Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70616.t1 | XP_003601289.1 | 97.1 | 628 | 18 | 0 | 1 | 628 | 1 | 628 | 1.10E-205 | 726.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70616.t1 | P92982 | 69.4 | 245 | 75 | 0 | 380 | 624 | 374 | 618 | 3.4e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70616.t1 | G7J5I4 | 97.1 | 628 | 18 | 0 | 1 | 628 | 1 | 628 | 7.7e-206 | 726.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene70616 | 0.847912 | 8.56E-60 | -1.69E-46 |
| MS.gene049989 | MS.gene70616 | 0.817979 | 2.49E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene70616 | 0.86692 | 2.00E-65 | -1.69E-46 |
| MS.gene051067 | MS.gene70616 | 0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene052143 | MS.gene70616 | 0.808655 | 2.78E-50 | -1.69E-46 |
| MS.gene052367 | MS.gene70616 | 0.815746 | 7.90E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene70616 | 0.800555 | 1.36E-48 | -1.69E-46 |
| MS.gene056526 | MS.gene70616 | 0.820885 | 5.41E-53 | -1.69E-46 |
| MS.gene059300 | MS.gene70616 | 0.819495 | 1.13E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene70616 | 0.826265 | 2.98E-54 | -1.69E-46 |
| MS.gene060492 | MS.gene70616 | 0.814699 | 1.35E-51 | -1.69E-46 |
| MS.gene060565 | MS.gene70616 | 0.826126 | 3.22E-54 | -1.69E-46 |
| MS.gene06057 | MS.gene70616 | 0.808086 | 3.68E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene70616 | 0.824198 | 9.19E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70616.t1 | MTR_3g078090 | 96.019 | 628 | 25 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1217 |
| MS.gene70616.t1 | MTR_5g034320 | 50.863 | 637 | 285 | 5 | 3 | 627 | 9 | 629 | 0.0 | 622 |
| MS.gene70616.t1 | MTR_8g064560 | 50.159 | 628 | 296 | 8 | 10 | 627 | 6 | 626 | 0.0 | 598 |
| MS.gene70616.t1 | MTR_8g064530 | 49.608 | 637 | 289 | 12 | 14 | 627 | 16 | 643 | 0.0 | 593 |
| MS.gene70616.t1 | MTR_8g064500 | 60.507 | 276 | 108 | 1 | 352 | 627 | 99 | 373 | 1.78e-121 | 365 |
| MS.gene70616.t1 | MTR_4g133840 | 61.881 | 202 | 61 | 2 | 427 | 627 | 3 | 189 | 7.96e-91 | 279 |
| MS.gene70616.t1 | MTR_5g033340 | 49.770 | 217 | 107 | 2 | 413 | 628 | 166 | 381 | 2.88e-71 | 235 |
| MS.gene70616.t1 | MTR_5g033340 | 49.669 | 151 | 75 | 1 | 458 | 608 | 4 | 153 | 6.79e-44 | 161 |
| MS.gene70616.t1 | MTR_5g033330 | 50.467 | 214 | 104 | 2 | 413 | 625 | 405 | 617 | 3.56e-67 | 231 |
| MS.gene70616.t1 | MTR_5g033330 | 48.731 | 197 | 99 | 2 | 413 | 608 | 197 | 392 | 6.24e-56 | 200 |
| MS.gene70616.t1 | MTR_5g033330 | 46.995 | 183 | 95 | 2 | 427 | 608 | 3 | 184 | 3.71e-49 | 181 |
| MS.gene70616.t1 | MTR_5g033350 | 48.276 | 203 | 103 | 2 | 427 | 628 | 1 | 202 | 5.24e-67 | 218 |
| MS.gene70616.t1 | MTR_4g133830 | 42.286 | 350 | 169 | 8 | 94 | 431 | 50 | 378 | 6.99e-67 | 224 |
| MS.gene70616.t1 | MTR_5g033360 | 46.083 | 217 | 97 | 4 | 413 | 628 | 27 | 224 | 4.68e-61 | 202 |
| MS.gene70616.t1 | MTR_1g008530 | 35.602 | 191 | 116 | 3 | 439 | 626 | 37 | 223 | 1.45e-35 | 134 |
| MS.gene70616.t1 | MTR_1g008500 | 37.696 | 191 | 112 | 4 | 439 | 626 | 198 | 384 | 2.39e-35 | 137 |
| MS.gene70616.t1 | MTR_1g008560 | 35.602 | 191 | 116 | 3 | 439 | 626 | 143 | 329 | 2.51e-35 | 136 |
| MS.gene70616.t1 | MTR_1g008510 | 35.079 | 191 | 117 | 3 | 439 | 626 | 139 | 325 | 3.06e-35 | 136 |
| MS.gene70616.t1 | MTR_8g075930 | 56.322 | 87 | 38 | 0 | 529 | 615 | 1 | 87 | 3.56e-34 | 125 |
| MS.gene70616.t1 | MTR_1g008590 | 34.884 | 215 | 132 | 5 | 413 | 624 | 113 | 322 | 3.56e-34 | 133 |
| MS.gene70616.t1 | MTR_0312s0030 | 34.419 | 215 | 133 | 5 | 413 | 624 | 113 | 322 | 1.29e-33 | 131 |
| MS.gene70616.t1 | MTR_1g007520 | 34.419 | 215 | 133 | 5 | 413 | 624 | 113 | 322 | 1.29e-33 | 131 |
| MS.gene70616.t1 | MTR_1g008470 | 36.449 | 214 | 129 | 5 | 413 | 624 | 89 | 297 | 1.48e-33 | 130 |
| MS.gene70616.t1 | MTR_3g109490 | 36.652 | 221 | 125 | 6 | 413 | 625 | 107 | 320 | 3.61e-33 | 130 |
| MS.gene70616.t1 | MTR_1g008460 | 37.566 | 189 | 111 | 5 | 438 | 624 | 111 | 294 | 1.67e-31 | 124 |
| MS.gene70616.t1 | MTR_5g033430 | 55.682 | 88 | 37 | 2 | 542 | 628 | 26 | 112 | 1.31e-30 | 116 |
