AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72232.t1 MTR_6g087040 97.451 510 13 0 1 510 1 510 0.0 1016
MS.gene72232.t1 MTR_6g088375 97.451 510 13 0 1 510 1 510 0.0 1016
MS.gene72232.t1 MTR_8g102860 76.861 497 112 1 13 506 13 509 0.0 792
MS.gene72232.t1 MTR_8g102860 76.586 457 104 1 53 506 1 457 0.0 721
MS.gene72232.t1 MTR_0204s0020 58.418 493 201 3 8 499 3 492 0.0 614
MS.gene72232.t1 MTR_0204s0020 58.012 493 200 4 8 499 3 489 0.0 604
MS.gene72232.t1 MTR_7g091690 58.483 501 203 4 1 499 1 498 0.0 597
MS.gene72232.t1 MTR_5g094760 56.917 506 213 4 1 504 1 503 0.0 593
MS.gene72232.t1 MTR_0204s0040 55.419 489 216 2 14 502 17 503 0.0 587
MS.gene72232.t1 MTR_4g116770 55.419 489 216 2 14 502 213 699 0.0 585
MS.gene72232.t1 MTR_4g116790 55.000 500 221 3 3 502 6 501 0.0 575
MS.gene72232.t1 MTR_5g006070 57.114 492 204 6 18 504 14 503 0.0 563
MS.gene72232.t1 MTR_3g008160 53.550 493 226 3 18 508 15 506 0.0 531
MS.gene72232.t1 MTR_1g038630 52.953 508 231 5 1 505 1 503 0.0 524
MS.gene72232.t1 MTR_5g006070 56.455 457 192 6 53 504 1 455 0.0 517
MS.gene72232.t1 MTR_1g104750 50.600 500 240 5 1 497 1 496 1.92e-177 508
MS.gene72232.t1 MTR_1g104780 53.162 506 228 6 1 502 1 501 6.31e-177 508
MS.gene72232.t1 MTR_5g082540 52.567 487 226 4 18 501 15 499 1.32e-176 506
MS.gene72232.t1 MTR_0009s0370 52.236 492 229 4 18 504 13 503 2.10e-175 504
MS.gene72232.t1 MTR_1g104770 50.499 501 240 6 1 497 1 497 3.23e-175 503
MS.gene72232.t1 MTR_3g093010 52.242 513 232 7 1 505 1 508 1.41e-173 499
MS.gene72232.t1 MTR_5g041550 51.650 515 238 6 1 509 1 510 3.02e-173 498
MS.gene72232.t1 MTR_3g023480 51.509 497 231 5 15 504 10 503 6.17e-173 497
MS.gene72232.t1 MTR_4g091370 53.226 496 227 3 18 509 15 509 1.01e-171 494
MS.gene72232.t1 MTR_3g008160 53.275 458 211 3 53 508 1 457 4.08e-170 488
MS.gene72232.t1 MTR_3g008170 50.304 493 237 5 21 506 18 509 5.10e-170 490
MS.gene72232.t1 MTR_1g038600 50.099 507 229 6 1 505 1 485 9.89e-167 481
MS.gene72232.t1 MTR_4g090600 53.144 493 226 4 18 506 15 506 2.26e-160 465
MS.gene72232.t1 MTR_3g007910 48.444 514 225 7 1 510 1 478 3.31e-160 464
MS.gene72232.t1 MTR_3g074390 46.562 509 263 8 1 503 1 506 8.72e-159 461
MS.gene72232.t1 MTR_3g074410 45.168 507 270 8 1 503 1 503 3.83e-157 457
MS.gene72232.t1 MTR_3g074270 46.813 502 240 7 1 500 1 477 1.62e-155 452
MS.gene72232.t1 MTR_4g116790 54.945 364 160 3 3 366 6 365 3.07e-149 432
MS.gene72232.t1 MTR_3g093060 49.443 449 220 4 53 495 1 448 1.87e-145 425
MS.gene72232.t1 MTR_3g074380 46.341 369 193 5 1 367 1 366 1.03e-109 331
MS.gene72232.t1 MTR_3g074370 42.405 316 176 6 191 502 20 333 8.52e-88 273
MS.gene72232.t1 MTR_3g074340 42.089 316 177 6 191 502 20 333 1.20e-87 273
MS.gene72232.t1 MTR_3g074320 42.089 316 177 6 191 502 20 333 2.61e-87 272
MS.gene72232.t1 MTR_3g074400 35.824 455 233 11 53 483 1 420 4.88e-76 246
MS.gene72232.t1 MTR_6g088450 26.514 479 310 12 13 478 50 499 1.14e-52 186
MS.gene72232.t1 MTR_8g103500 26.096 502 337 11 21 510 13 492 2.90e-52 185
MS.gene72232.t1 MTR_4g072030 28.106 491 303 13 28 493 26 491 6.33e-50 179
MS.gene72232.t1 MTR_7g005910 30.705 482 299 14 25 497 32 487 2.44e-49 177
MS.gene72232.t1 MTR_7g446340 27.615 478 310 12 25 492 54 505 3.30e-48 174
MS.gene72232.t1 MTR_6g007340 27.615 478 310 12 25 492 54 505 3.30e-48 174
MS.gene72232.t1 MTR_1g116660 29.508 488 313 14 25 504 34 498 4.28e-48 174
MS.gene72232.t1 MTR_1g116650 31.120 482 285 12 25 497 77 520 8.27e-48 174
MS.gene72232.t1 MTR_3g084110 28.713 505 319 14 16 508 13 488 1.13e-47 172
MS.gene72232.t1 MTR_6g018790 29.512 471 298 11 19 485 98 538 4.66e-47 172
MS.gene72232.t1 MTR_2g013310 26.141 482 322 10 19 491 46 502 1.31e-46 170
MS.gene72232.t1 MTR_5g096000 48.128 187 74 2 1 187 1 164 1.80e-46 164
MS.gene72232.t1 MTR_5g096000 49.254 134 68 0 377 510 176 309 1.95e-32 126
MS.gene72232.t1 MTR_3g116240 27.329 483 302 11 28 485 29 487 3.03e-46 169
MS.gene72232.t1 MTR_4g077740 29.025 472 287 11 34 485 53 496 3.19e-46 169
MS.gene72232.t1 MTR_4g069500 24.547 497 334 9 28 504 31 506 1.02e-45 167
MS.gene72232.t1 MTR_5g075300 26.884 491 315 9 21 489 14 482 4.57e-45 165
MS.gene72232.t1 MTR_2g013310 28.718 390 264 8 111 491 45 429 5.53e-45 164
MS.gene72232.t1 MTR_4g069500 26.150 413 285 6 111 504 45 456 6.09e-45 164
MS.gene72232.t1 MTR_8g077890 28.671 429 282 7 92 498 65 491 6.96e-45 165
MS.gene72232.t1 MTR_7g082270 27.692 455 301 8 32 485 71 498 8.45e-45 165
MS.gene72232.t1 MTR_7g082270 28.715 397 256 7 32 428 71 440 3.14e-41 154
MS.gene72232.t1 MTR_6g087910 29.024 379 252 6 111 485 117 482 7.23e-41 154
MS.gene72232.t1 MTR_4g013205 28.760 379 253 7 111 485 103 468 8.56e-41 153
MS.gene72232.t1 MTR_5g077580 26.449 552 279 16 35 492 35 553 1.04e-40 154
MS.gene72232.t1 MTR_1g022315 27.561 410 283 7 86 490 89 489 7.86e-40 150
MS.gene72232.t1 MTR_1g022315 27.318 399 276 7 97 490 1 390 3.27e-39 147
MS.gene72232.t1 MTR_2g026160 32.267 344 198 9 25 355 26 347 3.40e-39 150
MS.gene72232.t1 MTR_8g077310 26.609 466 305 10 26 485 47 481 7.25e-39 148
MS.gene72232.t1 MTR_3g074330 49.383 162 71 3 1 155 1 158 1.17e-38 139
MS.gene72232.t1 MTR_3g074360 49.383 162 71 3 1 155 1 158 1.17e-38 139
MS.gene72232.t1 MTR_8g077310 27.342 395 270 8 97 485 1 384 3.95e-38 144
