Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060492.t1 | XP_013444558.1 | 96.1 | 438 | 17 | 0 | 33 | 470 | 115 | 552 | 4.40E-220 | 773.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060492.t1 | Q8LPG9 | 23.5 | 425 | 228 | 13 | 44 | 457 | 321 | 659 | 1.2e-08 | 62.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060492.t1 | A0A072TP08 | 96.1 | 438 | 17 | 0 | 33 | 470 | 115 | 552 | 3.2e-220 | 773.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051067 | MS.gene060492 | 0.801385 | 9.23E-49 | -1.69E-46 |
MS.gene056526 | MS.gene060492 | 0.804358 | 2.24E-49 | -1.69E-46 |
MS.gene058197 | MS.gene060492 | 0.80426 | 2.35E-49 | -1.69E-46 |
MS.gene058198 | MS.gene060492 | 0.801766 | 7.71E-49 | -1.69E-46 |
MS.gene059300 | MS.gene060492 | 0.832398 | 9.67E-56 | -1.69E-46 |
MS.gene060492 | MS.gene065643 | 0.81372 | 2.22E-51 | -1.69E-46 |
MS.gene060492 | MS.gene065674 | 0.805028 | 1.63E-49 | -1.69E-46 |
MS.gene060492 | MS.gene066031 | 0.802958 | 4.38E-49 | -1.69E-46 |
MS.gene060492 | MS.gene067143 | 0.8332 | 6.11E-56 | -1.69E-46 |
MS.gene060492 | MS.gene067144 | 0.828181 | 1.04E-54 | -1.69E-46 |
MS.gene060492 | MS.gene069090 | 0.809636 | 1.72E-50 | -1.69E-46 |
MS.gene060492 | MS.gene072719 | 0.812316 | 4.51E-51 | -1.69E-46 |
MS.gene060492 | MS.gene072954 | 0.821197 | 4.59E-53 | -1.69E-46 |
MS.gene060492 | MS.gene072956 | 0.836955 | 6.91E-57 | -1.69E-46 |
MS.gene060492 | MS.gene072963 | 0.815034 | 1.14E-51 | -1.69E-46 |
MS.gene060492 | MS.gene074367 | 0.812372 | 4.38E-51 | -1.69E-46 |
MS.gene060492 | MS.gene08529 | 0.843765 | 1.15E-58 | -1.69E-46 |
MS.gene060492 | MS.gene22464 | 0.806209 | 9.19E-50 | -1.69E-46 |
MS.gene060492 | MS.gene24735 | 0.813068 | 3.09E-51 | -1.69E-46 |
MS.gene060492 | MS.gene24982 | 0.80825 | 3.40E-50 | -1.69E-46 |
MS.gene060492 | MS.gene26381 | 0.80317 | 3.96E-49 | -1.69E-46 |
MS.gene060492 | MS.gene35715 | 0.832822 | 7.59E-56 | -1.69E-46 |
MS.gene060492 | MS.gene50484 | 0.800869 | 1.18E-48 | -1.69E-46 |
MS.gene060492 | MS.gene55782 | 0.818257 | 2.15E-52 | -1.69E-46 |
MS.gene060492 | MS.gene65451 | 0.801755 | 7.75E-49 | -1.69E-46 |
MS.gene060492 | MS.gene70616 | 0.814699 | 1.35E-51 | -1.69E-46 |
MS.gene060492 | MS.gene71698 | 0.844862 | 5.81E-59 | -1.69E-46 |
MS.gene060492 | MS.gene74272 | 0.800087 | 1.70E-48 | -1.69E-46 |
MS.gene060492 | MS.gene77911 | 0.806012 | 1.01E-49 | -1.69E-46 |
MS.gene060492 | MS.gene80276 | 0.80435 | 2.25E-49 | -1.69E-46 |
MS.gene060492 | MS.gene92988 | 0.85045 | 1.69E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060492.t1 | MTR_8g024540 | 98.718 | 468 | 6 | 0 | 3 | 470 | 85 | 552 | 0.0 | 959 |
MS.gene060492.t1 | MTR_6g033415 | 34.805 | 385 | 179 | 16 | 30 | 404 | 89 | 411 | 1.92e-36 | 139 |
MS.gene060492.t1 | MTR_1g066800 | 29.167 | 384 | 214 | 9 | 30 | 404 | 101 | 435 | 3.28e-35 | 137 |
MS.gene060492.t1 | MTR_1g066800 | 29.427 | 384 | 213 | 11 | 30 | 404 | 106 | 440 | 3.96e-35 | 136 |
MS.gene060492.t1 | MTR_7g100790 | 31.313 | 396 | 211 | 12 | 25 | 404 | 88 | 438 | 5.16e-35 | 136 |
MS.gene060492.t1 | MTR_4g050480 | 44.660 | 206 | 85 | 7 | 44 | 241 | 95 | 279 | 2.39e-34 | 134 |
MS.gene060492.t1 | MTR_4g050480 | 44.660 | 206 | 85 | 7 | 44 | 241 | 96 | 280 | 2.60e-34 | 134 |
MS.gene060492.t1 | MTR_1g095740 | 39.378 | 193 | 99 | 4 | 44 | 232 | 140 | 318 | 5.41e-34 | 134 |
MS.gene060492.t1 | MTR_4g087420 | 30.079 | 379 | 195 | 11 | 44 | 403 | 145 | 472 | 2.55e-31 | 126 |
MS.gene060492.t1 | MTR_1g007920 | 43.961 | 207 | 97 | 6 | 34 | 223 | 111 | 315 | 1.40e-28 | 118 |
MS.gene060492.t1 | MTR_1g007920 | 44.444 | 207 | 96 | 7 | 34 | 223 | 86 | 290 | 1.48e-28 | 117 |
MS.gene060492.t1 | MTR_0019s0070 | 30.685 | 365 | 168 | 11 | 47 | 395 | 119 | 414 | 8.14e-27 | 112 |
MS.gene060492.t1 | MTR_3g104570 | 40.933 | 193 | 88 | 4 | 42 | 223 | 88 | 265 | 8.33e-27 | 112 |
MS.gene060492.t1 | MTR_3g091560 | 37.083 | 240 | 111 | 4 | 32 | 251 | 99 | 318 | 1.15e-26 | 112 |
MS.gene060492.t1 | MTR_4g102840 | 30.663 | 362 | 178 | 10 | 34 | 385 | 74 | 372 | 1.25e-24 | 106 |
MS.gene060492.t1 | MTR_0047s0040 | 36.313 | 179 | 89 | 6 | 44 | 218 | 100 | 257 | 3.00e-23 | 102 |
MS.gene060492.t1 | MTR_2g015370 | 34.426 | 183 | 100 | 5 | 44 | 223 | 62 | 227 | 8.72e-23 | 98.6 |
MS.gene060492.t1 | MTR_1g101330 | 30.878 | 353 | 156 | 11 | 44 | 384 | 114 | 390 | 1.07e-22 | 100 |
MS.gene060492.t1 | MTR_1g103070 | 65.060 | 83 | 26 | 1 | 34 | 113 | 122 | 204 | 2.52e-22 | 99.8 |
MS.gene060492.t1 | MTR_8g014580 | 53.398 | 103 | 34 | 1 | 42 | 144 | 123 | 211 | 1.35e-21 | 97.1 |
MS.gene060492.t1 | MTR_8g102400 | 54.455 | 101 | 39 | 2 | 3 | 103 | 77 | 170 | 2.04e-21 | 96.7 |
MS.gene060492.t1 | MTR_8g017570 | 40.000 | 190 | 88 | 4 | 43 | 223 | 88 | 260 | 1.07e-20 | 94.7 |
