Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74969.t1 | XP_013470280.1 | 99.1 | 212 | 2 | 0 | 27 | 238 | 69 | 280 | 6.50E-111 | 410.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74969.t1 | Q9LZ23 | 84.7 | 196 | 30 | 0 | 43 | 238 | 106 | 301 | 2.4e-90 | 333.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74969.t1 | A0A072VSB7 | 99.1 | 212 | 2 | 0 | 27 | 238 | 69 | 280 | 4.7e-111 | 410.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050444 | MS.gene74969 | -0.806467 | 8.11E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene74969 | -0.813884 | 2.04E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene74969 | -0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene051864 | MS.gene74969 | -0.801801 | 7.59E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene74969 | 0.802484 | 5.49E-49 | -1.69E-46 |
| MS.gene059682 | MS.gene74969 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene059699 | MS.gene74969 | 0.812477 | 4.16E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene74969 | 0.806427 | 8.27E-50 | -1.69E-46 |
| MS.gene06074 | MS.gene74969 | 0.803999 | 2.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74969.t1 | MTR_1g112170 | 99.057 | 212 | 2 | 0 | 27 | 238 | 69 | 280 | 1.41e-153 | 428 |
| MS.gene74969.t1 | MTR_1g112170 | 98.817 | 169 | 2 | 0 | 27 | 195 | 69 | 237 | 4.58e-118 | 337 |
| MS.gene74969.t1 | MTR_2g105090 | 61.972 | 213 | 81 | 0 | 26 | 238 | 78 | 290 | 8.98e-97 | 285 |
| MS.gene74969.t1 | MTR_4g007140 | 61.792 | 212 | 81 | 0 | 27 | 238 | 82 | 293 | 2.68e-96 | 283 |
| MS.gene74969.t1 | MTR_2g105090 | 61.972 | 213 | 81 | 0 | 26 | 238 | 102 | 314 | 4.55e-96 | 283 |
| MS.gene74969.t1 | MTR_5g047260 | 26.286 | 175 | 102 | 4 | 32 | 206 | 31 | 178 | 9.62e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74969.t1 | AT5G04740 | 78.761 | 226 | 47 | 1 | 13 | 238 | 77 | 301 | 5.32e-130 | 369 |
| MS.gene74969.t1 | AT1G16880 | 59.624 | 213 | 86 | 0 | 26 | 238 | 78 | 290 | 6.15e-94 | 277 |
| MS.gene74969.t1 | AT5G04740 | 84.034 | 119 | 19 | 0 | 120 | 238 | 82 | 200 | 3.99e-70 | 214 |
| MS.gene74969.t1 | AT1G16880 | 61.062 | 113 | 44 | 0 | 26 | 138 | 78 | 190 | 4.12e-46 | 153 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 16 | 165 | 6.31e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 16 | 165 | 6.52e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 16 | 165 | 7.24e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 30 | 179 | 7.52e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 30 | 179 | 7.63e-11 | 61.2 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 30 | 179 | 7.71e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 16 | 165 | 8.27e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 16 | 165 | 8.27e-11 | 61.6 |
| MS.gene74969.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 32 | 206 | 30 | 179 | 8.64e-11 | 61.6 |