| MS.gene70616.t1 | MTR_1g008580 | 34.091 | 176 | 109 | 3 | 455 | 627 | 1 | 172 | 2.97e-30 | 117 |
| MS.gene70616.t1 | MTR_1g008450 | 37.368 | 190 | 110 | 5 | 438 | 624 | 127 | 310 | 6.93e-30 | 120 |
| MS.gene70616.t1 | MTR_3g116410 | 34.247 | 219 | 135 | 6 | 413 | 625 | 59 | 274 | 3.43e-29 | 117 |
| MS.gene70616.t1 | MTR_4g069570 | 34.389 | 221 | 129 | 7 | 413 | 624 | 120 | 333 | 4.33e-29 | 119 |
| MS.gene70616.t1 | MTR_5g033440 | 53.409 | 88 | 39 | 2 | 542 | 628 | 113 | 199 | 5.27e-29 | 114 |
| MS.gene70616.t1 | MTR_5g033440 | 52.273 | 88 | 40 | 2 | 542 | 628 | 26 | 112 | 4.03e-28 | 112 |
| MS.gene70616.t1 | MTR_5g033420 | 54.118 | 85 | 37 | 2 | 542 | 625 | 14 | 97 | 5.83e-28 | 112 |
| MS.gene70616.t1 | MTR_5g033420 | 45.312 | 64 | 35 | 0 | 561 | 624 | 145 | 208 | 2.35e-15 | 76.3 |
| MS.gene70616.t1 | MTR_3g107830 | 32.420 | 219 | 139 | 6 | 413 | 625 | 39 | 254 | 7.06e-28 | 113 |
| MS.gene70616.t1 | MTR_4g069680 | 32.990 | 194 | 118 | 5 | 439 | 625 | 97 | 285 | 1.28e-26 | 110 |
| MS.gene70616.t1 | MTR_5g033450 | 54.217 | 83 | 36 | 2 | 547 | 628 | 223 | 304 | 5.23e-26 | 108 |
| MS.gene70616.t1 | MTR_4g069040 | 30.455 | 220 | 139 | 6 | 413 | 624 | 294 | 507 | 5.47e-26 | 112 |
| MS.gene70616.t1 | MTR_3g116380 | 32.877 | 219 | 137 | 5 | 413 | 625 | 87 | 301 | 8.03e-26 | 108 |
| MS.gene70616.t1 | MTR_5g033410 | 52.381 | 84 | 38 | 2 | 546 | 628 | 315 | 397 | 6.32e-25 | 107 |
| MS.gene70616.t1 | MTR_5g033410 | 47.692 | 65 | 32 | 2 | 547 | 610 | 181 | 244 | 1.27e-11 | 67.4 |
| MS.gene70616.t1 | MTR_4g069550 | 29.864 | 221 | 141 | 6 | 413 | 625 | 247 | 461 | 1.12e-24 | 108 |
| MS.gene70616.t1 | MTR_3g116270 | 28.916 | 249 | 161 | 6 | 383 | 624 | 264 | 503 | 3.17e-23 | 103 |
| MS.gene70616.t1 | MTR_3g116320 | 32.143 | 224 | 110 | 8 | 413 | 615 | 474 | 676 | 1.76e-22 | 102 |
| MS.gene70616.t1 | MTR_4g069520 | 29.091 | 220 | 142 | 6 | 413 | 624 | 493 | 706 | 2.30e-22 | 102 |
| MS.gene70616.t1 | MTR_4g069520 | 29.091 | 220 | 142 | 6 | 413 | 624 | 507 | 720 | 2.99e-22 | 102 |
| MS.gene70616.t1 | MTR_6g086530 | 28.713 | 202 | 135 | 6 | 433 | 628 | 9 | 207 | 5.42e-17 | 80.5 |
| MS.gene70616.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 481 | 624 | 294 | 429 | 4.01e-13 | 72.4 |
| MS.gene70616.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 481 | 624 | 335 | 470 | 5.39e-13 | 72.0 |
| MS.gene70616.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 481 | 624 | 372 | 507 | 6.94e-13 | 72.0 |
| MS.gene70616.t1 | MTR_4g068420 | 29.197 | 137 | 74 | 5 | 493 | 625 | 2 | 119 | 1.88e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70616.t1 | AT1G23760 | 51.987 | 629 | 292 | 7 | 1 | 627 | 1 | 621 | 0.0 | 632 |
| MS.gene70616.t1 | AT1G70370 | 52.229 | 628 | 285 | 8 | 7 | 627 | 6 | 625 | 0.0 | 630 |
| MS.gene70616.t1 | AT1G70370 | 52.229 | 628 | 285 | 8 | 7 | 627 | 6 | 625 | 0.0 | 630 |
| MS.gene70616.t1 | AT1G60390 | 51.535 | 619 | 290 | 5 | 10 | 624 | 8 | 620 | 0.0 | 588 |
| MS.gene70616.t1 | AT5G25610 | 34.921 | 189 | 119 | 3 | 438 | 624 | 203 | 389 | 1.91e-27 | 115 |
| MS.gene70616.t1 | AT1G49320 | 31.551 | 187 | 119 | 4 | 448 | 626 | 94 | 279 | 8.44e-21 | 93.6 |
Find 126 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTGGGACGCGCGTTTA+AGG | 0.171525 | 3.1:+64122533 | MS.gene70616:CDS |
| TGACAATAATAGAGTAAATA+AGG | 0.192990 | 3.1:-64123065 | None:intergenic |
| GCTGCGTCGTTTACGAATTA+TGG | 0.219517 | 3.1:+64122426 | MS.gene70616:CDS |
| TACGGCACCGGTTCAGTTTC+CGG | 0.228326 | 3.1:+64122318 | MS.gene70616:CDS |
| GCGTTTGGATTCAAATCTTA+TGG | 0.236560 | 3.1:+64122513 | MS.gene70616:CDS |
| AACGACACTTTCACTGAATA+TGG | 0.249572 | 3.1:+64122468 | MS.gene70616:CDS |
| TACGGTTCCGGTTCAAATTC+CGG | 0.253560 | 3.1:+64121979 | MS.gene70616:CDS |
| GCTTCATAAACTCTCACTTT+AGG | 0.266040 | 3.1:-64123095 | None:intergenic |
| CTTCATAAACTCTCACTTTA+GGG | 0.270723 | 3.1:-64123094 | None:intergenic |
| TTCACCGGTTACGGTGAATT+AGG | 0.291344 | 3.1:+64122222 | MS.gene70616:CDS |
| CTCAACCTCGAGGATGAAAA+TGG | 0.315748 | 3.1:-64122756 | None:intergenic |
| TAAGCTTTGAAACTACTCTT+TGG | 0.317297 | 3.1:-64122297 | None:intergenic |
