Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70317.t1 | KEH20871.1 | 88.4 | 718 | 51 | 3 | 583 | 1270 | 43 | 758 | 1.80E-292 | 1015.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70317.t1 | O94481 | 28.6 | 175 | 111 | 3 | 1084 | 1257 | 353 | 514 | 8.5e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70317.t1 | A0A072TUQ3 | 88.4 | 718 | 51 | 3 | 583 | 1270 | 43 | 758 | 1.3e-292 | 1015.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70317.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene70317 | 0.823317 | 1.48E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene70317 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene70317 | 0.825317 | 5.01E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene70317 | 0.836719 | 7.94E-57 | -1.69E-46 |
| MS.gene056403 | MS.gene70317 | 0.875086 | 4.06E-68 | -1.69E-46 |
| MS.gene056605 | MS.gene70317 | 0.870438 | 1.46E-66 | -1.69E-46 |
| MS.gene056638 | MS.gene70317 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene056986 | MS.gene70317 | 0.818252 | 2.16E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene70317 | 0.82297 | 1.78E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene70317 | 0.826293 | 2.94E-54 | -1.69E-46 |
| MS.gene060830 | MS.gene70317 | 0.820846 | 5.53E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70317.t1 | MTR_8g091830 | 90.407 | 761 | 19 | 7 | 544 | 1270 | 18 | 758 | 0.0 | 1222 |
| MS.gene70317.t1 | MTR_8g091830 | 62.830 | 417 | 105 | 10 | 113 | 482 | 332 | 745 | 1.95e-121 | 395 |
| MS.gene70317.t1 | MTR_8g091830 | 53.211 | 109 | 32 | 3 | 31 | 120 | 37 | 145 | 6.34e-18 | 90.1 |
| MS.gene70317.t1 | MTR_8g091830 | 90.079 | 756 | 19 | 7 | 544 | 1263 | 18 | 753 | 0.0 | 1204 |
| MS.gene70317.t1 | MTR_8g091830 | 62.411 | 423 | 109 | 10 | 107 | 482 | 328 | 747 | 2.89e-120 | 394 |
| MS.gene70317.t1 | MTR_8g091830 | 52.252 | 111 | 32 | 3 | 31 | 120 | 37 | 147 | 1.58e-17 | 89.0 |
| MS.gene70317.t1 | MTR_8g091850 | 74.144 | 263 | 40 | 2 | 146 | 403 | 55 | 294 | 1.04e-120 | 376 |
| MS.gene70317.t1 | MTR_8g091850 | 55.518 | 299 | 64 | 5 | 881 | 1174 | 57 | 291 | 3.62e-78 | 260 |
| MS.gene70317.t1 | MTR_4g067250 | 54.500 | 400 | 147 | 10 | 878 | 1270 | 209 | 580 | 1.32e-97 | 324 |
| MS.gene70317.t1 | MTR_4g067250 | 43.536 | 526 | 198 | 18 | 11 | 490 | 107 | 579 | 9.84e-87 | 294 |
| MS.gene70317.t1 | MTR_8g091840 | 96.296 | 54 | 1 | 1 | 432 | 484 | 5 | 58 | 1.59e-27 | 106 |
| MS.gene70317.t1 | MTR_8g091840 | 59.701 | 67 | 19 | 4 | 1206 | 1270 | 5 | 65 | 6.74e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70317.t1 | AT4G39160 | 28.571 | 546 | 311 | 16 | 686 | 1191 | 15 | 521 | 2.30e-43 | 168 |
| MS.gene70317.t1 | AT4G39160 | 37.344 | 241 | 133 | 7 | 187 | 416 | 288 | 521 | 1.55e-31 | 132 |
| MS.gene70317.t1 | AT4G39160 | 28.571 | 546 | 311 | 16 | 686 | 1191 | 15 | 521 | 2.30e-43 | 168 |
| MS.gene70317.t1 | AT4G39160 | 37.344 | 241 | 133 | 7 | 187 | 416 | 288 | 521 | 1.55e-31 | 132 |
| MS.gene70317.t1 | AT4G39160 | 28.571 | 546 | 311 | 16 | 686 | 1191 | 15 | 521 | 3.14e-43 | 168 |
| MS.gene70317.t1 | AT4G39160 | 37.344 | 241 | 133 | 7 | 187 | 416 | 288 | 521 | 2.33e-31 | 132 |
Find 245 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAACAGCCTTGTTAAA+TGG | 0.149899 | 4.1:-9469254 | None:intergenic |
| CCAATATTCCTAACCCTTTC+CGG | 0.169829 | 4.1:-9475652 | None:intergenic |