Find 61 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAAGCATTAAAAGATT+TGG | 0.224631 | 1.3:-76037193 | MS.gene74969:CDS |
| TAACTATCAATATCTGTTTC+TGG | 0.249349 | 1.3:+76034055 | None:intergenic |
| ATGAAAGCATTAAAAGATTT+GGG | 0.302504 | 1.3:-76037192 | MS.gene74969:CDS |
| CGAATGCTCTCTAACATATC+AGG | 0.337635 | 1.3:+76036445 | None:intergenic |
| TGCAACTCATATTCAAGTTA+AGG | 0.354573 | 1.3:-76034828 | MS.gene74969:CDS |
| CTGCAATAGATTGTTGATAA+TGG | 0.357828 | 1.3:+76036417 | None:intergenic |
| TTGCCAAGGATGGAGGGAGG+GGG | 0.359117 | 1.3:-76039352 | None:intergenic |
| GGGTGAAGTGTTTGGCATAA+AGG | 0.378690 | 1.3:-76036170 | MS.gene74969:CDS |
| CATATTCAAGTTAAGGAAGA+TGG | 0.394527 | 1.3:-76034821 | MS.gene74969:CDS |
| GATAAATTTCATGTCAGTTA+TGG | 0.404791 | 1.3:-76034392 | MS.gene74969:CDS |
| CTCACTATGGACAGGCTATC+CGG | 0.412544 | 1.3:-76039297 | MS.gene74969:CDS |
| CTAGCCCTGGGTGAAGTGTT+TGG | 0.426026 | 1.3:-76036178 | MS.gene74969:CDS |
| ACAATTGTGCAACTTAGCTT+TGG | 0.428631 | 1.3:-76037919 | MS.gene74969:CDS |
| CATAGATGCAAACCTCCTCT+TGG | 0.437658 | 1.3:+76034796 | None:intergenic |
| CTTAGCTTTGGTGATCGTCT+TGG | 0.437985 | 1.3:-76037907 | MS.gene74969:CDS |
| ACCCAGGGCTAGTTGTTCAC+TGG | 0.444688 | 1.3:+76036189 | None:intergenic |
| TTTAGTAGTCATCCTCACTA+TGG | 0.447203 | 1.3:-76039310 | MS.gene74969:CDS |
| AGCATTAAAAGATTTGGGAT+TGG | 0.447652 | 1.3:-76037187 | MS.gene74969:CDS |
| CTTGCCAAGGATGGAGGGAG+GGG | 0.462184 | 1.3:-76039353 | None:intergenic |
| CAATATCTGTTTCTGGCGTC+CGG | 0.467240 | 1.3:+76034062 | None:intergenic |
| TGATATATTGTCAGAGACAC+TGG | 0.474998 | 1.3:-76036484 | MS.gene74969:intron |
| AAATTTCATGTCAGTTATGG+TGG | 0.491300 | 1.3:-76034389 | MS.gene74969:CDS |
| GTCCAGTGAACAACTAGCCC+TGG | 0.492569 | 1.3:-76036191 | MS.gene74969:CDS |
| TTTGGGATTGGATGTTTCAA+AGG | 0.494758 | 1.3:-76037175 | MS.gene74969:CDS |
| ATGAATAACCAGCTGAATGC+CGG | 0.501584 | 1.3:+76039278 | None:intergenic |
| TCTTGATCTATCAGTAGTAT+TGG | 0.502060 | 1.3:+76037958 | None:intergenic |
| CAGGCTATCCGGCATTCAGC+TGG | 0.504402 | 1.3:-76039286 | MS.gene74969:intron |
| ATAGATGCAAACCTCCTCTT+GGG | 0.508203 | 1.3:+76034797 | None:intergenic |
| TTGGGATTGGATGTTTCAAA+GGG | 0.510420 | 1.3:-76037174 | MS.gene74969:CDS |
| ATTAAACAGATCAATGTCTC+AGG | 0.515343 | 1.3:-76034360 | MS.gene74969:intron |
| TCTATCAGTAGTATTGGCAT+TGG | 0.516810 | 1.3:+76037964 | None:intergenic |
| ATCGAGACAGCAGATAGGCC+AGG | 0.530479 | 1.3:-76034593 | MS.gene74969:CDS |
| CATAAAGGCTCCAGAAAAGA+AGG | 0.531380 | 1.3:-76036155 | MS.gene74969:intron |
| AATTTCATGTCAGTTATGGT+GGG | 0.532815 | 1.3:-76034388 | MS.gene74969:CDS |
| TAGTCATCCTCACTATGGAC+AGG | 0.546862 | 1.3:-76039305 | MS.gene74969:CDS |
| CCTTGCCAAGGATGGAGGGA+GGG | 0.548489 | 1.3:-76039354 | None:intergenic |
| ATATTCAAGTTAAGGAAGAT+GGG | 0.558978 | 1.3:-76034820 | MS.gene74969:CDS |
