:+7937931 | None:intergenic |
| TTCGTCAATGGCAAACCCGG+TGG | 0.591270 | 4.1:+7941261 | None:intergenic |
| ATATTGAAGAGCACACCTGA+TGG | 0.594346 | 4.1:-7940901 | MS.gene70180:CDS |
| TGCAGATGATGGTAATGAAG+TGG | 0.597707 | 4.1:-7938754 | MS.gene70180:intron |
| TGAAGAGCACACCTGATGGA+TGG | 0.603729 | 4.1:-7940897 | MS.gene70180:CDS |
| TGAGAATGGGATGTTTCAAA+TGG | 0.603878 | 4.1:-7936985 | MS.gene70180:CDS |
| GTAATTTCTACACCATCACT+TGG | 0.605477 | 4.1:+7938723 | None:intergenic |
| GTGGATGGCTTGCCAAGTGA+TGG | 0.606609 | 4.1:-7938735 | MS.gene70180:CDS |
| ACAAACTGAAGTGGTTCAGA+TGG | 0.608941 | 4.1:+7937940 | None:intergenic |
| CTCCGAACCACACACTCCAA+CGG | 0.614714 | 4.1:+7941087 | None:intergenic |
| TCGTCAATGGCAAACCCGGT+GGG | 0.620091 | 4.1:+7941262 | None:intergenic |
| GAACCACACACTCCAACGGA+AGG | 0.636707 | 4.1:+7941091 | None:intergenic |
| CACATGCATCTTGTTTACAG+CGG | 0.646015 | 4.1:-7939923 | MS.gene70180:CDS |
| TCAATGGCAAACCCGGTGGG+AGG | 0.656601 | 4.1:+7941265 | None:intergenic |
| TGTCATTGACGCCATAGACG+AGG | 0.663191 | 4.1:-7936585 | MS.gene70180:CDS |
| TACTGTTACACAGCACGTGG+CGG | 0.668638 | 4.1:-7939811 | MS.gene70180:CDS |
| GATATACTTGACTTCCACAC+AGG | 0.674786 | 4.1:-7939769 | MS.gene70180:intron |
| GATGATGGTAATGAAGTGGA+TGG | 0.699911 | 4.1:-7938750 | MS.gene70180:CDS |
| TAATTACTTACGTGTCAACG+GGG | 0.705064 | 4.1:+7941022 | None:intergenic |
| AGGTACTGTTACACAGCACG+TGG | 0.735751 | 4.1:-7939814 | MS.gene70180:CDS |
| AAGGAAGTCACATACCACCA+AGG | 0.744300 | 4.1:+7936547 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAGGGAA+AGG | + | chr4.1:7937838-7937857 | None:intergenic | 15.0% |
| !! | AAAATGAAAAGTTAATCTTT+AGG | - | chr4.1:7938986-7939005 | MS.gene70180:intron | 15.0% |
| !! | AAAATTAAATAACACGATTT+AGG | + | chr4.1:7937287-7937306 | None:intergenic | 15.0% |
| !! | AATTAAAATCTATGTTTGTA+TGG | - | chr4.1:7937733-7937752 | MS.gene70180:intron | 15.0% |
| !! | ACGTAGAAAAAAAAAAAAAA+AGG | + | chr4.1:7937844-7937863 | None:intergenic | 15.0% |
| !! | AGATATTATGATAATTAACT+TGG | - | chr4.1:7940869-7940888 | MS.gene70180:intron | 15.0% |
| !! | ATCATAATTTACTAAAAAGA+AGG | + | chr4.1:7941369-7941388 | None:intergenic | 15.0% |
| !! | ATGAAAATATGTTAATAAGT+CGG | - | chr4.1:7940257-7940276 | MS.gene70180:intron | 15.0% |
| !! | CGTAGAAAAAAAAAAAAAAA+GGG | + | chr4.1:7937843-7937862 | None:intergenic | 15.0% |
| !!! | ATTTTAAATAAGTTGTTAAC+AGG | - | chr4.1:7936764-7936783 | MS.gene70180:intron | 15.0% |
| !!! | GCTTCTAAATTTAAAATTAA+TGG | + | chr4.1:7939651-7939670 | None:intergenic | 15.0% |
| !!! | GGTAATTTTATTAACTTAAT+TGG | - | chr4.1:7939206-7939225 | MS.gene70180:intron | 15.0% |
| !!! | TCTTATAATCCAATTTTATA+AGG | - | chr4.1:7940291-7940310 | MS.gene70180:intron | 15.0% |
| !!! | TTATTTTAGTTTTTGTGATA+TGG | - | chr4.1:7937695-7937714 | MS.gene70180:intron | 15.0% |
| !!! | TTTATTATTATTGATGACTA+TGG | - | chr4.1:7936938-7936957 | MS.gene70180:intron | 15.0% |
| !!! | TTTTGTAGTTAATTAATGAT+TGG | + | chr4.1:7940959-7940978 | None:intergenic | 15.0% |
| !! | AAAATGTTCATACAAAAATG+GGG | - | chr4.1:7937430-7937449 | MS.gene70180:intron | 20.0% |
| !! | AAGAAAATATATAGGAGAAT+TGG | + | chr4.1:7940615-7940634 | None:intergenic | 20.0% |
| !! | AGGAAGTTATTATCAATATA+TGG | - | chr4.1:7939006-7939025 | MS.gene70180:intron | 20.0% |
| !! | ATAACAAACAACGAAATATT+GGG | + | chr4.1:7937633-7937652 | None:intergenic | 20.0% |
| !! | ATAAGTTCATTTCAATGAAT+TGG | + | chr4.1:7939385-7939404 | None:intergenic | 20.0% |
| !! | ATACAAATACTTCATAGTTT+AGG | + | chr4.1:7937605-7937624 | None:intergenic | 20.0% |
| !! | ATCTTAAACAAGTCTATAAA+AGG | + | chr4.1:7940720-7940739 | None:intergenic | 20.0% |
| !! | ATGCTTTAATAAGAGTTTAA+TGG | - | chr4.1:7937327-7937346 | MS.gene70180:intron | 20.0% |
| !! | ATTCTTAATGTTATCTTGAA+TGG | - | chr4.1:7937107-7937126 | MS.gene70180:intron | 20.0% |
| !! | ATTTAACTAATATTCAGAAG+AGG | - | chr4.1:7940078-7940097 | MS.gene70180:intron | 20.0% |
| !! | CAAAATGTTCATACAAAAAT+GGG | - | chr4.1:7937429-7937448 | MS.gene70180:intron | 20.0% |
| !! | CAATAATTCAAAATCAGTAT+TGG | + | chr4.1:7936513-7936532 | None:intergenic | 20.0% |