| TGTTGATGCGCTTGTCTTCT+TGG | 0.180256 | 4.1:-9477102 | None:intergenic |
| TGCATTGGAATTTCAGATAT+TGG | 0.186110 | 4.1:-9468013 | None:intergenic |
| TGAATAAGTGGACGAGTTTC+CGG | 0.196625 | 4.1:-9474237 | None:intergenic |
| CCGATTCCTCTTCTCATTTC+CGG | 0.203819 | 4.1:+9474265 | MS.gene70317:CDS |
| CTTCTATTATCTTCAGAAAA+TGG | 0.204672 | 4.1:-9475925 | None:intergenic |
| TCGATCACCGATTTATAAAA+AGG | 0.211257 | 4.1:-9471090 | None:intergenic |
| GAAGAAATCAGTGGCTAAAA+AGG | 0.211844 | 4.1:+9477133 | MS.gene70317:CDS |
| TCCTAACCCTTTCCGGTTCC+AGG | 0.250680 | 4.1:-9475645 | None:intergenic |
| ATCAACGAACAATACCTATT+AGG | 0.275169 | 4.1:+9477379 | MS.gene70317:CDS |
| AAAGACTGGTTATTATATAA+AGG | 0.275999 | 4.1:-9470560 | None:intergenic |
| CCCTTTCCGGTTCCAGGATC+AGG | 0.297732 | 4.1:-9475639 | None:intergenic |
| TCTAGGTCGTGGCTTAATCT+TGG | 0.307370 | 4.1:-9475754 | None:intergenic |
| GATCTTCTATGCTTCTTTAG+AGG | 0.313417 | 4.1:-9469149 | None:intergenic |
| GACCCTCCTTATGTTATTGA+TGG | 0.314436 | 4.1:+9477032 | MS.gene70317:CDS |
| ATTGAATTACCAGTCTTTCA+TGG | 0.319869 | 4.1:+9478696 | MS.gene70317:CDS |
| TGGATCAATGCCAGATTTCA+TGG | 0.322835 | 4.1:-9476648 | None:intergenic |
| ACAGAAACAAACTTCTAATA+AGG | 0.327322 | 4.1:+9471116 | MS.gene70317:CDS |
| TCAGCCAATGTGGGACTATC+TGG | 0.334761 | 4.1:-9476710 | None:intergenic |
| ACAGAAACAAAATTCTAATA+AGG | 0.334895 | 4.1:+9479225 | MS.gene70317:CDS |
| GCGGGCTTCAAAAGCGCTTC+AGG | 0.341307 | 4.1:+9475420 | MS.gene70317:CDS |
| TCAACGAACAATACCTATTA+GGG | 0.342822 | 4.1:+9477380 | MS.gene70317:CDS |
| AGACGATACCGAAGAGAAAA+AGG | 0.345945 | 4.1:+9468093 | MS.gene70317:CDS |
| AAGACTGGTTATTATATAAA+GGG | 0.352288 | 4.1:-9470559 | None:intergenic |
| GATGCCTCAGATTTAATGAT+AGG | 0.358895 | 4.1:+9479265 | MS.gene70317:CDS |
| ATATAGGCTATTAGGCAGTT+TGG | 0.359903 | 4.1:+9478900 | MS.gene70317:intron |
| AGTAAAATAATATCCCTAAT+AGG | 0.364611 | 4.1:-9477393 | None:intergenic |
| TCTTGACAGCAACAAGAGTT+TGG | 0.369143 | 4.1:+9475362 | MS.gene70317:CDS |
| CATGATATCAATCTTAATAA+TGG | 0.369196 | 4.1:+9466925 | MS.gene70317:CDS |
| ACTCTGAAGGCATAGCATTC+AGG | 0.370180 | 4.1:-9475981 | None:intergenic |
| CCTCAACAGCCTTGTTAAAT+GGG | 0.374079 | 4.1:-9469253 | None:intergenic |
| GGTGGTTTGGGCTTAGCCTT+AGG | 0.384423 | 4.1:-9474537 | None:intergenic |
| AATGAACCTTCCCCATTTGT+AGG | 0.385631 | 4.1:-9475339 | None:intergenic |
| CATAAAATATCTTCTATTGC+TGG | 0.387802 | 4.1:+9476903 | MS.gene70317:CDS |
| AAAGACTGGTAATTCAATAA+AGG | 0.392051 | 4.1:-9478691 | None:intergenic |
| TAAAGATCAAGAAGATTCTA+TGG | 0.395924 | 4.1:+9480067 | MS.gene70317:CDS |
| AGTGTTAGTGTACCTTTGAT+TGG | 0.396209 | 4.1:-9477558 | None:intergenic |
| TCAATGGGGCAGTCAGGATC+AGG | 0.398869 | 4.1:-9476602 | None:intergenic |
| TTTGTCAAGCCTTCATGCCT+TGG | 0.399449 | 4.1:-9476683 | None:intergenic |
| GCTTCTGCTTCTGCTTCATC+TGG | 0.399801 | 4.1:+9475798 | MS.gene70317:CDS |
| TGTGCGCAAACCTTAGTTCC+AGG | 0.400334 | 4.1:-9479307 | None:intergenic |
| AACAAAGAACTGCCTACAAA+TGG | 0.403333 | 4.1:+9475327 | MS.gene70317:CDS |
| AGTGATGTCCTCCCTGATCC+TGG | 0.404496 | 4.1:+9475627 | MS.gene70317:CDS |
| TCGTCAGATTGCTCTGGAAC+TGG | 0.405106 | 4.1:-9480095 | None:intergenic |
| CTAGGTCGTGGCTTAATCTT+GGG | 0.405320 | 4.1:-9475753 | None:intergenic |
| ATATAATAACCAGTCTTTCA+AGG | 0.406319 | 4.1:+9470565 | MS.gene70317:CDS |
| CAAACCTTAGTTCCAGGTGT+TGG | 0.407219 | 4.1:-9479301 | None:intergenic |
