AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056692


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056692.t1 MTR_4g069800 94.891 274 10 1 1 270 1 274 0.0 538
MS.gene056692.t1 MTR_4g069800 83.212 274 10 2 1 270 1 242 1.99e-165 458
MS.gene056692.t1 MTR_4g069800 94.298 228 9 1 1 224 1 228 6.83e-161 446
MS.gene056692.t1 MTR_7g109610 47.929 169 88 0 98 266 111 279 4.14e-51 169
MS.gene056692.t1 MTR_1g086940 46.746 169 90 0 98 266 114 282 4.71e-49 164
MS.gene056692.t1 MTR_5g026840 34.457 267 142 5 20 269 12 262 2.16e-47 160
MS.gene056692.t1 MTR_7g082980 43.103 174 99 0 94 267 78 251 1.46e-45 155
MS.gene056692.t1 MTR_4g075100 40.000 175 105 0 93 267 43 217 1.11e-43 148
MS.gene056692.t1 MTR_4g034690 35.838 173 110 1 94 265 21 193 6.71e-35 124
MS.gene056692.t1 MTR_0002s0730 35.260 173 111 1 94 265 21 193 3.24e-34 123
MS.gene056692.t1 MTR_4g102000 33.333 183 118 1 89 267 120 302 6.62e-32 120
MS.gene056692.t1 MTR_4g099360 33.333 183 114 1 95 269 104 286 4.04e-24 99.0
MS.gene056692.t1 MTR_7g112640 33.908 174 104 3 104 266 119 292 3.47e-23 96.7
MS.gene056692.t1 MTR_1g106550 26.630 184 125 2 95 268 155 338 3.66e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056692.t1 AT1G11750 70.270 259 67 2 12 270 23 271 3.56e-134 380
MS.gene056692.t1 AT1G11750 67.279 272 71 2 12 270 23 289 2.62e-132 376
MS.gene056692.t1 AT1G02560 46.154 169 91 0 98 266 117 285 2.61e-48 162
MS.gene056692.t1 AT1G66670 43.103 174 99 0 94 267 84 257 2.19e-45 155
MS.gene056692.t1 AT5G45390 37.853 177 110 0 91 267 75 251 5.02e-43 148
MS.gene056692.t1 AT5G23140 40.000 175 105 0 93 267 46 220 1.20e-42 146
MS.gene056692.t1 AT1G12410 35.632 174 112 0 94 267 88 261 1.54e-34 126
MS.gene056692.t1 ATCG00670 32.948 173 115 1 94 265 21 193 1.11e-32 119
MS.gene056692.t1 AT4G17040 32.787 183 115 1 95 269 105 287 1.23e-31 119
MS.gene056692.t1 AT1G09130 35.519 183 107 3 95 266 121 303 2.11e-29 114
MS.gene056692.t1 AT1G09130 35.519 183 107 3 95 266 121 303 2.11e-29 114
MS.gene056692.t1 AT1G09130 35.519 183 107 3 95 266 121 303 5.20e-29 113
MS.gene056692.t1 AT1G49970 27.027 185 125 2 95 269 171 355 4.15e-17 80.5

Find 71 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTCAGGCTTTGGAGTT+TGG 0.250950 4.3:+35772607 MS.gene056692:intron
AATCAACCACAATGTGGATA+TGG 0.278581 4.3:+35770072 MS.gene056692:CDS
TTGGAGTTTGGTCTTATTGA+TGG 0.304151 4.3:+35772619 MS.gene056692:CDS
GTCATGATAGCTGGTGTTAT+TGG 0.353594 4.3:-35769471 None:intergenic
ATGGTGAAGGTGGGAGTTGC+AGG 0.355066 4.3:-35768168 None:intergenic
TGATCCAGATGCAGATATAA+TGG 0.359251 4.3:+35769617 MS.gene056692:CDS
CCCTGGTGGAAGCACTTATT+CGG 0.393075 4.3:+35769747 MS.gene056692:CDS
AGATTCAATACTCTGTTTCC+AGG 0.396606 4.3:-35772645 None:intergenic
CAAGGAACACTTCTCCTTGC+CGG 0.401602 4.3:+35770000 MS.gene056692:CDS
TTCATCATAATGCGAGCATT+TGG 0.412758 4.3:-35770051 None:intergenic
AAACATACTGTACCAACCTT+TGG 0.421332 4.3:-35769961 None:intergenic
CAATTTATGATTGCATGTCT+TGG 0.426577 4.3:+35769776 MS.gene056692:CDS
CAAACCATTATATCTGCATC+TGG 0.434951 4.3:-35769621 None:intergenic
ATCAACCACAATGTGGATAT+GGG 0.440932 4.3:+35770073 MS.gene056692:CDS
TGAGCCACTTGTGAGTTAAC+TGG 0.446998 4.3:-35769558 None:intergenic
TATTGGCGGGTTCCCCGTCT+TGG 0.448456 4.3:-35769454 None:intergenic
TCTCCTTGCCGGTGGGGAGA+AGG 0.458468 4.3:+35770011 MS.gene056692:CDS
TCTTCCTTGCAAAGCCCCTA+TGG 0.461392 4.3:+35768335 MS.gene056692:CDS
TATGGTAGTTCTTCTCAAAT+CGG 0.473212 4.3:+35768353 MS.gene056692:CDS
AGGAATCGTATAATATTCAT+AGG 0.474892 4.3:+35769531 MS.gene056692:CDS
TATATCGCAGCTTGTGACTC+TGG 0.483356 4.3:+35769587 MS.gene056692:CDS
AATTTATGATTGCATGTCTT+GGG 0.491253 4.3:+35769777 MS.gene056692:CDS
AAGATGTTCAGTGCTTTCAC+TGG 0.493292 4.3:+35771479 MS.gene056692:CDS
ATGATAGCTGGTGTTATTGG+CGG 0.494864 4.3:-35769468 None:intergenic
CTCCTTGCCGGTGGGGAGAA+GGG 0.497877 4.3:+35770012 MS.gene056692:CDS
CGGCAAGGAGAAGTGTTCCT+TGG 0.498121 4.3:-35769999 None:intergenic
TGATAGCTGGTGTTATTGGC+GGG 0.501907 4.3:-35769467 None:intergenic
AAGGTTGGTACAGTATGTTT+CGG 0.503063 4.3:+35769964 MS.gene056692:CDS
ACACCAGCTATCATGACTCC+TGG 0.503870 4.3:+35769477 MS.gene056692:CDS
TGGTCTTATTGATGGTGTCC+TGG 0.508407 4.3:+35772627 MS.gene056692:CDS
ACCGAATAAGTGCTTCCACC+AGG 0.511860 4.3:-35769748 None:intergenic
GAGAGATCAAGAGCTCCTCC+AGG 0.521114 4.3:-35769495 None:intergenic
CCTCCAGGAGTCATGATAGC+TGG 0.521187 4.3:-35769480 None:intergenic
TTCCCTTCTCCCCACCGGCA+AGG 0.541555 4.3:-35770014 None:intergenic
TGAGAAAACGTAAGTTGAGA+AGG 0.541998 4.3:-35768210 None:intergenic
CGGTGTAATTGAAGCCAAGA+CGG 0.544571 4.3:+35769440 MS.gene056692:CDS
GGTGTAATTGAAGCCAAGAC+GGG 0.551793 4.3:+35769441 MS.gene056692:CDS
TTTCAGATAAAGCCAAAGGT+TGG 0.559455 4.3:+35769949 MS.gene056692:intron