| !! | CATGGAATAAATAGTTAAAA+AGG | + | chr4.1:7941531-7941550 | None:intergenic | 20.0% |
| !! | CTTATTCTTGTGATATTATA+AGG | - | chr4.1:7938481-7938500 | MS.gene70180:intron | 20.0% |
| !! | GAAGTTGCTAAATTATAATA+CGG | + | chr4.1:7938635-7938654 | None:intergenic | 20.0% |
| !! | GTGAAGTGAAAAATAAAAAA+CGG | + | chr4.1:7939342-7939361 | None:intergenic | 20.0% |
| !! | TCAAAATGTTCATACAAAAA+TGG | - | chr4.1:7937428-7937447 | MS.gene70180:intron | 20.0% |
| !! | TGAAAATATGTTAATAAGTC+GGG | - | chr4.1:7940258-7940277 | MS.gene70180:intron | 20.0% |
| !! | TGAAGTGAAAAATAAAAAAC+GGG | + | chr4.1:7939341-7939360 | None:intergenic | 20.0% |
| !! | TTCATGATATAAACACAATA+TGG | + | chr4.1:7939587-7939606 | None:intergenic | 20.0% |
| !! | TTTAGTAAATTATGATACGA+TGG | - | chr4.1:7941373-7941392 | MS.gene70180:CDS | 20.0% |
| !!! | AAATTGAGATTTAAAATGCA+GGG | + | chr4.1:7937040-7937059 | None:intergenic | 20.0% |
| !!! | AAATTTAAAATTAATGGACG+AGG | + | chr4.1:7939645-7939664 | None:intergenic | 20.0% |
| !!! | AACATTTTGAACATCATTAT+CGG | + | chr4.1:7936549-7936568 | None:intergenic | 20.0% |
| !!! | AATATTTCGTTGTTTGTTAT+GGG | - | chr4.1:7937633-7937652 | MS.gene70180:intron | 20.0% |
| !!! | AGAAATTACATATTTTGATC+TGG | - | chr4.1:7939185-7939204 | MS.gene70180:intron | 20.0% |
| !!! | ATATGGAATTTTATTAATGC+AGG | - | chr4.1:7936961-7936980 | MS.gene70180:intron | 20.0% |
| !!! | ATTGAATTTGAAACTAAGAA+AGG | + | chr4.1:7940996-7941015 | None:intergenic | 20.0% |
| !!! | TAGATCTGAATTTTTACAAT+TGG | - | chr4.1:7940835-7940854 | MS.gene70180:intron | 20.0% |
| !!! | TTGTATGAACATTTTGAAAT+TGG | + | chr4.1:7937425-7937444 | None:intergenic | 20.0% |
| !!! | TTTTGAAATGAAACTGAAAT+TGG | + | chr4.1:7936335-7936354 | None:intergenic | 20.0% |
| ! | AAAAAGAATGTCATTGTATG+TGG | + | chr4.1:7937791-7937810 | None:intergenic | 25.0% |
| ! | AAAAGGAAAACGTTTGATAT+TGG | - | chr4.1:7940054-7940073 | MS.gene70180:intron | 25.0% |
| ! | AAAGACTTGATAAAAACAGA+TGG | + | chr4.1:7939483-7939502 | None:intergenic | 25.0% |
| ! | AAGAATTGGAATGAGAATTA+AGG | + | chr4.1:7936358-7936377 | None:intergenic | 25.0% |
| ! | AAGACTTGATAAAAACAGAT+GGG | + | chr4.1:7939482-7939501 | None:intergenic | 25.0% |
| ! | AAGCATTATTCAAAGAGATT+TGG | + | chr4.1:7937313-7937332 | None:intergenic | 25.0% |
| ! | AATAAAAATGAGTGATATGC+AGG | + | chr4.1:7937680-7937699 | None:intergenic | 25.0% |
| ! | AATCAAGCATGAAAAAACTT+AGG | + | chr4.1:7938912-7938931 | None:intergenic | 25.0% |
| ! | AATCAATCGCCTTATAAAAT+TGG | + | chr4.1:7940303-7940322 | None:intergenic | 25.0% |
| ! | ACAAGAATAATGTATAGATC+AGG | + | chr4.1:7939520-7939539 | None:intergenic | 25.0% |
| ! | ACAGAAAATTGTAGAAGAAT+TGG | + | chr4.1:7936372-7936391 | None:intergenic | 25.0% |
| ! | ACTACTATAAACTAAAAGAG+AGG | + | chr4.1:7938405-7938424 | None:intergenic | 25.0% |
| ! | ATAAAAATGAGTGATATGCA+GGG | + | chr4.1:7937679-7937698 | None:intergenic | 25.0% |
| ! | ATCAAGCATGAAAAAACTTA+GGG | + | chr4.1:7938911-7938930 | None:intergenic | 25.0% |
| ! | ATCATCAGGATAAAATAAAG+AGG | + | chr4.1:7936594-7936613 | None:intergenic | 25.0% |
| ! | CAGTTGGAAAAATGAAAATT+AGG | + | chr4.1:7938935-7938954 | None:intergenic | 25.0% |
| ! | CATAACAAACAACGAAATAT+TGG | + | chr4.1:7937634-7937653 | None:intergenic | 25.0% |
| ! | CGAGTAACAATGAATATATA+TGG | + | chr4.1:7938851-7938870 | None:intergenic | 25.0% |
| ! | GAAAATATGTTAATAAGTCG+GGG | - | chr4.1:7940259-7940278 | MS.gene70180:intron | 25.0% |
| ! | GAATTTATGTTTACAACTAC+TGG | - | chr4.1:7938567-7938586 | MS.gene70180:intron | 25.0% |
| ! | GATATTATAAGGAGATGTTT+GGG | - | chr4.1:7938492-7938511 | MS.gene70180:intron | 25.0% |
| ! | TAAACAAGTCTATAAAAGGA+GGG | + | chr4.1:7940716-7940735 | None:intergenic | 25.0% |
| ! | TATAATTTCATGTGCAAGTT+AGG | - | chr4.1:7938752-7938771 | MS.gene70180:CDS | 25.0% |
| ! | TCTAATGTGAGTTTACTTTA+AGG | - | chr4.1:7937140-7937159 | MS.gene70180:intron | 25.0% |
| ! | TCTAATTATGCAACAATTCA+TGG | + | chr4.1:7938782-7938801 | None:intergenic | 25.0% |
| ! | TCTCAATAATTGATGAGAAA+AGG | + | chr4.1:7937249-7937268 | None:intergenic | 25.0% |