| ATTATTTCAACTAGCAACCC+TGG | 0.562653 | 1.3:+76034575 | None:intergenic |
| AAGGGAACTGTCTCCACTGA+GGG | 0.564408 | 1.3:-76037156 | MS.gene74969:CDS |
| TCTGCAGGGTTTGATTGCTA+AGG | 0.568190 | 1.3:-76034414 | MS.gene74969:intron |
| TGTACATCGAGACAGCAGAT+AGG | 0.569651 | 1.3:-76034598 | MS.gene74969:CDS |
| TTGCTTCACTGGTCCCTCAG+TGG | 0.572490 | 1.3:+76037143 | None:intergenic |
| ACTGTCTGCGTTACTACCTC+CGG | 0.580821 | 1.3:-76034081 | MS.gene74969:CDS |
| TCCAGTGAACAACTAGCCCT+GGG | 0.584632 | 1.3:-76036190 | MS.gene74969:CDS |
| ATTTCATGTCAGTTATGGTG+GGG | 0.585354 | 1.3:-76034387 | MS.gene74969:CDS |
| TCGAGACAGCAGATAGGCCA+GGG | 0.587797 | 1.3:-76034592 | MS.gene74969:CDS |
| TATTCCTTGCCAAGGATGGA+GGG | 0.594415 | 1.3:-76039358 | None:intergenic |
| AGGAAGATGGGCCCAAGAGG+AGG | 0.600783 | 1.3:-76034808 | MS.gene74969:intron |
| TCCTTGCCAAGGATGGAGGG+AGG | 0.607495 | 1.3:-76039355 | None:intergenic |
| TCTTGGAGCTCTTCTTGACA+CGG | 0.610014 | 1.3:-76037890 | MS.gene74969:intron |
| TTAAGGAAGATGGGCCCAAG+AGG | 0.615605 | 1.3:-76034811 | MS.gene74969:CDS |
| ACAGATATTGATAGTTACTG+AGG | 0.615661 | 1.3:-76034049 | None:intergenic |
| TATGCCAAACACTTCACCCA+GGG | 0.626733 | 1.3:+76036174 | None:intergenic |
| TATCTGTTTCTGGCGTCCGG+AGG | 0.629851 | 1.3:+76034065 | None:intergenic |
| TTATGCCAAACACTTCACCC+AGG | 0.646264 | 1.3:+76036173 | None:intergenic |
| GATATATTGTCAGAGACACT+GGG | 0.648692 | 1.3:-76036483 | MS.gene74969:intron |
| CGGATAGCCTGTCCATAGTG+AGG | 0.649323 | 1.3:+76039298 | None:intergenic |
| TGTGAACATTGATGTTGAGT+CGG | 0.660513 | 1.3:-76034537 | MS.gene74969:CDS |
| CAGATATTGATAGTTACTGA+GGG | 0.663496 | 1.3:-76034048 | None:intergenic |
| GTCGGCTGAGATCGATACAG+AGG | 0.702999 | 1.3:-76034519 | MS.gene74969:intron |
| AAAGGGAACTGTCTCCACTG+AGG | 0.707401 | 1.3:-76037157 | MS.gene74969:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATAAAAAATAAAA+CGG | + | chr1.3:76038106-76038125 | None:intergenic | 0.0% |
| !! | ATTTATGTTAATTATTACAA+AGG | - | chr1.3:76036530-76036549 | MS.gene74969:intron | 10.0% |
| !!! | AATAAATAAAGGTATAATAA+TGG | - | chr1.3:76034424-76034443 | MS.gene74969:intron | 10.0% |
| !!! | TTAATTATTTGATATTTTTG+TGG | - | chr1.3:76037719-76037738 | MS.gene74969:intron | 10.0% |
| !!! | TTTTTTTTTATGTTAATTGA+CGG | - | chr1.3:76035666-76035685 | MS.gene74969:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr1.3:76034618-76034637 | None:intergenic | 15.0% |
| !! | AATACACTTAGTAATAATAT+AGG | + | chr1.3:76035871-76035890 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr1.3:76034617-76034636 | MS.gene74969:intron | 15.0% |
| !! | AATTTAATAATAATTGCAAC+TGG | + | chr1.3:76036728-76036747 | None:intergenic | 15.0% |
| !! | ATACACTTAGTAATAATATA+GGG | + | chr1.3:76035870-76035889 | None:intergenic | 15.0% |
| !! | ATTATTATTGAAAGAACTAA+AGG | - | chr1.3:76038212-76038231 | MS.gene74969:intron | 15.0% |