GCGCATTCCCTTCTCCCCAC+CGG 0.570395 4.3:-35770019 None:intergenic
CTTACCCCATATCCACATTG+TGG 0.574250 4.3:-35770078 None:intergenic
GATTTGAGAAGAACTACCAT+AGG 0.577205 4.3:-35768351 None:intergenic
GATTCTTCTGTGAGAAGCGA+TGG 0.577304 4.3:-35768187 None:intergenic
ATTTGAGAAGAACTACCATA+GGG 0.578078 4.3:-35768350 None:intergenic
GAACACTTCTCCTTGCCGGT+GGG 0.588591 4.3:+35770004 MS.gene056692:CDS
CACTGGACAGACATTAGAGA+AGG 0.591851 4.3:+35771496 MS.gene056692:CDS
AACACTTCTCCTTGCCGGTG+GGG 0.597362 4.3:+35770005 MS.gene056692:CDS
GGAAGAAAGACTAACATGGC+GGG 0.597387 4.3:-35770789 None:intergenic
GGCTTATCAAGTAAAACCCA+TGG 0.598446 4.3:+35768765 MS.gene056692:intron
CAGATGTATATAAATTGCCC+TGG 0.599214 4.3:+35769730 MS.gene056692:intron
GGAACACTTCTCCTTGCCGG+TGG 0.600384 4.3:+35770003 MS.gene056692:CDS
GTACACATGATGTTGGTACA+AGG 0.602280 4.3:+35768814 MS.gene056692:CDS
GAGAAAACGTAAGTTGAGAA+GGG 0.606921 4.3:-35768209 None:intergenic
GTGAGAAGCGATGGTGAAGG+TGG 0.617082 4.3:-35768178 None:intergenic
AAGGAAGAAGATATCGTGCA+AGG 0.618347 4.3:-35768320 None:intergenic
AGGAAGAAGATATCGTGCAA+GGG 0.624121 4.3:-35768319 None:intergenic
TCAACCACAATGTGGATATG+GGG 0.624507 4.3:+35770074 MS.gene056692:CDS
ATGTATATAAATTGCCCTGG+TGG 0.625092 4.3:+35769733 MS.gene056692:CDS
TTCGGAGTAGCTGCAAGCCA+AGG 0.633505 4.3:+35769982 MS.gene056692:CDS
GAGAAAAGTACACATGATGT+TGG 0.647062 4.3:+35768807 MS.gene056692:CDS
CCGAATAAGTGCTTCCACCA+GGG 0.650767 4.3:-35769747 None:intergenic
GGTGCAAGAGTACACAGAGA+GGG 0.660689 4.3:+35771517 MS.gene056692:CDS
AGGTGCAAGAGTACACAGAG+AGG 0.664297 4.3:+35771516 MS.gene056692:CDS
ACTACCATAGGGGCTTTGCA+AGG 0.666249 4.3:-35768339 None:intergenic
ACAGCCAGTTAACTCACAAG+TGG 0.670821 4.3:+35769554 MS.gene056692:CDS
GTGTAATTGAAGCCAAGACG+GGG 0.677616 4.3:+35769442 MS.gene056692:CDS
CTGACTGCAGGGTCATGTTG+AGG 0.678728 4.3:+35770733 MS.gene056692:intron
TGAGAAGCGATGGTGAAGGT+GGG 0.692078 4.3:-35768177 None:intergenic
ATGATGAATCAACCACAATG+TGG 0.708739 4.3:+35770066 MS.gene056692:CDS
CCAGCTATCATGACTCCTGG+AGG 0.717326 4.3:+35769480 MS.gene056692:CDS
TCTGTGAGAAGCGATGGTGA+AGG 0.733173 4.3:-35768181 None:intergenic
TTTGAGAAGAACTACCATAG+GGG 0.735308 4.3:-35768349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAAATATATCAATTTA+GGG + chr4.3:35768521-35768540 MS.gene056692:intron 10.0%
!! TATAAGAAATATATCAATTT+AGG + chr4.3:35768520-35768539 MS.gene056692:intron 10.0%
!! TGATAAATTTATATACTTTA+GGG + chr4.3:35768583-35768602 MS.gene056692:intron 10.0%
!! TTGATAAATTTATATACTTT+AGG + chr4.3:35768582-35768601 MS.gene056692:intron 10.0%
!!! AATTGAATTATTTTGTAAAT+GGG + chr4.3:35769266-35769285 MS.gene056692:intron 10.0%
!!! ATCAAAGTTTTTATATATAT+TGG + chr4.3:35771763-35771782 MS.gene056692:intron 10.0%
!! TATGATAATTGATAAAAAGT+GGG - chr4.3:35770238-35770257 None:intergenic 15.0%
!! TCATAATAAGTAGTTAAATA+CGG + chr4.3:35770253-35770272 MS.gene056692:intron 15.0%
!! TTATGATAATTGATAAAAAG+TGG - chr4.3:35770239-35770258 None:intergenic 15.0%
!!! ATTTGTTTTGTTATTTACTT+TGG + chr4.3:35772033-35772052 MS.gene056692:intron 15.0%
!!! GAATTGAATTATTTTGTAAA+TGG + chr4.3:35769265-35769284 MS.gene056692:intron 15.0%
!!! TTTTAAGTATTAATGAATGA+AGG + chr4.3:35769383-35769402 MS.gene056692:intron 15.0%
!! AAAAACATTGACAACTATTA+AGG - chr4.3:35769899-35769918 None:intergenic 20.0%
!! AAAACAAAAACTCATTCATT+TGG - chr4.3:35768443-35768462 None:intergenic 20.0%
!! AAACAAAAACTCATTCATTT+GGG - chr4.3:35768442-35768461 None:intergenic 20.0%
!! AAATAGTAGACAAAGAAAAT+TGG - chr4.3:35768395-35768414 None:intergenic 20.0%
!! AACTGAATTAACTATCAATT+TGG - chr4.3:35768672-35768691 None:intergenic 20.0%
!! AATACATATTATTATGTGAG+TGG + chr4.3:35771950-35771969 MS.gene056692:intron 20.0%
!! ATAGATATACTAAATAACGA+AGG + chr4.3:35770565-35770584 MS.gene056692:intron 20.0%
!! ATATGATAAGAACTAACAAT+GGG - chr4.3:35772009-35772028 None:intergenic 20.0%
!! CAAAGAAAATTGGATAAAAT+TGG - chr4.3:35768385-35768404 None:intergenic 20.0%
!! TAGTCAAAAGTCAAATAATA+GGG - chr4.3:35769665-35769684 None:intergenic 20.0%
!! TTAGTCAAAAGTCAAATAAT+AGG - chr4.3:35769666-35769685 None:intergenic 20.0%
!! TTTATATATATTGGAGAGTT+GGG + chr4.3:35771772-35771791 MS.gene056692:intron 20.0%
!!! AAATTTTTAGCAGTAAAACA+AGG - chr4.3:35772556-35772575 None:intergenic 20.0%
!!! AAGCTTTTGAAATTTTGTTA+TGG + chr4.3:35770105-35770124 MS.gene056692:intron 20.0%
!!! ATTTTCAATATATGTGAAAC+TGG + chr4.3:35771276-35771295 MS.gene056692:intron 20.0%
!!! GACATAACCTTTTAATTTTT+GGG + chr4.3:35770416-35770435 MS.gene056692:intron 20.0%
!!! GGAATATCTATAAGTTTTAT+TGG + chr4.3:35770451-35770470 MS.gene056692:intron 20.0%
!!! TTTTACATAAAAAAGAGCTA+TGG + chr4.3:35770603-35770622 MS.gene056692:intron 20.0%