| ! | TCTCGTATGCATTTATAATA+TGG | - | chr4.1:7941158-7941177 | MS.gene70180:intron | 25.0% |
| ! | TGATATTATAAGGAGATGTT+TGG | - | chr4.1:7938491-7938510 | MS.gene70180:intron | 25.0% |
| ! | TTAAACAAGTCTATAAAAGG+AGG | + | chr4.1:7940717-7940736 | None:intergenic | 25.0% |
| ! | TTAAATAACACGATTTAGGT+TGG | + | chr4.1:7937283-7937302 | None:intergenic | 25.0% |
| ! | TTAGCAAATACAACTCTAAA+CGG | + | chr4.1:7938325-7938344 | None:intergenic | 25.0% |
| ! | TTATTATCAATATATGGCCA+GGG | - | chr4.1:7939012-7939031 | MS.gene70180:intron | 25.0% |
| ! | TTGACACGTAAGTAATTAAA+AGG | - | chr4.1:7936877-7936896 | MS.gene70180:intron | 25.0% |
| ! | TTTAATTACTTACGTGTCAA+CGG | + | chr4.1:7936877-7936896 | None:intergenic | 25.0% |
| ! | TTTATACGAACACAGAATTT+GGG | + | chr4.1:7940335-7940354 | None:intergenic | 25.0% |
| !! | AGAAAGTACAATCAATACTA+CGG | + | chr4.1:7939559-7939578 | None:intergenic | 25.0% |
| !! | ATTAAAAGGTTTTACAACGT+CGG | - | chr4.1:7936891-7936910 | MS.gene70180:intron | 25.0% |
| !! | ATTATTGATGACTATGGATA+TGG | - | chr4.1:7936944-7936963 | MS.gene70180:intron | 25.0% |
| !! | CAAATTGAGATTTAAAATGC+AGG | + | chr4.1:7937041-7937060 | None:intergenic | 25.0% |
| !! | CAATATTTCGTTGTTTGTTA+TGG | - | chr4.1:7937632-7937651 | MS.gene70180:intron | 25.0% |
| !! | CTAAAAACTTGTCAAGTTTT+TGG | - | chr4.1:7938341-7938360 | MS.gene70180:intron | 25.0% |
| !! | GAAATATGTATTTTCCCATA+AGG | + | chr4.1:7937816-7937835 | None:intergenic | 25.0% |
| !! | TATTTTTCACTTCACTAGTA+TGG | - | chr4.1:7939347-7939366 | MS.gene70180:intron | 25.0% |
| !! | TTTATAGTAGTGTTTTTCGT+GGG | - | chr4.1:7938414-7938433 | MS.gene70180:intron | 25.0% |
| !! | TTTGAAACTAAGAAAGGAAT+TGG | + | chr4.1:7940990-7941009 | None:intergenic | 25.0% |
| !! | TTTTATACGAACACAGAATT+TGG | + | chr4.1:7940336-7940355 | None:intergenic | 25.0% |
| !!! | AACGTTTTCCTTTTAATTTC+TGG | + | chr4.1:7940048-7940067 | None:intergenic | 25.0% |
| !!! | ACTTTTTCTTTCTAAATCGA+GGG | - | chr4.1:7939700-7939719 | MS.gene70180:intron | 25.0% |
| !!! | CTGTAGATCATCATTTTTAA+AGG | + | chr4.1:7937511-7937530 | None:intergenic | 25.0% |
| !!! | GAAAATTGATGGATTTTCAT+TGG | - | chr4.1:7937459-7937478 | MS.gene70180:intron | 25.0% |
| !!! | TAATAGTCCTTTTTTTTTGC+AGG | - | chr4.1:7939905-7939924 | MS.gene70180:intron | 25.0% |
| !!! | TATGAACATTTTGAAATTGG+TGG | + | chr4.1:7937422-7937441 | None:intergenic | 25.0% |
| !!! | TCTGTTTTTATCAAGTCTTT+TGG | - | chr4.1:7939483-7939502 | MS.gene70180:intron | 25.0% |
| !!! | TCTTATTTTCTATTTCTGCA+AGG | + | chr4.1:7940172-7940191 | None:intergenic | 25.0% |
| !!! | TTGATTTTTTTTCTCAATCG+AGG | - | chr4.1:7939250-7939269 | MS.gene70180:intron | 25.0% |
| !!! | TTTTATAAGGCGATTGATTT+AGG | - | chr4.1:7940304-7940323 | MS.gene70180:intron | 25.0% |
| AAAATATCTCTGTCCATATC+AGG | - | chr4.1:7938060-7938079 | MS.gene70180:intron | 30.0% | |
| AAACAAGTCTATAAAAGGAG+GGG | + | chr4.1:7940715-7940734 | None:intergenic | 30.0% | |
| ACAGAAGACAAATTCACATA+TGG | - | chr4.1:7941468-7941487 | MS.gene70180:intron | 30.0% | |
| ACATTAGTACTTCAGAGAAT+GGG | + | chr4.1:7938169-7938188 | None:intergenic | 30.0% | |
| AGACGGAGAAGAAAATATAT+AGG | + | chr4.1:7940623-7940642 | None:intergenic | 30.0% | |
| ATATTAAGGCAACCAAAATC+TGG | + | chr4.1:7941105-7941124 | None:intergenic | 30.0% | |
| ATTCATTCTCCTTAGTAAGA+AGG | + | chr4.1:7938450-7938469 | None:intergenic | 30.0% | |
| CTTAACATTATTCCCATAGT+GGG | + | chr4.1:7940213-7940232 | None:intergenic | 30.0% | |
| GAAAAAGGGAAAGAAATAGA+GGG | + | chr4.1:7940692-7940711 | None:intergenic | 30.0% | |
| GATAGTTGTAAAGTGACTAT+TGG | + | chr4.1:7939756-7939775 | None:intergenic | 30.0% | |
| GATGTTCAAAATGTTGTTAC+TGG | - | chr4.1:7936554-7936573 | MS.gene70180:intron | 30.0% | |
| GTAAAACTATTTCACAGTGA+CGG | + | chr4.1:7937360-7937379 | None:intergenic | 30.0% | |
| GTATCTTCCTGCAAAAAAAA+AGG | + | chr4.1:7939915-7939934 | None:intergenic | 30.0% | |
| GTTATTATCAATATATGGCC+AGG | - | chr4.1:7939011-7939030 | MS.gene70180:intron | 30.0% | |
| GTTGCATCTAATCTTCATTT+AGG | - | chr4.1:7937077-7937096 | MS.gene70180:intron | 30.0% | |
| TAAAAAAATACTTGCCTGTG+TGG | + | chr4.1:7938142-7938161 | None:intergenic | 30.0% | |