MS.gene72232.t1 MTR_5g020270 27.737 411 280 8 86 490 90 489 4.04e-38 146
MS.gene72232.t1 MTR_2g048720 31.361 338 203 7 35 365 35 350 5.11e-38 147
MS.gene72232.t1 MTR_3g074310 48.765 162 72 3 1 155 1 158 6.26e-38 137
MS.gene72232.t1 MTR_3g080240 28.283 396 267 10 95 485 144 527 9.04e-38 145
MS.gene72232.t1 MTR_5g020270 27.500 400 273 8 97 490 1 389 2.01e-37 142
MS.gene72232.t1 MTR_2g049020 29.275 345 216 7 35 371 35 359 6.71e-37 144
MS.gene72232.t1 MTR_8g077300 26.652 469 303 11 25 485 38 473 7.33e-37 142
MS.gene72232.t1 MTR_7g113960 29.584 409 258 12 86 485 67 454 1.14e-36 142
MS.gene72232.t1 MTR_1g038620 42.767 159 73 2 206 364 50 190 9.48e-36 132
MS.gene72232.t1 MTR_7g094450 25.581 473 310 9 19 485 33 469 1.23e-35 139
MS.gene72232.t1 MTR_7g113970 29.469 414 254 12 86 485 102 491 6.10e-35 137
MS.gene72232.t1 MTR_5g019870 27.152 453 292 9 81 509 50 488 1.18e-34 136
MS.gene72232.t1 MTR_4g118610 29.657 408 262 10 86 485 92 482 1.48e-33 133
MS.gene72232.t1 MTR_5g020270 26.923 416 256 9 86 490 90 468 7.13e-33 130
MS.gene72232.t1 MTR_0064s0040 44.203 138 65 1 18 155 16 141 1.96e-31 119
MS.gene72232.t1 MTR_7g094110 26.588 425 282 10 67 485 71 471 2.11e-31 127
MS.gene72232.t1 MTR_4g064820 28.726 369 224 9 26 376 96 443 8.91e-30 122
MS.gene72232.t1 MTR_2g020710 27.340 406 272 9 87 485 1 390 1.73e-29 120
MS.gene72232.t1 MTR_2g020710 27.696 408 270 10 86 485 89 479 2.24e-29 121
MS.gene72232.t1 MTR_2g026140 29.429 333 188 10 36 355 34 332 1.38e-28 119
MS.gene72232.t1 MTR_8g077310 28.819 288 192 6 86 370 87 364 7.12e-28 115
MS.gene72232.t1 MTR_4g069500 23.585 318 224 5 205 504 1 317 2.39e-26 110
MS.gene72232.t1 MTR_7g113960 30.576 278 169 9 86 355 67 328 8.76e-26 109
MS.gene72232.t1 MTR_7g094110 24.944 449 281 11 42 485 54 451 5.86e-25 107
MS.gene72232.t1 MTR_4g118610 28.909 339 216 10 86 416 92 413 5.50e-22 99.0
MS.gene72232.t1 MTR_3g116060 31.795 195 122 3 77 263 31 222 1.32e-21 99.0
MS.gene72232.t1 MTR_3g116060 27.686 242 155 6 260 489 484 717 2.07e-12 70.1
MS.gene72232.t1 MTR_7g113970 27.761 335 207 11 86 406 102 415 1.70e-21 97.1
MS.gene72232.t1 MTR_8g073100 28.302 212 144 3 79 282 39 250 2.09e-20 95.1
MS.gene72232.t1 MTR_8g073100 28.444 225 141 6 278 489 488 705 6.61e-11 65.5
MS.gene72232.t1 MTR_5g024740 27.615 239 152 4 26 262 4 223 4.35e-20 94.4
MS.gene72232.t1 MTR_2g020710 26.409 337 225 9 86 415 89 409 1.06e-19 91.7
MS.gene72232.t1 MTR_2g020710 26.844 339 223 10 86 416 89 410 1.22e-19 91.7
MS.gene72232.t1 MTR_5g044910 29.944 177 123 1 87 262 47 223 1.37e-19 92.8
MS.gene72232.t1 MTR_1g114280 35.065 154 79 3 350 501 21 155 2.44e-19 85.5
MS.gene72232.t1 MTR_2g020710 28.938 273 173 8 86 351 89 347 2.85e-19 90.1
MS.gene72232.t1 MTR_3g118530 32.353 170 114 1 95 263 55 224 1.17e-18 89.7
MS.gene72232.t1 MTR_3g118530 32.353 170 114 1 95 263 55 224 2.59e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72232.t1 AT1G77210 70.833 504 147 0 1 504 1 504 0.0 758
MS.gene72232.t1 AT1G77210 70.833 504 147 0 1 504 1 504 0.0 758
MS.gene72232.t1 AT4G02050 58.964 502 203 3 1 501 1 500 0.0 624
MS.gene72232.t1 AT4G02050 58.964 502 203 3 1 501 1 500 0.0 624
MS.gene72232.t1 AT5G26340 56.496 508 213 6 1 504 1 504 0.0 565
MS.gene72232.t1 AT3G19940 51.587 504 240 3 1 502 1 502 0.0 537
MS.gene72232.t1 AT1G50310 51.683 505 239 4 1 502 1 503 0.0 528
MS.gene72232.t1 AT1G11260 52.632 513 235 5 1 509 1 509 0.0 523
MS.gene72232.t1 AT1G77210 69.143 350 108 0 155 504 6 355 0.0 516
MS.gene72232.t1 AT5G23270 53.707 499 224 6 1 495 1 496 6.24e-179 513
MS.gene72232.t1 AT3G19930 51.287 505 238 5 1 502 1 500 1.30e-177 509
MS.gene72232.t1 AT3G19930 51.287 505 238 5 1 502 1 500 1.30e-177 509
MS.gene72232.t1 AT4G21480 54.115 486 218 4 18 500 15 498 1.08e-174 501
MS.gene72232.t1 AT5G26250 48.671 489 246 4 18 504 14 499 4.13e-164 475
MS.gene72232.t1 AT3G05960 47.082 497 260 3 14 509 9 503 1.78e-162 471
MS.gene72232.t1 AT5G61520 46.421 489 254 4 21 503 19 505 3.00e-156 455
MS.gene72232.t1 AT1G34580 44.423 511 270 8 1 503 1 505 6.65e-148 433
MS.gene72232.t1 AT1G07340 46.407 487 255 6 18 501 15 498 8.44e-148 433
MS.gene72232.t1 AT5G61520 45.633 458 241 4 52 503 2 457 5.34e-141 414
MS.gene72232.t1 AT1G34580 44.227 459 244 7 53 503 1 455 1.38e-132 392
MS.gene72232.t1 AT1G50310 49.858 351 172 3 155 502 11 360 9.77e-121 359
MS.gene72232.t1 AT2G16130 29.363 487 301 9 28 492 27 492 1.76e-56 196
MS.gene72232.t1 AT2G16120 28.747 487 304 9 28 492 27 492 2.61e-55 193
MS.gene72232.t1 AT4G36670 29.637 496 301 11 30 503 21 490 9.81e-54 189
MS.gene72232.t1 AT2G18480 30.786 471 282 12 40 489 36 483 1.90e-53 188
MS.gene72232.t1 AT3G18830 27.634 503 320 12 28 509 37 516 2.07e-53 189
MS.gene72232.t1 AT5G59250 29.389 507 308 14 3 485 72 552 1.14e-45 168
MS.gene72232.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.91e-45 168
MS.gene72232.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.91e-45 168
MS.gene72232.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.91e-45 168
MS.gene72232.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.24e-45 166
MS.gene72232.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.24e-45 166
MS.gene72232.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.24e-45 166
MS.gene72232.t1 AT5G16150 28.330 473 305 9 19 487 98 540 6.20e-45 166