MS.gene060492.t1 | MTR_7g114700 | 32.571 | 175 | 99 | 4 | 44 | 218 | 134 | 289 | 4.22e-19 | 89.7 |
MS.gene060492.t1 | MTR_7g114870 | 68.254 | 63 | 20 | 0 | 47 | 109 | 108 | 170 | 1.30e-17 | 84.7 |
MS.gene060492.t1 | MTR_8g074730 | 62.295 | 61 | 23 | 0 | 43 | 103 | 69 | 129 | 2.27e-17 | 79.3 |
MS.gene060492.t1 | MTR_2g100740 | 61.429 | 70 | 27 | 0 | 42 | 111 | 94 | 163 | 6.76e-17 | 82.4 |
MS.gene060492.t1 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 47 | 111 | 101 | 165 | 6.87e-17 | 83.6 |
MS.gene060492.t1 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 47 | 111 | 102 | 166 | 7.33e-17 | 83.6 |
MS.gene060492.t1 | MTR_1g041430 | 48.515 | 101 | 36 | 2 | 1 | 97 | 75 | 163 | 9.16e-17 | 82.8 |
MS.gene060492.t1 | MTR_2g078210 | 29.949 | 197 | 112 | 8 | 45 | 234 | 14 | 191 | 2.39e-16 | 79.3 |
MS.gene060492.t1 | MTR_2g099780 | 37.500 | 200 | 81 | 5 | 43 | 221 | 76 | 252 | 2.52e-16 | 81.3 |
MS.gene060492.t1 | MTR_2g078210 | 29.949 | 197 | 112 | 8 | 45 | 234 | 74 | 251 | 2.61e-16 | 80.1 |
MS.gene060492.t1 | MTR_1g023760 | 52.174 | 69 | 33 | 0 | 47 | 115 | 126 | 194 | 6.27e-14 | 74.7 |
MS.gene060492.t1 | MTR_3g020990 | 36.090 | 133 | 64 | 3 | 58 | 190 | 103 | 214 | 3.32e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060492.t1 | AT1G01110 | 63.514 | 444 | 115 | 16 | 41 | 470 | 117 | 527 | 5.41e-173 | 496 |
MS.gene060492.t1 | AT4G00820 | 61.263 | 475 | 141 | 16 | 7 | 470 | 92 | 534 | 1.20e-167 | 483 |
MS.gene060492.t1 | AT1G01110 | 59.698 | 397 | 113 | 16 | 88 | 470 | 1 | 364 | 4.45e-139 | 404 |
MS.gene060492.t1 | AT4G10640 | 36.250 | 480 | 170 | 15 | 5 | 470 | 66 | 423 | 7.35e-76 | 244 |
MS.gene060492.t1 | AT2G26180 | 43.902 | 205 | 87 | 4 | 37 | 229 | 76 | 264 | 5.10e-36 | 138 |
MS.gene060492.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 8.94e-33 | 130 |
MS.gene060492.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 8.94e-33 | 130 |
MS.gene060492.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 8.94e-33 | 130 |
MS.gene060492.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.54e-31 | 125 |
MS.gene060492.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.54e-31 | 125 |
MS.gene060492.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.54e-31 | 125 |
MS.gene060492.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.54e-31 | 125 |
MS.gene060492.t1 | AT3G49260 | 35.039 | 254 | 113 | 8 | 34 | 249 | 109 | 348 | 6.02e-31 | 125 |
MS.gene060492.t1 | AT3G49260 | 35.039 | 254 | 113 | 8 | 34 | 249 | 109 | 348 | 6.02e-31 | 125 |
MS.gene060492.t1 | AT3G49260 | 35.039 | 254 | 113 | 8 | 34 | 249 | 109 | 348 | 6.02e-31 | 125 |
MS.gene060492.t1 | AT3G49260 | 35.317 | 252 | 116 | 8 | 34 | 249 | 109 | 349 | 3.29e-30 | 122 |
MS.gene060492.t1 | AT1G72670 | 39.423 | 208 | 100 | 6 | 25 | 223 | 73 | 263 | 4.30e-30 | 121 |
MS.gene060492.t1 | AT3G52290 | 37.563 | 197 | 98 | 8 | 32 | 222 | 95 | 272 | 6.57e-29 | 118 |
MS.gene060492.t1 | AT3G59690 | 30.028 | 363 | 165 | 11 | 48 | 403 | 172 | 452 | 7.86e-29 | 119 |
MS.gene060492.t1 | AT3G59690 | 30.028 | 363 | 165 | 11 | 48 | 403 | 172 | 452 | 7.86e-29 | 119 |
MS.gene060492.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 322 | 660 | 7.80e-26 | 111 |
MS.gene060492.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 1.00e-25 | 111 |
MS.gene060492.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 1.00e-25 | 111 |
MS.gene060492.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 1.00e-25 | 111 |
MS.gene060492.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 1.00e-25 | 111 |
MS.gene060492.t1 | AT3G49380 | 41.667 | 144 | 72 | 2 | 15 | 157 | 80 | 212 | 1.86e-24 | 104 |
MS.gene060492.t1 | AT4G14750 | 62.338 | 77 | 29 | 0 | 44 | 120 | 104 | 180 | 7.66e-23 | 100 |
MS.gene060492.t1 | AT4G14750 | 62.338 | 77 | 29 | 0 | 44 | 120 | 163 | 239 | 1.80e-22 | 100 |
MS.gene060492.t1 | AT4G14750 | 62.338 | 77 | 29 | 0 | 44 | 120 | 163 | 239 | 1.85e-22 | 100 |
MS.gene060492.t1 | AT1G17480 | 37.427 | 171 | 80 | 4 | 18 | 188 | 68 | 211 | 3.19e-22 | 98.6 |
MS.gene060492.t1 | AT3G09710 | 31.720 | 186 | 104 | 6 | 42 | 221 | 105 | 273 | 5.67e-22 | 98.6 |
MS.gene060492.t1 | AT3G09710 | 31.771 | 192 | 110 | 6 | 42 | 221 | 105 | 287 | 6.05e-22 | 98.6 |
MS.gene060492.t1 | AT2G26410 | 31.351 | 185 | 110 | 4 | 41 | 221 | 144 | 315 | 1.19e-21 | 98.2 |
MS.gene060492.t1 | AT2G26410 | 31.351 | 185 | 110 | 4 | 41 | 221 | 144 | 315 | 1.19e-21 | 98.2 |
MS.gene060492.t1 | AT5G13460 | 34.973 | 183 | 92 | 4 | 40 | 218 | 106 | 265 | 1.40e-21 | 97.4 |
MS.gene060492.t1 | AT3G16490 | 67.143 | 70 | 23 | 0 | 39 | 108 | 101 | 170 | 7.47e-20 | 91.7 |