| TAGAGTGTAAACAAAGCAAA+GGG | - | chr4.1:7938205-7938224 | MS.gene70180:intron | 30.0% | |
| TATCACAAGAATAAGTGACT+TGG | + | chr4.1:7938476-7938495 | None:intergenic | 30.0% | |
| TCGTCAAACTTAATGTAACA+TGG | + | chr4.1:7941549-7941568 | None:intergenic | 30.0% | |
| TCTTAACATTATTCCCATAG+TGG | + | chr4.1:7940214-7940233 | None:intergenic | 30.0% | |
| TTAATTACTTACGTGTCAAC+GGG | + | chr4.1:7936876-7936895 | None:intergenic | 30.0% | |
| TTAGAGTGTAAACAAAGCAA+AGG | - | chr4.1:7938204-7938223 | MS.gene70180:intron | 30.0% | |
| TTCATTCTCCTTAGTAAGAA+GGG | + | chr4.1:7938449-7938468 | None:intergenic | 30.0% | |
| TTCTGCTTACTTCAACAAAT+CGG | - | chr4.1:7936666-7936685 | MS.gene70180:intron | 30.0% | |
| ! | AGGAGAATTTTTCTGTGATT+TGG | + | chr4.1:7936402-7936421 | None:intergenic | 30.0% |
| ! | CTTTTTCTTCGTCTTCTTTT+TGG | + | chr4.1:7936447-7936466 | None:intergenic | 30.0% |
| ! | GACATTCTTTTTGACCTTAT+GGG | - | chr4.1:7937799-7937818 | MS.gene70180:intron | 30.0% |
| ! | GCTTTGTATAGATGCATTTT+TGG | - | chr4.1:7939611-7939630 | MS.gene70180:intron | 30.0% |
| ! | GTTTATAGTAGTGTTTTTCG+TGG | - | chr4.1:7938413-7938432 | MS.gene70180:intron | 30.0% |
| ! | TAAATTTAGAAGCGTGACAA+AGG | - | chr4.1:7939658-7939677 | MS.gene70180:intron | 30.0% |
| ! | TAATACCATTTTGCAGATGA+TGG | - | chr4.1:7939129-7939148 | MS.gene70180:intron | 30.0% |
| ! | TGACATTCTTTTTGACCTTA+TGG | - | chr4.1:7937798-7937817 | MS.gene70180:intron | 30.0% |
| ! | TTGGTTGCCTTAATATTTTC+CGG | - | chr4.1:7941109-7941128 | MS.gene70180:CDS | 30.0% |
| !! | GACTTTTTCTTTCTAAATCG+AGG | - | chr4.1:7939699-7939718 | MS.gene70180:intron | 30.0% |
| !! | TAGGTTTTGTAGTGGAATTT+GGG | + | chr4.1:7940574-7940593 | None:intergenic | 30.0% |
| AAAGAAGCTCATTTGTCGAT+GGG | - | chr4.1:7937168-7937187 | MS.gene70180:intron | 35.0% | |
| AACAAGATGCATGTGTATCT+TGG | + | chr4.1:7937966-7937985 | None:intergenic | 35.0% | |
| AACAAGTCTATAAAAGGAGG+GGG | + | chr4.1:7940714-7940733 | None:intergenic | 35.0% | |
| AAGCCTATCCAAGATTCATA+AGG | - | chr4.1:7940354-7940373 | MS.gene70180:intron | 35.0% | |
| AATTTCATGTGCAAGTTAGG+TGG | - | chr4.1:7938755-7938774 | MS.gene70180:intron | 35.0% | |
| ACAGAAGGAAGACATGAATT+TGG | + | chr4.1:7937884-7937903 | None:intergenic | 35.0% | |
| ACTACTAGTATTCACAGAGT+AGG | + | chr4.1:7940799-7940818 | None:intergenic | 35.0% | |
| AGATTGAAAGTAACCATTGC+AGG | - | chr4.1:7940016-7940035 | MS.gene70180:intron | 35.0% | |
| AGCAAAGGGTTTATTCAGTT+TGG | - | chr4.1:7938219-7938238 | MS.gene70180:intron | 35.0% | |
| ATGAAATGATACTCCCACTA+TGG | - | chr4.1:7940197-7940216 | MS.gene70180:intron | 35.0% | |
| ATTTAGACCCCTTCTTACTA+AGG | - | chr4.1:7938438-7938457 | MS.gene70180:intron | 35.0% | |
| CAACTACTGGACTTAAAGTT+TGG | - | chr4.1:7938580-7938599 | MS.gene70180:intron | 35.0% | |
| CAGAAGGAAGACATGAATTT+GGG | + | chr4.1:7937883-7937902 | None:intergenic | 35.0% | |
| CAGAGAATGGTGAATAAAGA+CGG | + | chr4.1:7940640-7940659 | None:intergenic | 35.0% | |
| CATTACCATCATCTGCAAAA+TGG | + | chr4.1:7939137-7939156 | None:intergenic | 35.0% | |
| CGTAAAAGGGGAGAAAAAAT+AGG | + | chr4.1:7941043-7941062 | None:intergenic | 35.0% | |
| CTACTAGTATTCACAGAGTA+GGG | + | chr4.1:7940798-7940817 | None:intergenic | 35.0% | |
| CTTCAGTTGAAACTGATGAT+TGG | - | chr4.1:7936474-7936493 | MS.gene70180:intron | 35.0% | |
| GAATCGTACTACACTTTAAC+AGG | + | chr4.1:7938267-7938286 | None:intergenic | 35.0% | |
| GACATTAGTACTTCAGAGAA+TGG | + | chr4.1:7938170-7938189 | None:intergenic | 35.0% | |
| GCTTGTGATTTAATCTGCTA+AGG | - | chr4.1:7941250-7941269 | MS.gene70180:CDS | 35.0% | |
| GGAAAAAGGGAAAGAAATAG+AGG | + | chr4.1:7940693-7940712 | None:intergenic | 35.0% | |
| GGATCACACCAGAAATTAAA+AGG | - | chr4.1:7940037-7940056 | MS.gene70180:intron | 35.0% | |
| GTAATTTCTACACCATCACT+TGG | + | chr4.1:7939174-7939193 | None:intergenic | 35.0% | |
| GTCTCACATTGAATATGATC+TGG | - | chr4.1:7940469-7940488 | MS.gene70180:intron | 35.0% | |
| TAAAGAAGCTCATTTGTCGA+TGG | - | chr4.1:7937167-7937186 | MS.gene70180:intron | 35.0% | |
| TAAGTGTTTCCAAGTTAGCA+AGG | - | chr4.1:7939281-7939300 | MS.gene70180:intron | 35.0% | |