MS.gene72232.t1 AT5G16150 28.330 473 305 9 19 487 98 540 6.20e-45 166
MS.gene72232.t1 AT5G16150 28.330 473 305 9 19 487 98 540 6.20e-45 166
MS.gene72232.t1 AT2G20780 28.112 498 314 16 13 497 42 508 4.64e-44 163
MS.gene72232.t1 AT2G43330 29.289 478 303 10 25 492 30 482 1.27e-43 162
MS.gene72232.t1 AT2G20780 30.476 420 268 14 91 497 42 450 5.16e-42 156
MS.gene72232.t1 AT1G08930 29.371 429 249 13 86 492 98 494 5.54e-42 157
MS.gene72232.t1 AT1G08930 29.371 429 249 13 86 492 98 494 5.54e-42 157
MS.gene72232.t1 AT1G75220 28.362 409 280 6 86 490 88 487 1.50e-40 152
MS.gene72232.t1 AT3G03090 27.935 494 308 10 12 485 33 498 1.53e-40 153
MS.gene72232.t1 AT1G05030 30.097 412 270 11 82 487 64 463 5.02e-40 151
MS.gene72232.t1 AT2G48020 28.501 407 267 7 86 485 68 457 5.96e-40 150
MS.gene72232.t1 AT2G48020 28.501 407 267 7 86 485 68 457 5.96e-40 150
MS.gene72232.t1 AT1G05030 28.788 462 292 13 32 487 85 515 6.11e-40 152
MS.gene72232.t1 AT1G19450 28.851 409 278 6 86 490 89 488 7.27e-40 151
MS.gene72232.t1 AT3G05400 29.216 421 258 13 86 491 66 461 6.98e-39 147
MS.gene72232.t1 AT1G08900 28.395 405 270 8 86 485 23 412 4.50e-38 144
MS.gene72232.t1 AT1G08900 28.395 405 270 8 86 485 57 446 9.39e-38 144
MS.gene72232.t1 AT1G08900 28.395 405 270 8 86 485 65 454 9.84e-38 144
MS.gene72232.t1 AT1G08900 28.395 405 270 8 86 485 65 454 9.84e-38 144
MS.gene72232.t1 AT1G67300 27.297 381 259 7 111 485 118 486 4.35e-37 143
MS.gene72232.t1 AT3G05155 26.895 409 269 9 86 485 67 454 5.60e-37 142
MS.gene72232.t1 AT5G27360 28.157 483 285 13 19 485 28 464 9.40e-37 142
MS.gene72232.t1 AT3G05400 30.750 400 227 15 117 491 67 441 1.01e-36 141
MS.gene72232.t1 AT1G67300 27.353 340 233 6 111 448 118 445 1.51e-36 141
MS.gene72232.t1 AT1G67300 27.353 340 233 6 111 448 118 445 1.51e-36 141
MS.gene72232.t1 AT4G04760 30.184 434 270 10 68 492 2 411 1.98e-36 140
MS.gene72232.t1 AT1G30220 29.494 356 224 9 7 355 10 345 2.22e-36 142
MS.gene72232.t1 AT1G79820 26.596 376 265 5 111 485 121 486 2.30e-36 141
MS.gene72232.t1 AT1G79820 26.596 376 265 5 111 485 121 486 2.30e-36 141
MS.gene72232.t1 AT3G05150 28.501 407 268 8 86 485 75 465 2.57e-36 141
MS.gene72232.t1 AT5G27350 27.347 490 280 12 19 485 24 460 2.57e-36 140
MS.gene72232.t1 AT5G27360 28.157 483 285 13 19 485 76 512 2.63e-36 141
MS.gene72232.t1 AT3G05150 28.501 407 268 8 86 485 75 465 3.33e-36 140
MS.gene72232.t1 AT3G05150 28.501 407 268 8 86 485 75 465 3.33e-36 140
MS.gene72232.t1 AT4G04750 29.016 386 258 8 111 492 145 518 3.39e-36 141
MS.gene72232.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene72232.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene72232.t1 AT1G67300 27.297 381 258 7 111 485 118 485 5.00e-36 140
MS.gene72232.t1 AT1G67300 27.297 381 258 7 111 485 118 485 5.00e-36 140
MS.gene72232.t1 AT1G54730 27.228 404 276 8 86 485 72 461 6.32e-36 139
MS.gene72232.t1 AT4G04760 30.184 434 270 10 68 492 61 470 7.01e-36 139
MS.gene72232.t1 AT5G18840 29.902 408 261 10 86 485 84 474 1.76e-35 138
MS.gene72232.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.22e-35 135
MS.gene72232.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.22e-35 135
MS.gene72232.t1 AT1G08890 28.747 407 266 10 86 485 67 456 4.44e-35 137
MS.gene72232.t1 AT1G67300 27.273 319 220 5 111 427 118 426 6.06e-35 136
MS.gene72232.t1 AT1G67300 27.273 319 220 5 111 427 118 426 6.06e-35 136
MS.gene72232.t1 AT1G79820 26.462 325 229 4 111 435 121 435 1.17e-34 135
MS.gene72232.t1 AT2G35740 27.493 371 228 9 25 381 25 368 1.37e-34 137
MS.gene72232.t1 AT3G05160 28.537 410 259 12 88 485 14 401 1.32e-33 132
MS.gene72232.t1 AT3G05160 28.537 410 259 12 88 485 14 401 1.32e-33 132
MS.gene72232.t1 AT3G05165 28.900 391 236 12 111 485 95 459 2.00e-33 132
MS.gene72232.t1 AT3G05165 28.900 391 236 12 111 485 95 459 2.00e-33 132
MS.gene72232.t1 AT3G05165 28.900 391 236 12 111 485 95 459 2.00e-33 132
MS.gene72232.t1 AT3G05160 28.537 410 259 12 88 485 63 450 2.01e-33 132
MS.gene72232.t1 AT1G08920 26.456 412 269 10 86 485 72 461 8.86e-33 130
MS.gene72232.t1 AT4G04760 29.561 433 269 11 68 491 61 466 3.62e-32 129
MS.gene72232.t1 AT1G08900 29.167 360 235 8 86 440 65 409 4.53e-32 128
MS.gene72232.t1 AT1G08920 26.014 419 269 10 86 485 72 468 9.85e-32 127
MS.gene72232.t1 AT1G54730 26.389 360 247 8 86 441 72 417 5.65e-31 125
MS.gene72232.t1 AT1G54730 25.495 404 262 8 86 485 72 440 4.23e-29 120
MS.gene72232.t1 AT3G20460 27.427 412 265 11 86 485 93 482 4.26e-28 117
MS.gene72232.t1 AT1G08920 26.087 368 238 10 86 441 72 417 8.24e-28 116
MS.gene72232.t1 AT3G05165 29.254 335 195 12 111 429 95 403 8.73e-28 117
MS.gene72232.t1 AT3G05165 29.254 335 195 12 111 429 95 403 1.24e-27 115
MS.gene72232.t1 AT3G05165 29.254 335 195 12 111 429 95 403 1.24e-27 115
MS.gene72232.t1 AT2G48020 29.412 289 183 6 86 367 68 342 5.20e-27 112
MS.gene72232.t1 AT3G05155 26.978 278 176 7 86 355 67 325 8.45e-25 105
MS.gene72232.t1 AT2G48020 29.643 280 169 6 86 355 68 329 8.52e-25 105
MS.gene72232.t1 AT3G51490 29.707 239 149 5 26 263 4 224 1.18e-24 108
MS.gene72232.t1 AT3G51490 34.483 174 112 2 91 263 2 174 1.23e-24 108
MS.gene72232.t1 AT1G54730 25.672 335 231 8 86 416 72 392 1.28e-24 106
MS.gene72232.t1 AT1G54730 25.672 335 231 8 86 416 72 392 1.28e-24 106