!!! TTTTAGTATTTGTTAGTGAT+TGG + chr4.3:35768474-35768493 MS.gene056692:intron 20.0%
!!! TTTTATATATATTGGAGAGT+TGG + chr4.3:35771771-35771790 MS.gene056692:intron 20.0%
! AACAAAAACTCATTCATTTG+GGG - chr4.3:35768441-35768460 None:intergenic 25.0%
! AACTAGTCCCAAAAATTAAA+AGG - chr4.3:35770426-35770445 None:intergenic 25.0%
! AACTCAAACTATTGAACAAT+CGG - chr4.3:35771069-35771088 None:intergenic 25.0%
! AACTTCTATTAACAAGATTG+GGG - chr4.3:35771098-35771117 None:intergenic 25.0%
! AATATCTGGATTTAGAAATG+AGG + chr4.3:35772478-35772497 MS.gene056692:intron 25.0%
! AATTTATGATTGCATGTCTT+GGG + chr4.3:35769777-35769796 MS.gene056692:CDS 25.0%
! ACAAACTTCTATAAAACTAG+AGG + chr4.3:35770344-35770363 MS.gene056692:intron 25.0%
! ACATAAGAACTCTTTACAAA+AGG - chr4.3:35771921-35771940 None:intergenic 25.0%
! AGGAATCGTATAATATTCAT+AGG + chr4.3:35769531-35769550 MS.gene056692:CDS 25.0%
! ATAAGTCTCAAATTTGATTG+TGG + chr4.3:35772420-35772439 MS.gene056692:intron 25.0%
! ATAGAAGTTTGTAAACTGTA+GGG - chr4.3:35770336-35770355 None:intergenic 25.0%
! ATATCTGGATTTAGAAATGA+GGG + chr4.3:35772479-35772498 MS.gene056692:intron 25.0%
! ATCCTATATTTAGAAATGAG+AGG - chr4.3:35772259-35772278 None:intergenic 25.0%
! ATCCTCTCATTTCTAAATAT+AGG + chr4.3:35772254-35772273 MS.gene056692:intron 25.0%
! ATTACACATTTATGCAGTTT+AGG + chr4.3:35768613-35768632 MS.gene056692:intron 25.0%
! CAACTTCTATTAACAAGATT+GGG - chr4.3:35771099-35771118 None:intergenic 25.0%
! CATAAGAACTCTTTACAAAA+GGG - chr4.3:35771920-35771939 None:intergenic 25.0%
! GAAGTTTAGTACATTAGTAT+AGG + chr4.3:35772060-35772079 MS.gene056692:intron 25.0%
! GATATGATAAGAACTAACAA+TGG - chr4.3:35772010-35772029 None:intergenic 25.0%
! GGATAATAACAATGACAATA+TGG + chr4.3:35770205-35770224 MS.gene056692:intron 25.0%
! GTATAATGTGTTTGTTTAGT+AGG + chr4.3:35768886-35768905 MS.gene056692:intron 25.0%
! GTCAATTTATGAGATGTAAT+TGG - chr4.3:35769194-35769213 None:intergenic 25.0%
! TAAAGAGTTCTTATGTTGTT+TGG + chr4.3:35771925-35771944 MS.gene056692:intron 25.0%
! TAAGTCTCAAATTTGATTGT+GGG + chr4.3:35772421-35772440 MS.gene056692:intron 25.0%
! TATAGAAGTTTGTAAACTGT+AGG - chr4.3:35770337-35770356 None:intergenic 25.0%
! TCAACTTCTATTAACAAGAT+TGG - chr4.3:35771100-35771119 None:intergenic 25.0%
! TCTTGAACTTTGATACTTTA+AGG + chr4.3:35769322-35769341 MS.gene056692:intron 25.0%
! TTACACATTTATGCAGTTTA+GGG + chr4.3:35768614-35768633 MS.gene056692:intron 25.0%
! TTATATATATTGGAGAGTTG+GGG + chr4.3:35771773-35771792 MS.gene056692:intron 25.0%
! TTATGATCTTAATAGTTGTC+TGG + chr4.3:35772184-35772203 MS.gene056692:intron 25.0%
! TTGAAAAAATGGACAATACT+AGG - chr4.3:35768925-35768944 None:intergenic 25.0%
! TTGTTAGAAAGAGAATATTC+TGG - chr4.3:35771638-35771657 None:intergenic 25.0%
!! AAAGAGTTCTTATGTTGTTT+GGG + chr4.3:35771926-35771945 MS.gene056692:intron 25.0%
!! ATGCACTTTAGATTTTATGA+TGG + chr4.3:35770131-35770150 MS.gene056692:intron 25.0%
!! GTAAGGGTATATAAGTAATT+AGG + chr4.3:35768992-35769011 MS.gene056692:intron 25.0%
!! TATTTTACTCATATGCTAGA+TGG - chr4.3:35770285-35770304 None:intergenic 25.0%
!!! ACTTTTGACTAATCTTACAA+TGG + chr4.3:35769674-35769693 MS.gene056692:intron 25.0%
!!! CAAGTTTTAGTTAAAAGAGA+CGG - chr4.3:35772228-35772247 None:intergenic 25.0%
!!! GGACATAACCTTTTAATTTT+TGG + chr4.3:35770415-35770434 MS.gene056692:intron 25.0%
!!! TAGTATTGTCCATTTTTTCA+AGG + chr4.3:35768924-35768943 MS.gene056692:intron 25.0%
AAAACAGACAAATGGACAAA+TGG - chr4.3:35772109-35772128 None:intergenic 30.0%
AAACATGAGGACTAAATATC+TGG + chr4.3:35772464-35772483 MS.gene056692:intron 30.0%
AAGTCTCAAATTTGATTGTG+GGG + chr4.3:35772422-35772441 MS.gene056692:intron 30.0%
AATTGATAAAAAGTGGGACT+GGG - chr4.3:35770232-35770251 None:intergenic 30.0%
ACAGAAAATGATAAACCTGA+TGG - chr4.3:35771874-35771893 None:intergenic 30.0%
ACGTAACAATGTGATATGTA+GGG + chr4.3:35769212-35769231 MS.gene056692:intron 30.0%
ATAGAATGCACTATGTAGTT+TGG + chr4.3:35770532-35770551 MS.gene056692:intron 30.0%
ATAGTTTATCTGACAGTTCT+TGG + chr4.3:35771399-35771418 MS.gene056692:intron 30.0%
ATGCAGTTTAGGGATTAAAT+TGG + chr4.3:35768624-35768643 MS.gene056692:intron 30.0%
ATTTGAGAAGAACTACCATA+GGG - chr4.3:35768353-35768372 None:intergenic 30.0%
CAATTTATGATTGCATGTCT+TGG + chr4.3:35769776-35769795 MS.gene056692:CDS 30.0%
CAGAAAATGATAAACCTGAT+GGG - chr4.3:35771873-35771892 None:intergenic 30.0%
CTCAATAGAAAACAGACAAA+TGG - chr4.3:35772117-35772136 None:intergenic 30.0%
GAACAATAGATACATGACTT+TGG + chr4.3:35771006-35771025 MS.gene056692:intron 30.0%
GCTTTATCTGAAAACAAATG+TGG - chr4.3:35769942-35769961 None:intergenic 30.0%
GGAATTAAAGTAGCTAACAA+AGG - chr4.3:35769878-35769897 None:intergenic 30.0%
TAAAAATCATGCAACTTCAG+TGG - chr4.3:35770813-35770832 None:intergenic 30.0%
TAAAGCATGTTATGACATGT+AGG + chr4.3:35768727-35768746 MS.gene056692:intron 30.0%