| TAATTACTTACGTGTCAACG+GGG | + | chr4.1:7936875-7936894 | None:intergenic | 35.0% | |
| TACAAACTTGGGTAGAACTT+TGG | - | chr4.1:7939857-7939876 | MS.gene70180:intron | 35.0% | |
| TAGGAAACACAACACAAACA+TGG | + | chr4.1:7941580-7941599 | None:intergenic | 35.0% | |
| TATAAAAGGAGGGGGAAAAA+GGG | + | chr4.1:7940706-7940725 | None:intergenic | 35.0% | |
| TCATTCTCCTTAGTAAGAAG+GGG | + | chr4.1:7938448-7938467 | None:intergenic | 35.0% | |
| TCGACAAATGAGCTTCTTTA+CGG | + | chr4.1:7937167-7937186 | None:intergenic | 35.0% | |
| TGAAATGATACTCCCACTAT+GGG | - | chr4.1:7940198-7940217 | MS.gene70180:intron | 35.0% | |
| TGACCTTATGAATCTTGGAT+AGG | + | chr4.1:7940360-7940379 | None:intergenic | 35.0% | |
| TGAGAATGGGATGTTTCAAA+TGG | - | chr4.1:7940909-7940928 | MS.gene70180:CDS | 35.0% | |
| TGCACTTATTGAAGCAATGA+TGG | - | chr4.1:7941614-7941633 | MS.gene70180:CDS | 35.0% | |
| TGCATACGAGAAACAAAAGT+TGG | + | chr4.1:7941149-7941168 | None:intergenic | 35.0% | |
| TTCACAACAACAAACTGAAG+TGG | + | chr4.1:7939966-7939985 | None:intergenic | 35.0% | |
| TTGTGATATGGACAGATAAC+AGG | - | chr4.1:7937707-7937726 | MS.gene70180:intron | 35.0% | |
| TTTCTTTCTAAATCGAGGGA+GGG | - | chr4.1:7939704-7939723 | MS.gene70180:intron | 35.0% | |
| ! | AAATGGCTGATGATGTAAGT+AGG | - | chr4.1:7940926-7940945 | MS.gene70180:intron | 35.0% |
| ! | AATTTCACCGTTTTCGTCAA+TGG | + | chr4.1:7936648-7936667 | None:intergenic | 35.0% |
| ! | ACAAAAGGTTGTCCAGATTT+TGG | - | chr4.1:7941090-7941109 | MS.gene70180:CDS | 35.0% |
| ! | AGTGTGTTATTGTTCTTCCT+TGG | - | chr4.1:7939424-7939443 | MS.gene70180:intron | 35.0% |
| ! | ATCTCAGAAAAAGGCGTAAA+AGG | + | chr4.1:7941057-7941076 | None:intergenic | 35.0% |
| ! | TCTCAGAAAAAGGCGTAAAA+GGG | + | chr4.1:7941056-7941075 | None:intergenic | 35.0% |
| ! | TGACTTTTGCAACACACTTA+TGG | + | chr4.1:7941445-7941464 | None:intergenic | 35.0% |
| ! | TTGAAATTGGTGGTATGACA+TGG | + | chr4.1:7937412-7937431 | None:intergenic | 35.0% |
| ! | TTTCTTCGTCTTCTTTTTGG+AGG | + | chr4.1:7936444-7936463 | None:intergenic | 35.0% |
| ! | TTTTCTTTCTAAATCGAGGG+AGG | - | chr4.1:7939703-7939722 | MS.gene70180:intron | 35.0% |
| !! | ACTTCAGTTTGTTGTTGTGA+AGG | - | chr4.1:7939965-7939984 | MS.gene70180:CDS | 35.0% |
| !! | AGTTTGACCTTGTCACTTTA+AGG | + | chr4.1:7939802-7939821 | None:intergenic | 35.0% |
| !! | GATGGATTTTCATTGGATGT+CGG | - | chr4.1:7937466-7937485 | MS.gene70180:intron | 35.0% |
| !! | GTAGGTTTTGTAGTGGAATT+TGG | + | chr4.1:7940575-7940594 | None:intergenic | 35.0% |
| !! | GTTTGACCTTGTCACTTTAA+GGG | + | chr4.1:7939801-7939820 | None:intergenic | 35.0% |
| !! | TTTCGTTGTTTGTTATGGGA+TGG | - | chr4.1:7937637-7937656 | MS.gene70180:intron | 35.0% |
| AAACAAAAGCAACACTGGTG+CGG | + | chr4.1:7939459-7939478 | None:intergenic | 40.0% | |
| AAATTCAGTCTCCTCGTCTA+TGG | + | chr4.1:7941323-7941342 | None:intergenic | 40.0% | |
| AAGAGGTTCTTCTCTCTTCT+AGG | - | chr4.1:7940095-7940114 | MS.gene70180:intron | 40.0% | |
| ACAAACTGAAGTGGTTCAGA+TGG | + | chr4.1:7939957-7939976 | None:intergenic | 40.0% | |
| ACATTGAATATGATCTGGCC+TGG | - | chr4.1:7940474-7940493 | MS.gene70180:intron | 40.0% | |
| ACGATAGCAGTAACTGATAG+AGG | + | chr4.1:7940383-7940402 | None:intergenic | 40.0% | |
| ACTCATTCATCACAGTCACA+GGG | - | chr4.1:7937564-7937583 | MS.gene70180:intron | 40.0% | |
| AGAGGTGACCTTATGAATCT+TGG | + | chr4.1:7940365-7940384 | None:intergenic | 40.0% | |
| ATAATGCCACTGTTCTCCAA+TGG | + | chr4.1:7940754-7940773 | None:intergenic | 40.0% | |
| ATATATAGGAGAATTGGCGC+AGG | + | chr4.1:7940609-7940628 | None:intergenic | 40.0% | |
| ATGGGAAACAAAAGCAACAC+TGG | + | chr4.1:7939464-7939483 | None:intergenic | 40.0% | |
| CATTGAATATGATCTGGCCT+GGG | - | chr4.1:7940475-7940494 | MS.gene70180:intron | 40.0% | |
| CTAAGGCAACATTTGTGAAC+AGG | - | chr4.1:7941267-7941286 | MS.gene70180:CDS | 40.0% | |
| CTATAAAAGGAGGGGGAAAA+AGG | + | chr4.1:7940707-7940726 | None:intergenic | 40.0% | |
| CTGTGTAACAGTACCTGATA+TGG | + | chr4.1:7938076-7938095 | None:intergenic | 40.0% | |
| CTTTCAGAAGCTTGTACAAG+TGG | + | chr4.1:7939998-7940017 | None:intergenic | 40.0% | |