| !! | TAGGAAAAATTGAAAATTAA+GGG | + | chr1.3:76037146-76037165 | None:intergenic | 15.0% |
| !!! | ATCAATATCATTACTATTTT+CGG | - | chr1.3:76035099-76035118 | MS.gene74969:intron | 15.0% |
| !!! | ATTAATTGTGTTAATTTTGA+TGG | - | chr1.3:76034329-76034348 | MS.gene74969:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr1.3:76034765-76034784 | MS.gene74969:intron | 15.0% |
| !!! | CAAGTTAATGATTTTTTTAT+CGG | - | chr1.3:76039237-76039256 | MS.gene74969:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr1.3:76034491-76034510 | None:intergenic | 15.0% |
| !!! | GAATATACGTTATTTATTTT+AGG | - | chr1.3:76037310-76037329 | MS.gene74969:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr1.3:76034594-76034613 | None:intergenic | 15.0% |
| !!! | TATATTTATATATTTTGTCC+AGG | - | chr1.3:76037179-76037198 | MS.gene74969:CDS | 15.0% |
| !!! | TGCTTTTTATATTTTACTTT+GGG | - | chr1.3:76038637-76038656 | MS.gene74969:intron | 15.0% |
| !!! | TTGCTTTTTATATTTTACTT+TGG | - | chr1.3:76038636-76038655 | MS.gene74969:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr1.3:76034608-76034627 | MS.gene74969:intron | 20.0% |
| !! | AAATAACGTATATTCTGTTT+AGG | + | chr1.3:76037305-76037324 | None:intergenic | 20.0% |
| !! | AAATATTGTACATAAAAGCA+AGG | + | chr1.3:76035350-76035369 | None:intergenic | 20.0% |
| !! | AACATAATAAAACAAACCTT+CGG | + | chr1.3:76035958-76035977 | None:intergenic | 20.0% |
| !! | AATGATTAAGAGAAAGATAA+TGG | + | chr1.3:76034651-76034670 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr1.3:76034531-76034550 | None:intergenic | 20.0% |
| !! | ATATTTATAAAGAAAACTCG+TGG | + | chr1.3:76037100-76037119 | None:intergenic | 20.0% |
| !! | ATGATATTATCTCTTTATGA+AGG | - | chr1.3:76035931-76035950 | MS.gene74969:intron | 20.0% |
| !! | ATTTATGAACTCTTTGAATT+TGG | + | chr1.3:76037462-76037481 | None:intergenic | 20.0% |
| !! | CAAATTATAAAAATCAGTTG+GGG | + | chr1.3:76038701-76038720 | None:intergenic | 20.0% |
| !! | GCAAATTATAAAAATCAGTT+GGG | + | chr1.3:76038702-76038721 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+AGG | - | chr1.3:76034413-76034432 | MS.gene74969:intron | 20.0% |
| !! | GTAGGAAAAATTGAAAATTA+AGG | + | chr1.3:76037147-76037166 | None:intergenic | 20.0% |
| !! | TAAGAAATACAGTTACTTAT+TGG | - | chr1.3:76036749-76036768 | MS.gene74969:intron | 20.0% |
| !! | TACACTTAGTAATAATATAG+GGG | + | chr1.3:76035869-76035888 | None:intergenic | 20.0% |
| !! | TATAAAAGTTGCTAATTACA+AGG | + | chr1.3:76037076-76037095 | None:intergenic | 20.0% |
| !! | TGCAAATTATAAAAATCAGT+TGG | + | chr1.3:76038703-76038722 | None:intergenic | 20.0% |
| !! | TGCAATAAAGTGATAATAAT+GGG | + | chr1.3:76035038-76035057 | None:intergenic | 20.0% |
| !! | TTTAGGAAATAAAAAATGCA+AGG | + | chr1.3:76037288-76037307 | None:intergenic | 20.0% |
| !! | TTTATGAACTCTTTGAATTT+GGG | + | chr1.3:76037461-76037480 | None:intergenic | 20.0% |