TAATTGATAAAAAGTGGGAC+TGG - chr4.3:35770233-35770252 None:intergenic 30.0%
TACTGGGAAAATAAGTGTAA+GGG + chr4.3:35768976-35768995 MS.gene056692:intron 30.0%
TATATATATTGGAGAGTTGG+GGG + chr4.3:35771774-35771793 MS.gene056692:intron 30.0%
TATCTGGATTTAGAAATGAG+GGG + chr4.3:35772480-35772499 MS.gene056692:intron 30.0%
TATGGTAGTTCTTCTCAAAT+CGG + chr4.3:35768353-35768372 MS.gene056692:CDS 30.0%
TTACAAAAGGGTTGTAGAAA+TGG - chr4.3:35771908-35771927 None:intergenic 30.0%
TTTCCATAGACTACATAGAT+AGG - chr4.3:35769101-35769120 None:intergenic 30.0%
TTTCTGTACTCCAAAAAGAA+GGG - chr4.3:35771453-35771472 None:intergenic 30.0%
! AGAAAAAGACGATACTGATT+TGG + chr4.3:35770172-35770191 MS.gene056692:intron 30.0%
! CTGCTAAAAATTTTCTTACC+CGG + chr4.3:35772563-35772582 MS.gene056692:intron 30.0%
! GTAATTAGGTTGTAAAGTAG+TGG + chr4.3:35769006-35769025 MS.gene056692:intron 30.0%
! TAAAAAAGAGCTATGGACTA+TGG + chr4.3:35770610-35770629 MS.gene056692:intron 30.0%
! TTATGTGATGTGAAGTGTTT+CGG + chr4.3:35770670-35770689 MS.gene056692:intron 30.0%
! TTGTTATTAATCTGACTGCA+GGG + chr4.3:35770722-35770741 MS.gene056692:intron 30.0%
! TTGTTTTCAGATAAAGCCAA+AGG + chr4.3:35769945-35769964 MS.gene056692:intron 30.0%
! TTTCAGTTTGCTTGTAGTTA+CGG + chr4.3:35769420-35769439 MS.gene056692:intron 30.0%
! TTTTCTGTACTCCAAAAAGA+AGG - chr4.3:35771454-35771473 None:intergenic 30.0%
!! AATTTTCAGCATTGAGATTG+AGG + chr4.3:35770372-35770391 MS.gene056692:intron 30.0%
!! AGAATGGACTATTGGAAATT+TGG + chr4.3:35771226-35771245 MS.gene056692:intron 30.0%
!! ATAGAAGTTGAATTTTAGCG+CGG + chr4.3:35771109-35771128 MS.gene056692:intron 30.0%
!! TATGGACTATGGTGTATTTT+TGG + chr4.3:35770621-35770640 MS.gene056692:intron 30.0%
!! TTTGTTATTAATCTGACTGC+AGG + chr4.3:35770721-35770740 MS.gene056692:intron 30.0%
!!! AACTTAGTTTTGCTGAAAGT+AGG + chr4.3:35770865-35770884 MS.gene056692:intron 30.0%
!!! AAGTTTTAAGCGAAAACCAT+GGG - chr4.3:35768784-35768803 None:intergenic 30.0%
!!! GTTTTTACCTTGAAAGCATT+TGG + chr4.3:35769913-35769932 MS.gene056692:intron 30.0%
!!! TCTTTTTGGAGTACAGAAAA+TGG + chr4.3:35771454-35771473 MS.gene056692:intron 30.0%
!!! TTTTTTTGTGTGTGTGTGTA+AGG - chr4.3:35769833-35769852 None:intergenic 30.0%
AAACATACTGTACCAACCTT+TGG - chr4.3:35769964-35769983 None:intergenic 35.0%
AAATGATAAACCTGATGGGA+AGG - chr4.3:35771869-35771888 None:intergenic 35.0%
AACCCTTGAATGTATAGTGT+TGG + chr4.3:35770935-35770954 MS.gene056692:intron 35.0%
AAGCACTTGAAAGAGTAACA+AGG - chr4.3:35768857-35768876 None:intergenic 35.0%
AATCAACCACAATGTGGATA+TGG + chr4.3:35770072-35770091 MS.gene056692:CDS 35.0%
AATTGAGAGGAATATTGGGT+TGG + chr4.3:35771816-35771835 MS.gene056692:intron 35.0%
ACAAATGGACAAATGGCTAA+AGG - chr4.3:35772102-35772121 None:intergenic 35.0%
ACCCTTGAATGTATAGTGTT+GGG + chr4.3:35770936-35770955 MS.gene056692:intron 35.0%
ACTTCTCACACAAAGTCATT+TGG - chr4.3:35771171-35771190 None:intergenic 35.0%
AGAGGAAAAATCCTGAAACT+TGG - chr4.3:35772289-35772308 None:intergenic 35.0%
AGAGGCAGATACAAAAATAC+CGG - chr4.3:35772585-35772604 None:intergenic 35.0%
AGCACTTGAAAGAGTAACAA+GGG - chr4.3:35768856-35768875 None:intergenic 35.0%
AGTCATGTATCTATTGTTCC+AGG - chr4.3:35771005-35771024 None:intergenic 35.0%
AGTCTCAAATTTGATTGTGG+GGG + chr4.3:35772423-35772442 MS.gene056692:intron 35.0%
AGTGAAAGCGAAAGTTGAAA+TGG - chr4.3:35768260-35768279 None:intergenic 35.0%
ATATATATTGGAGAGTTGGG+GGG + chr4.3:35771775-35771794 MS.gene056692:intron 35.0%
ATCAACCACAATGTGGATAT+GGG + chr4.3:35770073-35770092 MS.gene056692:CDS 35.0%
ATGATGAATCAACCACAATG+TGG + chr4.3:35770066-35770085 MS.gene056692:CDS 35.0%
ATGTATATAAATTGCCCTGG+TGG + chr4.3:35769733-35769752 MS.gene056692:CDS 35.0%
ATTGAGAGGAATATTGGGTT+GGG + chr4.3:35771817-35771836 MS.gene056692:intron 35.0%
CAAACCATTATATCTGCATC+TGG - chr4.3:35769624-35769643 None:intergenic 35.0%
CAAATGGACAAATGGCTAAA+GGG - chr4.3:35772101-35772120 None:intergenic 35.0%
CAATTTAGGGACTGAATTGA+TGG + chr4.3:35768534-35768553 MS.gene056692:intron 35.0%
CAGATGTATATAAATTGCCC+TGG + chr4.3:35769730-35769749 MS.gene056692:intron 35.0%
CCAGAATTGAGAGGAATATT+GGG + chr4.3:35771812-35771831 MS.gene056692:intron 35.0%
CTTCTCACACAAAGTCATTT+GGG - chr4.3:35771170-35771189 None:intergenic 35.0%
GAAATGAGGGGAATAAAATC+CGG + chr4.3:35772492-35772511 MS.gene056692:intron 35.0%
GACGTAACAATGTGATATGT+AGG + chr4.3:35769211-35769230 MS.gene056692:intron 35.0%
GAGGAAAAATCCTGAAACTT+GGG - chr4.3:35772288-35772307 None:intergenic 35.0%
GATTTGAGAAGAACTACCAT+AGG - chr4.3:35768354-35768373 None:intergenic 35.0%
GGAAAAATAAGTCCCAAACT+GGG - chr4.3:35772315-35772334 None:intergenic 35.0%
GGAAAGAAAGTGATAGTTTG+AGG + chr4.3:35768645-35768664 MS.gene056692:intron 35.0%