| GTGGATTGGTAAAGTGTGTT+TGG | 0.328141 | 3.1:-64121730 | None:intergenic |
| GTTTGGAATAGGAGTATTCT+TGG | 0.339470 | 3.1:-64121486 | None:intergenic |
| GTGTGGAGCAGAGGGTATTA+TGG | 0.345374 | 3.1:-64121681 | None:intergenic |
| CACCGACGTTAGCGCGGTTC+CGG | 0.345400 | 3.1:-64122362 | None:intergenic |
| TTGAGGGATTGGAAGTTTGT+TGG | 0.345994 | 3.1:-64121569 | None:intergenic |
| AAAATGTGAACGGGTCAAAA+AGG | 0.347765 | 3.1:+64122964 | MS.gene70616:CDS |
| GATAGAAGAAATTGAGGGAT+TGG | 0.350407 | 3.1:-64121580 | None:intergenic |
| GGATTCAAATCTTATGGATT+GGG | 0.380176 | 3.1:+64122519 | MS.gene70616:CDS |
| TACGGTAACGATACAAATTC+TGG | 0.381041 | 3.1:+64122105 | MS.gene70616:CDS |
| CAATCAACATTCACCGGTTA+CGG | 0.396679 | 3.1:+64122213 | MS.gene70616:CDS |
| GCTACGGGTAAAACCGCGTT+TGG | 0.402697 | 3.1:+64122498 | MS.gene70616:CDS |
| TGGATTCAAATCTTATGGAT+TGG | 0.403800 | 3.1:+64122518 | MS.gene70616:CDS |
| TGGATTGGTAAAGTGTGTTT+GGG | 0.405593 | 3.1:-64121729 | None:intergenic |
| TGTTCCTAATTCACCGTAAC+CGG | 0.405892 | 3.1:-64122226 | None:intergenic |
| GAAGTTTGAGTCTGATTTGT+TGG | 0.408309 | 3.1:-64121758 | None:intergenic |
| TGGCGAATGAGTGAGGCTTT+AGG | 0.421159 | 3.1:-64121529 | None:intergenic |
| GCTTTAGATAGAAGAAATTG+AGG | 0.426125 | 3.1:-64121586 | None:intergenic |
| AACTTCACAAACTACGGTTC+CGG | 0.437081 | 3.1:+64121967 | MS.gene70616:CDS |
| ATCGGAACCGGAAACTGAAC+CGG | 0.438686 | 3.1:-64122325 | None:intergenic |
| TTTGGAATAGGAGTATTCTT+GGG | 0.441800 | 3.1:-64121485 | None:intergenic |
| GTTGTTTGTGTTTAAACCGT+TGG | 0.449038 | 3.1:-64121857 | None:intergenic |
| AAGAGTAGTTTCAAAGCTTA+CGG | 0.459173 | 3.1:+64122300 | MS.gene70616:CDS |
| TTTGTTTGAAGAGGTTTATG+AGG | 0.460977 | 3.1:-64121639 | None:intergenic |
| TCGAAGGAGCAGAATAAGTA+TGG | 0.462522 | 3.1:-64121703 | None:intergenic |
| GCGTAGTGTTGTGGTGTAAG+AGG | 0.464051 | 3.1:-64121613 | None:intergenic |
| AGTGAGGCTTTAGGAGTGAA+AGG | 0.471322 | 3.1:-64121520 | None:intergenic |
| CTTTAGATAGAAGAAATTGA+GGG | 0.472030 | 3.1:-64121585 | None:intergenic |
| AATTTCGATGATAGAGATAA+GGG | 0.479014 | 3.1:-64122732 | None:intergenic |
| GAATGTTGATTGAAGAATGT+TGG | 0.483388 | 3.1:-64122202 | None:intergenic |
| GTGAGGCTTTAGGAGTGAAA+GGG | 0.487675 | 3.1:-64121519 | None:intergenic |
| TCCGATGCCGGAATTTGAAC+CGG | 0.489824 | 3.1:-64121986 | None:intergenic |
| AGTTTCAAAGCTTACGGCAC+CGG | 0.495602 | 3.1:+64122306 | MS.gene70616:CDS |
| TTCAACAGCTACGCAGAAAA+CGG | 0.500011 | 3.1:+64121928 | MS.gene70616:CDS |
| TCCGGTTCAAATTCCGGCAT+CGG | 0.500822 | 3.1:+64121985 | MS.gene70616:CDS |
| TAAGTATGGTGTGGAGCAGA+GGG | 0.501798 | 3.1:-64121689 | None:intergenic |
| TTATGGAGAATTGATGAGAA+GGG | 0.501836 | 3.1:-64121664 | None:intergenic |
| ACTAACAAAAGTATCGGAAC+CGG | 0.503188 | 3.1:-64122337 | None:intergenic |
| GACAATAATAGAGTAAATAA+GGG | 0.503977 | 3.1:-64123064 | None:intergenic |
| ATTCTTCAATCAACATTCAC+CGG | 0.504853 | 3.1:+64122207 | MS.gene70616:CDS |
| AAAAGAAGCGTTTCACGCGC+GGG | 0.508596 | 3.1:+64122785 | MS.gene70616:CDS |
| AAACAACTGAAAATGTGAAC+GGG | 0.509569 | 3.1:+64122955 | MS.gene70616:CDS |
| TCTAAGTCAAAGATTAATCA+TGG | 0.517107 | 3.1:+64123137 | MS.gene70616:CDS |
| TGATAATTTGTGATTGTTAG+CGG | 0.517556 | 3.1:-64122073 | None:intergenic |
| AAGCCTCACTCATTCGCCAT+TGG | 0.520046 | 3.1:+64121533 | MS.gene70616:CDS |
| TAATTTCGATGATAGAGATA+AGG | 0.525086 | 3.1:-64122733 | None:intergenic |
| AACACAAACTTCACAAACTA+CGG | 0.525394 | 3.1:+64121961 | MS.gene70616:CDS |
| TTTCCTTCCTCAACTAGAAG+TGG | 0.526085 | 3.1:-64123285 | None:intergenic |
| ATGAGGTTTGCGTAGTGTTG+TGG | 0.527522 | 3.1:-64121622 | None:intergenic |
| ATGCGAGAGGGAACCTAGTG+TGG | 0.528725 | 3.1:+64122851 | MS.gene70616:CDS |
| ATTCGTAAACGACGCAGCAC+CGG | 0.530336 | 3.1:-64122421 | None:intergenic |
| ATTGTTAGCGGCGGAGTCGT+AGG | 0.531751 | 3.1:-64122061 | None:intergenic |
| AGAGAGTCGATGTTAAAAGA+AGG | 0.533741 | 3.1:+64122654 | MS.gene70616:CDS |
| TCACATTGATACGTCATCGT+GGG | 0.534023 | 3.1:+64123172 | MS.gene70616:CDS |
| TTCAAAGCGTACAGTTTCAA+CGG | 0.534195 | 3.1:+64122267 | MS.gene70616:CDS |