| CTTAAATCTTTCAATGTGAA+TGG | 0.409452 | 4.1:+9476396 | MS.gene70317:CDS |
| AGCATTATGAGAATCATGTT+TGG | 0.410582 | 4.1:-9474664 | None:intergenic |
| ACAAGGCACCTAGGGGAAAA+TGG | 0.411092 | 4.1:+9478719 | MS.gene70317:CDS |
| GATTATCAATCCATGAAATC+TGG | 0.414632 | 4.1:+9476638 | MS.gene70317:CDS |
| TCCCATGGAAAATCAAATTC+CGG | 0.417667 | 4.1:+9471947 | MS.gene70317:CDS |
| CATAGTGGACAAGGCTCTGC+TGG | 0.417669 | 4.1:+9469599 | MS.gene70317:intron |
| CATAGTGGACAAGGCTCTGC+TGG | 0.417669 | 4.1:+9477341 | MS.gene70317:intron |
| AGAGGTTGCAACAGCTGAGC+AGG | 0.420001 | 4.1:+9480025 | MS.gene70317:CDS |
| ACCTAAGGTTAAATCGAAAC+GGG | 0.420062 | 4.1:+9466822 | MS.gene70317:intron |
| TGCCTTGGAATTTCAGATGT+TGG | 0.423028 | 4.1:-9476668 | None:intergenic |
| GGCTAATGATGATTTAGAAA+AGG | 0.423170 | 4.1:+9469439 | MS.gene70317:CDS |
| GCATTATGAGAATCATGTTT+GGG | 0.424036 | 4.1:-9474663 | None:intergenic |
| CAAAAGTAGGTCGGAAATAC+AGG | 0.424081 | 4.1:+9476455 | MS.gene70317:CDS |
| GAGAGGCAGGTTTGCGCCTA+AGG | 0.424149 | 4.1:+9474521 | MS.gene70317:CDS |
| CCACATAGAAGTTGAAGATC+AGG | 0.425203 | 4.1:+9471920 | MS.gene70317:CDS |
| AAACCTTAGTTCCAGGTGTT+GGG | 0.426302 | 4.1:-9479300 | None:intergenic |
| CATAGAAGATCTCCTATTGC+TGG | 0.429813 | 4.1:+9469161 | MS.gene70317:CDS |
| ATTGCTGGTGTGGAGGATAA+AGG | 0.436946 | 4.1:+9469176 | MS.gene70317:CDS |
| ACAAGACACCTAGGGCAAAA+TGG | 0.437516 | 4.1:+9470588 | MS.gene70317:CDS |
| ACAAAGAACTGCCTACAAAT+GGG | 0.438146 | 4.1:+9475328 | MS.gene70317:CDS |
| GTCAAAGCTTCTTCATGCAT+TGG | 0.440699 | 4.1:-9468028 | None:intergenic |
| CACCTAAGGTTAAATCGAAA+CGG | 0.441683 | 4.1:+9466821 | MS.gene70317:intron |
| ACATTGAAAGATTTAAGATC+TGG | 0.441714 | 4.1:-9476390 | None:intergenic |
| TGTGGATACCTCAGGAATAT+CGG | 0.442586 | 4.1:-9472424 | None:intergenic |
| TTATCCTCCACACCAGCAAT+AGG | 0.442858 | 4.1:-9469173 | None:intergenic |
| GCTTTGAACAATCATGCAAC+AGG | 0.445071 | 4.1:+9470915 | MS.gene70317:CDS |
| GTCCTCCCTGATCCTGGAAC+CGG | 0.446592 | 4.1:+9475633 | MS.gene70317:CDS |
| CCGGAAATGAGAAGAGGAAT+CGG | 0.449413 | 4.1:-9474265 | None:intergenic |
| CAGTTCTTCCATCCTACCTA+TGG | 0.454716 | 4.1:-9467885 | None:intergenic |
| CCTGATCCTGGAACCGGAAA+GGG | 0.454744 | 4.1:+9475639 | MS.gene70317:CDS |
| GGACCCAACACCTGGAACTA+AGG | 0.455739 | 4.1:+9479297 | MS.gene70317:CDS |
| CTACTTAGGCTGAGAACAAA+TGG | 0.456716 | 4.1:+9472354 | MS.gene70317:intron |
| ATGGTTAAGCGAGTAGTTGA+TGG | 0.457692 | 4.1:-9467866 | None:intergenic |
| GATGCCTCGGATTTCATGCC+AGG | 0.457944 | 4.1:+9471159 | MS.gene70317:CDS |
| AAAGGTTGCAACAGCTGAGC+AGG | 0.459179 | 4.1:+9471896 | MS.gene70317:CDS |
| ACTGATTTACCAAAGCTAGA+AGG | 0.460360 | 4.1:-9476033 | None:intergenic |
| GCTAATGATGATTTAGAAAA+GGG | 0.461578 | 4.1:+9469440 | MS.gene70317:CDS |
| GCCATGAATAATCGTGGAAA+AGG | 0.463451 | 4.1:+9479029 | MS.gene70317:CDS |
| GGATTTCATGCCAGGGGAGG+TGG | 0.466274 | 4.1:+9471167 | MS.gene70317:CDS |
| ACATTGTCAATGGGGCAGTC+AGG | 0.469696 | 4.1:-9476608 | None:intergenic |
| GGGTCTTCAACCACCTCCCC+TGG | 0.469715 | 4.1:-9471177 | None:intergenic |
| TGCAACAGCTGAGCAGGAGC+AGG | 0.470277 | 4.1:+9480031 | MS.gene70317:CDS |
| ATTGCTGGTGTGGAGGATAA+AGG | 0.470324 | 4.1:+9476918 | MS.gene70317:CDS |
| GTGTCTTGTCCTTGAAAGAC+TGG | 0.471184 | 4.1:-9470574 | None:intergenic |
| TCATCATAGACATTGTCAAT+GGG | 0.474029 | 4.1:-9476617 | None:intergenic |