| GAACCAAGCAATACTCACTA+TGG | + | chr4.1:7936699-7936718 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGAAGATGG+AGG | + | chr4.1:7936422-7936441 | None:intergenic | 40.0% | |
| GACTGAATTTAATGCCTTGG+TGG | - | chr4.1:7941333-7941352 | MS.gene70180:CDS | 40.0% | |
| GAGGAAGAAGAAGAAGAAGA+TGG | + | chr4.1:7936425-7936444 | None:intergenic | 40.0% | |
| GATATACTTGACTTCCACAC+AGG | - | chr4.1:7938125-7938144 | MS.gene70180:intron | 40.0% | |
| GGAGACTGAATTTAATGCCT+TGG | - | chr4.1:7941330-7941349 | MS.gene70180:CDS | 40.0% | |
| GTGCTCTTCAATATTTGCAC+AGG | + | chr4.1:7936987-7937006 | None:intergenic | 40.0% | |
| GTTCTACCCAAGTTTGTATC+AGG | + | chr4.1:7939855-7939874 | None:intergenic | 40.0% | |
| GTTTGTGTTGTGTTTCCTAC+AGG | - | chr4.1:7941581-7941600 | MS.gene70180:CDS | 40.0% | |
| TACGAACACAGAATTTGGGT+TGG | + | chr4.1:7940331-7940350 | None:intergenic | 40.0% | |
| TACTCATTCATCACAGTCAC+AGG | - | chr4.1:7937563-7937582 | MS.gene70180:intron | 40.0% | |
| TATTTGTGCAGGGTGAGAAT+GGG | - | chr4.1:7940896-7940915 | MS.gene70180:CDS | 40.0% | |
| TCACAATCAGACATGACAGT+TGG | + | chr4.1:7938951-7938970 | None:intergenic | 40.0% | |
| TCCAACGGAAGGTTATTCAT+AGG | + | chr4.1:7936795-7936814 | None:intergenic | 40.0% | |
| TCCTATGAATAACCTTCCGT+TGG | - | chr4.1:7936791-7936810 | MS.gene70180:intron | 40.0% | |
| TGAGAGTCGTTCTCATTTCT+AGG | + | chr4.1:7940535-7940554 | None:intergenic | 40.0% | |
| TTATTTGTGCAGGGTGAGAA+TGG | - | chr4.1:7940895-7940914 | MS.gene70180:CDS | 40.0% | |
| TTCTCACCCTGCACAAATAA+AGG | + | chr4.1:7940895-7940914 | None:intergenic | 40.0% | |
| TTCTTTCTAAATCGAGGGAG+GGG | - | chr4.1:7939705-7939724 | MS.gene70180:intron | 40.0% | |
| ! | AACTTGGCCTTTATTTGTGC+AGG | - | chr4.1:7940885-7940904 | MS.gene70180:intron | 40.0% |
| ! | ACATGCATCTTGTTTACAGC+GGG | - | chr4.1:7937972-7937991 | MS.gene70180:intron | 40.0% |
| ! | ACGAACACAGAATTTGGGTT+GGG | + | chr4.1:7940330-7940349 | None:intergenic | 40.0% |
| ! | ACTTGGCCTTTATTTGTGCA+GGG | - | chr4.1:7940886-7940905 | MS.gene70180:intron | 40.0% |
| ! | AGTTTGCTTCCTTGCTAACT+TGG | + | chr4.1:7939293-7939312 | None:intergenic | 40.0% |
| ! | ATAAGGAGATGTTTGGGACA+TGG | - | chr4.1:7938498-7938517 | MS.gene70180:intron | 40.0% |
| ! | ATATTGAAGAGCACACCTGA+TGG | - | chr4.1:7936993-7937012 | MS.gene70180:intron | 40.0% |
| ! | CACATGCATCTTGTTTACAG+CGG | - | chr4.1:7937971-7937990 | MS.gene70180:intron | 40.0% |
| ! | CTCAGAAAAAGGCGTAAAAG+GGG | + | chr4.1:7941055-7941074 | None:intergenic | 40.0% |
| ! | GATGATGGTAATGAAGTGGA+TGG | - | chr4.1:7939144-7939163 | MS.gene70180:intron | 40.0% |
| ! | TAAGGAGATGTTTGGGACAT+GGG | - | chr4.1:7938499-7938518 | MS.gene70180:intron | 40.0% |
| ! | TCACCATAGTGAGTATTGCT+TGG | - | chr4.1:7936693-7936712 | MS.gene70180:intron | 40.0% |
| ! | TCGCTGATCTAAAACACAGA+AGG | + | chr4.1:7937899-7937918 | None:intergenic | 40.0% |
| ! | TCTGGACAACCTTTTGTAAG+TGG | + | chr4.1:7941087-7941106 | None:intergenic | 40.0% |
| ! | TGCAGATGATGGTAATGAAG+TGG | - | chr4.1:7939140-7939159 | MS.gene70180:intron | 40.0% |
| !! | AAAAGGCGCTAAACAACAGT+TGG | + | chr4.1:7937232-7937251 | None:intergenic | 40.0% |
| !! | ATCAGAGTGCCACTTACAAA+AGG | - | chr4.1:7941075-7941094 | MS.gene70180:CDS | 40.0% |
| !! | TCAAGTCTTTTGGAAGATCG+TGG | - | chr4.1:7939493-7939512 | MS.gene70180:intron | 40.0% |
| !! | TTCTGTGTTTTAGATCAGCG+AGG | - | chr4.1:7937898-7937917 | MS.gene70180:intron | 40.0% |
| !!! | AAGGTTGGTAGGTTTTGTAG+TGG | + | chr4.1:7940582-7940601 | None:intergenic | 40.0% |
| AAGATGCCTGTCATTGCCAT+TGG | - | chr4.1:7940735-7940754 | MS.gene70180:intron | 45.0% | |
| AAGGAAGTCACATACCACCA+AGG | + | chr4.1:7941350-7941369 | None:intergenic | 45.0% | |
| AAGGACTTCAAATCTCGTCG+GGG | + | chr4.1:7939778-7939797 | None:intergenic | 45.0% | |
| AATGTTCAGTCCTGGACATG+AGG | - | chr4.1:7940423-7940442 | MS.gene70180:intron | 45.0% | |
| ACCTTCCAAATGTTCAGTCC+TGG | - | chr4.1:7940415-7940434 | MS.gene70180:intron | 45.0% | |
| AGACGGCCTGATACAAACTT+GGG | - | chr4.1:7939846-7939865 | MS.gene70180:intron | 45.0% | |
| ATGTTCAGTCCTGGACATGA+GGG | - | chr4.1:7940424-7940443 | MS.gene70180:intron | 45.0% | |