MS.gene060492.t1 | AT4G23060 | 28.532 | 361 | 164 | 11 | 32 | 385 | 152 | 425 | 4.45e-19 | 90.1 |
MS.gene060492.t1 | AT4G29150 | 45.082 | 122 | 56 | 2 | 40 | 159 | 126 | 238 | 8.41e-19 | 88.6 |
MS.gene060492.t1 | AT5G07240 | 69.355 | 62 | 19 | 0 | 42 | 103 | 103 | 164 | 2.80e-18 | 87.0 |
MS.gene060492.t1 | AT5G07240 | 69.355 | 62 | 19 | 0 | 42 | 103 | 149 | 210 | 3.39e-18 | 87.0 |
MS.gene060492.t1 | AT5G62070 | 72.414 | 58 | 16 | 0 | 42 | 99 | 114 | 171 | 3.73e-17 | 83.6 |
MS.gene060492.t1 | AT3G51380 | 63.934 | 61 | 22 | 0 | 43 | 103 | 35 | 95 | 1.02e-16 | 76.3 |
MS.gene060492.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.76e-16 | 82.4 |
MS.gene060492.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.76e-16 | 82.4 |
MS.gene060492.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.76e-16 | 82.4 |
MS.gene060492.t1 | AT1G19870 | 56.000 | 75 | 30 | 1 | 49 | 123 | 36 | 107 | 3.98e-16 | 81.3 |
MS.gene060492.t1 | AT1G19870 | 56.000 | 75 | 30 | 1 | 49 | 123 | 219 | 290 | 4.35e-16 | 81.6 |
MS.gene060492.t1 | AT1G51960 | 61.538 | 65 | 25 | 0 | 44 | 108 | 99 | 163 | 8.61e-16 | 79.0 |
MS.gene060492.t1 | AT2G33990 | 26.601 | 203 | 129 | 4 | 44 | 244 | 46 | 230 | 1.25e-15 | 77.4 |
MS.gene060492.t1 | AT3G15050 | 26.087 | 184 | 116 | 3 | 47 | 226 | 52 | 219 | 1.28e-14 | 74.3 |
MS.gene060492.t1 | AT1G74690 | 52.239 | 67 | 32 | 0 | 45 | 111 | 113 | 179 | 3.71e-14 | 75.1 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.62e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.62e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.62e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.73e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.73e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.73e-13 | 73.2 |
MS.gene060492.t1 | AT1G14380 | 49.231 | 65 | 33 | 0 | 47 | 111 | 96 | 160 | 1.88e-13 | 73.2 |
Find 112 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTCTTTCAGAGGTTATT+TGG | 0.184653 | 8.1:-75817558 | MS.gene060492:intron |
GAAATTATGGACATAGTTTA+AGG | 0.213922 | 8.1:-75815356 | MS.gene060492:CDS |
TTGTTCCACCCCTACTATTT+TGG | 0.218545 | 8.1:+75815592 | None:intergenic |
ATCCATCTATCTAGCCATTT+TGG | 0.221443 | 8.1:+75815981 | None:intergenic |
TGTGGATTATATTGATAATT+TGG | 0.238180 | 8.1:+75815834 | None:intergenic |
AGTACAACAAGAAGAGTAAT+TGG | 0.281665 | 8.1:+75815275 | None:intergenic |
CAGTGACACTGCTAGTGTTT+GGG | 0.297942 | 8.1:-75816944 | MS.gene060492:CDS |
CCAACTCCTCCTACATTATA+AGG | 0.303150 | 8.1:+75815384 | None:intergenic |
GGAGTTGGTTATGGAAATTA+TGG | 0.312677 | 8.1:-75815369 | MS.gene060492:CDS |
TAGTGAGAGGTCACAATGTT+AGG | 0.313052 | 8.1:-75817080 | MS.gene060492:CDS |
AAGAGCACTTCGTGCGCTTA+AGG | 0.319760 | 8.1:-75817124 | MS.gene060492:CDS |
TACAAAGCCATGGGAGAATA+GGG | 0.328126 | 8.1:-75815955 | MS.gene060492:CDS |
CTCCATAGATCACACCAAAA+TGG | 0.329388 | 8.1:-75815777 | MS.gene060492:CDS |
GGTTGTGAACGGATCCATTT+TGG | 0.332251 | 8.1:+75815763 | None:intergenic |
CTCATCTCAACCACCGTCTA+AGG | 0.344008 | 8.1:+75815211 | None:intergenic |
GAAGTAGTATTGCAGATGAT+TGG | 0.362742 | 8.1:-75816658 | MS.gene060492:CDS |
CTACAAAGCCATGGGAGAAT+AGG | 0.377195 | 8.1:-75815956 | MS.gene060492:CDS |
TTTGCTCCTAGATATGAATA+AGG | 0.377417 | 8.1:+75815873 | None:intergenic |
TCAGTGACACTGCTAGTGTT+TGG | 0.380570 | 8.1:-75816945 | MS.gene060492:CDS |
TCTCAACCTTATTCATATCT+AGG | 0.385222 | 8.1:-75815879 | MS.gene060492:CDS |
GGAACTTGTACCAAAATAGT+AGG | 0.389102 | 8.1:-75815602 | MS.gene060492:CDS |
AATGTAGGAGGAGTTGGTTA+TGG | 0.413219 | 8.1:-75815378 | MS.gene060492:CDS |
TCGGTTGCTTGCATGTAATT+AGG | 0.413740 | 8.1:+75815519 | None:intergenic |
GGAGTCGATGGCCTTTGCCT+TGG | 0.415194 | 8.1:+75815462 | None:intergenic |
GAGGTTTCGCCTTCTTCAAC+CGG | 0.415789 | 8.1:-75815237 | MS.gene060492:CDS |
CTTGACGATCGGACTTGAAT+AGG | 0.433293 | 8.1:+75815705 | None:intergenic |
TGTCTTTGTGGTTGGTGATG+TGG | 0.435429 | 8.1:+75815816 | None:intergenic |
CCTCTCAAACACCAAGCTTA+AGG | 0.437895 | 8.1:-75815644 | MS.gene060492:CDS |
GACCAAAATGGCTAGATAGA+TGG | 0.442192 | 8.1:-75815983 | MS.gene060492:CDS |
CCTCCTACATTATAAGGATC+AGG | 0.445401 | 8.1:+75815390 | None:intergenic |
CTTCAACCGGTGACCTTAGA+CGG | 0.450676 | 8.1:-75815224 | MS.gene060492:CDS |
AAGTAGTATTGCAGATGATT+GGG | 0.451725 | 8.1:-75816657 | MS.gene060492:CDS |
GAAAAGAAGCAGCAATGAAG+AGG | 0.451997 | 8.1:-75816586 | MS.gene060492:CDS |
GGTACAAGTTCCCATTGTAA+TGG | 0.452470 | 8.1:+75815613 | None:intergenic |
AAACCTGTTGTGAAAATGCT+TGG | 0.456509 | 8.1:+75816549 | None:intergenic |
CCTTATAATGTAGGAGGAGT+TGG | 0.456681 | 8.1:-75815384 | MS.gene060492:CDS |
GGTCTAATTACCATTACAAT+GGG | 0.460991 | 8.1:-75815623 | MS.gene060492:CDS |
CTGCTAGTGTTTGGGATTCG+CGG | 0.462678 | 8.1:-75816936 | MS.gene060492:CDS |