GTACTGGGAAAATAAGTGTA+AGG + chr4.3:35768975-35768994 MS.gene056692:intron 35.0%
GTGAAAGCGAAAGTTGAAAT+GGG - chr4.3:35768259-35768278 None:intergenic 35.0%
TAAGTTAATGCGACTGAGAA+TGG + chr4.3:35771599-35771618 MS.gene056692:intron 35.0%
TCCCAACACTATACATTCAA+GGG - chr4.3:35770940-35770959 None:intergenic 35.0%
TCGGTTGAACCTTGAAAAAA+TGG - chr4.3:35768936-35768955 None:intergenic 35.0%
TGACCTATCTATGTAGTCTA+TGG + chr4.3:35769095-35769114 MS.gene056692:intron 35.0%
TGACTTTCTGTGATTGTACT+GGG + chr4.3:35768960-35768979 MS.gene056692:intron 35.0%
TGATCCAGATGCAGATATAA+TGG + chr4.3:35769617-35769636 MS.gene056692:CDS 35.0%
TGTTTCGGTCAATACTCAAT+AGG + chr4.3:35770685-35770704 MS.gene056692:intron 35.0%
TTCAGCAAAACTAAGTTCAC+AGG - chr4.3:35770862-35770881 None:intergenic 35.0%
TTCATCATAATGCGAGCATT+TGG - chr4.3:35770054-35770073 None:intergenic 35.0%
TTCTGTACTCCAAAAAGAAG+GGG - chr4.3:35771452-35771471 None:intergenic 35.0%
TTTCAGATAAAGCCAAAGGT+TGG + chr4.3:35769949-35769968 MS.gene056692:intron 35.0%
TTTCCAATAGTCCATTCTGT+TGG - chr4.3:35771224-35771243 None:intergenic 35.0%
TTTGAGAAGAACTACCATAG+GGG - chr4.3:35768352-35768371 None:intergenic 35.0%
! ATCCGGCTCTAGTTAAAAAT+AGG + chr4.3:35772509-35772528 MS.gene056692:intron 35.0%
! CTCATCAATGGTTTAAAACC+AGG - chr4.3:35771197-35771216 None:intergenic 35.0%
! CTTGTAACTTGTGAAACATG+AGG + chr4.3:35772451-35772470 MS.gene056692:intron 35.0%
! GAGAAAACGTAAGTTGAGAA+GGG - chr4.3:35768212-35768231 None:intergenic 35.0%
! GAGAAAAGTACACATGATGT+TGG + chr4.3:35768807-35768826 MS.gene056692:CDS 35.0%
! GGTCTATAAGCTGAATGTTT+TGG - chr4.3:35769046-35769065 None:intergenic 35.0%
! TCCGGCTCTAGTTAAAAATA+GGG + chr4.3:35772510-35772529 MS.gene056692:intron 35.0%
! TGAGAAAACGTAAGTTGAGA+AGG - chr4.3:35768213-35768232 None:intergenic 35.0%
!! AAGGTTGGTACAGTATGTTT+CGG + chr4.3:35769964-35769983 MS.gene056692:CDS 35.0%
!! ATCTCTCATCTGTTTTGTTC+AGG + chr4.3:35769511-35769530 MS.gene056692:CDS 35.0%
!! GAGACTTATTTTTCATGACG+TGG - chr4.3:35772409-35772428 None:intergenic 35.0%
!! TAGAAGTTGAATTTTAGCGC+GGG + chr4.3:35771110-35771129 MS.gene056692:intron 35.0%
!! TGTTCAATAGTTTGAGTTGC+CGG + chr4.3:35771071-35771090 MS.gene056692:intron 35.0%
!! TTGGAGTTTGGTCTTATTGA+TGG + chr4.3:35772619-35772638 MS.gene056692:CDS 35.0%
!! TTTACCTTGAAAGCATTTGG+TGG + chr4.3:35769916-35769935 MS.gene056692:intron 35.0%
!!! ATTTTTGGGACTAGTTGCAA+TGG + chr4.3:35770430-35770449 MS.gene056692:intron 35.0%
!!! CAAGTTTTAAGCGAAAACCA+TGG - chr4.3:35768785-35768804 None:intergenic 35.0%
!!! CAGTTTTCTTTCTGTTTCTG+AGG + chr4.3:35771541-35771560 MS.gene056692:CDS 35.0%
!!! CTATGGTGTATTTTTGGTTG+CGG + chr4.3:35770627-35770646 MS.gene056692:intron 35.0%
!!! TCCCTATTTTTAACTAGAGC+CGG - chr4.3:35772514-35772533 None:intergenic 35.0%
!!! TGTAGGTTTTTGTTTTACGC+AGG + chr4.3:35768744-35768763 MS.gene056692:intron 35.0%
AACATTCAGCTTATAGACCG+TGG + chr4.3:35769047-35769066 MS.gene056692:intron 40.0%
AAGATGTTCAGTGCTTTCAC+TGG + chr4.3:35771479-35771498 MS.gene056692:CDS 40.0%
AAGGAAGAAGATATCGTGCA+AGG - chr4.3:35768323-35768342 None:intergenic 40.0%
AATCACAGAAAGTCAGGCTT+CGG - chr4.3:35768955-35768974 None:intergenic 40.0%
AGGAAGAAGATATCGTGCAA+GGG - chr4.3:35768322-35768341 None:intergenic 40.0%
AGGTTATGTCCAATGCAACT+TGG - chr4.3:35770406-35770425 None:intergenic 40.0%
ATTCTAAATACGCCATGCCA+CGG - chr4.3:35769067-35769086 None:intergenic 40.0%
CAATAGTCCATTCTGTTGGA+TGG - chr4.3:35771220-35771239 None:intergenic 40.0%
CAGTACAATCACAGAAAGTC+AGG - chr4.3:35768961-35768980 None:intergenic 40.0%
CAGTGGAAGAAAGACTAACA+TGG - chr4.3:35770796-35770815 None:intergenic 40.0%
CCCAATATTCCTCTCAATTC+TGG - chr4.3:35771815-35771834 None:intergenic 40.0%
CTATTAACAAGATTGGGGAC+CGG - chr4.3:35771093-35771112 None:intergenic 40.0%
CTGACTTTCTGTGATTGTAC+TGG + chr4.3:35768959-35768978 MS.gene056692:intron 40.0%
GAAGTTTGTAAACTGTAGGG+AGG - chr4.3:35770333-35770352 None:intergenic 40.0%
GAGGCAGATACAAAAATACC+GGG - chr4.3:35772584-35772603 None:intergenic 40.0%
GCCAGAATTGAGAGGAATAT+TGG + chr4.3:35771811-35771830 MS.gene056692:intron 40.0%
GGCTTATCAAGTAAAACCCA+TGG + chr4.3:35768765-35768784 MS.gene056692:intron 40.0%
GGGAAAAATAAGTCCCAAAC+TGG - chr4.3:35772316-35772335 None:intergenic 40.0%
GTACACATGATGTTGGTACA+AGG + chr4.3:35768814-35768833 MS.gene056692:CDS 40.0%
GTCCCAACACTATACATTCA+AGG - chr4.3:35770941-35770960 None:intergenic 40.0%
TATCTGCCTCTTCTCATTTC+AGG + chr4.3:35772594-35772613 MS.gene056692:intron 40.0%
TCAACCACAATGTGGATATG+GGG + chr4.3:35770074-35770093 MS.gene056692:CDS 40.0%
TCCAGGTAAAGAATTCAACG+AGG - chr4.3:35770988-35771007 None:intergenic 40.0%
TCTGTACTCCAAAAAGAAGG+GGG - chr4.3:35771451-35771470 None:intergenic 40.0%
TCTTCATGCTCAAGTTACCA+TGG + chr4.3:35771319-35771338 MS.gene056692:intron 40.0%