| CATGTCCAGGACTGAACATT+TGG | + | chr4.1:7940423-7940442 | None:intergenic | 45.0% | |
| CATTTGGAAGGTGACTTGAG+TGG | + | chr4.1:7940407-7940426 | None:intergenic | 45.0% | |
| CATTTGTGAACAGGACTTGC+TGG | - | chr4.1:7941276-7941295 | MS.gene70180:CDS | 45.0% | |
| GAAAGAAATAGAGGGAGTCG+GGG | + | chr4.1:7940684-7940703 | None:intergenic | 45.0% | |
| GAAGGACTTCAAATCTCGTC+GGG | + | chr4.1:7939779-7939798 | None:intergenic | 45.0% | |
| GAATGCGTTTATCATCACCC+TGG | + | chr4.1:7939032-7939051 | None:intergenic | 45.0% | |
| GCCACAGCCGGAAAATATTA+AGG | + | chr4.1:7941119-7941138 | None:intergenic | 45.0% | |
| GGAAAGAAATAGAGGGAGTC+GGG | + | chr4.1:7940685-7940704 | None:intergenic | 45.0% | |
| GGAAGGACTTCAAATCTCGT+CGG | + | chr4.1:7939780-7939799 | None:intergenic | 45.0% | |
| GGCACTCTGATCTCAGAAAA+AGG | + | chr4.1:7941066-7941085 | None:intergenic | 45.0% | |
| GGGAAAGAAATAGAGGGAGT+CGG | + | chr4.1:7940686-7940705 | None:intergenic | 45.0% | |
| GGGTTTGCCATTGACGAAAA+CGG | - | chr4.1:7936638-7936657 | MS.gene70180:intron | 45.0% | |
| GTCCTTCCCTTAAAGTGACA+AGG | - | chr4.1:7939792-7939811 | MS.gene70180:CDS | 45.0% | |
| TCATTGCCATTGGAGAACAG+TGG | - | chr4.1:7940745-7940764 | MS.gene70180:intron | 45.0% | |
| TCCAGGACTGAACATTTGGA+AGG | + | chr4.1:7940419-7940438 | None:intergenic | 45.0% | |
| TCTTTCTAAATCGAGGGAGG+GGG | - | chr4.1:7939706-7939725 | MS.gene70180:intron | 45.0% | |
| TGGGGTGATGCGAAAATTGA+TGG | - | chr4.1:7937448-7937467 | MS.gene70180:intron | 45.0% | |
| TGTTCTCCAATGGCAATGAC+AGG | + | chr4.1:7940744-7940763 | None:intergenic | 45.0% | |
| ! | GCCTTAATATTTTCCGGCTG+TGG | - | chr4.1:7941115-7941134 | MS.gene70180:intron | 45.0% |
| ! | GTTTTCGTCAATGGCAAACC+CGG | + | chr4.1:7936639-7936658 | None:intergenic | 45.0% |
| ! | TGTAGTGGAATTTGGGACTG+CGG | + | chr4.1:7940567-7940586 | None:intergenic | 45.0% |
| ! | TTTCTGGTGTGATCCTGCAA+TGG | + | chr4.1:7940032-7940051 | None:intergenic | 45.0% |
| !! | GACCTTGTCACTTTAAGGGA+AGG | + | chr4.1:7939797-7939816 | None:intergenic | 45.0% |
| !! | GTTGTTACTGGTGTTGCTTC+TGG | - | chr4.1:7936566-7936585 | MS.gene70180:CDS | 45.0% |
| !! | TGTGTTTTAGATCAGCGAGG+AGG | - | chr4.1:7937901-7937920 | MS.gene70180:intron | 45.0% |
| AAAAGTCTGCATCAAGCCCG+AGG | + | chr4.1:7939686-7939705 | None:intergenic | 50.0% | |
| AAGCGTGACAAAGGAACCTC+GGG | - | chr4.1:7939667-7939686 | MS.gene70180:intron | 50.0% | |
| AATTGCAACTGCTGCTGCTG+AGG | + | chr4.1:7936276-7936295 | None:intergenic | 50.0% | |
| ACACATTCTCCCTCATGTCC+AGG | + | chr4.1:7940436-7940455 | None:intergenic | 50.0% | |
| CAGACGGCCTGATACAAACT+TGG | - | chr4.1:7939845-7939864 | MS.gene70180:intron | 50.0% | |
| CTTACAGCTGACCATCCATC+AGG | + | chr4.1:7937011-7937030 | None:intergenic | 50.0% | |
| GAAGCGTGACAAAGGAACCT+CGG | - | chr4.1:7939666-7939685 | MS.gene70180:intron | 50.0% | |
| GTGCAGCTTCTTCTTCCTGT+AGG | + | chr4.1:7941599-7941618 | None:intergenic | 50.0% | |
| TAACCTTCCGTTGGAGTGTG+TGG | - | chr4.1:7936800-7936819 | MS.gene70180:intron | 50.0% | |
| TACTGTTACACAGCACGTGG+CGG | - | chr4.1:7938083-7938102 | MS.gene70180:intron | 50.0% | |
| TATAGGAGAATTGGCGCAGG+AGG | + | chr4.1:7940606-7940625 | None:intergenic | 50.0% | |
| TCCTGATGATATGCCGTTGC+CGG | - | chr4.1:7936604-7936623 | MS.gene70180:CDS | 50.0% | |
| TCTATGGCGTCAATGACAGC+AGG | + | chr4.1:7941307-7941326 | None:intergenic | 50.0% | |
| TGGTGCGGTAATACAGACCA+AGG | + | chr4.1:7939444-7939463 | None:intergenic | 50.0% | |
| TGTCATTGACGCCATAGACG+AGG | - | chr4.1:7941309-7941328 | MS.gene70180:CDS | 50.0% | |
| TTCCGTTGGAGTGTGTGGTT+CGG | - | chr4.1:7936805-7936824 | MS.gene70180:intron | 50.0% | |
| ! | AGGTACTGTTACACAGCACG+TGG | - | chr4.1:7938080-7938099 | MS.gene70180:intron | 50.0% |
| ! | TGAAGAGCACACCTGATGGA+TGG | - | chr4.1:7936997-7937016 | MS.gene70180:intron | 50.0% |
| ACACACGCACACATTCTCCC+AGG | + | chr4.1:7940444-7940463 | None:intergenic | 55.0% | |
| ATTGGCGCAGGAGGAAAGGT+TGG | + | chr4.1:7940597-7940616 | None:intergenic | 55.0% | |
| CTCCGAACCACACACTCCAA+CGG | + | chr4.1:7936810-7936829 | None:intergenic | 55.0% | |
| GAACCACACACTCCAACGGA+AGG | + | chr4.1:7936806-7936825 | None:intergenic | 55.0% | |