| TAGGTGGTGAAACCGAGGTT+GGG | 0.534668 | 3.1:-64122042 | None:intergenic |
| CAGGTTTCTATAGCAACCAT+TGG | 0.539976 | 3.1:+64121457 | MS.gene70616:intron |
| GAATATGGAAAAGGAGCTAC+GGG | 0.539985 | 3.1:+64122483 | MS.gene70616:CDS |
| ATTATGGAGAATTGATGAGA+AGG | 0.541035 | 3.1:-64121665 | None:intergenic |
| ACTTTCACTGAATATGGAAA+AGG | 0.542424 | 3.1:+64122474 | MS.gene70616:CDS |
| TTGGCGTTAGGGTCGGGACC+TGG | 0.542561 | 3.1:+64123215 | MS.gene70616:CDS |
| GATGATACGTTTCAAAGCTA+TGG | 0.547081 | 3.1:+64122384 | MS.gene70616:CDS |
| AACTATGGCTCGGCTCGACT+CGG | 0.548192 | 3.1:+64121808 | MS.gene70616:CDS |
| GGTTACGGTGAATTAGGAAC+AGG | 0.550847 | 3.1:+64122228 | MS.gene70616:CDS |
| GTTGGGACCTAATATAGAAA+CGG | 0.552509 | 3.1:-64122922 | None:intergenic |
| TCTCAATCATTCAACAGCTA+CGG | 0.558071 | 3.1:+64122129 | MS.gene70616:CDS |
| CCGGTAACTAACAAAAGTAT+CGG | 0.559070 | 3.1:-64122343 | None:intergenic |
| TGAATATGGAAAAGGAGCTA+CGG | 0.559278 | 3.1:+64122482 | MS.gene70616:CDS |
| AAAATTCTCAAACTATGGCT+CGG | 0.559945 | 3.1:+64121798 | MS.gene70616:CDS |
| AAATTATCATTCTCAAGCTA+CGG | 0.560543 | 3.1:+64122087 | MS.gene70616:CDS |
| TAAAAGAAGCGTTTCACGCG+CGG | 0.568395 | 3.1:+64122784 | MS.gene70616:CDS |
| GAAGCGTTTCACGCGCGGGA+TGG | 0.572632 | 3.1:+64122789 | MS.gene70616:CDS |
| AACAATTTCAGCACAATCAG+TGG | 0.580141 | 3.1:+64122591 | MS.gene70616:CDS |
| GGAGAAACAAAACGGTGCGT+TGG | 0.581963 | 3.1:+64122873 | MS.gene70616:CDS |
| GATTGGAAAAGTCGAAGCAA+TGG | 0.587728 | 3.1:+64122995 | MS.gene70616:CDS |
| ATAAGTATGGTGTGGAGCAG+AGG | 0.589833 | 3.1:-64121690 | None:intergenic |
| AAAACAACTGAAAATGTGAA+CGG | 0.591603 | 3.1:+64122954 | MS.gene70616:CDS |
| TCATCGTGGGGTCCTAAACA+TGG | 0.594368 | 3.1:+64123185 | MS.gene70616:CDS |
| AAGTGTGTTTGGGTGGTCGA+AGG | 0.601561 | 3.1:-64121719 | None:intergenic |
| CTCGTAAATGTACCCAACCT+CGG | 0.603933 | 3.1:+64122030 | MS.gene70616:CDS |
| TGAAGCTGATATTCTTGACG+TGG | 0.604319 | 3.1:+64123112 | MS.gene70616:CDS |
| TATGGTGCAAAATCGAAAGC+CGG | 0.605543 | 3.1:+64122402 | MS.gene70616:CDS |
| CGGTGCGTTGGATCAGCTGA+GGG | 0.613492 | 3.1:+64122885 | MS.gene70616:CDS |
| TGACGTATCAATGTGACAGA+TGG | 0.618564 | 3.1:-64123165 | None:intergenic |
| GTAGGTGGTGAAACCGAGGT+TGG | 0.619572 | 3.1:-64122043 | None:intergenic |
| CTAGTGTGGGAGAAACAAAA+CGG | 0.619596 | 3.1:+64122865 | MS.gene70616:CDS |
| TGCGAGAGGGAACCTAGTGT+GGG | 0.624114 | 3.1:+64122852 | MS.gene70616:CDS |
| GTAAATAGATTTGTAGAACC+AGG | 0.625185 | 3.1:+64122621 | MS.gene70616:CDS |
| ACGTGGACCACTTCTAGTTG+AGG | 0.629765 | 3.1:+64123278 | MS.gene70616:CDS |
| CACATTGATACGTCATCGTG+GGG | 0.632982 | 3.1:+64123173 | MS.gene70616:CDS |
| ACGGTGCGTTGGATCAGCTG+AGG | 0.635487 | 3.1:+64122884 | MS.gene70616:CDS |
| GTCACATTGATACGTCATCG+TGG | 0.637640 | 3.1:+64123171 | MS.gene70616:CDS |
| GGAGCAGAATAAGTATGGTG+TGG | 0.637921 | 3.1:-64121698 | None:intergenic |
| TATGGACAATCGTTTAACGA+AGG | 0.638176 | 3.1:+64122444 | MS.gene70616:CDS |
| TACGGAAAACGTGTTCGTAG+CGG | 0.638765 | 3.1:+64122147 | MS.gene70616:CDS |
| GTTAGCGGCGGAGTCGTAGG+TGG | 0.640286 | 3.1:-64122058 | None:intergenic |
| CGCGCTTAAAGAATGCGAGA+GGG | 0.646475 | 3.1:+64122839 | MS.gene70616:CDS |
| TTAGAGATAAAATGCCTGCA+AGG | 0.646765 | 3.1:+64122700 | MS.gene70616:CDS |
| TACGGTGAATTAGGAACAGG+AGG | 0.647425 | 3.1:+64122231 | MS.gene70616:CDS |
| TCAGGCTCAACTCGTCGCGG+TGG | 0.649482 | 3.1:+64121901 | MS.gene70616:CDS |
| ACGCGCTTAAAGAATGCGAG+AGG | 0.653096 | 3.1:+64122838 | MS.gene70616:CDS |
| GTTCCAATGGCGAATGAGTG+AGG | 0.654041 | 3.1:-64121536 | None:intergenic |
| ATTGGTAAAGTGTGTTTGGG+TGG | 0.654549 | 3.1:-64121726 | None:intergenic |
| TATGGCTCGGCTCGACTCGG+CGG | 0.655706 | 3.1:+64121811 | MS.gene70616:CDS |
| TATATTAGGTCCCAACGTGG+TGG | 0.658022 | 3.1:+64122929 | MS.gene70616:CDS |
| AGAAAGCGACAAGAACAGGA+AGG | 0.661956 | 3.1:-64121276 | None:intergenic |
| GGAAAAGTCGAAGCAATGGA+CGG | 0.666675 | 3.1:+64122999 | MS.gene70616:CDS |
| TTCTATATTAGGTCCCAACG+TGG | 0.667872 | 3.1:+64122926 | MS.gene70616:CDS |
| TATCATCACCGACGTTAGCG+CGG | 0.671074 | 3.1:-64122368 | None:intergenic |
| AGTCGTAGGTGGTGAAACCG+AGG | 0.675434 | 3.1:-64122047 | None:intergenic |