| CCCATTTAACAAGGCTGTTG+AGG | 0.477110 | 4.1:+9469253 | MS.gene70317:CDS |
| TCATTGAATGAGGCTGTTAA+CGG | 0.478665 | 4.1:+9476996 | MS.gene70317:CDS |
| GAGAATGAGGACCCAACACC+TGG | 0.480041 | 4.1:+9479289 | MS.gene70317:CDS |
| AATAACTTGCAAACTTTCGT+TGG | 0.480571 | 4.1:-9467939 | None:intergenic |
| CAGTATCGTCTTGCTGCAAA+AGG | 0.489581 | 4.1:-9476733 | None:intergenic |
| TTCTGAAGATAATAGAAGCT+TGG | 0.493783 | 4.1:+9475930 | MS.gene70317:CDS |
| ATCATCATAGACATTGTCAA+TGG | 0.494759 | 4.1:-9476618 | None:intergenic |
| TTCTTCGCCGAGATGAATGC+GGG | 0.496692 | 4.1:-9469487 | None:intergenic |
| CGGAAATGAGAAGAGGAATC+GGG | 0.500025 | 4.1:-9474264 | None:intergenic |
| ATTCTCAACCATGATGCAAC+TGG | 0.501051 | 4.1:+9476180 | MS.gene70317:CDS |
| TGACGTAGTGTACCTTTGAT+TGG | 0.502991 | 4.1:-9469836 | None:intergenic |
| AACCATGATGCAACTGGTAC+AGG | 0.505460 | 4.1:+9476186 | MS.gene70317:CDS |
| CTTGATCTTTAACATTGATG+TGG | 0.506223 | 4.1:-9480055 | None:intergenic |
| GGCTAATGATGATTCAGAAA+AGG | 0.506523 | 4.1:+9477181 | MS.gene70317:CDS |
| TCATCTCCATCAATAACATA+AGG | 0.510363 | 4.1:-9477038 | None:intergenic |
| TCACTATCGTCAGATTGCTC+TGG | 0.510890 | 4.1:-9480101 | None:intergenic |
| CTTGTCTGCGGAAATCGAGC+TGG | 0.511468 | 4.1:+9475596 | MS.gene70317:CDS |
| TAGCATTCAGGAAGTCAGAA+TGG | 0.511956 | 4.1:-9475969 | None:intergenic |
| TATTAGACGTGCAGAACGTA+TGG | 0.514226 | 4.1:+9469665 | MS.gene70317:CDS |
| ATACATTAGTTCCATGTGTC+GGG | 0.514518 | 4.1:-9471197 | None:intergenic |
| TTTCATGGACAAGGCACCTA+GGG | 0.515232 | 4.1:+9478711 | MS.gene70317:CDS |
| GACCTGCCGGAAAACGAGGC+CGG | 0.515767 | 4.1:+9474203 | MS.gene70317:CDS |
| TAACATTTACCACGTGTGAC+AGG | 0.515968 | 4.1:-9466693 | None:intergenic |
| AATAAGGAAGAAGATACTGC+TGG | 0.517268 | 4.1:+9479241 | MS.gene70317:CDS |
| ATGCCTCAGATTTAATGATA+GGG | 0.518508 | 4.1:+9479266 | MS.gene70317:CDS |
| CCCTGATCCTGGAACCGGAA+AGG | 0.518602 | 4.1:+9475638 | MS.gene70317:CDS |
| TTGCACTGTTCTCGACCTGC+CGG | 0.519763 | 4.1:+9474190 | MS.gene70317:CDS |
| TGATAATTATCAGACCTCAT+AGG | 0.521077 | 4.1:-9466904 | None:intergenic |
| AAACGGGGAATTTCATCTAA+AGG | 0.522905 | 4.1:+9466838 | MS.gene70317:CDS |
| GCAGAAGCAGAAGCAGTAGC+TGG | 0.523053 | 4.1:-9475789 | None:intergenic |
| ATGATACAACTGAGTTTCCC+TGG | 0.524533 | 4.1:+9470819 | MS.gene70317:CDS |
| CCTGATCTTCAACTTCTATG+TGG | 0.526256 | 4.1:-9471920 | None:intergenic |
| GTGCCTTGTCCATGAAAGAC+TGG | 0.528971 | 4.1:-9478705 | None:intergenic |
| GCATCATATAACCACTGTAA+AGG | 0.531639 | 4.1:-9470894 | None:intergenic |
| ATGGCATCAGTTAACAGTAA+AGG | 0.533326 | 4.1:-9479011 | None:intergenic |
| TTTAATGATAGGGGAGAATG+AGG | 0.536462 | 4.1:+9479276 | MS.gene70317:CDS |
| AAAAGTTCCCGCATTCATCT+CGG | 0.541414 | 4.1:+9469480 | MS.gene70317:CDS |
| CCTTTCCGGTTCCAGGATCA+GGG | 0.543738 | 4.1:-9475638 | None:intergenic |
| TAGAGATGAATTTAGAGACC+TGG | 0.547077 | 4.1:+9478627 | MS.gene70317:CDS |
| GCTGATATCGATGTCAATAA+CGG | 0.547205 | 4.1:+9474684 | MS.gene70317:CDS |
| CTGCAAAAGGTCAGCCAATG+TGG | 0.547743 | 4.1:-9476720 | None:intergenic |
| CATACATTAGTTCCATGTGT+CGG | 0.547764 | 4.1:-9471198 | None:intergenic |
| AGCATTCAGGAAGTCAGAAT+GGG | 0.548782 | 4.1:-9475968 | None:intergenic |
| TGCAGAACATAAGGAGCGGT+TGG | 0.551127 | 4.1:+9477416 | MS.gene70317:CDS |
| AATATCTTCTATTGCTGGTG+TGG | 0.552691 | 4.1:+9476908 | MS.gene70317:CDS |
| GTGTACCTTTGATTGGTGGA+AGG | 0.552725 | 4.1:-9477551 | None:intergenic |