AGAGCACTTCGTGCGCTTAA+GGG | 0.465270 | 8.1:-75817123 | MS.gene060492:CDS |
GTGAAGTAGACCTTATCCTT+TGG | 0.466662 | 8.1:+75816992 | None:intergenic |
ACACACAGTTGAAGAAGTTA+AGG | 0.475450 | 8.1:-75816624 | MS.gene060492:CDS |
ATTTCACAGATTTGGAGAAA+TGG | 0.475842 | 8.1:-75816047 | MS.gene060492:intron |
AATGGTAGGACATCATCAAT+TGG | 0.477140 | 8.1:-75816029 | MS.gene060492:CDS |
ACATTATAAGGATCAGGAGC+AGG | 0.491564 | 8.1:+75815396 | None:intergenic |
AATGTAGCAGCATCACATTA+TGG | 0.491586 | 8.1:-75815312 | MS.gene060492:CDS |
ACATTCACACTCTTGAAGCT+TGG | 0.492207 | 8.1:+75815330 | None:intergenic |
GAACTTGTACCAAAATAGTA+GGG | 0.496333 | 8.1:-75815601 | MS.gene060492:CDS |
ACATGCTCTTGCTGTGGCTA+TGG | 0.501053 | 8.1:-75817687 | MS.gene060492:CDS |
GATCCGGATCTATCCCTCTC+TGG | 0.503639 | 8.1:+75815441 | None:intergenic |
CTAAGAGTTCAAATCATGCT+AGG | 0.504978 | 8.1:-75817607 | MS.gene060492:CDS |
AGTCTGCGAAGGCTCGGATT+CGG | 0.507850 | 8.1:-75815497 | MS.gene060492:CDS |
CTAAGGTCACCGGTTGAAGA+AGG | 0.517640 | 8.1:+75815228 | None:intergenic |
AACTTGAAGAGAGACCAAAA+TGG | 0.518980 | 8.1:-75815995 | MS.gene060492:CDS |
TGCTGGAGACGGAGTAGTGA+TGG | 0.522782 | 8.1:+75815737 | None:intergenic |
GCTCCTGATCCTTATAATGT+AGG | 0.524729 | 8.1:-75815393 | MS.gene060492:CDS |
CTATCCCTCTCTGGAGTCGA+TGG | 0.525156 | 8.1:+75815450 | None:intergenic |
CCTTAAGCTTGGTGTTTGAG+AGG | 0.526162 | 8.1:+75815644 | None:intergenic |
GCTCTTCCCCTATTCTCCCA+TGG | 0.527055 | 8.1:+75815948 | None:intergenic |
AACCTGTTGTGAAAATGCTT+GGG | 0.527631 | 8.1:+75816550 | None:intergenic |
CAACCGAGTCTGCGAAGGCT+CGG | 0.528428 | 8.1:-75815503 | MS.gene060492:CDS |
AGGTCTAATTACCATTACAA+TGG | 0.529005 | 8.1:-75815624 | MS.gene060492:CDS |
GAGTTCTTGACCAAAGGATA+AGG | 0.529710 | 8.1:-75817002 | MS.gene060492:CDS |
AAAAGAAGCAGCAATGAAGA+GGG | 0.530640 | 8.1:-75816585 | MS.gene060492:CDS |
ATCTTCAAGACATTTCAGAT+AGG | 0.531548 | 8.1:-75816912 | MS.gene060492:CDS |
GTGATTCAAACTTCTTTCAG+AGG | 0.534914 | 8.1:-75817566 | MS.gene060492:CDS |
AGCTACTGCTCAAGCTGCTG+TGG | 0.535167 | 8.1:-75817645 | MS.gene060492:CDS |
GAGCACTTCGTGCGCTTAAG+GGG | 0.545080 | 8.1:-75817122 | MS.gene060492:CDS |
AGCAGCATCACATTATGGAT+TGG | 0.546365 | 8.1:-75815307 | MS.gene060492:CDS |
CACAGAGTGCGCCAAGGCAA+AGG | 0.548839 | 8.1:-75815473 | MS.gene060492:CDS |
TCTTGTTGTACTGAGAGTCT+CGG | 0.552055 | 8.1:-75815264 | MS.gene060492:CDS |
TTAACTTCTTCAACTGTGTG+TGG | 0.553478 | 8.1:+75816626 | None:intergenic |
AATCCGAGCCTTCGCAGACT+CGG | 0.554760 | 8.1:+75815500 | None:intergenic |
CACAACGAGGGCTTGACGAT+CGG | 0.555443 | 8.1:+75815694 | None:intergenic |
TACTGAGAGTCTCGGTGGCG+AGG | 0.556933 | 8.1:-75815256 | MS.gene060492:CDS |
CAATGGAATGTCTTTGTGGT+TGG | 0.558998 | 8.1:+75815808 | None:intergenic |
ACTCCAGAGAGGGATAGATC+CGG | 0.559569 | 8.1:-75815444 | MS.gene060492:CDS |
AGTAGGGGTGGAACAAGTAA+TGG | 0.561747 | 8.1:-75815585 | MS.gene060492:CDS |
GAAGCAATGGAATGTCTTTG+TGG | 0.564288 | 8.1:+75815804 | None:intergenic |
CACAGATTTGGAGAAATGGT+AGG | 0.567014 | 8.1:-75816043 | MS.gene060492:intron |
TCTATGGAGCGGTGAAGCAA+TGG | 0.570311 | 8.1:+75815791 | None:intergenic |
CAACCGGTGACCTTAGACGG+TGG | 0.570931 | 8.1:-75815221 | MS.gene060492:CDS |
GAGACGGAGTAGTGATGGAT+TGG | 0.577607 | 8.1:+75815742 | None:intergenic |
TGGTAATTAGACCTTAAGCT+TGG | 0.583935 | 8.1:+75815633 | None:intergenic |
ATAAGGTCTACTTCACATGA+TGG | 0.584681 | 8.1:-75816985 | MS.gene060492:CDS |
CCTGATCCTTATAATGTAGG+AGG | 0.585582 | 8.1:-75815390 | MS.gene060492:CDS |
GATGGATGGCTACAAAGCCA+TGG | 0.586531 | 8.1:-75815965 | MS.gene060492:CDS |
TGTGGCTATGGCTACAGCTG+AGG | 0.587150 | 8.1:-75817675 | MS.gene060492:CDS |
AAGCTGCTGTGGAAGTTGCA+AGG | 0.590980 | 8.1:-75817634 | MS.gene060492:CDS |
TAAGAGTTCAAATCATGCTA+GGG | 0.594458 | 8.1:-75817606 | MS.gene060492:CDS |
TTGTGAAAATGCTTGGGACA+AGG | 0.594968 | 8.1:+75816556 | None:intergenic |
TTGGTGTTTGAGAGGTGTGA+TGG | 0.596650 | 8.1:+75815652 | None:intergenic |
AAGTTGCAAGCTTTAGTGAG+AGG | 0.597297 | 8.1:-75817093 | MS.gene060492:CDS |
TTGTACCAAAATAGTAGGGG+TGG | 0.602042 | 8.1:-75815597 | MS.gene060492:CDS |
AAGCAAGAGTTCTTGACCAA+AGG | 0.602268 | 8.1:-75817008 | MS.gene060492:CDS |
CAACCACCGTCTAAGGTCAC+CGG | 0.606102 | 8.1:+75815218 | None:intergenic |
ATGGATGGCTACAAAGCCAT+GGG | 0.613295 | 8.1:-75815964 | MS.gene060492:CDS |
GCAAGCAACCGAGTCTGCGA+AGG | 0.620241 | 8.1:-75815508 | MS.gene060492:CDS |
CATTATAAGGATCAGGAGCA+GGG | 0.621699 | 8.1:+75815397 | None:intergenic |
AGCAAGCAAAGATGACACTT+AGG | 0.631862 | 8.1:-75817056 | MS.gene060492:CDS |
AACACTAGCAGTGTCACTGA+AGG | 0.637230 | 8.1:+75816948 | None:intergenic |
AAAATGGCTAGATAGATGGA+TGG | 0.637956 | 8.1:-75815979 | MS.gene060492:CDS |