| !!! | AATGATACTATTCTCATTTT+GGG | - | chr1.3:76035779-76035798 | MS.gene74969:intron | 20.0% |
| !!! | ATAGTGTTGTTTGTTTATTT+TGG | - | chr1.3:76037669-76037688 | MS.gene74969:intron | 20.0% |
| !!! | ATGAAAGCATTAAAAGATTT+GGG | - | chr1.3:76036202-76036221 | MS.gene74969:intron | 20.0% |
| !!! | ATTTCACTTCTTTTCATTTT+GGG | - | chr1.3:76035060-76035079 | MS.gene74969:intron | 20.0% |
| !!! | CTCAAAATAATTGTTACTTT+AGG | + | chr1.3:76034753-76034772 | None:intergenic | 20.0% |
| !!! | TAGATGATGGAATAAAAATT+AGG | - | chr1.3:76039139-76039158 | MS.gene74969:intron | 20.0% |
| !!! | TAGTGTTGTTTGTTTATTTT+GGG | - | chr1.3:76037670-76037689 | MS.gene74969:intron | 20.0% |
| !!! | TCAATATCATTACTATTTTC+GGG | - | chr1.3:76035100-76035119 | MS.gene74969:intron | 20.0% |
| !!! | TTCAATTTTTAAGTGGAATA+TGG | + | chr1.3:76037772-76037791 | None:intergenic | 20.0% |
| ! | AAACAGATATAGATACCTTA+TGG | + | chr1.3:76034912-76034931 | None:intergenic | 25.0% |
| ! | AAAGAAGATTAAAGTTCCAA+TGG | + | chr1.3:76034879-76034898 | None:intergenic | 25.0% |
| ! | AACAATGCTAACAAAAATGA+AGG | + | chr1.3:76036320-76036339 | None:intergenic | 25.0% |
| ! | AACTTATACTAAAAGATGCT+TGG | - | chr1.3:76038327-76038346 | MS.gene74969:intron | 25.0% |
| ! | AATAACAAAATCACACTTCA+AGG | + | chr1.3:76035612-76035631 | None:intergenic | 25.0% |
| ! | AATATATAATACTCGTGAGT+AGG | + | chr1.3:76037165-76037184 | None:intergenic | 25.0% |
| ! | ACACTTAGTAATAATATAGG+GGG | + | chr1.3:76035868-76035887 | None:intergenic | 25.0% |
| ! | AGATTATTAAGCTAATCTTG+CGG | - | chr1.3:76037621-76037640 | MS.gene74969:intron | 25.0% |
| ! | AGATTGCAAATATTTGTAAC+TGG | - | chr1.3:76037374-76037393 | MS.gene74969:intron | 25.0% |
| ! | ATACACTAAAGAGATTCAAT+TGG | + | chr1.3:76035583-76035602 | None:intergenic | 25.0% |
| ! | ATAGTTTCATAGATAGATGA+TGG | - | chr1.3:76039126-76039145 | MS.gene74969:intron | 25.0% |
| ! | ATCAACAAAATTCGATATGT+CGG | + | chr1.3:76036447-76036466 | None:intergenic | 25.0% |
| ! | ATGCTAGAATTTAAGTAGTT+TGG | + | chr1.3:76037862-76037881 | None:intergenic | 25.0% |
| ! | CACATGAAATTAACAAAATG+AGG | + | chr1.3:76036074-76036093 | None:intergenic | 25.0% |
| ! | CACTAATTGTTAGTAACTAA+AGG | + | chr1.3:76037524-76037543 | None:intergenic | 25.0% |
| ! | CATTATTATCACTTTATTGC+AGG | - | chr1.3:76035037-76035056 | MS.gene74969:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr1.3:76034381-76034400 | None:intergenic | 25.0% |
| ! | CTGCAATAAAGTGATAATAA+TGG | + | chr1.3:76035039-76035058 | None:intergenic | 25.0% |
| ! | CTTTAGTTACTAACAATTAG+TGG | - | chr1.3:76037522-76037541 | MS.gene74969:intron | 25.0% |
| ! | GATAAATTTCATGTCAGTTA+TGG | - | chr1.3:76039002-76039021 | MS.gene74969:intron | 25.0% |
| ! | GTTATGCAACTAAAATAAAG+TGG | + | chr1.3:76037500-76037519 | None:intergenic | 25.0% |
| ! | GTTCTTTCAATAATAATGTC+CGG | + | chr1.3:76038209-76038228 | None:intergenic | 25.0% |