| GAGAATTGGCGCAGGAGGAA+AGG | + | chr4.1:7940601-7940620 | None:intergenic | 55.0% | |
| GGACAGATGGGAGCAGAGAA+TGG | + | chr4.1:7940653-7940672 | None:intergenic | 55.0% | |
| GGGGTGCAATGAGGACAGAT+GGG | + | chr4.1:7940665-7940684 | None:intergenic | 55.0% | |
| TCCGGCAACGGCATATCATC+AGG | + | chr4.1:7936608-7936627 | None:intergenic | 55.0% | |
| TCGTCAATGGCAAACCCGGT+GGG | + | chr4.1:7936635-7936654 | None:intergenic | 55.0% | |
| TTCGTCAATGGCAAACCCGG+TGG | + | chr4.1:7936636-7936655 | None:intergenic | 55.0% | |
| TTTGTATCAGGCCGTCTGCG+AGG | + | chr4.1:7939843-7939862 | None:intergenic | 55.0% | |
| ! | CTGAGTTGACACCTCGCAGA+CGG | - | chr4.1:7939829-7939848 | MS.gene70180:intron | 55.0% |
| ! | GTGGATGGCTTGCCAAGTGA+TGG | - | chr4.1:7939159-7939178 | MS.gene70180:intron | 55.0% |
| ! | TCTGCGAGGTGTCAACTCAG+TGG | + | chr4.1:7939829-7939848 | None:intergenic | 55.0% |
| CGGGGTGCAATGAGGACAGA+TGG | + | chr4.1:7940666-7940685 | None:intergenic | 60.0% | |
| GTTGGAACGCATGCCACAGC+CGG | + | chr4.1:7941131-7941150 | None:intergenic | 60.0% | |
| TCAATGGCAAACCCGGTGGG+AGG | + | chr4.1:7936632-7936651 | None:intergenic | 60.0% | |
| ! | GCGCAGGAGGAAAGGTTGGT+AGG | + | chr4.1:7940593-7940612 | None:intergenic | 60.0% |
| GAGGGAGTCGGGGTGCAATG+AGG | + | chr4.1:7940674-7940693 | None:intergenic | 65.0% | |
| GCAAACCCGGTGGGAGGTTC+CGG | + | chr4.1:7936626-7936645 | None:intergenic | 65.0% | |
| CCGGTGGGAGGTTCCGGCAA+CGG | + | chr4.1:7936620-7936639 | None:intergenic | 70.0% | |
| CCGTTGCCGGAACCTCCCAC+CGG | - | chr4.1:7936617-7936636 | MS.gene70180:intron | 70.0% | |
| CGTTGCCGGAACCTCCCACC+GGG | - | chr4.1:7936618-7936637 | MS.gene70180:intron | 70.0% | |
| GCGAGCGCATACGCTGCAGC+AGG | + | chr4.1:7937944-7937963 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7936257 | 7941659 | 7936257 | ID=MS.gene70180 |
| chr4.1 | mRNA | 7936257 | 7941659 | 7936257 | ID=MS.gene70180.t1;Parent=MS.gene70180 |
| chr4.1 | exon | 7941527 | 7941659 | 7941527 | ID=MS.gene70180.t1.exon1;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7941527 | 7941659 | 7941527 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7941216 | 7941436 | 7941216 | ID=MS.gene70180.t1.exon2;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7941216 | 7941436 | 7941216 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7941033 | 7941130 | 7941033 | ID=MS.gene70180.t1.exon3;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7941033 | 7941130 | 7941033 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7940891 | 7940933 | 7940891 | ID=MS.gene70180.t1.exon4;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7940891 | 7940933 | 7940891 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7939923 | 7940005 | 7939923 | ID=MS.gene70180.t1.exon5;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7939923 | 7940005 | 7939923 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7939770 | 7939834 | 7939770 | ID=MS.gene70180.t1.exon6;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7939770 | 7939834 | 7939770 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7938710 | 7938771 | 7938710 | ID=MS.gene70180.t1.exon7;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7938710 | 7938771 | 7938710 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7937930 | 7937989 | 7937930 | ID=MS.gene70180.t1.exon8;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7937930 | 7937989 | 7937930 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7936977 | 7937009 | 7936977 | ID=MS.gene70180.t1.exon9;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7936977 | 7937009 | 7936977 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7936562 | 7936627 | 7936562 | ID=MS.gene70180.t1.exon10;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7936562 | 7936627 | 7936562 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| chr4.1 | exon | 7936257 | 7936313 | 7936257 | ID=MS.gene70180.t1.exon11;Parent=MS.gene70180.t1 |
| chr4.1 | CDS | 7936257 | 7936313 | 7936257 | ID=cds.MS.gene70180.t1;Parent=MS.gene70180.t1 |
| Gene Sequence |
| Protein sequence |