| AGCTCAGGCTCAACTCGTCG+CGG | 0.679160 | 3.1:+64121898 | MS.gene70616:CDS |
| TACCGGAACCGCGCTAACGT+CGG | 0.680954 | 3.1:+64122360 | MS.gene70616:CDS |
| TAATTTGTGATTGTTAGCGG+CGG | 0.683646 | 3.1:-64122070 | None:intergenic |
| AAAGTCGAAGCAATGGACGG+TGG | 0.689713 | 3.1:+64123002 | MS.gene70616:CDS |
| ATAAGATTTGAATCCAAACG+CGG | 0.725665 | 3.1:-64122511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAGTAAGAAATATTTA+AGG | - | chr3.1:64121421-64121440 | None:intergenic | 10.0% |
| !! | AACAAAAAATTCTCAAACTA+TGG | + | chr3.1:64121793-64121812 | MS.gene70616:CDS | 20.0% |
| !! | GACAATAATAGAGTAAATAA+GGG | - | chr3.1:64123067-64123086 | None:intergenic | 20.0% |
| !! | TGACAATAATAGAGTAAATA+AGG | - | chr3.1:64123068-64123087 | None:intergenic | 20.0% |
| !!! | TTTAAGGTATACAACAAAAA+CGG | + | chr3.1:64122549-64122568 | MS.gene70616:CDS | 20.0% |
| ! | AAAACAACTGAAAATGTGAA+CGG | + | chr3.1:64122954-64122973 | MS.gene70616:CDS | 25.0% |
| ! | AAATTATCATTCTCAAGCTA+CGG | + | chr3.1:64122087-64122106 | MS.gene70616:CDS | 25.0% |
| ! | AATTTCGATGATAGAGATAA+GGG | - | chr3.1:64122735-64122754 | None:intergenic | 25.0% |
| ! | ATAACAACTTAGTTAAGGAA+AGG | - | chr3.1:64121380-64121399 | None:intergenic | 25.0% |
| ! | ATTAATCAAATTGCATTGCA+TGG | + | chr3.1:64121352-64121371 | MS.gene70616:intron | 25.0% |
| ! | ATTTAAGGACAATTACATGT+AGG | - | chr3.1:64121406-64121425 | None:intergenic | 25.0% |
| ! | CTTTAGATAGAAGAAATTGA+GGG | - | chr3.1:64121588-64121607 | None:intergenic | 25.0% |
| ! | TAATTTCGATGATAGAGATA+AGG | - | chr3.1:64122736-64122755 | None:intergenic | 25.0% |
| ! | TCTAAGTCAAAGATTAATCA+TGG | + | chr3.1:64123137-64123156 | MS.gene70616:CDS | 25.0% |
| !! | AGTATGAAAATGAGAGTATA+TGG | - | chr3.1:64121330-64121349 | None:intergenic | 25.0% |
| !! | ATTTTGTGGTTTTTCTTACA+TGG | - | chr3.1:64121307-64121326 | None:intergenic | 25.0% |
| !! | TGATAATTTGTGATTGTTAG+CGG | - | chr3.1:64122076-64122095 | None:intergenic | 25.0% |
| !! | TTTTGTATATGAATGAATGC+AGG | + | chr3.1:64121438-64121457 | MS.gene70616:intron | 25.0% |
| !!! | GAATTTTTTGTTTGAGTAGA+CGG | - | chr3.1:64121785-64121804 | None:intergenic | 25.0% |
| AAAATTCTCAAACTATGGCT+CGG | + | chr3.1:64121798-64121817 | MS.gene70616:CDS | 30.0% | |
| AAACAACTGAAAATGTGAAC+GGG | + | chr3.1:64122955-64122974 | MS.gene70616:CDS | 30.0% | |
| AACACAAACTTCACAAACTA+CGG | + | chr3.1:64121961-64121980 | MS.gene70616:CDS | 30.0% | |
| AAGAGTAGTTTCAAAGCTTA+CGG | + | chr3.1:64122300-64122319 | MS.gene70616:CDS | 30.0% | |
| ACTTTCACTGAATATGGAAA+AGG | + | chr3.1:64122474-64122493 | MS.gene70616:CDS | 30.0% | |
| ATAAGATTTGAATCCAAACG+CGG | - | chr3.1:64122514-64122533 | None:intergenic | 30.0% | |
| ATTATGGAGAATTGATGAGA+AGG | - | chr3.1:64121668-64121687 | None:intergenic | 30.0% | |
| ATTCTTCAATCAACATTCAC+CGG | + | chr3.1:64122207-64122226 | MS.gene70616:CDS | 30.0% | |
| CTTCATAAACTCTCACTTTA+GGG | - | chr3.1:64123097-64123116 | None:intergenic | 30.0% | |
| GGACAATAACAACTTAGTTA+AGG | - | chr3.1:64121385-64121404 | None:intergenic | 30.0% | |
| GGATTCAAATCTTATGGATT+GGG | + | chr3.1:64122519-64122538 | MS.gene70616:CDS | 30.0% | |
| GTAAATAGATTTGTAGAACC+AGG | + | chr3.1:64122621-64122640 | MS.gene70616:CDS | 30.0% | |
| TCATTCAAAAACTACTCCAA+CGG | + | chr3.1:64121841-64121860 | MS.gene70616:CDS | 30.0% | |
| TGGATTCAAATCTTATGGAT+TGG | + | chr3.1:64122518-64122537 | MS.gene70616:CDS | 30.0% | |
| TTATGGAGAATTGATGAGAA+GGG | - | chr3.1:64121667-64121686 | None:intergenic | 30.0% | |
| TTTGTTTGAAGAGGTTTATG+AGG | - | chr3.1:64121642-64121661 | None:intergenic | 30.0% | |
| ! | GAATGTTGATTGAAGAATGT+TGG | - | chr3.1:64122205-64122224 | None:intergenic | 30.0% |
| ! | GACTTTTCCGTTTCTATATT+AGG | + | chr3.1:64122915-64122934 | MS.gene70616:CDS | 30.0% |
| ! | GCTTTAGATAGAAGAAATTG+AGG | - | chr3.1:64121589-64121608 | None:intergenic | 30.0% |
| ! | GGCATTTTATCTCTAATATC+TGG | - | chr3.1:64122696-64122715 | None:intergenic | 30.0% |
| !! | ATGAGAGTATATGGATTTTG+TGG | - | chr3.1:64121321-64121340 | None:intergenic | 30.0% |