| ! | TAAATAGTATTCAAGCACTT+GGG | - | chr1.3:76037799-76037818 | MS.gene74969:intron | 25.0% |
| ! | TAACTATCAATATCTGTTTC+TGG | + | chr1.3:76039342-76039361 | None:intergenic | 25.0% |
| ! | TACTATTGAAGATTAACTGA+TGG | - | chr1.3:76038043-76038062 | MS.gene74969:intron | 25.0% |
| ! | TATTGAAAGAACTAAAGGTT+GGG | - | chr1.3:76038217-76038236 | MS.gene74969:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr1.3:76034382-76034401 | None:intergenic | 25.0% |
| ! | TGAAAATTACGAGTCTTTAT+GGG | - | chr1.3:76036092-76036111 | MS.gene74969:intron | 25.0% |
| ! | TTATTGAAAGAACTAAAGGT+TGG | - | chr1.3:76038216-76038235 | MS.gene74969:intron | 25.0% |
| ! | TTGAAAAGCAATTTAGATGT+TGG | - | chr1.3:76039068-76039087 | MS.gene74969:intron | 25.0% |
| ! | TTTGTTCTTGTATTTCTTGT+TGG | - | chr1.3:76036686-76036705 | MS.gene74969:intron | 25.0% |
| !! | ATATTCAAGTTAAGGAAGAT+GGG | - | chr1.3:76038574-76038593 | MS.gene74969:intron | 25.0% |
| !! | CAATGATACTATTCTCATTT+TGG | - | chr1.3:76035778-76035797 | MS.gene74969:intron | 25.0% |
| !! | GATTTCACTTCTTTTCATTT+TGG | - | chr1.3:76035059-76035078 | MS.gene74969:intron | 25.0% |
| !!! | AAAAATTTTGTTTGCTTCAC+TGG | + | chr1.3:76036265-76036284 | None:intergenic | 25.0% |
| !!! | AATTTTTAAGTGGAATATGG+CGG | + | chr1.3:76037769-76037788 | None:intergenic | 25.0% |
| !!! | GAAGTTCAATTGTTGTTTAT+TGG | - | chr1.3:76039200-76039219 | MS.gene74969:intron | 25.0% |
| !!! | GATGAAAGCATTAAAAGATT+TGG | - | chr1.3:76036201-76036220 | MS.gene74969:intron | 25.0% |
| !!! | TAAATTGCTTTTCAACACAA+TGG | + | chr1.3:76039063-76039082 | None:intergenic | 25.0% |
| !!! | TCATTGTCTACTATTTTTCA+TGG | - | chr1.3:76036846-76036865 | MS.gene74969:intron | 25.0% |
| AAATAGTATTCAAGCACTTG+GGG | - | chr1.3:76037800-76037819 | MS.gene74969:intron | 30.0% | |
| AAATTTCATGTCAGTTATGG+TGG | - | chr1.3:76039005-76039024 | MS.gene74969:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr1.3:76034790-76034809 | MS.gene74969:intron | 30.0% | |
| AAGTTAGCAAGAATGAGTAA+CGG | + | chr1.3:76034162-76034181 | None:intergenic | 30.0% | |
| AATCAATCATAAGTGGGAAA+AGG | + | chr1.3:76036478-76036497 | None:intergenic | 30.0% | |
| AATTCCCACAACAAGTTATA+TGG | + | chr1.3:76037886-76037905 | None:intergenic | 30.0% | |
| AATTTCATGTCAGTTATGGT+GGG | - | chr1.3:76039006-76039025 | MS.gene74969:intron | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | - | chr1.3:76034301-76034320 | MS.gene74969:intron | 30.0% | |
| ATAACAAAGAGCTTAACCTT+AGG | + | chr1.3:76035913-76035932 | None:intergenic | 30.0% | |
| ATAGACGTTGTTGCAAAATT+TGG | - | chr1.3:76036590-76036609 | MS.gene74969:intron | 30.0% | |
| ATTAAACAGATCAATGTCTC+AGG | - | chr1.3:76039034-76039053 | MS.gene74969:intron | 30.0% | |
| ATTCCCACAACAAGTTATAT+GGG | + | chr1.3:76037885-76037904 | None:intergenic | 30.0% | |