MS.gene72232.t1 AT3G51490 29.707 239 149 5 26 263 4 224 1.41e-24 108
MS.gene72232.t1 AT1G54730 24.444 360 233 8 86 441 72 396 3.25e-24 105
MS.gene72232.t1 AT1G79820 24.202 376 226 5 111 485 121 438 1.12e-23 103
MS.gene72232.t1 AT5G27360 26.667 420 246 13 19 422 28 401 2.49e-23 102
MS.gene72232.t1 AT1G54730 26.007 273 188 5 86 355 72 333 2.95e-23 101
MS.gene72232.t1 AT5G17010 24.335 489 272 13 12 485 30 435 1.12e-21 98.2
MS.gene72232.t1 AT1G79820 24.862 362 209 6 127 485 75 376 2.06e-21 96.7
MS.gene72232.t1 AT1G54730 25.498 251 176 4 86 333 72 314 1.02e-20 93.6
MS.gene72232.t1 AT1G54730 25.498 251 176 4 86 333 72 314 1.02e-20 93.6
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.04e-20 95.5
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.46e-20 95.1
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.46e-20 95.1
MS.gene72232.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.46e-20 95.1
MS.gene72232.t1 AT1G54730 25.100 251 177 4 86 333 72 314 6.47e-20 92.0
MS.gene72232.t1 AT1G20840 29.688 192 127 2 80 263 31 222 1.31e-18 89.7
MS.gene72232.t1 AT1G20840 29.688 192 127 2 80 263 31 222 1.31e-18 89.7

Find 97 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAACTTGCTTGGTTTC+TGG 0.107517 6.3:-81665361 None:intergenic
ACGAGACTGTTTGGTGTTTC+TGG 0.129924 6.3:-81663998 None:intergenic
GCAAGAAGATTCCGTATTTA+AGG 0.184615 6.3:-81665288 None:intergenic
GGATATGATCTTGGTGTTTC+AGG 0.205684 6.3:+81662221 MS.gene72232:CDS
GCACTTGGCGGGGCTCTATT+TGG 0.226102 6.3:+81662200 MS.gene72232:CDS
TCTTTCTCAAAAGGAGATTC+TGG 0.236300 6.3:-81664147 None:intergenic
CTTGGAGTTGGTATTGGATT+TGG 0.262672 6.3:+81663004 MS.gene72232:CDS
ATCATTGGACGTATTCTTCT+TGG 0.273716 6.3:+81662986 MS.gene72232:CDS
ATTGCTAACCTTGTGAATTA+TGG 0.277757 6.3:+81663884 MS.gene72232:CDS
TTCCTAAACAAGTTGTTAAC+TGG 0.278012 6.3:-81663856 None:intergenic
GATCAGCATTGCTATATTCT+TGG 0.280820 6.3:-81662966 None:intergenic
TGCTTCCTCTCATACACATT+TGG 0.294387 6.3:-81662752 None:intergenic
CCAATTGTTTGGAAAATAAC+AGG 0.316014 6.3:-81664253 None:intergenic
ATCTTCTGTTTGAGAATCAT+TGG 0.334480 6.3:+81665395 MS.gene72232:CDS
TGTTTGAGAATCATTGGTTT+TGG 0.335335 6.3:+81665401 MS.gene72232:CDS
TACACTCATCTCAATGGCTT+TGG 0.339050 6.3:+81664336 MS.gene72232:CDS
CTTTATGAGCATAAGATAAC+TGG 0.354982 6.3:+81662149 MS.gene72232:CDS
GCAGATGACCTTATCTCTAA+TGG 0.355097 6.3:-81665190 None:intergenic
GCTCTATTTGGATATGATCT+TGG 0.356283 6.3:+81662212 MS.gene72232:CDS
CCAGCATTTCAACAACTAAC+TGG 0.358134 6.3:+81664205 MS.gene72232:CDS
GAAGATCTTGGGGTCCCTTA+GGG 0.359127 6.3:+81665143 MS.gene72232:CDS
GATTGCCACAGCTATAGTTT+TGG 0.362236 6.3:+81665033 MS.gene72232:intron
ATGGCTTTGGTTGACAAGTT+TGG 0.363390 6.3:+81664349 MS.gene72232:CDS
GGAAGATCTTGGGGTCCCTT+AGG 0.366556 6.3:+81665142 MS.gene72232:CDS
CAGAGCCAAATCCAATTGTT+TGG 0.371830 6.3:-81664264 None:intergenic
TTGGGGTCCCTTAGGGTGGT+TGG 0.373657 6.3:+81665150 MS.gene72232:CDS
ATTCTTCTTGGAGTTGGTAT+TGG 0.373658 6.3:+81662998 MS.gene72232:CDS
GCTGCTCTCGTGTCCACATT+TGG 0.375160 6.3:+81662851 MS.gene72232:CDS
CCTTGTTCAACGAGACTGTT+TGG 0.377508 6.3:-81664007 None:intergenic
TTCCAGTTAACAACTTGTTT+AGG 0.382778 6.3:+81663854 MS.gene72232:CDS
GCTTCCTCTCATACACATTT+GGG 0.384808 6.3:-81662751 None:intergenic
TCCTCTATATCTTTCAGAAA+TGG 0.385342 6.3:+81663796 MS.gene72232:CDS
AGTAGACAAAGCAGCTCATA+AGG 0.387984 6.3:-81665330 None:intergenic
CTCTTCAATTGGAACTTGCT+TGG 0.389604 6.3:-81665368 None:intergenic
TACTGAGAAAATTCATCCTT+GGG 0.394596 6.3:+81663907 MS.gene72232:CDS
GCATTATTGGAGCACTTGGC+GGG 0.395827 6.3:+81662189 MS.gene72232:CDS
GAGGTCTATTCTTTCTCAAA+AGG 0.398721 6.3:-81664156 None:intergenic
CAAACAATTGGATTTGGCTC+TGG 0.401668 6.3:+81664265 MS.gene72232:CDS
GTAGTGTTAGAAAAGATTAG+AGG 0.410753 6.3:+81664049 MS.gene72232:CDS
AGAAGATAAATCTCTTCAAT+TGG 0.412850 6.3:-81665379 None:intergenic
GATGGAAAACAACTGTCATT+TGG 0.414524 6.3:+81665070 MS.gene72232:CDS
CCGATGAACATGAATGTTGC+TGG 0.414552 6.3:-81663962 None:intergenic
TTTGGCATATGGAAGATCTT+GGG 0.420424 6.3:+81665132 MS.gene72232:CDS
TGCATTATTGGAGCACTTGG+CGG 0.427531 6.3:+81662188 MS.gene72232:CDS
AATATAGCAATGCTGATCAT+TGG 0.436846 6.3:+81662971 MS.gene72232:CDS
CCAGTTAGTTGTTGAAATGC+TGG 0.437664 6.3:-81664205 None:intergenic
AACTCTTTCCATTAGAGATA+AGG 0.443050 6.3:+81665182 MS.gene72232:CDS
GGACGTATTCTTCTTGGAGT+TGG 0.452238 6.3:+81662992 MS.gene72232:CDS
TCACTTTGCCACCTTAAATA+CGG 0.453634 6.3:+81665277 MS.gene72232:CDS
GTACTGAGAAAATTCATCCT+TGG 0.465348 6.3:+81663906 MS.gene72232:CDS
GCCATTTCTGAAAGATATAG+AGG 0.470895 6.3:-81663797 None:intergenic
AATAGACCTCAATTCATCAT+TGG 0.473706 6.3:+81664169 MS.gene72232:CDS
CTACTCTTCCTTCATCGATT+CGG 0.476748 6.3:-81664030 None:intergenic
TGGGGATGGAGGTTATCTCT+AGG 0.477162 6.3:+81663926 MS.gene72232:CDS
TCTTGCATTATTGGAGCACT+TGG 0.482722 6.3:+81662185 MS.gene72232:CDS
TCTTGCTACACTCATCTCAA+TGG 0.483416 6.3:+81664330 MS.gene72232:CDS
AGGAAAGCTAGTATCTTAGT+TGG 0.486632 6.3:+81662902 MS.gene72232:CDS
AGAATTTGATGATCTTATTG+AGG 0.508732 6.3:+81664090 MS.gene72232:CDS
ATAAAGATGAGCCCTCTTGA+GGG 0.508927 6.3:-81662132 None:intergenic
GATCTTGGGGTCCCTTAGGG+TGG 0.511703 6.3:+81665146 MS.gene72232:CDS
TTGGCATATGGAAGATCTTG+GGG 0.514199 6.3:+81665133 MS.gene72232:CDS