| !! | GTTTGTCTTTTGTTTGGAAT+AGG | - | chr3.1:64121500-64121519 | None:intergenic | 30.0% |
| !! | TAAGCTTTGAAACTACTCTT+TGG | - | chr3.1:64122300-64122319 | None:intergenic | 30.0% |
| !! | TTTGGAATAGGAGTATTCTT+GGG | - | chr3.1:64121488-64121507 | None:intergenic | 30.0% |
| !! | TTTTTGAGAATGATATGACG+TGG | + | chr3.1:64123261-64123280 | MS.gene70616:CDS | 30.0% |
| !!! | ATTTGTTGGTTTTTGTGGAT+TGG | - | chr3.1:64121747-64121766 | None:intergenic | 30.0% |
| AAAAAGAAAGCGACAAGAAC+AGG | - | chr3.1:64121283-64121302 | None:intergenic | 35.0% | |
| AAAATGTGAACGGGTCAAAA+AGG | + | chr3.1:64122964-64122983 | MS.gene70616:CDS | 35.0% | |
| AACAATTTCAGCACAATCAG+TGG | + | chr3.1:64122591-64122610 | MS.gene70616:CDS | 35.0% | |
| AACGACACTTTCACTGAATA+TGG | + | chr3.1:64122468-64122487 | MS.gene70616:CDS | 35.0% | |
| AGAGAGTCGATGTTAAAAGA+AGG | + | chr3.1:64122654-64122673 | MS.gene70616:CDS | 35.0% | |
| GAAAAATTGAGGTGTGTCAT+TGG | + | chr3.1:64123237-64123256 | MS.gene70616:CDS | 35.0% | |
| GATAGAAGAAATTGAGGGAT+TGG | - | chr3.1:64121583-64121602 | None:intergenic | 35.0% | |
| GATGATACGTTTCAAAGCTA+TGG | + | chr3.1:64122384-64122403 | MS.gene70616:CDS | 35.0% | |
| GCGTTTGGATTCAAATCTTA+TGG | + | chr3.1:64122513-64122532 | MS.gene70616:CDS | 35.0% | |
| GCTTCATAAACTCTCACTTT+AGG | - | chr3.1:64123098-64123117 | None:intergenic | 35.0% | |
| GTTGGGACCTAATATAGAAA+CGG | - | chr3.1:64122925-64122944 | None:intergenic | 35.0% | |
| GTTGTTTGTGTTTAAACCGT+TGG | - | chr3.1:64121860-64121879 | None:intergenic | 35.0% | |
| TACGGTAACGATACAAATTC+TGG | + | chr3.1:64122105-64122124 | MS.gene70616:CDS | 35.0% | |
| TATGGACAATCGTTTAACGA+AGG | + | chr3.1:64122444-64122463 | MS.gene70616:CDS | 35.0% | |
| TCGTTCAAAAAATACAGCTC+AGG | + | chr3.1:64121883-64121902 | MS.gene70616:CDS | 35.0% | |
| TCTCAATCATTCAACAGCTA+CGG | + | chr3.1:64122129-64122148 | MS.gene70616:CDS | 35.0% | |
| TGAATATGGAAAAGGAGCTA+CGG | + | chr3.1:64122482-64122501 | MS.gene70616:CDS | 35.0% | |
| TTAGAGATAAAATGCCTGCA+AGG | + | chr3.1:64122700-64122719 | MS.gene70616:CDS | 35.0% | |
| TTCAAAGCGTACAGTTTCAA+CGG | + | chr3.1:64122267-64122286 | MS.gene70616:CDS | 35.0% | |
| ! | AATTACCATTTTCATCCTCG+AGG | + | chr3.1:64122751-64122770 | MS.gene70616:CDS | 35.0% |
| ! | CCGATACTTTTGTTAGTTAC+CGG | + | chr3.1:64122343-64122362 | MS.gene70616:CDS | 35.0% |
| ! | CCGGTAACTAACAAAAGTAT+CGG | - | chr3.1:64122346-64122365 | None:intergenic | 35.0% |
| ! | GAAAGGGTTTGTCTTTTGTT+TGG | - | chr3.1:64121506-64121525 | None:intergenic | 35.0% |
| ! | GAAGTTTGAGTCTGATTTGT+TGG | - | chr3.1:64121761-64121780 | None:intergenic | 35.0% |
| ! | GACTCTCTGAAAAATTTACC+TGG | - | chr3.1:64122642-64122661 | None:intergenic | 35.0% |
| ! | TAATTTGTGATTGTTAGCGG+CGG | - | chr3.1:64122073-64122092 | None:intergenic | 35.0% |
| ! | TGGAGATTTTTGTGTTCCAA+TGG | - | chr3.1:64121552-64121571 | None:intergenic | 35.0% |
| !! | ACTAACAAAAGTATCGGAAC+CGG | - | chr3.1:64122340-64122359 | None:intergenic | 35.0% |
| !! | AGAAGGGTTTTTGTTTGAAG+AGG | - | chr3.1:64121651-64121670 | None:intergenic | 35.0% |
| !! | GTTTGGAATAGGAGTATTCT+TGG | - | chr3.1:64121489-64121508 | None:intergenic | 35.0% |
| !! | TGGATTGGTAAAGTGTGTTT+GGG | - | chr3.1:64121732-64121751 | None:intergenic | 35.0% |
| !!! | GTCTGATTTGTTGGTTTTTG+TGG | - | chr3.1:64121752-64121771 | None:intergenic | 35.0% |
| !!! | TCCTAAACATGGTGCTTTTT+TGG | + | chr3.1:64123196-64123215 | MS.gene70616:CDS | 35.0% |
| AACTTCACAAACTACGGTTC+CGG | + | chr3.1:64121967-64121986 | MS.gene70616:CDS | 40.0% | |
| ATTGGTAAAGTGTGTTTGGG+TGG | - | chr3.1:64121729-64121748 | None:intergenic | 40.0% | |
| CAGGTTTCTATAGCAACCAT+TGG | + | chr3.1:64121457-64121476 | MS.gene70616:intron | 40.0% | |
| CTAGTGTGGGAGAAACAAAA+CGG | + | chr3.1:64122865-64122884 | MS.gene70616:CDS | 40.0% | |
| GAATATGGAAAAGGAGCTAC+GGG | + | chr3.1:64122483-64122502 | MS.gene70616:CDS | 40.0% | |
| GATTGGAAAAGTCGAAGCAA+TGG | + | chr3.1:64122995-64123014 | MS.gene70616:CDS | 40.0% | |
| TATGGTGCAAAATCGAAAGC+CGG | + | chr3.1:64122402-64122421 | MS.gene70616:CDS | 40.0% | |