TGGAAGAAAGACTAACATGG+CGG - chr4.3:35770793-35770812 None:intergenic 40.0%
TTTGTGTGTGTGTGTAAGGT+AGG - chr4.3:35769829-35769848 None:intergenic 40.0%
! ACTTAAAAGAGTGCAGAGAC+TGG - chr4.3:35769371-35769390 None:intergenic 40.0%
! CATTTGGGCTTTTAGCAAGA+TGG - chr4.3:35771155-35771174 None:intergenic 40.0%
! CTCAACTTACGTTTTCTCAC+AGG + chr4.3:35768214-35768233 MS.gene056692:intron 40.0%
! CTTAAAAGAGTGCAGAGACT+GGG - chr4.3:35769370-35769389 None:intergenic 40.0%
! TCCTAATTTGCACCAGAAGT+GGG - chr4.3:35772344-35772363 None:intergenic 40.0%
! TTAAAAGAGTGCAGAGACTG+GGG - chr4.3:35769369-35769388 None:intergenic 40.0%
! TTCCTAATTTGCACCAGAAG+TGG - chr4.3:35772345-35772364 None:intergenic 40.0%
! TTTTCCTCTCAACCCAGTTT+GGG + chr4.3:35772300-35772319 MS.gene056692:intron 40.0%
! TTTTTCCTCTCAACCCAGTT+TGG + chr4.3:35772299-35772318 MS.gene056692:intron 40.0%
!! AATATTGGGTTGGGTAAGTC+GGG + chr4.3:35771826-35771845 MS.gene056692:intron 40.0%
!! AGACGATACTGATTTGGTGT+AGG + chr4.3:35770178-35770197 MS.gene056692:intron 40.0%
!! ATGATAGCTGGTGTTATTGG+CGG - chr4.3:35769471-35769490 None:intergenic 40.0%
!! CATCCAACAGAATGGACTAT+TGG + chr4.3:35771218-35771237 MS.gene056692:intron 40.0%
!! GAATATTGGGTTGGGTAAGT+CGG + chr4.3:35771825-35771844 MS.gene056692:intron 40.0%
!! GTCATGATAGCTGGTGTTAT+TGG - chr4.3:35769474-35769493 None:intergenic 40.0%
!! TACTGATTTGGTGTAGGAAG+AGG + chr4.3:35770184-35770203 MS.gene056692:intron 40.0%
!! TCATTTCAGGCTTTGGAGTT+TGG + chr4.3:35772607-35772626 MS.gene056692:intron 40.0%
!!! GGGGTTTTAACTCATTTCAG+AGG - chr4.3:35769350-35769369 None:intergenic 40.0%
ACAGCCAGTTAACTCACAAG+TGG + chr4.3:35769554-35769573 MS.gene056692:CDS 45.0%
ACCCACTTCTGGTGCAAATT+AGG + chr4.3:35772340-35772359 MS.gene056692:intron 45.0%
AGGGGGAAGAAGAGGAAAAT+AGG - chr4.3:35771434-35771453 None:intergenic 45.0%
CAAAAAGAAGGGGGAAGAAG+AGG - chr4.3:35771442-35771461 None:intergenic 45.0%
CACTGGACAGACATTAGAGA+AGG + chr4.3:35771496-35771515 MS.gene056692:CDS 45.0%
CCAAAGCCTGAAATGAGAAG+AGG - chr4.3:35772603-35772622 None:intergenic 45.0%
CCTCTTCTCATTTCAGGCTT+TGG + chr4.3:35772600-35772619 MS.gene056692:intron 45.0%
CGGTGTAATTGAAGCCAAGA+CGG + chr4.3:35769440-35769459 MS.gene056692:CDS 45.0%
CTTACCCCATATCCACATTG+TGG - chr4.3:35770081-35770100 None:intergenic 45.0%
CTTTGTGTGAGAAGTTGTCC+TGG + chr4.3:35771176-35771195 MS.gene056692:intron 45.0%
GATTCTTCTGTGAGAAGCGA+TGG - chr4.3:35768190-35768209 None:intergenic 45.0%
GCCTCGTTGAATTCTTTACC+TGG + chr4.3:35770984-35771003 MS.gene056692:intron 45.0%
GGAAGAAAGACTAACATGGC+GGG - chr4.3:35770792-35770811 None:intergenic 45.0%
GGTGTAATTGAAGCCAAGAC+GGG + chr4.3:35769441-35769460 MS.gene056692:CDS 45.0%
GTGTAATTGAAGCCAAGACG+GGG + chr4.3:35769442-35769461 MS.gene056692:CDS 45.0%
GTGTGTGTGTAAGGTAGGAT+GGG - chr4.3:35769824-35769843 None:intergenic 45.0%
TATATCGCAGCTTGTGACTC+TGG + chr4.3:35769587-35769606 MS.gene056692:CDS 45.0%
TCTGTTGGATGGCTCATCAA+TGG - chr4.3:35771209-35771228 None:intergenic 45.0%
TGAGCCACTTGTGAGTTAAC+TGG - chr4.3:35769561-35769580 None:intergenic 45.0%
TGATGAGCCATCCAACAGAA+TGG + chr4.3:35771210-35771229 MS.gene056692:intron 45.0%
TGTGTGTGTAAGGTAGGATG+GGG - chr4.3:35769823-35769842 None:intergenic 45.0%
TGTGTGTGTGTAAGGTAGGA+TGG - chr4.3:35769825-35769844 None:intergenic 45.0%
! CTCTTCTTCCCCCTTCTTTT+TGG + chr4.3:35771440-35771459 MS.gene056692:intron 45.0%
! GGATTTTCGTCCCAAGTTTC+AGG + chr4.3:35772275-35772294 MS.gene056692:intron 45.0%
! GTCTGGCTTAAATGCACTTC+TGG + chr4.3:35772201-35772220 MS.gene056692:intron 45.0%
! TTTTCCCAACAACCCACTTC+TGG + chr4.3:35772329-35772348 MS.gene056692:intron 45.0%
!! ATATTGGGTTGGGTAAGTCG+GGG + chr4.3:35771827-35771846 MS.gene056692:intron 45.0%
!! TGATAGCTGGTGTTATTGGC+GGG - chr4.3:35769470-35769489 None:intergenic 45.0%
!! TGGTCTTATTGATGGTGTCC+TGG + chr4.3:35772627-35772646 MS.gene056692:CDS 45.0%
ACACCAGCTATCATGACTCC+TGG + chr4.3:35769477-35769496 MS.gene056692:CDS 50.0%
ACCGAATAAGTGCTTCCACC+AGG - chr4.3:35769751-35769770 None:intergenic 50.0%
ACTACCATAGGGGCTTTGCA+AGG - chr4.3:35768342-35768361 None:intergenic 50.0%
CAAGGAACACTTCTCCTTGC+CGG + chr4.3:35770000-35770019 MS.gene056692:CDS 50.0%
CCGAATAAGTGCTTCCACCA+GGG - chr4.3:35769750-35769769 None:intergenic 50.0%
CTGATGGGAAGGAACCTAGA+GGG - chr4.3:35771858-35771877 None:intergenic 50.0%
GCTGATGTGCCAAGTTGCAT+TGG + chr4.3:35770394-35770413 MS.gene056692:intron 50.0%
GTGGCCACCAAATGCTTTCA+AGG - chr4.3:35769923-35769942 None:intergenic 50.0%
TAACCAAGTAGCAGCTGCCA+TGG - chr4.3:35771339-35771358 None:intergenic 50.0%
TCAGCTTATAGACCGTGGCA+TGG + chr4.3:35769052-35769071 MS.gene056692:intron 50.0%
TCTGTGAGAAGCGATGGTGA+AGG - chr4.3:35768184-35768203 None:intergenic 50.0%