GAACAAGGCCGAATCGATGA+AGG 0.514991 6.3:+81664022 MS.gene72232:CDS
CTCAAAAGGAGATTCTGGAA+TGG 0.515001 6.3:-81664142 None:intergenic
AGAAAATTCATCCTTGGGGA+TGG 0.536487 6.3:+81663912 MS.gene72232:CDS
CATTATTGGAGCACTTGGCG+GGG 0.537160 6.3:+81662190 MS.gene72232:CDS
TTTAGCTTATGCTTGTGTCT+CGG 0.537950 6.3:-81665455 None:intergenic
CCAGCAACATTCATGTTCAT+CGG 0.541413 6.3:+81663962 MS.gene72232:CDS
CATAAAGATGAGCCCTCTTG+AGG 0.543236 6.3:-81662133 None:intergenic
CTTTGGTTGACAAGTTTGGT+AGG 0.544568 6.3:+81664353 MS.gene72232:CDS
TTCTATGAGGAAATCATCCA+TGG 0.546928 6.3:-81662723 None:intergenic
AAGTTGTTAACTGGAAGAGT+TGG 0.551156 6.3:-81663847 None:intergenic
TATTGTCAAGGACGAAAACA+AGG 0.557245 6.3:+81665429 MS.gene72232:CDS
ACTAGGAACCAACCACCCTA+AGG 0.558058 6.3:-81665158 None:intergenic
AAAAGTTAGGGGAAAATGGC+AGG 0.558336 6.3:+81662086 None:intergenic
TCTAATGGAAAGAGTTCACT+AGG 0.569504 6.3:-81665175 None:intergenic
CCAAACAGTCTCGTTGAACA+AGG 0.574070 6.3:+81664007 MS.gene72232:CDS
CACAGGTGGTGTAACTTCCA+TGG 0.581024 6.3:+81662706 MS.gene72232:intron
ATTGCACCAATGATGAATTG+AGG 0.586290 6.3:-81664175 None:intergenic
AAATTCATCCTTGGGGATGG+AGG 0.588295 6.3:+81663915 MS.gene72232:CDS
CAGACTTGAAGCACCAAATG+TGG 0.592614 6.3:-81662864 None:intergenic
CTAGGAACCAACCACCCTAA+GGG 0.605522 6.3:-81665157 None:intergenic
AAGGAAGAATTGTGCGACGA+TGG 0.620883 6.3:-81665251 None:intergenic
AGAAGATTCCGTATTTAAGG+TGG 0.621906 6.3:-81665285 None:intergenic
GCAGGTGGAGCATTTGCAGA+TGG 0.625709 6.3:+81662104 MS.gene72232:CDS
TCTCAGTACCATAATTCACA+AGG 0.628815 6.3:-81663892 None:intergenic
CAGATGGTAGCACCCTCAAG+AGG 0.631499 6.3:+81662120 MS.gene72232:CDS
TACTGAAATGATAATATGCA+TGG 0.645085 6.3:+81664399 MS.gene72232:CDS
AGAGATAACCTCCATCCCCA+AGG 0.646035 6.3:-81663923 None:intergenic
AGATGGTAGCACCCTCAAGA+GGG 0.662568 6.3:+81662121 MS.gene72232:CDS
AGTAGCCAAAACTATAGCTG+TGG 0.663529 6.3:-81665038 None:intergenic
ATTGTCAAGGACGAAAACAA+GGG 0.664475 6.3:+81665430 MS.gene72232:CDS
GCAACATTCATGTTCATCGG+AGG 0.665148 6.3:+81663965 MS.gene72232:CDS
GTCATCTGCACAAAGTGTTG+TGG 0.672138 6.3:+81665204 MS.gene72232:CDS
ACTGAGAAAATTCATCCTTG+GGG 0.680112 6.3:+81663908 MS.gene72232:CDS
TAAGGTGGCAAAGTGACACA+AGG 0.685068 6.3:-81665270 None:intergenic
AGTTAGGGGAAAATGGCAGG+TGG 0.686132 6.3:+81662089 None:intergenic
TTGTCAAGGACGAAAACAAG+GGG 0.689476 6.3:+81665431 MS.gene72232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATCTAAAAAAACAATTAAA+AGG + chr6.3:81664488-81664507 MS.gene72232:intron 15.0%
!!! ACAAAACTTGATTTTAATTA+AGG - chr6.3:81663655-81663674 None:intergenic 15.0%
!!! CATGATTTTTCTAATTATTA+TGG + chr6.3:81663763-81663782 MS.gene72232:intron 15.0%
!!! TAGAAAAAATTATCTAAAGT+AGG - chr6.3:81664644-81664663 None:intergenic 15.0%
!!! TATAACTATGTTAAAGTATT+TGG - chr6.3:81663681-81663700 None:intergenic 15.0%
!! AACGATTAATCATAAACTAA+TGG + chr6.3:81662661-81662680 MS.gene72232:intron 20.0%
!! ATAATAATCTATGACGATAT+CGG + chr6.3:81663482-81663501 MS.gene72232:intron 20.0%
!! ATTAGACATACATGAAAAAT+TGG - chr6.3:81663086-81663105 None:intergenic 20.0%
!! TAAAACCAATTTATAAGGTA+AGG - chr6.3:81663290-81663309 None:intergenic 20.0%
!! TCACATAAATGCTTATTTAT+AGG - chr6.3:81664882-81664901 None:intergenic 20.0%
!! TGATTTCCTATTCTTATAAA+TGG - chr6.3:81662309-81662328 None:intergenic 20.0%
!!! ACTTGATTTTAATTAAGGTA+AGG - chr6.3:81663650-81663669 None:intergenic 20.0%
!!! AGTGATTTTCTTATTTGTTT+TGG + chr6.3:81665114-81665133 MS.gene72232:CDS 20.0%
!!! ATTTTGCCATTTATAAGAAT+AGG + chr6.3:81662300-81662319 MS.gene72232:intron 20.0%
!!! ATTTTTATTTCACATAAGGT+GGG - chr6.3:81663380-81663399 None:intergenic 20.0%
!!! CAAAATTATGTTTCTACATT+AGG + chr6.3:81664570-81664589 MS.gene72232:intron 20.0%
!!! CTAATGTAGAAACATAATTT+TGG - chr6.3:81664572-81664591 None:intergenic 20.0%
!!! GCTAATTTGAGAATTTTTTT+TGG + chr6.3:81664993-81665012 MS.gene72232:intron 20.0%
!!! TGAGATTTTTATTTCACATA+AGG - chr6.3:81663384-81663403 None:intergenic 20.0%
! AAACTCAATTCAAACCTTAT+AGG - chr6.3:81663256-81663275 None:intergenic 25.0%
! AATGACCTTACCTTATAAAT+TGG + chr6.3:81663282-81663301 MS.gene72232:intron 25.0%
! AGAAGATAAATCTCTTCAAT+TGG - chr6.3:81665382-81665401 None:intergenic 25.0%
! CAAATTAGCAACAAAAAAAG+TGG - chr6.3:81664982-81665001 None:intergenic 25.0%
! CGTCATAAAACCAATTTATA+AGG - chr6.3:81663295-81663314 None:intergenic 25.0%
! GGCAAAATCAAAATATGTAT+TGG - chr6.3:81662288-81662307 None:intergenic 25.0%
! TACTGAAATGATAATATGCA+TGG + chr6.3:81664399-81664418 MS.gene72232:CDS 25.0%
! TCATATTGAATAGACCTATA+AGG + chr6.3:81663239-81663258 MS.gene72232:intron 25.0%
! TCTCATATTGAATAGAGATA+AGG + chr6.3:81663399-81663418 MS.gene72232:intron 25.0%
! TTCTAAATAAACTAGTTGCT+TGG + chr6.3:81664659-81664678 MS.gene72232:intron 25.0%
!! AGAATTTGATGATCTTATTG+AGG + chr6.3:81664090-81664109 MS.gene72232:CDS 25.0%
!! ATCTAAAGTAGGTTAAAACA+GGG - chr6.3:81664633-81664652 None:intergenic 25.0%
!! ATTTTCCAAACAATTGGATT+TGG + chr6.3:81664259-81664278 MS.gene72232:CDS 25.0%
!! CTCATATTTTCTTGCATTAT+TGG + chr6.3:81662176-81662195 MS.gene72232:CDS 25.0%
!! TATCTAAAGTAGGTTAAAAC+AGG - chr6.3:81664634-81664653 None:intergenic 25.0%
!! TTGATAATTTAGAGTTTCGT+CGG + chr6.3:81662579-81662598 MS.gene72232:intron 25.0%
!! TTTTCTAATTATTATGGTGC+AGG + chr6.3:81663769-81663788 MS.gene72232:intron 25.0%