| CACTTAGTAATAATATAGGG+GGG | + | chr1.3:76035867-76035886 | None:intergenic | 30.0% | |
| CCACTTAAAAATTGAACATC+TGG | - | chr1.3:76037776-76037795 | MS.gene74969:intron | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr1.3:76034378-76034397 | MS.gene74969:CDS | 30.0% | |
| CCTTAAAAGAAAGCTATCAA+GGG | - | chr1.3:76037830-76037849 | MS.gene74969:intron | 30.0% | |
| CTTAAAAGAAAGCTATCAAG+GGG | - | chr1.3:76037831-76037850 | MS.gene74969:intron | 30.0% | |
| GTAAATAGTATTCAAGCACT+TGG | - | chr1.3:76037798-76037817 | MS.gene74969:intron | 30.0% | |
| GTAAATCTTATCAGTAACAG+TGG | + | chr1.3:76034221-76034240 | None:intergenic | 30.0% | |
| GTGAAAATTACGAGTCTTTA+TGG | - | chr1.3:76036091-76036110 | MS.gene74969:intron | 30.0% | |
| TAAATAGTAGCCGTTGTTTA+AGG | - | chr1.3:76034253-76034272 | MS.gene74969:intron | 30.0% | |
| TAACAAAATGAGGAGAAATG+AGG | + | chr1.3:76036064-76036083 | None:intergenic | 30.0% | |
| TAATTCTTACTGCAGATATC+TGG | - | chr1.3:76035388-76035407 | MS.gene74969:intron | 30.0% | |
| TATGTTAATTGACGGTACAT+AGG | - | chr1.3:76035674-76035693 | MS.gene74969:intron | 30.0% | |
| TCCTGCACAAAATTTCAATT+AGG | + | chr1.3:76034943-76034962 | None:intergenic | 30.0% | |
| TCTTGATCTATCAGTAGTAT+TGG | + | chr1.3:76035439-76035458 | None:intergenic | 30.0% | |
| TGTTCCAAGTCGTTATAAAA+GGG | - | chr1.3:76035698-76035717 | MS.gene74969:intron | 30.0% | |
| TTAACAAAAGCTCAGATTCT+TGG | + | chr1.3:76035285-76035304 | None:intergenic | 30.0% | |
| TTACTAAGTGTATTATCCCA+AGG | - | chr1.3:76035877-76035896 | MS.gene74969:intron | 30.0% | |
| TTAGCATTGTTTACTCTTGA+TGG | - | chr1.3:76036329-76036348 | MS.gene74969:intron | 30.0% | |
| ! | ACAAAGGTATATGTGTCAAT+TGG | - | chr1.3:76036546-76036565 | MS.gene74969:intron | 30.0% |
| ! | AGAAAACTTTTCCTGTTTTG+TGG | - | chr1.3:76036370-76036389 | MS.gene74969:intron | 30.0% |
| ! | AGCATTAAAAGATTTGGGAT+TGG | - | chr1.3:76036207-76036226 | MS.gene74969:intron | 30.0% |
| ! | CATATTCAAGTTAAGGAAGA+TGG | - | chr1.3:76038573-76038592 | MS.gene74969:intron | 30.0% |
| ! | CTGCAATAGATTGTTGATAA+TGG | + | chr1.3:76036980-76036999 | None:intergenic | 30.0% |
| ! | GGTAAAGTTACTTTGAGTAA+TGG | + | chr1.3:76038947-76038966 | None:intergenic | 30.0% |
| ! | GTAATGTGCAGAGTATTAAT+TGG | + | chr1.3:76034569-76034588 | None:intergenic | 30.0% |
| ! | GTATATATGATGGAAGTATG+AGG | - | chr1.3:76038068-76038087 | MS.gene74969:intron | 30.0% |
| ! | TCCTAATTGAAATTTTGTGC+AGG | - | chr1.3:76034939-76034958 | MS.gene74969:intron | 30.0% |
| ! | TGCAACTCATATTCAAGTTA+AGG | - | chr1.3:76038566-76038585 | MS.gene74969:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1.3:76034700-76034719 | MS.gene74969:intron | 30.0% |
| !! | ATATAACTTGTTGTGGGAAT+TGG | - | chr1.3:76037885-76037904 | MS.gene74969:intron | 30.0% |
| !! | CCAGATGTTCAATTTTTAAG+TGG | + | chr1.3:76037779-76037798 | None:intergenic | 30.0% |