TCTTCCTTGCAAAGCCCCTA+TGG + chr4.3:35768335-35768354 MS.gene056692:CDS 50.0%
TGAGAAGCGATGGTGAAGGT+GGG - chr4.3:35768180-35768199 None:intergenic 50.0%
TTACCATGGCAGCTGCTACT+TGG + chr4.3:35771333-35771352 MS.gene056692:intron 50.0%
! AAGTCCCAAACTGGGTTGAG+AGG - chr4.3:35772307-35772326 None:intergenic 50.0%
! AGGTGCAAGAGTACACAGAG+AGG + chr4.3:35771516-35771535 MS.gene056692:CDS 50.0%
! GGTGCAAGAGTACACAGAGA+GGG + chr4.3:35771517-35771536 MS.gene056692:CDS 50.0%
!! AGTTGAATTTTAGCGCGGGC+AGG + chr4.3:35771114-35771133 MS.gene056692:intron 50.0%
!! CCCTGGTGGAAGCACTTATT+CGG + chr4.3:35769747-35769766 MS.gene056692:CDS 50.0%
!! TGCACCAGAAGTGGGTTGTT+GGG - chr4.3:35772336-35772355 None:intergenic 50.0%
!! TTGCACCAGAAGTGGGTTGT+TGG - chr4.3:35772337-35772356 None:intergenic 50.0%
AACACTTCTCCTTGCCGGTG+GGG + chr4.3:35770005-35770024 MS.gene056692:CDS 55.0%
ATGGTGAAGGTGGGAGTTGC+AGG - chr4.3:35768171-35768190 None:intergenic 55.0%
CCAGCTATCATGACTCCTGG+AGG + chr4.3:35769480-35769499 MS.gene056692:CDS 55.0%
CCTCCAGGAGTCATGATAGC+TGG - chr4.3:35769483-35769502 None:intergenic 55.0%
CCTCTAGGTTCCTTCCCATC+AGG + chr4.3:35771856-35771875 MS.gene056692:intron 55.0%
CCTGATGGGAAGGAACCTAG+AGG - chr4.3:35771859-35771878 None:intergenic 55.0%
CTGACTGCAGGGTCATGTTG+AGG + chr4.3:35770733-35770752 MS.gene056692:intron 55.0%
GAACACTTCTCCTTGCCGGT+GGG + chr4.3:35770004-35770023 MS.gene056692:CDS 55.0%
GAGAGATCAAGAGCTCCTCC+AGG - chr4.3:35769498-35769517 None:intergenic 55.0%
GGGGGTAAGCCAGAATTGAG+AGG + chr4.3:35771803-35771822 MS.gene056692:intron 55.0%
GTGAGAAGCGATGGTGAAGG+TGG - chr4.3:35768181-35768200 None:intergenic 55.0%
TTCGGAGTAGCTGCAAGCCA+AGG + chr4.3:35769982-35770001 MS.gene056692:CDS 55.0%
!! CGGCAAGGAGAAGTGTTCCT+TGG - chr4.3:35770002-35770021 None:intergenic 55.0%
GGAACACTTCTCCTTGCCGG+TGG + chr4.3:35770003-35770022 MS.gene056692:CDS 60.0%
TGGAGAGTTGGGGGGTCGAT+GGG + chr4.3:35771783-35771802 MS.gene056692:intron 60.0%
TTGGAGAGTTGGGGGGTCGA+TGG + chr4.3:35771782-35771801 MS.gene056692:intron 60.0%
!! TATTGGCGGGTTCCCCGTCT+TGG - chr4.3:35769457-35769476 None:intergenic 60.0%
AAGTCGGGGCAAGGCCCTCT+AGG + chr4.3:35771841-35771860 MS.gene056692:intron 65.0%
CTCCTTGCCGGTGGGGAGAA+GGG + chr4.3:35770012-35770031 MS.gene056692:CDS 65.0%
GAGAGTTGGGGGGTCGATGG+GGG + chr4.3:35771785-35771804 MS.gene056692:intron 65.0%
GCGCATTCCCTTCTCCCCAC+CGG - chr4.3:35770022-35770041 None:intergenic 65.0%
GGAGAGTTGGGGGGTCGATG+GGG + chr4.3:35771784-35771803 MS.gene056692:intron 65.0%
GGGTTGGGTAAGTCGGGGCA+AGG + chr4.3:35771832-35771851 MS.gene056692:intron 65.0%
TCTCCTTGCCGGTGGGGAGA+AGG + chr4.3:35770011-35770030 MS.gene056692:CDS 65.0%
TTCCCTTCTCCCCACCGGCA+AGG - chr4.3:35770017-35770036 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 35768144 35772663 35768144 ID=MS.gene056692
chr4.3 mRNA 35768144 35772663 35768144 ID=MS.gene056692.t1;Parent=MS.gene056692
chr4.3 exon 35768144 35768223 35768144 ID=MS.gene056692.t1.exon1;Parent=MS.gene056692.t1
chr4.3 CDS 35768144 35768223 35768144 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35768316 35768374 35768316 ID=MS.gene056692.t1.exon2;Parent=MS.gene056692.t1
chr4.3 CDS 35768316 35768374 35768316 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35768766 35768835 35768766 ID=MS.gene056692.t1.exon3;Parent=MS.gene056692.t1
chr4.3 CDS 35768766 35768835 35768766 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35769437 35769638 35769437 ID=MS.gene056692.t1.exon4;Parent=MS.gene056692.t1
chr4.3 CDS 35769437 35769638 35769437 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35769733 35769798 35769733 ID=MS.gene056692.t1.exon5;Parent=MS.gene056692.t1
chr4.3 CDS 35769733 35769798 35769733 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35769955 35770095 35769955 ID=MS.gene056692.t1.exon6;Parent=MS.gene056692.t1
chr4.3 CDS 35769955 35770095 35769955 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35770743 35770796 35770743 ID=MS.gene056692.t1.exon7;Parent=MS.gene056692.t1
chr4.3 CDS 35770743 35770796 35770743 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35771470 35771562 35771470 ID=MS.gene056692.t1.exon8;Parent=MS.gene056692.t1
chr4.3 CDS 35771470 35771562 35771470 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
chr4.3 exon 35772616 35772663 35772616 ID=MS.gene056692.t1.exon9;Parent=MS.gene056692.t1
chr4.3 CDS 35772616 35772663 35772616 ID=cds.MS.gene056692.t1;Parent=MS.gene056692.t1
Gene Sequence

>MS.gene056692