TTCGGTCACAGAGTGCGCCA+AGG | 0.638278 | 8.1:-75815479 | MS.gene060492:CDS |
AAGAGACTCTATTAAGACTG+TGG | 0.640275 | 8.1:-75815913 | MS.gene060492:CDS |
AAGGCCATCGACTCCAGAGA+GGG | 0.644870 | 8.1:-75815454 | MS.gene060492:CDS |
ACAAAGCCATGGGAGAATAG+GGG | 0.653021 | 8.1:-75815954 | MS.gene060492:CDS |
AGTGATGGATTGGTTGTGAA+CGG | 0.660603 | 8.1:+75815752 | None:intergenic |
CTATCTTCTCGAACACAACG+AGG | 0.664998 | 8.1:+75815681 | None:intergenic |
TATCTTCTCGAACACAACGA+GGG | 0.667052 | 8.1:+75815682 | None:intergenic |
AACTTGTACCAAAATAGTAG+GGG | 0.675624 | 8.1:-75815600 | MS.gene060492:CDS |
TGAGAAACATGCTCTTGCTG+TGG | 0.692861 | 8.1:-75817693 | MS.gene060492:CDS |
TGTTGTACTGAGAGTCTCGG+TGG | 0.693541 | 8.1:-75815261 | MS.gene060492:CDS |
AAAGGCCATCGACTCCAGAG+AGG | 0.711647 | 8.1:-75815455 | MS.gene060492:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAGATAGTAAAAACAAA+AGG | + | chr8.1:75815396-75815415 | None:intergenic | 15.0% |
!! | ATTAGATAGTAAAAACAAAA+GGG | + | chr8.1:75815395-75815414 | None:intergenic | 15.0% |
!!! | AGAATTAATTTTGAATTGTT+TGG | - | chr8.1:75817000-75817019 | MS.gene060492:CDS | 15.0% |
!! | AAATTTGATTACAATGATGT+TGG | + | chr8.1:75816462-75816481 | None:intergenic | 20.0% |
!! | AAGAAAATAAAGTGAAAAAG+AGG | + | chr8.1:75816794-75816813 | None:intergenic | 20.0% |
!! | AGAAAATAAAGTGAAAAAGA+GGG | + | chr8.1:75816793-75816812 | None:intergenic | 20.0% |
!! | GGTTAGAAAATTTAATACAT+AGG | + | chr8.1:75816086-75816105 | None:intergenic | 20.0% |
!! | TAACTTTGAATGAATTGATT+GGG | + | chr8.1:75817184-75817203 | None:intergenic | 20.0% |
!! | TTAACTTTGAATGAATTGAT+TGG | + | chr8.1:75817185-75817204 | None:intergenic | 20.0% |
!! | TTAGTAGCAAATATTATGTT+TGG | - | chr8.1:75816506-75816525 | MS.gene060492:intron | 20.0% |
!!! | TATTTTGATGTTCTGTTTAT+AGG | - | chr8.1:75816579-75816598 | MS.gene060492:CDS | 20.0% |
!!! | TGTGGATTATATTGATAATT+TGG | + | chr8.1:75817477-75817496 | None:intergenic | 20.0% |
!!! | TGTTTTTACTATCTAATTCA+TGG | - | chr8.1:75815398-75815417 | MS.gene060492:CDS | 20.0% |
! | AAAGATAGTGAAAAAAGAAG+TGG | - | chr8.1:75815275-75815294 | MS.gene060492:CDS | 25.0% |
! | ATACCAAAAATCAATTGTTG+AGG | + | chr8.1:75817072-75817091 | None:intergenic | 25.0% |
! | ATGAATTGATTGGGTAAAAT+TGG | + | chr8.1:75817175-75817194 | None:intergenic | 25.0% |
! | CTTTATGTTTGACAATATCA+TGG | - | chr8.1:75815877-75815896 | MS.gene060492:CDS | 25.0% |
! | GAAATTATGGACATAGTTTA+AGG | - | chr8.1:75817952-75817971 | MS.gene060492:intron | 25.0% |
!! | AAGCAATTTTCTTAGCTAAT+TGG | - | chr8.1:75817230-75817249 | MS.gene060492:intron | 25.0% |
!! | AATATTTGCTACTAAAAGCA+TGG | + | chr8.1:75816501-75816520 | None:intergenic | 25.0% |
!!! | AAAAAAGAAGGTGGATTTTT+AGG | - | chr8.1:75815485-75815504 | MS.gene060492:CDS | 25.0% |
!!! | ATATTCAACTCACTTTTACA+TGG | - | chr8.1:75817100-75817119 | MS.gene060492:CDS | 25.0% |
!!! | CTTTTTAGTTACAAAAGCAA+CGG | - | chr8.1:75816540-75816559 | MS.gene060492:intron | 25.0% |
!!! | CTTTTTTCACTATCTTTTGT+TGG | + | chr8.1:75815272-75815291 | None:intergenic | 25.0% |
AACAGATCTAATTGCATGTT+TGG | - | chr8.1:75815784-75815803 | MS.gene060492:CDS | 30.0% | |
AACTTCTTTCAGAGGTTATT+TGG | - | chr8.1:75815750-75815769 | MS.gene060492:CDS | 30.0% | |
AACTTGTACCAAAATAGTAG+GGG | - | chr8.1:75817708-75817727 | MS.gene060492:intron | 30.0% | |
AAGTAGTATTGCAGATGATT+GGG | - | chr8.1:75816651-75816670 | MS.gene060492:CDS | 30.0% | |
ACACACCAAGAAAGAAAAAA+CGG | + | chr8.1:75816144-75816163 | None:intergenic | 30.0% | |
AGGTCTAATTACCATTACAA+TGG | - | chr8.1:75817684-75817703 | MS.gene060492:CDS | 30.0% | |
AGTACAACAAGAAGAGTAAT+TGG | + | chr8.1:75818036-75818055 | None:intergenic | 30.0% | |
ATATCACACACTCTTTATCA+AGG | + | chr8.1:75816107-75816126 | None:intergenic | 30.0% | |
ATCTTCAAGACATTTCAGAT+AGG | - | chr8.1:75816396-75816415 | MS.gene060492:intron | 30.0% | |
ATTTCACAGATTTGGAGAAA+TGG | - | chr8.1:75817261-75817280 | MS.gene060492:intron | 30.0% | |
CTAAGAAAATTGCTTGTGTT+TGG | + | chr8.1:75817225-75817244 | None:intergenic | 30.0% | |
CTTTGACAATTTCACAGATT+TGG | - | chr8.1:75817253-75817272 | MS.gene060492:intron | 30.0% | |
GAACTTGTACCAAAATAGTA+GGG | - | chr8.1:75817707-75817726 | MS.gene060492:intron | 30.0% | |
GGTCTAATTACCATTACAAT+GGG | - | chr8.1:75817685-75817704 | MS.gene060492:CDS | 30.0% | |
TAAGAGTTCAAATCATGCTA+GGG | - | chr8.1:75815702-75815721 | MS.gene060492:CDS | 30.0% | |
TACACTCATGAGTAAATGTT+GGG | + | chr8.1:75816935-75816954 | None:intergenic | 30.0% | |
TCAAGAAGAAGATGAAGAAA+AGG | - | chr8.1:75815319-75815338 | MS.gene060492:CDS | 30.0% | |
TCTCAACCTTATTCATATCT+AGG | - | chr8.1:75817429-75817448 | MS.gene060492:intron | 30.0% | |