!!! GATTTTTATTTCACATAAGG+TGG - chr6.3:81663381-81663400 None:intergenic 25.0%
!!! TGACAAAAGATTGTTTTAGT+CGG + chr6.3:81662616-81662635 MS.gene72232:intron 25.0%
!!! TTCTTATTTGTTTTGGCATA+TGG + chr6.3:81665121-81665140 MS.gene72232:CDS 25.0%
AACTCTTTCCATTAGAGATA+AGG + chr6.3:81665182-81665201 MS.gene72232:CDS 30.0%
AATAGACCTCAATTCATCAT+TGG + chr6.3:81664169-81664188 MS.gene72232:CDS 30.0%
AATATAGCAATGCTGATCAT+TGG + chr6.3:81662971-81662990 MS.gene72232:CDS 30.0%
ATCTTCTGTTTGAGAATCAT+TGG + chr6.3:81665395-81665414 MS.gene72232:CDS 30.0%
ATTACCTAAAATTTCCCCAA+GGG - chr6.3:81662434-81662453 None:intergenic 30.0%
ATTGCTAACCTTGTGAATTA+TGG + chr6.3:81663884-81663903 MS.gene72232:CDS 30.0%
CATTTGGGAAAAATTCTATG+AGG - chr6.3:81662739-81662758 None:intergenic 30.0%
CCAATTGTTTGGAAAATAAC+AGG - chr6.3:81664256-81664275 None:intergenic 30.0%
CTTATTTCCATAAGCTCAAT+AGG + chr6.3:81664780-81664799 MS.gene72232:intron 30.0%
CTTTATGAGCATAAGATAAC+TGG + chr6.3:81662149-81662168 MS.gene72232:CDS 30.0%
GTAGTGTTAGAAAAGATTAG+AGG + chr6.3:81664049-81664068 MS.gene72232:CDS 30.0%
GTGTTCATTTGGAAATTGAA+TGG - chr6.3:81662523-81662542 None:intergenic 30.0%
TACTGAGAAAATTCATCCTT+GGG + chr6.3:81663907-81663926 MS.gene72232:CDS 30.0%
TATTACCTAAAATTTCCCCA+AGG - chr6.3:81662435-81662454 None:intergenic 30.0%
TCAAGTCTGACAAAAAACAA+AGG + chr6.3:81662878-81662897 MS.gene72232:CDS 30.0%
TCCTCTATATCTTTCAGAAA+TGG + chr6.3:81663796-81663815 MS.gene72232:CDS 30.0%
TTCCTAAACAAGTTGTTAAC+TGG - chr6.3:81663859-81663878 None:intergenic 30.0%
! CCAATAGTGTTGAACATAAA+GGG + chr6.3:81663552-81663571 MS.gene72232:intron 30.0%
! GGTCTTACTTGAGTTTTTAA+AGG + chr6.3:81663420-81663439 MS.gene72232:intron 30.0%
! TCCAATAGTGTTGAACATAA+AGG + chr6.3:81663551-81663570 MS.gene72232:intron 30.0%
! TGATAATTTAGAGTTTCGTC+GGG + chr6.3:81662580-81662599 MS.gene72232:intron 30.0%
! TTATCAAGAGTGTGTTCATT+TGG - chr6.3:81662534-81662553 None:intergenic 30.0%
! TTCCAGTTAACAACTTGTTT+AGG + chr6.3:81663854-81663873 MS.gene72232:CDS 30.0%
! TTGAACATAAAGGGTGTATT+AGG + chr6.3:81663561-81663580 MS.gene72232:intron 30.0%
!!! ATAGTTTTGGCTACTTGTTT+TGG + chr6.3:81665046-81665065 MS.gene72232:CDS 30.0%
!!! CCTGTTATTTTCCAAACAAT+TGG + chr6.3:81664253-81664272 MS.gene72232:CDS 30.0%
!!! GTTTTGGAAGAATATTGTCA+AGG + chr6.3:81665417-81665436 MS.gene72232:CDS 30.0%
!!! TGTTTGAGAATCATTGGTTT+TGG + chr6.3:81665401-81665420 MS.gene72232:CDS 30.0%
AAGCTATCCTATTGAGCTTA+TGG - chr6.3:81664790-81664809 None:intergenic 35.0%
AAGTTGTTAACTGGAAGAGT+TGG - chr6.3:81663850-81663869 None:intergenic 35.0%
ACTGAGAAAATTCATCCTTG+GGG + chr6.3:81663908-81663927 MS.gene72232:CDS 35.0%
AGAAGATTCCGTATTTAAGG+TGG - chr6.3:81665288-81665307 None:intergenic 35.0%
AGGAAAGCTAGTATCTTAGT+TGG + chr6.3:81662902-81662921 MS.gene72232:CDS 35.0%
ATAAATAGTGTGTGACGCAA+TGG - chr6.3:81663515-81663534 None:intergenic 35.0%
ATCATTGGACGTATTCTTCT+TGG + chr6.3:81662986-81663005 MS.gene72232:CDS 35.0%
ATTGCACCAATGATGAATTG+AGG - chr6.3:81664178-81664197 None:intergenic 35.0%
ATTGTCAAGGACGAAAACAA+GGG + chr6.3:81665430-81665449 MS.gene72232:CDS 35.0%
CCCTTTATGTTCAACACTAT+TGG - chr6.3:81663555-81663574 None:intergenic 35.0%
GAGGTCTATTCTTTCTCAAA+AGG - chr6.3:81664159-81664178 None:intergenic 35.0%
GATCAGCATTGCTATATTCT+TGG - chr6.3:81662969-81662988 None:intergenic 35.0%
GATGGAAAACAACTGTCATT+TGG + chr6.3:81665070-81665089 MS.gene72232:CDS 35.0%
GCAAGAAGATTCCGTATTTA+AGG - chr6.3:81665291-81665310 None:intergenic 35.0%
GCTCTATTTGGATATGATCT+TGG + chr6.3:81662212-81662231 MS.gene72232:CDS 35.0%
GTACTGAGAAAATTCATCCT+TGG + chr6.3:81663906-81663925 MS.gene72232:CDS 35.0%
GTCCTCGAGATGAAAAAATA+TGG + chr6.3:81663719-81663738 MS.gene72232:intron 35.0%
GTCTGACAAAAAACAAAGGA+AGG + chr6.3:81662882-81662901 MS.gene72232:CDS 35.0%
TATTGTCAAGGACGAAAACA+AGG + chr6.3:81665429-81665448 MS.gene72232:CDS 35.0%
TCACTTTGCCACCTTAAATA+CGG + chr6.3:81665277-81665296 MS.gene72232:CDS 35.0%
TCTAATGGAAAGAGTTCACT+AGG - chr6.3:81665178-81665197 None:intergenic 35.0%
TCTCAGTACCATAATTCACA+AGG - chr6.3:81663895-81663914 None:intergenic 35.0%
TCTTTCTCAAAAGGAGATTC+TGG - chr6.3:81664150-81664169 None:intergenic 35.0%
TTACCTAAAATTTCCCCAAG+GGG - chr6.3:81662433-81662452 None:intergenic 35.0%
TTCTATGAGGAAATCATCCA+TGG - chr6.3:81662726-81662745 None:intergenic 35.0%
TTTATTTCACATAAGGTGGG+TGG - chr6.3:81663377-81663396 None:intergenic 35.0%
TTTGGCATATGGAAGATCTT+GGG + chr6.3:81665132-81665151 MS.gene72232:CDS 35.0%
! AAATGCTAACTTGTGCCTTA+AGG - chr6.3:81664610-81664629 None:intergenic 35.0%
! GAGTATTTCTTGATGATCAC+AGG + chr6.3:81662689-81662708 MS.gene72232:intron 35.0%
! GCCATTTCTGAAAGATATAG+AGG - chr6.3:81663800-81663819 None:intergenic 35.0%
! TATTTCTTGATGATCACAGG+TGG + chr6.3:81662692-81662711 MS.gene72232:intron 35.0%
! TTTTCCCAAATGTGTATGAG+AGG + chr6.3:81662747-81662766 MS.gene72232:CDS 35.0%
! TTTTGGCATATGGAAGATCT+TGG + chr6.3:81665131-81665150 MS.gene72232:CDS 35.0%
!! ATTCTTCTTGGAGTTGGTAT+TGG + chr6.3:81662998-81663017 MS.gene72232:CDS 35.0%
!!! GACCATATTTTTTCATCTCG+AGG - chr6.3:81663724-81663743 None:intergenic 35.0%
AGAAAATTCATCCTTGGGGA+TGG + chr6.3:81663912-81663931 MS.gene72232:CDS 40.0%
AGTAGACAAAGCAGCTCATA+AGG - chr6.3:81665333-81665352 None:intergenic 40.0%