ATGGTATCTCAAGCGCTATCAGTTCCTGCAACTCCCACCTTCACCATCGCTTCTCACAGAAGAATCCCTTCTCAACTTACGTTTTCTCACAGGTTCATTTTCATTTCAATTACCCATTTCAACTTTCGCTTTCACTTTTATTTTTGTTCAAATCTTTATAATTGAATTGCAGAAACCCTTGCACGATATCTTCTTCCTTGCAAAGCCCCTATGGTAGTTCTTCTCAAATCGGTAATTTCCAATTTTATCCAATTTTCTTTGTCTACTATTTGTAATTTCATAGTTTAATTTTAACCCCAAATGAATGAGTTTTTGTTTTGAAATGACAAATTTTAGTATTTGTTAGTGATTGGAGTTGAAAGAAATATATCATTAGTATAAGAAATATATCAATTTAGGGACTGAATTGATGGATTTTCATATACTTTATGAACGAAGTTGATAAATTTATATACTTTAGGGACTAGCTATTACACATTTATGCAGTTTAGGGATTAAATTGGAAAGAAAGTGATAGTTTGAGGACCAAATTGATAGTTAATTCAGTTTTAATACGAATTACAAACTACTTTTATTTGAACAATAAAGCATGTTATGACATGTAGGTTTTTGTTTTACGCAGGCTTATCAAGTAAAACCCATGGTTTTCGCTTAAAACTTGATGAGAAAAGTACACATGATGTTGGTACAAGGTACAAGTTTTTTTTTACCCTTGTTACTCTTTCAAGTGCTTCATGTTTAAGTATAATGTGTTTGTTTAGTAGGAGACTTGTGAACACCTAGTATTGTCCATTTTTTCAAGGTTCAACCGAAGCCTGACTTTCTGTGATTGTACTGGGAAAATAAGTGTAAGGGTATATAAGTAATTAGGTTGTAAAGTAGTGGATTGTGAAACACTACCAAAACATTCAGCTTATAGACCGTGGCATGGCGTATTTAGAATCAGCATTATGACCTATCTATGTAGTCTATGGAAATATCATTGTAACTATAATGTAAAGAGTTTAATTTGTATGTACTGTCAGTGTAATTTTTTTACACATGCATCCAATTACATCTCATAAATTGACGTAACAATGTGATATGTAGGGCGTATATGTAAAACTTTTTTACACAAATACGAATTGAATTATTTTGTAAATGGGTCTATTTAGCTAATTTTCTGTATACTTTTTTATTCTTGAACTTTGATACTTTAAGGAACCTCTGAAATGAGTTAAAACCCCAGTCTCTGCACTCTTTTAAGTATTAATGAATGAAGGACAACTTATTGATATTTCAGTTTGCTTGTAGTTACGGTGTAATTGAAGCCAAGACGGGGAACCCGCCAATAACACCAGCTATCATGACTCCTGGAGGAGCTCTTGATCTCTCATCTGTTTTGTTCAGGAATCGTATAATATTCATAGGACAGCCAGTTAACTCACAAGTGGCTCAGAGAGTTATATCGCAGCTTGTGACTCTGGCTACTATTGATCCAGATGCAGATATAATGGTTTGTTATGTTTTGATTTTTGACCCTATTATTTGACTTTTGACTAATCTTACAATGGATTATGTGATTCATATTGAGCTGTTTCTATTTGCAGATGTATATAAATTGCCCTGGTGGAAGCACTTATTCGGTGCTTGCAATTTATGATTGCATGTCTTGGGTAAGATAAATGTTTTGTCATCCCCATCCTACCTTACACACACACACAAAAAAAAAAATTAATTTACTTTTTCATTCCTTTGTTAGCTACTTTAATTCCTTAATAGTTGTCAATGTTTTTACCTTGAAAGCATTTGGTGGCCACATTTGTTTTCAGATAAAGCCAAAGGTTGGTACAGTATGTTTCGGAGTAGCTGCAAGCCAAGGAACACTTCTCCTTGCCGGTGGGGAGAAGGGAATGCGCTATTCAATGCCAAATGCTCGCATTATGATGAATCAACCACAATGTGGATATGGGGTAAGAATCAAGCTTTTGAAATTTTGTTATGGAAAATGCACTTTAGATTTTATGATGGAGCTGACAGATTATATAAAGAAAAAGACGATACTGATTTGGTGTAGGAAGAGGATAATAACAATGACAATATGGTCCCAGTCCCACTTTTTATCAATTATCATAATAAGTAGTTAAATACGGACTGTGCCATCTAGCATATGAGTAAAATAATCAAATGCACACTGTGTTCTCATTCCTCCCTACAGTTTACAAACTTCTATAAAACTAGAGGACATGAATTTTCAGCATTGAGATTGAGGCTGATGTGCCAAGTTGCATTGGACATAACCTTTTAATTTTTGGGACTAGTTGCAATGGAATATCTATAAGTTTTATTGGAATCATGATTTCTTCAAATGTAAATGTTTTATTCAAAGTTAAATTTTTAAAGTTAATCATAGAATGCACTATGTAGTTTGGCATTTGATGTATAGATATACTAAATAACGAAGGTATATTGTTTTTCATTTTTACATAAAAAAGAGCTATGGACTATGGTGTATTTTTGGTTGCGGCAGCAGTTTTATTTTGTGCATTATGTGATGTGAAGTGTTTCGGTCAATACTCAATAGGCATGATGATCGAGTTTGTTATTAATCTGACTGCAGGGTCATGTTGAGGATGTGAGACGTCTAGTGAATGAAGCTGTTCAATCCCGCCATGTTAGTCTTTCTTCCACTGAAGTTGCATGATTTTTATAATTTACAGACAGCTGTAAAATGCTCCTGTGAACTTAGTTTTGCTGAAAGTAGGATTTTCATTCAGTCTTGACTGTGACATTTATATTTGTGAATTGTGACAACCCTTGAATGTATAGTGTTGGGACTTTTCAATGCATTATCATGCACTGCCTCGTTGAATTCTTTACCTGGAACAATAGATACATGACTTTGGTTTTTGAGACAATAGATACATGACTTATTGTCAAAAACCGATTGTTCAATAGTTTGAGTTGCCGGTCCCCAATCTTGTTAATAGAAGTTGAATTTTAGCGCGGGCAGGATAGTTTTGTGCACTCCATCTTGCTAAAAGCCCAAATGACTTTGTGTGAGAAGTTGTCCTGGTTTTAAACCATTGATGAGCCATCCAACAGAATGGACTATTGGAAATTTGGTTCATTGCAGAAGAATATTAAATTTTAATTTTCAATATATGTGAAACTGGAAACTTCATTCAACATGATTTCTTCATGCTCAAGTTACCATGGCAGCTGCTACTTGGTTATTATTTTTTTTTTTTTTGAAGAATAGTTATTTTGTTTGTTATAGTTTATCTGACAGTTCTTGGAAAGCTAAGCCTATTTTCCTCTTCTTCCCCCTTCTTTTTGGAGTACAGAAAATGGAGAAGATGTTCAGTGCTTTCACTGGACAGACATTAGAGAAGGTGCAAGAGTACACAGAGAGGGACAGTTTTCTTTCTGTTTCTGAGGTAATATGAACTGTTTTTCTTCTGTAACTGAAATAATAAGTTAATGCGACTGAGAATGGTTTCTCGAAGAAACCAGAATATTCTCTTTCTAACAAGAAATGAATTTTATGACTGTTGAAGAACAGAAGCAAATGTTTCTGTTATAACTTCTGAAAAGAATCTCAACACATCATTATTCTATCAAAAATGCGTTAAAGAGTATCAAAGTTTTTATATATATTGGAGAGTTGGGGGGTCGATGGGGGTAAGCCAGAATTGAGAGGAATATTGGGTTGGGTAAGTCGGGGCAAGGCCCTCTAGGTTCCTTCCCATCAGGTTTATCATTTTCTGTGTCAGTTTTCTCCATTTCTACAACCCTTTTGTAAAGAGTTCTTATGTTGTTTGGGAAATACATATTATTATGTGAGTGGAGAGTTTATCATCGATATCTATATGTTGTTTTACCCATTGTTAGTTCTTATCATATCATGATTTGTTTTGTTATTTACTTTGGATTAGAAGTTTAGTACATTAGTATAGGTATATTTTGAGTATTCCCTTTAGCCATTTGTCCATTTGTCTGTTTTCTATTGAGTATTATTATGGTGACTAGTCTCAGTGAACACTGTTACTATGTTTAGTTTATGATCTTAATAGTTGTCTGGCTTAAATGCACTTCTGGTCCGTCTCTTTTAACTAAAACTTGATTTTAATCCTCTCATTTCTAAATATAGGATTTTCGTCCCAAGTTTCAGGATTTTTCCTCTCAACCCAGTTTGGGACTTATTTTTCCCAACAACCCACTTCTGGTGCAAATTAGGAATGCAAATCATCAAATGCAATTCTACATAATTAATAAATACGCCACGTCATGAAAAATAAGTCTCAAATTTGATTGTGGGGGAAAATCTTGTAACTTGTGAAACATGAGGACTAAATATCTGGATTTAGAAATGAGGGGAATAAAATCCGGCTCTAGTTAAAAATAGGGAGATCAAAAGTACATTTAAGCCTTGTTTTACTGCTAAAAATTTTCTTACCCGGTATTTTTGTATCTGCCTCTTCTCATTTCAGGCTTTGGAGTTTGGTCTTATTGATGGTGTCCTGGAAACAGAGTATTGA

Protein sequence

>MS.gene056692.t1

MVSQALSVPATPTFTIASHRRIPSQLTNPCTISSSLQSPYGSSSQIGLSSKTHGFRLKLDEKSTHDVGTSYGVIEAKTGNPPITPAIMTPGGALDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDPDADIMMYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIMMNQPQCGYGGHVEDVRRLVNEAVQSRHKMEKMFSAFTGQTLEKVQEYTERDSFLSVSEALEFGLIDGVLETEY