| GTTTCCGGCGAGCGAAACTC+CGG | 0.554807 | 4.1:-9474222 | None:intergenic |
| CTTTCATGGACAAGGCACCT+AGG | 0.554899 | 4.1:+9478710 | MS.gene70317:CDS |
| TCACTATCATCAGATTGCTC+CGG | 0.557302 | 4.1:-9471966 | None:intergenic |
| CACCTGTACCAGTTGCATCA+TGG | 0.562328 | 4.1:-9476188 | None:intergenic |
| TGGCTCGATCATCATCATCC+AGG | 0.563395 | 4.1:-9478645 | None:intergenic |
| TCTGAAATTCCAAGGCATGA+AGG | 0.563472 | 4.1:+9476674 | MS.gene70317:CDS |
| ATATCGGAGGAAAGATAAGA+TGG | 0.563579 | 4.1:-9472408 | None:intergenic |
| AAGATCTCCTATTGCTGGTG+TGG | 0.563647 | 4.1:+9469166 | MS.gene70317:CDS |
| ATCTCCTATTGCTGGTGTGG+AGG | 0.564088 | 4.1:+9469169 | MS.gene70317:CDS |
| AGAACATAAGGAGCGGTTGG+CGG | 0.564104 | 4.1:+9477419 | MS.gene70317:CDS |
| TCGCTTAACCATAGGTAGGA+TGG | 0.564291 | 4.1:+9467877 | MS.gene70317:CDS |
| ATCTTCTATTGCTGGTGTGG+AGG | 0.566330 | 4.1:+9476911 | MS.gene70317:CDS |
| CTTCAACTGAAGAACCTATG+AGG | 0.569557 | 4.1:+9466890 | MS.gene70317:CDS |
| TGAAGATCAGGAAGATCCCA+TGG | 0.569852 | 4.1:+9471932 | MS.gene70317:CDS |
| TTTATATGCATGCAGTGACA+GGG | 0.572330 | 4.1:+9470448 | MS.gene70317:intron |
| TTTCTTCGCCGAGATGAATG+CGG | 0.572858 | 4.1:-9469488 | None:intergenic |
| CGTAGTGTACCTTTGATTGG+TGG | 0.573053 | 4.1:-9469833 | None:intergenic |
| GTTAGTGTACCTTTGATTGG+TGG | 0.573797 | 4.1:-9477555 | None:intergenic |
| ATCCAACATCTGAAATTCCA+AGG | 0.574184 | 4.1:+9476666 | MS.gene70317:CDS |
| AGATACCGCTAGAGATGCCT+CGG | 0.577005 | 4.1:+9471146 | MS.gene70317:CDS |
| CTCCCCTATCATTAAATCTG+AGG | 0.577536 | 4.1:-9479269 | None:intergenic |
| TGCAGAACGTATGGAGCGAT+CGG | 0.579460 | 4.1:+9469674 | MS.gene70317:CDS |
| GAATCGGGAAAATGAATAAG+TGG | 0.579516 | 4.1:-9474249 | None:intergenic |
| TCTCCATCAATAACATAAGG+AGG | 0.580123 | 4.1:-9477035 | None:intergenic |
| TCGTGAACTGCAGACTCTGA+AGG | 0.582141 | 4.1:-9475994 | None:intergenic |
| CAGGATACGATGGCAAAAGT+AGG | 0.587039 | 4.1:+9476442 | MS.gene70317:CDS |
| TCAACTACTCGCTTAACCAT+AGG | 0.587367 | 4.1:+9467869 | MS.gene70317:CDS |
| AGACTGGTTATTATATAAAG+GGG | 0.587808 | 4.1:-9470558 | None:intergenic |
| TGCCTCAGATTTAATGATAG+GGG | 0.588626 | 4.1:+9479267 | MS.gene70317:CDS |
| CGAGGATGCTAATAATGAAG+AGG | 0.589996 | 4.1:+9470481 | MS.gene70317:CDS |
| TGAGTTTGGAGAAGTGCGAG+AGG | 0.590260 | 4.1:+9475488 | MS.gene70317:CDS |
| GAGGCCGGAGTTTCGCTCGC+CGG | 0.590324 | 4.1:+9474218 | MS.gene70317:CDS |
| GTCATCGAGTGATTCTAGCC+CGG | 0.591218 | 4.1:-9476157 | None:intergenic |
| CTCGGATTTCATGCCAGGGG+AGG | 0.592720 | 4.1:+9471164 | MS.gene70317:CDS |
| CTTTGGTAAATCAGTTGCAG+AGG | 0.593038 | 4.1:+9476041 | MS.gene70317:CDS |
| TCTCGACCTGCCGGAAAACG+AGG | 0.593497 | 4.1:+9474199 | MS.gene70317:CDS |
| GCTGGTGTATTGCTGACTCT+AGG | 0.593908 | 4.1:-9475771 | None:intergenic |
| AAACATCTTCCACCAATCAA+AGG | 0.593927 | 4.1:+9469824 | MS.gene70317:CDS |
| CAATCTGACGATAGTGACGA+TGG | 0.595092 | 4.1:+9480107 | MS.gene70317:CDS |
| AATTAAGTTGAAGTACAAGA+AGG | 0.595648 | 4.1:+9478974 | MS.gene70317:CDS |
| AGATACTGAACTGTTCTATG+AGG | 0.599256 | 4.1:+9470619 | MS.gene70317:CDS |
| TACAAAATAATGAAGACGCA+TGG | 0.600991 | 4.1:+9480132 | MS.gene70317:CDS |
| CTGGTTATTATATAAAGGGG+TGG | 0.601015 | 4.1:-9470555 | None:intergenic |
| TTTCTTCGTCGAGATGCATG+GGG | 0.601698 | 4.1:-9477230 | None:intergenic |
| TCTTTCCTCCGATATTCCTG+AGG | 0.602906 | 4.1:+9472416 | MS.gene70317:CDS |