AGTAGCCAAAACTATAGCTG+TGG - chr6.3:81665041-81665060 None:intergenic 40.0%
ATAAAGATGAGCCCTCTTGA+GGG - chr6.3:81662135-81662154 None:intergenic 40.0%
ATGGCACCAGCAAAAATTAG+AGG + chr6.3:81663815-81663834 MS.gene72232:CDS 40.0%
CAGAGCCAAATCCAATTGTT+TGG - chr6.3:81664267-81664286 None:intergenic 40.0%
CCAGCAACATTCATGTTCAT+CGG + chr6.3:81663962-81663981 MS.gene72232:CDS 40.0%
CCAGCATTTCAACAACTAAC+TGG + chr6.3:81664205-81664224 MS.gene72232:CDS 40.0%
CCAGTTAGTTGTTGAAATGC+TGG - chr6.3:81664208-81664227 None:intergenic 40.0%
CTTTGGTTGACAAGTTTGGT+AGG + chr6.3:81664353-81664372 MS.gene72232:CDS 40.0%
GCAGATGACCTTATCTCTAA+TGG - chr6.3:81665193-81665212 None:intergenic 40.0%
GCTTCCTCTCATACACATTT+GGG - chr6.3:81662754-81662773 None:intergenic 40.0%
TACACTCATCTCAATGGCTT+TGG + chr6.3:81664336-81664355 MS.gene72232:CDS 40.0%
TCTTGCTACACTCATCTCAA+TGG + chr6.3:81664330-81664349 MS.gene72232:CDS 40.0%
TGCTTCCTCTCATACACATT+TGG - chr6.3:81662755-81662774 None:intergenic 40.0%
TTGGCATATGGAAGATCTTG+GGG + chr6.3:81665133-81665152 MS.gene72232:CDS 40.0%
TTGTCAAGGACGAAAACAAG+GGG + chr6.3:81665431-81665450 MS.gene72232:CDS 40.0%
! ACTGCTCCTCTAATTTTTGC+TGG - chr6.3:81663824-81663843 None:intergenic 40.0%
! ATTGGAACTTGCTTGGTTTC+TGG - chr6.3:81665364-81665383 None:intergenic 40.0%
! CAAACAATTGGATTTGGCTC+TGG + chr6.3:81664265-81664284 MS.gene72232:CDS 40.0%
! CTACTCTTCCTTCATCGATT+CGG - chr6.3:81664033-81664052 None:intergenic 40.0%
! CTCAAAAGGAGATTCTGGAA+TGG - chr6.3:81664145-81664164 None:intergenic 40.0%
! CTCTTCAATTGGAACTTGCT+TGG - chr6.3:81665371-81665390 None:intergenic 40.0%
! GATTGCCACAGCTATAGTTT+TGG + chr6.3:81665033-81665052 MS.gene72232:intron 40.0%
! GGTTCTGTAAGCTTCTTTTG+TGG + chr6.3:81662923-81662942 MS.gene72232:CDS 40.0%
! TCTTGCATTATTGGAGCACT+TGG + chr6.3:81662185-81662204 MS.gene72232:CDS 40.0%
! TGGTAGGAGAGCTTTCTTTT+TGG + chr6.3:81664369-81664388 MS.gene72232:CDS 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG + chr6.3:81664376-81664395 MS.gene72232:CDS 40.0%
!! ATGGCTTTGGTTGACAAGTT+TGG + chr6.3:81664349-81664368 MS.gene72232:CDS 40.0%
!! CTTGGAGTTGGTATTGGATT+TGG + chr6.3:81663004-81663023 MS.gene72232:CDS 40.0%
!! GCTTCTTAACTTGTGCCTTA+AGG + chr6.3:81664592-81664611 MS.gene72232:intron 40.0%
!! GGATATGATCTTGGTGTTTC+AGG + chr6.3:81662221-81662240 MS.gene72232:CDS 40.0%
!!! TTGGCTACTTGTTTTGGAGA+TGG + chr6.3:81665052-81665071 MS.gene72232:CDS 40.0%
AAATTCATCCTTGGGGATGG+AGG + chr6.3:81663915-81663934 MS.gene72232:CDS 45.0%
AAGGAAGAATTGTGCGACGA+TGG - chr6.3:81665254-81665273 None:intergenic 45.0%
CATAAAGATGAGCCCTCTTG+AGG - chr6.3:81662136-81662155 None:intergenic 45.0%
CCAAACAGTCTCGTTGAACA+AGG + chr6.3:81664007-81664026 MS.gene72232:CDS 45.0%
CCGATGAACATGAATGTTGC+TGG - chr6.3:81663965-81663984 None:intergenic 45.0%
CCTTGTTCAACGAGACTGTT+TGG - chr6.3:81664010-81664029 None:intergenic 45.0%
GCAACATTCATGTTCATCGG+AGG + chr6.3:81663965-81663984 MS.gene72232:CDS 45.0%
GGACGTATTCTTCTTGGAGT+TGG + chr6.3:81662992-81663011 MS.gene72232:CDS 45.0%
TAAGGTGGCAAAGTGACACA+AGG - chr6.3:81665273-81665292 None:intergenic 45.0%
! CAGACTTGAAGCACCAAATG+TGG - chr6.3:81662867-81662886 None:intergenic 45.0%
! CATGCTAACTCGTGTCGTTA+GGG + chr6.3:81664454-81664473 MS.gene72232:intron 45.0%
! GAACCCCTTGGGGAAATTTT+AGG + chr6.3:81662427-81662446 MS.gene72232:intron 45.0%
! TCATGCTAACTCGTGTCGTT+AGG + chr6.3:81664453-81664472 MS.gene72232:intron 45.0%
! TGCATTATTGGAGCACTTGG+CGG + chr6.3:81662188-81662207 MS.gene72232:CDS 45.0%
!! ACGAGACTGTTTGGTGTTTC+TGG - chr6.3:81664001-81664020 None:intergenic 45.0%
!! GTCATCTGCACAAAGTGTTG+TGG + chr6.3:81665204-81665223 MS.gene72232:CDS 45.0%
!! TATAAATTAAAACTTAAATT+TGG + chr6.3:81663330-81663349 MS.gene72232:intron 5.0%
ACATAAGGTGGGTGGTCTGA+TGG - chr6.3:81663369-81663388 None:intergenic 50.0%
ACTAGGAACCAACCACCCTA+AGG - chr6.3:81665161-81665180 None:intergenic 50.0%
AGAGATAACCTCCATCCCCA+AGG - chr6.3:81663926-81663945 None:intergenic 50.0%
AGATGGTAGCACCCTCAAGA+GGG + chr6.3:81662121-81662140 MS.gene72232:CDS 50.0%
CACAGGTGGTGTAACTTCCA+TGG + chr6.3:81662706-81662725 MS.gene72232:intron 50.0%
CCAAGGGGTTCACTTGAAAG+GGG - chr6.3:81662418-81662437 None:intergenic 50.0%
CCCAAGGGGTTCACTTGAAA+GGG - chr6.3:81662419-81662438 None:intergenic 50.0%
CTAGGAACCAACCACCCTAA+GGG - chr6.3:81665160-81665179 None:intergenic 50.0%
GAACAAGGCCGAATCGATGA+AGG + chr6.3:81664022-81664041 MS.gene72232:CDS 50.0%
GAAGATCTTGGGGTCCCTTA+GGG + chr6.3:81665143-81665162 MS.gene72232:CDS 50.0%
TGGGGATGGAGGTTATCTCT+AGG + chr6.3:81663926-81663945 MS.gene72232:CDS 50.0%
! CATTATTGGAGCACTTGGCG+GGG + chr6.3:81662190-81662209 MS.gene72232:CDS 50.0%
! CCCTTTCAAGTGAACCCCTT+GGG + chr6.3:81662416-81662435 MS.gene72232:intron 50.0%
! CCTTTCAAGTGAACCCCTTG+GGG + chr6.3:81662417-81662436 MS.gene72232:intron 50.0%
! GCATTATTGGAGCACTTGGC+GGG + chr6.3:81662189-81662208 MS.gene72232:CDS 50.0%
CAGATGGTAGCACCCTCAAG+AGG + chr6.3:81662120-81662139 MS.gene72232:CDS 55.0%
CCCCAAGGGGTTCACTTGAA+AGG - chr6.3:81662420-81662439 None:intergenic 55.0%
GCTGCTCTCGTGTCCACATT+TGG + chr6.3:81662851-81662870 MS.gene72232:CDS 55.0%
GGAAGATCTTGGGGTCCCTT+AGG + chr6.3:81665142-81665161 MS.gene72232:CDS 55.0%
! CCCCTTTCAAGTGAACCCCT+TGG + chr6.3:81662415-81662434 MS.gene72232:intron 55.0%