| TCAAAAAGGACGGTGATGAT+TGG | + | chr3.1:64122978-64122997 | MS.gene70616:CDS | 40.0% | |
| TCACATTGATACGTCATCGT+GGG | + | chr3.1:64123172-64123191 | MS.gene70616:CDS | 40.0% | |
| TCGAAGGAGCAGAATAAGTA+TGG | - | chr3.1:64121706-64121725 | None:intergenic | 40.0% | |
| TGAAGCTGATATTCTTGACG+TGG | + | chr3.1:64123112-64123131 | MS.gene70616:CDS | 40.0% | |
| TGACGTATCAATGTGACAGA+TGG | - | chr3.1:64123168-64123187 | None:intergenic | 40.0% | |
| TGTTCCTAATTCACCGTAAC+CGG | - | chr3.1:64122229-64122248 | None:intergenic | 40.0% | |
| TTCAACAGCTACGCAGAAAA+CGG | + | chr3.1:64121928-64121947 | MS.gene70616:CDS | 40.0% | |
| TTCTATATTAGGTCCCAACG+TGG | + | chr3.1:64122926-64122945 | MS.gene70616:CDS | 40.0% | |
| TTGAGGGATTGGAAGTTTGT+TGG | - | chr3.1:64121572-64121591 | None:intergenic | 40.0% | |
| ! | CAATCAACATTCACCGGTTA+CGG | + | chr3.1:64122213-64122232 | MS.gene70616:CDS | 40.0% |
| ! | GTATTCTTGGGTTTTGCCAA+TGG | - | chr3.1:64121476-64121495 | None:intergenic | 40.0% |
| ! | TGACACACCTCAATTTTTCC+AGG | - | chr3.1:64123236-64123255 | None:intergenic | 40.0% |
| ! | TTTTATCTCACTCAACCTCG+AGG | - | chr3.1:64122769-64122788 | None:intergenic | 40.0% |
| !! | GCCAAAAAAGCACCATGTTT+AGG | - | chr3.1:64123200-64123219 | None:intergenic | 40.0% |
| !! | GTGGATTGGTAAAGTGTGTT+TGG | - | chr3.1:64121733-64121752 | None:intergenic | 40.0% |
| !!! | ATGGTGCTTTTTTGGCGTTA+GGG | + | chr3.1:64123204-64123223 | MS.gene70616:CDS | 40.0% |
| AAGGGTAAAAACGACCTTGC+AGG | - | chr3.1:64122717-64122736 | None:intergenic | 45.0% | |
| AGAAAGCGACAAGAACAGGA+AGG | - | chr3.1:64121279-64121298 | None:intergenic | 45.0% | |
| AGTTTCAAAGCTTACGGCAC+CGG | + | chr3.1:64122306-64122325 | MS.gene70616:CDS | 45.0% | |
| ATAAGTATGGTGTGGAGCAG+AGG | - | chr3.1:64121693-64121712 | None:intergenic | 45.0% | |
| ATGAGGTTTGCGTAGTGTTG+TGG | - | chr3.1:64121625-64121644 | None:intergenic | 45.0% | |
| CACATTGATACGTCATCGTG+GGG | + | chr3.1:64123173-64123192 | MS.gene70616:CDS | 45.0% | |
| CTCAACCTCGAGGATGAAAA+TGG | - | chr3.1:64122759-64122778 | None:intergenic | 45.0% | |
| CTCGTAAATGTACCCAACCT+CGG | + | chr3.1:64122030-64122049 | MS.gene70616:CDS | 45.0% | |
| GCTGCGTCGTTTACGAATTA+TGG | + | chr3.1:64122426-64122445 | MS.gene70616:CDS | 45.0% | |
| GGAAAAGTCGAAGCAATGGA+CGG | + | chr3.1:64122999-64123018 | MS.gene70616:CDS | 45.0% | |
| GGAGCAGAATAAGTATGGTG+TGG | - | chr3.1:64121701-64121720 | None:intergenic | 45.0% | |
| GGTTACGGTGAATTAGGAAC+AGG | + | chr3.1:64122228-64122247 | MS.gene70616:CDS | 45.0% | |
| GTCACATTGATACGTCATCG+TGG | + | chr3.1:64123171-64123190 | MS.gene70616:CDS | 45.0% | |
| TAAGTATGGTGTGGAGCAGA+GGG | - | chr3.1:64121692-64121711 | None:intergenic | 45.0% | |
| TACGGAAAACGTGTTCGTAG+CGG | + | chr3.1:64122147-64122166 | MS.gene70616:CDS | 45.0% | |
| TACGGTGAATTAGGAACAGG+AGG | + | chr3.1:64122231-64122250 | MS.gene70616:CDS | 45.0% | |
| TACGGTTCCGGTTCAAATTC+CGG | + | chr3.1:64121979-64121998 | MS.gene70616:CDS | 45.0% | |
| TATATTAGGTCCCAACGTGG+TGG | + | chr3.1:64122929-64122948 | MS.gene70616:CDS | 45.0% | |
| TGTGAACGGGTCAAAAAGGA+CGG | + | chr3.1:64122968-64122987 | MS.gene70616:CDS | 45.0% | |
| ! | TTCACCGGTTACGGTGAATT+AGG | + | chr3.1:64122222-64122241 | MS.gene70616:CDS | 45.0% |
| !! | AGTGAGGCTTTAGGAGTGAA+AGG | - | chr3.1:64121523-64121542 | None:intergenic | 45.0% |
| !! | AGTTGTTTTCACCACCACGT+TGG | - | chr3.1:64122943-64122962 | None:intergenic | 45.0% |
| !! | GTGAGGCTTTAGGAGTGAAA+GGG | - | chr3.1:64121522-64121541 | None:intergenic | 45.0% |
| !! | GTTGTTTTCACCACCACGTT+GGG | - | chr3.1:64122942-64122961 | None:intergenic | 45.0% |
| !! | TAAAAGAAGCGTTTCACGCG+CGG | + | chr3.1:64122784-64122803 | MS.gene70616:CDS | 45.0% |
| !!! | CATGGTGCTTTTTTGGCGTT+AGG | + | chr3.1:64123203-64123222 | MS.gene70616:CDS | 45.0% |
| !!! | CGTTTTGTTTCTCCCACACT+AGG | - | chr3.1:64122867-64122886 | None:intergenic | 45.0% |
| !!! | TGCTTTTTTGGCGTTAGGGT+CGG | + | chr3.1:64123208-64123227 | MS.gene70616:CDS | 45.0% |
| AAAGTCGAAGCAATGGACGG+TGG | + | chr3.1:64123002-64123021 | MS.gene70616:CDS | 50.0% | |
| AAGCCTCACTCATTCGCCAT+TGG | + | chr3.1:64121533-64121552 | MS.gene70616:CDS | 50.0% | |