| CAACACCTTCCACCAATCAA+AGG | 0.602928 | 4.1:+9477546 | MS.gene70317:CDS |
| GGTAGGAGCAATGTGAATGT+TGG | 0.603064 | 4.1:+9466859 | MS.gene70317:CDS |
| GGGGAATTTCATCTAAAGGT+AGG | 0.604367 | 4.1:+9466842 | MS.gene70317:CDS |
| CAATAACATAAGGAGGGTCG+AGG | 0.606753 | 4.1:-9477028 | None:intergenic |
| CTTTCAAGGACAAGACACCT+AGG | 0.606828 | 4.1:+9470579 | MS.gene70317:CDS |
| GCTAGAAGTCAGCCTAAACG+TGG | 0.607960 | 4.1:+9467970 | MS.gene70317:CDS |
| ATAAAGGTGGTAAAACCTCA+AGG | 0.609003 | 4.1:+9476934 | MS.gene70317:CDS |
| ATCTTTCAATGTGAATGGCG+CGG | 0.609959 | 4.1:+9476401 | MS.gene70317:CDS |
| ATGCCTCGGATTTCATGCCA+GGG | 0.613701 | 4.1:+9471160 | MS.gene70317:CDS |
| ACTGATGCCATGAATAATCG+TGG | 0.614136 | 4.1:+9479023 | MS.gene70317:CDS |
| GTGATGATGAGTTACAAAGA+TGG | 0.615643 | 4.1:+9471985 | MS.gene70317:CDS |
| GGCTGATGCTAATTATGAAG+AGG | 0.617871 | 4.1:+9478579 | MS.gene70317:CDS |
| CTCCATCAATAACATAAGGA+GGG | 0.625247 | 4.1:-9477034 | None:intergenic |
| TGCAAAAGGTCAGCCAATGT+GGG | 0.626313 | 4.1:-9476719 | None:intergenic |
| ATAAAGGTAGTAAAACCTCA+AGG | 0.627073 | 4.1:+9469192 | MS.gene70317:CDS |
| GTGGTTGAAGACCCGACACA+TGG | 0.629822 | 4.1:+9471186 | MS.gene70317:CDS |
| CAATGGGGCAGTCAGGATCA+GGG | 0.632141 | 4.1:-9476601 | None:intergenic |
| CAAAGAACTGCCTACAAATG+GGG | 0.632541 | 4.1:+9475329 | MS.gene70317:CDS |
| TTATGTTCAGGTCTTGTCTG+CGG | 0.632639 | 4.1:+9475584 | MS.gene70317:intron |
| TTACCAGTCTTTCATGGACA+AGG | 0.633575 | 4.1:+9478702 | MS.gene70317:CDS |
| TAGTTGAGATTCTTTGTGAG+TGG | 0.635988 | 4.1:-9474634 | None:intergenic |
| TTCTGCAGATAGTCCCACAT+TGG | 0.636578 | 4.1:+9468054 | MS.gene70317:CDS |
| TTCTCCAGATAGTCCCACAT+TGG | 0.636578 | 4.1:+9476706 | MS.gene70317:CDS |
| GTATTGCTGACTCTAGGTCG+TGG | 0.639699 | 4.1:-9475765 | None:intergenic |
| GAACTGCCTACAAATGGGGA+AGG | 0.640951 | 4.1:+9475333 | MS.gene70317:CDS |
| GCGCTACCGGAAATGAGAAG+AGG | 0.643266 | 4.1:-9474271 | None:intergenic |
| TTCAGGAAGTCAGAATGGGA+AGG | 0.643999 | 4.1:-9475964 | None:intergenic |
| CTACTCGCTTAACCATAGGT+AGG | 0.644131 | 4.1:+9467873 | MS.gene70317:CDS |
| ATACGATGGCAAAAGTAGGT+CGG | 0.644577 | 4.1:+9476446 | MS.gene70317:CDS |
| TTTGTCCTTCCAGGATACGA+TGG | 0.645335 | 4.1:+9476432 | MS.gene70317:CDS |
| CTCCCCTGGCATGAAATCCG+AGG | 0.647352 | 4.1:-9471163 | None:intergenic |
| TCAGGGAGGACATCACTGAA+AGG | 0.647641 | 4.1:-9475621 | None:intergenic |
| CGTCTAATAATATCTCGAAG+AGG | 0.649690 | 4.1:-9469651 | None:intergenic |
| AATATCTATATGCAGTGATG+GGG | 0.653102 | 4.1:+9478525 | MS.gene70317:intron |
| AGAACGTATGGAGCGATCGG+CGG | 0.656384 | 4.1:+9469677 | MS.gene70317:CDS |
| GAAATCCGAGGCATCTCTAG+CGG | 0.659596 | 4.1:-9471151 | None:intergenic |
| TCAGAGTCTGCAGTTCACGA+TGG | 0.663364 | 4.1:+9475997 | MS.gene70317:CDS |
| TTTCAAGGACAAGACACCTA+GGG | 0.665399 | 4.1:+9470580 | MS.gene70317:CDS |
| AATCTGACGATAGTGACGAT+GGG | 0.666315 | 4.1:+9480108 | MS.gene70317:CDS |
| GCTTCAGGCGACATTTACAA+TGG | 0.666517 | 4.1:+9475435 | MS.gene70317:CDS |
| CATCATAGACATTGTCAATG+GGG | 0.666547 | 4.1:-9476616 | None:intergenic |
| TACTTGCAGAACATAAGGAG+CGG | 0.669846 | 4.1:+9477412 | MS.gene70317:CDS |
| TCTGATGCTCCTGTCACACG+TGG | 0.672401 | 4.1:+9466684 | MS.gene70317:CDS |
| TTATATGCATGCAGTGACAG+GGG | 0.675034 | 4.1:+9470449 | MS.gene70317:intron |
| AGCGGCAACATCCTTTACAG+TGG | 0.676327 | 4.1:+9470883 | MS.gene70317:CDS |
| CTAGAGATTAGCCTAAACGC+GGG | 0.676355 | 4.1:+9475402 | MS.gene70317:CDS |