TGTAGAAGAGAGAAAAAAGA+AGG | - | chr8.1:75815473-75815492 | MS.gene060492:CDS | 30.0% | |
TTGACGAAATCACATTAACA+CGG | + | chr8.1:75816046-75816065 | None:intergenic | 30.0% | |
TTTGCTCCTAGATATGAATA+AGG | + | chr8.1:75817438-75817457 | None:intergenic | 30.0% | |
! | AAGTCTTTTCTTTACTGATC+CGG | + | chr8.1:75817886-75817905 | None:intergenic | 30.0% |
! | AATTGCATGTTTGGAATTAC+TGG | - | chr8.1:75815793-75815812 | MS.gene060492:CDS | 30.0% |
! | ATGTGTTTGAATCTTTTGAG+TGG | - | chr8.1:75816605-75816624 | MS.gene060492:CDS | 30.0% |
! | CAATTTTATTCCTCCAAAAG+TGG | + | chr8.1:75816967-75816986 | None:intergenic | 30.0% |
! | TCTAGGCAGTATTGTAATTT+TGG | + | chr8.1:75816890-75816909 | None:intergenic | 30.0% |
!! | TTGCCTCAACAATTGATTTT+TGG | - | chr8.1:75817066-75817085 | MS.gene060492:CDS | 30.0% |
!!! | AAGTACCGTTTTTTCTTTCT+TGG | - | chr8.1:75816136-75816155 | MS.gene060492:intron | 30.0% |
AAAAGAAGCAGCAATGAAGA+GGG | - | chr8.1:75816723-75816742 | MS.gene060492:intron | 35.0% | |
AAAATGGCTAGATAGATGGA+TGG | - | chr8.1:75817329-75817348 | MS.gene060492:intron | 35.0% | |
AAACCTGTTGTGAAAATGCT+TGG | + | chr8.1:75816762-75816781 | None:intergenic | 35.0% | |
AACCTGTTGTGAAAATGCTT+GGG | + | chr8.1:75816761-75816780 | None:intergenic | 35.0% | |
AACTTGAAGAGAGACCAAAA+TGG | - | chr8.1:75817313-75817332 | MS.gene060492:intron | 35.0% | |
AAGAGACTCTATTAAGACTG+TGG | - | chr8.1:75817395-75817414 | MS.gene060492:intron | 35.0% | |
AATGGTAGGACATCATCAAT+TGG | - | chr8.1:75817279-75817298 | MS.gene060492:intron | 35.0% | |
AATGTAGCAGCATCACATTA+TGG | - | chr8.1:75817996-75818015 | MS.gene060492:intron | 35.0% | |
ACACACAGTTGAAGAAGTTA+AGG | - | chr8.1:75816684-75816703 | MS.gene060492:intron | 35.0% | |
ACATCATGCTTCAACTTTGT+TGG | + | chr8.1:75815556-75815575 | None:intergenic | 35.0% | |
AGAAGAGAGAAAAAAGAAGG+TGG | - | chr8.1:75815476-75815495 | MS.gene060492:CDS | 35.0% | |
ATAAGGTCTACTTCACATGA+TGG | - | chr8.1:75816323-75816342 | MS.gene060492:intron | 35.0% | |
ATTGCTTGTGTTTGGTTATG+CGG | + | chr8.1:75817217-75817236 | None:intergenic | 35.0% | |
CAACTGATCCAAAATCATTG+TGG | + | chr8.1:75815952-75815971 | None:intergenic | 35.0% | |
CTAAGAGTTCAAATCATGCT+AGG | - | chr8.1:75815701-75815720 | MS.gene060492:CDS | 35.0% | |
GAAGTAGTATTGCAGATGAT+TGG | - | chr8.1:75816650-75816669 | MS.gene060492:CDS | 35.0% | |
GAGCTTCAACAAAATTACAC+TGG | + | chr8.1:75815840-75815859 | None:intergenic | 35.0% | |
GGAACTTGTACCAAAATAGT+AGG | - | chr8.1:75817706-75817725 | MS.gene060492:intron | 35.0% | |
GTACACTCATGAGTAAATGT+TGG | + | chr8.1:75816936-75816955 | None:intergenic | 35.0% | |
GTGATTCAAACTTCTTTCAG+AGG | - | chr8.1:75815742-75815761 | MS.gene060492:CDS | 35.0% | |
TCCAAAATCATTGTGGCAAT+TGG | + | chr8.1:75815945-75815964 | None:intergenic | 35.0% | |
TGATGAGTTCGACAAAATCT+AGG | + | chr8.1:75816907-75816926 | None:intergenic | 35.0% | |
TGGTAATTAGACCTTAAGCT+TGG | + | chr8.1:75817678-75817697 | None:intergenic | 35.0% | |
TTAACTTCTTCAACTGTGTG+TGG | + | chr8.1:75816685-75816704 | None:intergenic | 35.0% | |
TTCACTGTTTCATGATTCAC+TGG | + | chr8.1:75815514-75815533 | None:intergenic | 35.0% | |
! | AGATTTTTCCGCAGTGATTT+TGG | + | chr8.1:75816852-75816871 | None:intergenic | 35.0% |
! | ATCCATCTATCTAGCCATTT+TGG | + | chr8.1:75817330-75817349 | None:intergenic | 35.0% |
! | GGAGTTGGTTATGGAAATTA+TGG | - | chr8.1:75817939-75817958 | MS.gene060492:intron | 35.0% |
! | TGAATAGGTCTTGATTTTGC+TGG | + | chr8.1:75817591-75817610 | None:intergenic | 35.0% |
! | TTCTTTTCTCTGTTGCAACA+TGG | + | chr8.1:75816710-75816729 | None:intergenic | 35.0% |
! | TTTTGGATCAGTTGTGAGTT+TGG | - | chr8.1:75815958-75815977 | MS.gene060492:CDS | 35.0% |
!! | ATCCATTTTGGTGTGATCTA+TGG | + | chr8.1:75817536-75817555 | None:intergenic | 35.0% |
!!! | TTGTTTTGACAGTCAAGAGA+AGG | - | chr8.1:75816628-75816647 | MS.gene060492:CDS | 35.0% |
AACTCACCGTCAATCCAAAT+AGG | + | chr8.1:75816827-75816846 | None:intergenic | 40.0% | |
AAGCAAGAGTTCTTGACCAA+AGG | - | chr8.1:75816300-75816319 | MS.gene060492:intron | 40.0% | |
ACATTATAAGGATCAGGAGC+AGG | + | chr8.1:75817915-75817934 | None:intergenic | 40.0% | |
ACATTCACACTCTTGAAGCT+TGG | + | chr8.1:75817981-75818000 | None:intergenic | 40.0% | |
AGCAAGCAAAGATGACACTT+AGG | - | chr8.1:75816252-75816271 | MS.gene060492:intron | 40.0% | |
AGCAGCATCACATTATGGAT+TGG | - | chr8.1:75818001-75818020 | MS.gene060492:intron | 40.0% | |
AGTCTGCCTATTTGGATTGA+CGG | - | chr8.1:75816818-75816837 | MS.gene060492:intron | 40.0% | |
CAATGGAATGTCTTTGTGGT+TGG | + | chr8.1:75817503-75817522 | None:intergenic | 40.0% | |
CACAATGTTCAACCGTGATT+TGG | - | chr8.1:75815987-75816006 | MS.gene060492:CDS | 40.0% | |
CACAGATTTGGAGAAATGGT+AGG | - | chr8.1:75817265-75817284 | MS.gene060492:intron | 40.0% | |