| AAGTGTGTTTGGGTGGTCGA+AGG | - | chr3.1:64121722-64121741 | None:intergenic | 50.0% | |
| ACGCGCTTAAAGAATGCGAG+AGG | + | chr3.1:64122838-64122857 | MS.gene70616:CDS | 50.0% | |
| ATCGGAACCGGAAACTGAAC+CGG | - | chr3.1:64122328-64122347 | None:intergenic | 50.0% | |
| ATTCGTAAACGACGCAGCAC+CGG | - | chr3.1:64122424-64122443 | None:intergenic | 50.0% | |
| CGCGCTTAAAGAATGCGAGA+GGG | + | chr3.1:64122839-64122858 | MS.gene70616:CDS | 50.0% | |
| GCGTAGTGTTGTGGTGTAAG+AGG | - | chr3.1:64121616-64121635 | None:intergenic | 50.0% | |
| GGAGAAACAAAACGGTGCGT+TGG | + | chr3.1:64122873-64122892 | MS.gene70616:CDS | 50.0% | |
| GTCGGGACCTGGAAAAATTG+AGG | + | chr3.1:64123226-64123245 | MS.gene70616:CDS | 50.0% | |
| GTTCCAATGGCGAATGAGTG+AGG | - | chr3.1:64121539-64121558 | None:intergenic | 50.0% | |
| TAGGTGGTGAAACCGAGGTT+GGG | - | chr3.1:64122045-64122064 | None:intergenic | 50.0% | |
| TATCATCACCGACGTTAGCG+CGG | - | chr3.1:64122371-64122390 | None:intergenic | 50.0% | |
| TCATCGTGGGGTCCTAAACA+TGG | + | chr3.1:64123185-64123204 | MS.gene70616:CDS | 50.0% | |
| TCCGATGCCGGAATTTGAAC+CGG | - | chr3.1:64121989-64122008 | None:intergenic | 50.0% | |
| TCCGGTTCAAATTCCGGCAT+CGG | + | chr3.1:64121985-64122004 | MS.gene70616:CDS | 50.0% | |
| TGGCGAATGAGTGAGGCTTT+AGG | - | chr3.1:64121532-64121551 | None:intergenic | 50.0% | |
| !! | AAAAGAAGCGTTTCACGCGC+GGG | + | chr3.1:64122785-64122804 | MS.gene70616:CDS | 50.0% |
| !! | GTGTGGAGCAGAGGGTATTA+TGG | - | chr3.1:64121684-64121703 | None:intergenic | 50.0% |
| !!! | GCTTTTGAAGTCTCCGATGC+CGG | - | chr3.1:64122001-64122020 | None:intergenic | 50.0% |
| !!! | GCTTTTTTGGCGTTAGGGTC+GGG | + | chr3.1:64123209-64123228 | MS.gene70616:CDS | 50.0% |
| AGTCGTAGGTGGTGAAACCG+AGG | - | chr3.1:64122050-64122069 | None:intergenic | 55.0% | |
| ATGCGAGAGGGAACCTAGTG+TGG | + | chr3.1:64122851-64122870 | MS.gene70616:CDS | 55.0% | |
| ATTGTTAGCGGCGGAGTCGT+AGG | - | chr3.1:64122064-64122083 | None:intergenic | 55.0% | |
| GCTACGGGTAAAACCGCGTT+TGG | + | chr3.1:64122498-64122517 | MS.gene70616:CDS | 55.0% | |
| GTAGGTGGTGAAACCGAGGT+TGG | - | chr3.1:64122046-64122065 | None:intergenic | 55.0% | |
| TGCGAGAGGGAACCTAGTGT+GGG | + | chr3.1:64122852-64122871 | MS.gene70616:CDS | 55.0% | |
| ! | AACTATGGCTCGGCTCGACT+CGG | + | chr3.1:64121808-64121827 | MS.gene70616:CDS | 55.0% |
| ! | TGGATTGGGACGCGCGTTTA+AGG | + | chr3.1:64122533-64122552 | MS.gene70616:CDS | 55.0% |
| !! | TACGGCACCGGTTCAGTTTC+CGG | + | chr3.1:64122318-64122337 | MS.gene70616:CDS | 55.0% |
| ACGGTGCGTTGGATCAGCTG+AGG | + | chr3.1:64122884-64122903 | MS.gene70616:CDS | 60.0% | |
| AGCTCAGGCTCAACTCGTCG+CGG | + | chr3.1:64121898-64121917 | MS.gene70616:CDS | 60.0% | |
| CGGTGCGTTGGATCAGCTGA+GGG | + | chr3.1:64122885-64122904 | MS.gene70616:CDS | 60.0% | |
| TACCGGAACCGCGCTAACGT+CGG | + | chr3.1:64122360-64122379 | MS.gene70616:CDS | 60.0% | |
| CACCGACGTTAGCGCGGTTC+CGG | - | chr3.1:64122365-64122384 | None:intergenic | 65.0% | |
| GTTAGCGGCGGAGTCGTAGG+TGG | - | chr3.1:64122061-64122080 | None:intergenic | 65.0% | |
| TCAGGCTCAACTCGTCGCGG+TGG | + | chr3.1:64121901-64121920 | MS.gene70616:CDS | 65.0% | |
| TTGGCGTTAGGGTCGGGACC+TGG | + | chr3.1:64123215-64123234 | MS.gene70616:CDS | 65.0% | |
| ! | GAAGCGTTTCACGCGCGGGA+TGG | + | chr3.1:64122789-64122808 | MS.gene70616:CDS | 65.0% |
| !! | TATGGCTCGGCTCGACTCGG+CGG | + | chr3.1:64121811-64121830 | MS.gene70616:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 64121260 | 64123298 | 64121260 | ID=MS.gene70616 |
| chr3.1 | mRNA | 64121260 | 64123298 | 64121260 | ID=MS.gene70616.t1;Parent=MS.gene70616 |
| chr3.1 | exon | 64121260 | 64121307 | 64121260 | ID=MS.gene70616.t1.exon1;Parent=MS.gene70616.t1 |
| chr3.1 | CDS | 64121260 | 64121307 | 64121260 | ID=cds.MS.gene70616.t1;Parent=MS.gene70616.t1 |
| chr3.1 | exon | 64121460 | 64123298 | 64121460 | ID=MS.gene70616.t1.exon2;Parent=MS.gene70616.t1 |
| chr3.1 | CDS | 64121460 | 64123298 | 64121460 | ID=cds.MS.gene70616.t1;Parent=MS.gene70616.t1 |
| Gene Sequence |
| Protein sequence |