| TTTCAATGTGAATGGCGCGG+AGG | 0.676830 | 4.1:+9476404 | MS.gene70317:CDS |
| TGCCTCGGATTTCATGCCAG+GGG | 0.682068 | 4.1:+9471161 | MS.gene70317:CDS |
| TTCTTCGTCGAGATGCATGG+GGG | 0.683443 | 4.1:-9477229 | None:intergenic |
| TGAAGTACAAGAAAGAAGAG+CGG | 0.690863 | 4.1:+9470865 | MS.gene70317:CDS |
| CCTAAGGTTAAATCGAAACG+GGG | 0.691493 | 4.1:+9466823 | MS.gene70317:intron |
| ACTAGAGATTAGCCTAAACG+CGG | 0.695442 | 4.1:+9475401 | MS.gene70317:CDS |
| AAGTTCAAAGAAGAAATCAG+TGG | 0.701783 | 4.1:+9469382 | MS.gene70317:CDS |
| AAGTTCAAAGAAGAAATCAG+TGG | 0.701783 | 4.1:+9477124 | MS.gene70317:CDS |
| TCGGAGGAAAGATAAGATGG+TGG | 0.701969 | 4.1:-9472405 | None:intergenic |
| TTCATGGACAAGGCACCTAG+GGG | 0.703716 | 4.1:+9478712 | MS.gene70317:CDS |
| CTAGAAGTCAGCCTAAACGT+GGG | 0.712351 | 4.1:+9467971 | MS.gene70317:CDS |
| TTCCGGTTCCAGGATCAGGG+AGG | 0.714895 | 4.1:-9475635 | None:intergenic |
| GGATACCTCAGGAATATCGG+AGG | 0.719269 | 4.1:-9472421 | None:intergenic |
| GCTGGTGTGGAGGATAAAGG+TGG | 0.724198 | 4.1:+9476921 | MS.gene70317:CDS |
| AAATGACGATGAGAACGACG+TGG | 0.754814 | 4.1:+9477070 | MS.gene70317:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9466661 | 9480178 | 9466661 | ID=MS.gene70317 |
| chr4.1 | mRNA | 9466661 | 9480178 | 9466661 | ID=MS.gene70317.t1;Parent=MS.gene70317 |
| chr4.1 | exon | 9466661 | 9466705 | 9466661 | ID=MS.gene70317.t1.exon1;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9466661 | 9466705 | 9466661 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9466829 | 9466946 | 9466829 | ID=MS.gene70317.t1.exon2;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9466829 | 9466946 | 9466829 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9467840 | 9468114 | 9467840 | ID=MS.gene70317.t1.exon3;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9467840 | 9468114 | 9467840 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9469128 | 9469283 | 9469128 | ID=MS.gene70317.t1.exon4;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9469128 | 9469283 | 9469128 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9469365 | 9469518 | 9469365 | ID=MS.gene70317.t1.exon5;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9469365 | 9469518 | 9469365 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9469604 | 9469698 | 9469604 | ID=MS.gene70317.t1.exon6;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9469604 | 9469698 | 9469604 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9469802 | 9469845 | 9469802 | ID=MS.gene70317.t1.exon7;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9469802 | 9469845 | 9469802 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9470463 | 9470640 | 9470463 | ID=MS.gene70317.t1.exon8;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9470463 | 9470640 | 9470463 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9470792 | 9470936 | 9470792 | ID=MS.gene70317.t1.exon9;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9470792 | 9470936 | 9470792 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9471088 | 9471215 | 9471088 | ID=MS.gene70317.t1.exon10;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9471088 | 9471215 | 9471088 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9471894 | 9472006 | 9471894 | ID=MS.gene70317.t1.exon11;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9471894 | 9472006 | 9471894 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9472362 | 9472437 | 9472362 | ID=MS.gene70317.t1.exon12;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9472362 | 9472437 | 9472362 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9474184 | 9474286 | 9474184 | ID=MS.gene70317.t1.exon13;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9474184 | 9474286 | 9474184 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9474520 | 9474705 | 9474520 | ID=MS.gene70317.t1.exon14;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9474520 | 9474705 | 9474520 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9475322 | 9475509 | 9475322 | ID=MS.gene70317.t1.exon15;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9475322 | 9475509 | 9475322 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9475594 | 9475660 | 9475594 | ID=MS.gene70317.t1.exon16;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9475594 | 9475660 | 9475594 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9475739 | 9475819 | 9475739 | ID=MS.gene70317.t1.exon17;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9475739 | 9475819 | 9475739 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9475920 | 9476062 | 9475920 | ID=MS.gene70317.t1.exon18;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9475920 | 9476062 | 9475920 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9476141 | 9476207 | 9476141 | ID=MS.gene70317.t1.exon19;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9476141 | 9476207 | 9476141 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9476385 | 9476476 | 9476385 | ID=MS.gene70317.t1.exon20;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9476385 | 9476476 | 9476385 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9476584 | 9476766 | 9476584 | ID=MS.gene70317.t1.exon21;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9476584 | 9476766 | 9476584 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9476870 | 9477260 | 9476870 | ID=MS.gene70317.t1.exon22;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9476870 | 9477260 | 9476870 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9477346 | 9477440 | 9477346 | ID=MS.gene70317.t1.exon23;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9477346 | 9477440 | 9477346 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9477536 | 9477567 | 9477536 | ID=MS.gene70317.t1.exon24;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9477536 | 9477567 | 9477536 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9478540 | 9478771 | 9478540 | ID=MS.gene70317.t1.exon25;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9478540 | 9478771 | 9478540 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9478906 | 9479050 | 9478906 | ID=MS.gene70317.t1.exon26;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9478906 | 9479050 | 9478906 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9479194 | 9479318 | 9479194 | ID=MS.gene70317.t1.exon27;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9479194 | 9479318 | 9479194 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| chr4.1 | exon | 9480023 | 9480178 | 9480023 | ID=MS.gene70317.t1.exon28;Parent=MS.gene70317.t1 |
| chr4.1 | CDS | 9480023 | 9480178 | 9480023 | ID=cds.MS.gene70317.t1;Parent=MS.gene70317.t1 |
| Gene Sequence |
| Protein sequence |