CATTATAAGGATCAGGAGCA+GGG | + | chr8.1:75817914-75817933 | None:intergenic | 40.0% | |
CCAACTCCTCCTACATTATA+AGG | + | chr8.1:75817927-75817946 | None:intergenic | 40.0% | |
CCTCCTACATTATAAGGATC+AGG | + | chr8.1:75817921-75817940 | None:intergenic | 40.0% | |
CCTGATCCTTATAATGTAGG+AGG | - | chr8.1:75817918-75817937 | MS.gene060492:intron | 40.0% | |
CCTTATAATGTAGGAGGAGT+TGG | - | chr8.1:75817924-75817943 | MS.gene060492:intron | 40.0% | |
CTCCATAGATCACACCAAAA+TGG | - | chr8.1:75817531-75817550 | MS.gene060492:intron | 40.0% | |
CTGGAAGTTTGACGAAATCA+CGG | - | chr8.1:75815812-75815831 | MS.gene060492:CDS | 40.0% | |
GAAAAGAAGCAGCAATGAAG+AGG | - | chr8.1:75816722-75816741 | MS.gene060492:intron | 40.0% | |
GAAGCAATGGAATGTCTTTG+TGG | + | chr8.1:75817507-75817526 | None:intergenic | 40.0% | |
GAATTGTTTGGATCTTCTCG+AGG | - | chr8.1:75817012-75817031 | MS.gene060492:CDS | 40.0% | |
GACCAAAATGGCTAGATAGA+TGG | - | chr8.1:75817325-75817344 | MS.gene060492:intron | 40.0% | |
GAGTTCTTGACCAAAGGATA+AGG | - | chr8.1:75816306-75816325 | MS.gene060492:intron | 40.0% | |
GCTCCTGATCCTTATAATGT+AGG | - | chr8.1:75817915-75817934 | MS.gene060492:intron | 40.0% | |
GGAAGAAAGGTAGTAGTTCA+TGG | - | chr8.1:75815216-75815235 | MS.gene060492:CDS | 40.0% | |
GGTACAAGTTCCCATTGTAA+TGG | + | chr8.1:75817698-75817717 | None:intergenic | 40.0% | |
GTGAAGTAGACCTTATCCTT+TGG | + | chr8.1:75816319-75816338 | None:intergenic | 40.0% | |
TACAAAGCCATGGGAGAATA+GGG | - | chr8.1:75817353-75817372 | MS.gene060492:intron | 40.0% | |
TAGTGAGAGGTCACAATGTT+AGG | - | chr8.1:75816228-75816247 | MS.gene060492:intron | 40.0% | |
TATCTTCTCGAACACAACGA+GGG | + | chr8.1:75817629-75817648 | None:intergenic | 40.0% | |
TCGGTTGCTTGCATGTAATT+AGG | + | chr8.1:75817792-75817811 | None:intergenic | 40.0% | |
TCTTGTTGAGTCTGCCTATT+TGG | - | chr8.1:75816810-75816829 | MS.gene060492:intron | 40.0% | |
TGAGTTTGCCAAAATCACTG+CGG | - | chr8.1:75816841-75816860 | MS.gene060492:intron | 40.0% | |
TGTTGTTAGTGCTACAAGTG+TGG | - | chr8.1:75815573-75815592 | MS.gene060492:CDS | 40.0% | |
TTGTACCAAAATAGTAGGGG+TGG | - | chr8.1:75817711-75817730 | MS.gene060492:intron | 40.0% | |
TTGTGAAAATGCTTGGGACA+AGG | + | chr8.1:75816755-75816774 | None:intergenic | 40.0% | |
! | AAGTTGCAAGCTTTAGTGAG+AGG | - | chr8.1:75816215-75816234 | MS.gene060492:intron | 40.0% |
! | AATGTAGGAGGAGTTGGTTA+TGG | - | chr8.1:75817930-75817949 | MS.gene060492:intron | 40.0% |
! | GCCAATTGCCACAATGATTT+TGG | - | chr8.1:75815941-75815960 | MS.gene060492:CDS | 40.0% |
! | GCGTAGTTTTTGCCAAATCA+CGG | + | chr8.1:75816002-75816021 | None:intergenic | 40.0% |
! | TCTTGTTGTACTGAGAGTCT+CGG | - | chr8.1:75818044-75818063 | MS.gene060492:intron | 40.0% |
! | TGTACGTGTGTTTCCACTTT+TGG | - | chr8.1:75816951-75816970 | MS.gene060492:CDS | 40.0% |
! | TTGTTCCACCCCTACTATTT+TGG | + | chr8.1:75817719-75817738 | None:intergenic | 40.0% |
!! | AGTGATGGATTGGTTGTGAA+CGG | + | chr8.1:75817559-75817578 | None:intergenic | 40.0% |
!! | TTTTGGTGTGATCTATGGAG+CGG | + | chr8.1:75817531-75817550 | None:intergenic | 40.0% |
AAGTGCTCTTCTTGCCTTCA+AGG | + | chr8.1:75816174-75816193 | None:intergenic | 45.0% | |
ACAAAGCCATGGGAGAATAG+GGG | - | chr8.1:75817354-75817373 | MS.gene060492:intron | 45.0% | |
AGTAGGGGTGGAACAAGTAA+TGG | - | chr8.1:75817723-75817742 | MS.gene060492:intron | 45.0% | |
ATGGATGGCTACAAAGCCAT+GGG | - | chr8.1:75817344-75817363 | MS.gene060492:intron | 45.0% | |
CAGTGACACTGCTAGTGTTT+GGG | - | chr8.1:75816364-75816383 | MS.gene060492:intron | 45.0% | |
CCTCTCAAACACCAAGCTTA+AGG | - | chr8.1:75817664-75817683 | MS.gene060492:CDS | 45.0% | |
CTACAAAGCCATGGGAGAAT+AGG | - | chr8.1:75817352-75817371 | MS.gene060492:intron | 45.0% | |
CTATCTTCTCGAACACAACG+AGG | + | chr8.1:75817630-75817649 | None:intergenic | 45.0% | |
CTTGACGATCGGACTTGAAT+AGG | + | chr8.1:75817606-75817625 | None:intergenic | 45.0% | |
GGTGTGTGTTTGAACCTTGA+AGG | - | chr8.1:75816157-75816176 | MS.gene060492:intron | 45.0% | |
TCAGTGACACTGCTAGTGTT+TGG | - | chr8.1:75816363-75816382 | MS.gene060492:intron | 45.0% | |
TGAGAAACATGCTCTTGCTG+TGG | - | chr8.1:75815615-75815634 | MS.gene060492:CDS | 45.0% | |
TGGATCTTCTCGAGGAGAAT+TGG | - | chr8.1:75817020-75817039 | MS.gene060492:CDS | 45.0% | |
! | AACACTAGCAGTGTCACTGA+AGG | + | chr8.1:75816363-75816382 | None:intergenic | 45.0% |
! | GGTCTTGATTTTGCTGGAGA+CGG | + | chr8.1:75817585-75817604 | None:intergenic | 45.0% |
! | GGTTGTGAACGGATCCATTT+TGG | + | chr8.1:75817548-75817567 | None:intergenic | 45.0% |
! | GTCCCAAGCATTTTCACAAC+AGG | - | chr8.1:75816756-75816775 | MS.gene060492:intron | 45.0% |
! | TTGGTGTTTGAGAGGTGTGA+TGG | + | chr8.1:75817659-75817678 | None:intergenic | 45.0% |