! GCAGGTGGAGCATTTGCAGA+TGG + chr6.3:81662104-81662123 MS.gene72232:CDS 55.0%
GATCTTGGGGTCCCTTAGGG+TGG + chr6.3:81665146-81665165 MS.gene72232:CDS 60.0%
GCACTTGGCGGGGCTCTATT+TGG + chr6.3:81662200-81662219 MS.gene72232:CDS 60.0%
TTGGGGTCCCTTAGGGTGGT+TGG + chr6.3:81665150-81665169 MS.gene72232:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 81662101 81665471 81662101 ID=MS.gene72232
chr6.3 mRNA 81662101 81665471 81662101 ID=MS.gene72232.t1;Parent=MS.gene72232
chr6.3 exon 81662101 81662242 81662101 ID=MS.gene72232.t1.exon1;Parent=MS.gene72232.t1
chr6.3 CDS 81662101 81662242 81662101 ID=cds.MS.gene72232.t1;Parent=MS.gene72232.t1
chr6.3 exon 81662711 81663033 81662711 ID=MS.gene72232.t1.exon2;Parent=MS.gene72232.t1
chr6.3 CDS 81662711 81663033 81662711 ID=cds.MS.gene72232.t1;Parent=MS.gene72232.t1
chr6.3 exon 81663791 81664420 81663791 ID=MS.gene72232.t1.exon3;Parent=MS.gene72232.t1
chr6.3 CDS 81663791 81664420 81663791 ID=cds.MS.gene72232.t1;Parent=MS.gene72232.t1
chr6.3 exon 81665034 81665471 81665034 ID=MS.gene72232.t1.exon4;Parent=MS.gene72232.t1
chr6.3 CDS 81665034 81665471 81665034 ID=cds.MS.gene72232.t1;Parent=MS.gene72232.t1
Gene Sequence

>MS.gene72232

ATGGCAGGTGGAGCATTTGCAGATGGTAGCACCCTCAAGAGGGCTCATCTTTATGAGCATAAGATAACTGGATATCTCATATTTTCTTGCATTATTGGAGCACTTGGCGGGGCTCTATTTGGATATGATCTTGGTGTTTCAGGTGAGTTCAACTTAATTTGTAAATTTCATTATAAAAAATAAACCAATACATATTTTGATTTTGCCATTTATAAGAATAGGAAATCATTTTCAAAGAAAAATTGAAAAGTTTATATAAACTTCATTGATGATTGTATTTTATCACAAGTTAAATATAACTCAACTTTTTTTTTCCCCTTTCAAGTGAACCCCTTGGGGAAATTTTAGGTAATAATTTGAAAATCACATATATATATATATATATATATATATATATATATATATATATTTTTTATTAACCATTCAATTTCCAAATGAACACACTCTTGATAATTTAGAGTTCAGTCACAACACACACTTGATAATTTAGAGTTTCGTCGGGAATAAATAAAGTTTGACAAAAGATTGTTTTAGTCGGAATTTAAATTTGAGTACTCTTGAACGATTAATCATAAACTAATGGTATGAGAGTATTTCTTGATGATCACAGGTGGTGTAACTTCCATGGATGATTTCCTCATAGAATTTTTCCCAAATGTGTATGAGAGGAAGCATGCAAAACTTCAAGAAACAGATTATTGTAAATATGATGATCAAATATTGACACTATTTACTTCATCTCTCTACTTTGCTGCTCTCGTGTCCACATTTGGTGCTTCAAGTCTGACAAAAAACAAAGGAAGGAAAGCTAGTATCTTAGTTGGTTCTGTAAGCTTCTTTTGTGGAGCTATTCTCAATGCAGCTGCCAAGAATATAGCAATGCTGATCATTGGACGTATTCTTCTTGGAGTTGGTATTGGATTTGGAAATCAAGTAAGTTTAATTTTAGAGCTTAATAACTATACACTAATAACAATATAAGCCAATTTTTCATGTATGTCTAATCATTTTAATCACGTTGACACAGTATAATCATGTTTTAAGAAGTATTGCTTTATTATGATGTGACAAGATAATGAAATATGATTAAATATTTATATAAAATTTGTCAACACTTTGTATTGAAAAAATTCAAGTCTCATATTGAATAGACCTATAAGGTTTGAATTGAGTTTATAAAGAATGACCTTACCTTATAAATTGGTTTTATGACGATGAGTTAGACTCAATATAAATTAAAACTTAAATTTGGTATCAAATTTTATCCATCAGACCACCCACCTTATGTGAAATAAAAATCTCATATTGAATAGAGATAAGGTCTTACTTGAGTTTTTAAAGGTATATACAAATTCTTTATGTAAACATGAGTTAGCTTAGTATAATAATCTATGACGATATCGGAGTCTATCCATTGCGTCACACACTATTTATATTTACACATCAAATCTCCAATAGTGTTGAACATAAAGGGTGTATTAGGAAAAACTCTAGTCTCACACAAAATAGAGATCAATTCAAAAAATAGTTTATAAAGAGTGACATTCCTTACCTTAATTAAAATCAAGTTTTGTTCACCAAATACTTTAACATAGTTATAAATTTTTTACTTTAACATGTCCTCGAGATGAAAAAATATGGTCACGAATTTTACTTGCACATCATGATTTTTCTAATTATTATGGTGCAGGCTGTTCCTCTATATCTTTCAGAAATGGCACCAGCAAAAATTAGAGGAGCAGTGAACCAACTCTTCCAGTTAACAACTTGTTTAGGAATTTTGATTGCTAACCTTGTGAATTATGGTACTGAGAAAATTCATCCTTGGGGATGGAGGTTATCTCTAGGTTTAGCAACAGTTCCAGCAACATTCATGTTCATCGGAGGCGTTTTTTGTCCAGAAACACCAAACAGTCTCGTTGAACAAGGCCGAATCGATGAAGGAAGAGTAGTGTTAGAAAAGATTAGAGGAACAAGAAATGTTGATGCAGAATTTGATGATCTTATTGAGGCTAGCAGAGAAGCAAAATCTATTAAGAATCCATTCCAGAATCTCCTTTTGAGAAAGAATAGACCTCAATTCATCATTGGTGCAATTTGTATTCCAGCATTTCAACAACTAACTGGAAACAACTCTATTCTATTCTATGCTCCTGTTATTTTCCAAACAATTGGATTTGGCTCTGGTGCATCTCTATATTCATCTGTTATTACAAGTGTTGCTCTTGTTCTTGCTACACTCATCTCAATGGCTTTGGTTGACAAGTTTGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTACTGAAATGATAATATGCATGGTAATTACATCTTTCATATATATTATTAAGTGTCATGCTAACTCGTGTCGTTAGGGCACATATTAATGATCTAAAAAAACAATTAAAAGGTAAATTTTGTATTGAAAAAAAAAGTTTTTAAGCTTTCAAGATATTGAATGTACAATTTCCAAAATTATGTTTCTACATTAGGCTTCTTAACTTGTGCCTTAAGGCACAAGTTAGCATTTCCCTGTTTTAACCTACTTTAGATAATTTTTTCTAAATAAACTAGTTGCTTGGATTGACGTGTTTTAGCTTATCTACTCACATAAACACTTGAAAACTGTCTAAAAGTACTTATAAAAACAACTAATGACACATTCATAAGTTATTTTCAGCTTATTTCCATAAGCTCAATAGGATAGCTTATGAAAACAGCTTATTACTTTTATGAAAACAGTTTGTCTCTATTGTTATCTTTTTTGTTACAGAAATAACCTATAAATAAGCATTTATGTGATAAAAACTTATGCTATACGTGTTTGATGTTTATGCAAAGAGAACGTGAAATGAAAAATAAAACATGACTGATATACACCACTTTTTTTGTTGCTAATTTGAGAATTTTTTTTGGTTGTTTTGAAATTTGCAGATTGCCACAGCTATAGTTTTGGCTACTTGTTTTGGAGATGGAAAACAACTGTCATTTGGAGTTGCTATCTTTCTAGTTTTAGTGATTTTCTTATTTGTTTTGGCATATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCTAGTGAACTCTTTCCATTAGAGATAAGGTCATCTGCACAAAGTGTTGTGGTGTGTGTCAACATGATCTTCACAGCCATCGTCGCACAATTCTTCCTTGTGTCACTTTGCCACCTTAAATACGGAATCTTCTTGCTTTTTGCTGCATTGATTGTCCTTATGAGCTGCTTTGTCTACTTCTTATTGCCAGAAACCAAGCAAGTTCCAATTGAAGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAATATTGTCAAGGACGAAAACAAGGGGTCCGAGACACAAGCATAA
Protein sequence

>MS.gene72232.t1

MAGGAFADGSTLKRAHLYEHKITGYLIFSCIIGALGGALFGYDLGVSGGVTSMDDFLIEFFPNVYERKHAKLQETDYCKYDDQILTLFTSSLYFAALVSTFGASSLTKNKGRKASILVGSVSFFCGAILNAAAKNIAMLIIGRILLGVGIGFGNQAVPLYLSEMAPAKIRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPATFMFIGGVFCPETPNSLVEQGRIDEGRVVLEKIRGTRNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQFIIGAICIPAFQQLTGNNSILFYAPVIFQTIGFGSGASLYSSVITSVALVLATLISMALVDKFGRRAFFLEAGTEMIICMIATAIVLATCFGDGKQLSFGVAIFLVLVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVYFLLPETKQVPIEEIYLLFENHWFWKNIVKDENKGSETQA