!! | ACGTGTGTTTCCACTTTTGG+AGG | - | chr8.1:75816954-75816973 | MS.gene060492:CDS | 45.0% |
!! | CCTTAAGCTTGGTGTTTGAG+AGG | + | chr8.1:75817667-75817686 | None:intergenic | 45.0% |
!! | TGTCTTTGTGGTTGGTGATG+TGG | + | chr8.1:75817495-75817514 | None:intergenic | 45.0% |
AAGCTGCTGTGGAAGTTGCA+AGG | - | chr8.1:75815674-75815693 | MS.gene060492:CDS | 50.0% | |
ACTCCAGAGAGGGATAGATC+CGG | - | chr8.1:75817864-75817883 | MS.gene060492:intron | 50.0% | |
CTTCAACCGGTGACCTTAGA+CGG | - | chr8.1:75818084-75818103 | MS.gene060492:intron | 50.0% | |
GAGGTTTCGCCTTCTTCAAC+CGG | - | chr8.1:75818071-75818090 | MS.gene060492:intron | 50.0% | |
GATGGATGGCTACAAAGCCA+TGG | - | chr8.1:75817343-75817362 | MS.gene060492:intron | 50.0% | |
GTGCTACAAGTGTGGCTTCA+AGG | - | chr8.1:75815581-75815600 | MS.gene060492:CDS | 50.0% | |
TCTATGGAGCGGTGAAGCAA+TGG | + | chr8.1:75817520-75817539 | None:intergenic | 50.0% | |
TGTGGCTTCAAGGACAGATC+AGG | - | chr8.1:75815591-75815610 | MS.gene060492:CDS | 50.0% | |
TGTTGTACTGAGAGTCTCGG+TGG | - | chr8.1:75818047-75818066 | MS.gene060492:intron | 50.0% | |
! | ACATGCTCTTGCTGTGGCTA+TGG | - | chr8.1:75815621-75815640 | MS.gene060492:CDS | 50.0% |
! | AGAGCACTTCGTGCGCTTAA+GGG | - | chr8.1:75816185-75816204 | MS.gene060492:intron | 50.0% |
! | CTAAGGTCACCGGTTGAAGA+AGG | + | chr8.1:75818083-75818102 | None:intergenic | 50.0% |
! | CTGCTAGTGTTTGGGATTCG+CGG | - | chr8.1:75816372-75816391 | MS.gene060492:intron | 50.0% |
!! | AAGAGCACTTCGTGCGCTTA+AGG | - | chr8.1:75816184-75816203 | MS.gene060492:intron | 50.0% |
!! | GAGACGGAGTAGTGATGGAT+TGG | + | chr8.1:75817569-75817588 | None:intergenic | 50.0% |
AATCCGAGCCTTCGCAGACT+CGG | + | chr8.1:75817811-75817830 | None:intergenic | 55.0% | |
AGCTACTGCTCAAGCTGCTG+TGG | - | chr8.1:75815663-75815682 | MS.gene060492:CDS | 55.0% | |
AGTCTGCGAAGGCTCGGATT+CGG | - | chr8.1:75817811-75817830 | MS.gene060492:intron | 55.0% | |
CACAACGAGGGCTTGACGAT+CGG | + | chr8.1:75817617-75817636 | None:intergenic | 55.0% | |
GAGCACTTCGTGCGCTTAAG+GGG | - | chr8.1:75816186-75816205 | MS.gene060492:intron | 55.0% | |
GATCCGGATCTATCCCTCTC+TGG | + | chr8.1:75817870-75817889 | None:intergenic | 55.0% | |
GCTCTTCCCCTATTCTCCCA+TGG | + | chr8.1:75817363-75817382 | None:intergenic | 55.0% | |
TGCTGGAGACGGAGTAGTGA+TGG | + | chr8.1:75817574-75817593 | None:intergenic | 55.0% | |
TGTGGCTATGGCTACAGCTG+AGG | - | chr8.1:75815633-75815652 | MS.gene060492:CDS | 55.0% | |
! | CAACCACCGTCTAAGGTCAC+CGG | + | chr8.1:75818093-75818112 | None:intergenic | 55.0% |
!! | AAAGGCCATCGACTCCAGAG+AGG | - | chr8.1:75817853-75817872 | MS.gene060492:intron | 55.0% |
!! | AAGGCCATCGACTCCAGAGA+GGG | - | chr8.1:75817854-75817873 | MS.gene060492:intron | 55.0% |
!! | CTATCCCTCTCTGGAGTCGA+TGG | + | chr8.1:75817861-75817880 | None:intergenic | 55.0% |
CAACCGAGTCTGCGAAGGCT+CGG | - | chr8.1:75817805-75817824 | MS.gene060492:intron | 60.0% | |
CAACCGGTGACCTTAGACGG+TGG | - | chr8.1:75818087-75818106 | MS.gene060492:intron | 60.0% | |
CACAGAGTGCGCCAAGGCAA+AGG | - | chr8.1:75817835-75817854 | MS.gene060492:intron | 60.0% | |
GCAAGCAACCGAGTCTGCGA+AGG | - | chr8.1:75817800-75817819 | MS.gene060492:intron | 60.0% | |
GGAGTCGATGGCCTTTGCCT+TGG | + | chr8.1:75817849-75817868 | None:intergenic | 60.0% | |
TACTGAGAGTCTCGGTGGCG+AGG | - | chr8.1:75818052-75818071 | MS.gene060492:intron | 60.0% | |
TTCGGTCACAGAGTGCGCCA+AGG | - | chr8.1:75817829-75817848 | MS.gene060492:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 75815212 | 75818118 | 75815212 | ID=MS.gene060492 |
chr8.1 | mRNA | 75815212 | 75818118 | 75815212 | ID=MS.gene060492.t1;Parent=MS.gene060492 |
chr8.1 | exon | 75818106 | 75818118 | 75818106 | ID=MS.gene060492.t1.exon1;Parent=MS.gene060492.t1 |
chr8.1 | CDS | 75818106 | 75818118 | 75818106 | ID=cds.MS.gene060492.t1;Parent=MS.gene060492.t1 |
chr8.1 | exon | 75817559 | 75817722 | 75817559 | ID=MS.gene060492.t1.exon2;Parent=MS.gene060492.t1 |
chr8.1 | CDS | 75817559 | 75817722 | 75817559 | ID=cds.MS.gene060492.t1;Parent=MS.gene060492.t1 |
chr8.1 | exon | 75816903 | 75817151 | 75816903 | ID=MS.gene060492.t1.exon3;Parent=MS.gene060492.t1 |
chr8.1 | CDS | 75816903 | 75817151 | 75816903 | ID=cds.MS.gene060492.t1;Parent=MS.gene060492.t1 |
chr8.1 | exon | 75816553 | 75816690 | 75816553 | ID=MS.gene060492.t1.exon4;Parent=MS.gene060492.t1 |
chr8.1 | CDS | 75816553 | 75816690 | 75816553 | ID=cds.MS.gene060492.t1;Parent=MS.gene060492.t1 |
chr8.1 | exon | 75815212 | 75816060 | 75815212 | ID=MS.gene060492.t1.exon5;Parent=MS.gene060492.t1 |
chr8.1 | CDS | 75815212 | 75816060 | 75815212 | ID=cds.MS.gene060492.t1;Parent=MS.gene060492.t1 |
Gene Sequence |
Protein sequence |