| !! | CCTTGATAGCTTTCTTTTAA+GGG | + | chr1.3:76037832-76037851 | None:intergenic | 30.0% |
| !! | TACTAACAATTAGTGGACTT+AGG | - | chr1.3:76037529-76037548 | MS.gene74969:intron | 30.0% |
| !! | TTTCTGTGTTTTATTATCGC+CGG | - | chr1.3:76038187-76038206 | MS.gene74969:intron | 30.0% |
| AAATTGCAGCATGCAATATC+TGG | + | chr1.3:76038483-76038502 | None:intergenic | 35.0% | |
| AACTGTGGTGTAAAGCAATA+TGG | + | chr1.3:76035134-76035153 | None:intergenic | 35.0% | |
| AAGCATAAAGAATGCTAGAG+TGG | + | chr1.3:76038168-76038187 | None:intergenic | 35.0% | |
| AAGTCGCAATCAATCATAAG+TGG | + | chr1.3:76036485-76036504 | None:intergenic | 35.0% | |
| AATTACAAGGAAGCTTCTCA+TGG | + | chr1.3:76037063-76037082 | None:intergenic | 35.0% | |
| ACAATTGTGCAACTTAGCTT+TGG | - | chr1.3:76035475-76035494 | MS.gene74969:intron | 35.0% | |
| ACCAATTAATTCGTGTGAGA+CGG | - | chr1.3:76034820-76034839 | MS.gene74969:CDS | 35.0% | |
| ACTGATGGCTGTATATATGA+TGG | - | chr1.3:76038058-76038077 | MS.gene74969:intron | 35.0% | |
| AGTCGCAATCAATCATAAGT+GGG | + | chr1.3:76036484-76036503 | None:intergenic | 35.0% | |
| AGTTAGCAAGAATGAGTAAC+GGG | + | chr1.3:76034161-76034180 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr1.3:76034392-76034411 | MS.gene74969:CDS | 35.0% | |
| ATAAAAATGCTAGCGATGCT+GGG | - | chr1.3:76037590-76037609 | MS.gene74969:intron | 35.0% | |
| ATAGCATGTCGAACATATGA+AGG | - | chr1.3:76036802-76036821 | MS.gene74969:intron | 35.0% | |
| ATCAAACACCTATCGCATAT+TGG | + | chr1.3:76038734-76038753 | None:intergenic | 35.0% | |
| ATGCAAGGAAATACTAGAAG+AGG | + | chr1.3:76037273-76037292 | None:intergenic | 35.0% | |
| ATGCCTCTTTCTATTTGAAG+AGG | - | chr1.3:76037981-76038000 | MS.gene74969:intron | 35.0% | |
| ATTACTTGCACAACAATCTC+AGG | - | chr1.3:76039281-76039300 | MS.gene74969:intron | 35.0% | |
| ATTATTTCAACTAGCAACCC+TGG | + | chr1.3:76038822-76038841 | None:intergenic | 35.0% | |
| ATTTCATGTCAGTTATGGTG+GGG | - | chr1.3:76039007-76039026 | MS.gene74969:intron | 35.0% | |
| CCCTTAAAAGAAAGCTATCA+AGG | - | chr1.3:76037829-76037848 | MS.gene74969:intron | 35.0% | |
| CCTTACAAATCAGTTTCATG+AGG | - | chr1.3:76037420-76037439 | MS.gene74969:intron | 35.0% | |
| CGTGCATAAACCTTAAACAA+CGG | + | chr1.3:76034266-76034285 | None:intergenic | 35.0% | |
| CTGTTCCAAGTCGTTATAAA+AGG | - | chr1.3:76035697-76035716 | MS.gene74969:intron | 35.0% | |
| GATATATTGTCAGAGACACT+GGG | - | chr1.3:76036911-76036930 | MS.gene74969:intron | 35.0% | |
| GGGAGTAATAAATACTGCAT+TGG | - | chr1.3:76034724-76034743 | MS.gene74969:intron | 35.0% | |
| GTGCTCTTCAAAAAGAGTTA+AGG | + | chr1.3:76038427-76038446 | None:intergenic | 35.0% | |
| GTTACTCATTCTTGCTAACT+TGG | - | chr1.3:76034161-76034180 | MS.gene74969:intron | 35.0% | |
| GTTCCAAGTCGTTATAAAAG+GGG | - | chr1.3:76035699-76035718 | MS.gene74969:intron | 35.0% | |
| GTTTGATCATCCTTTATCAG+AGG | - | chr1.3:76039090-76039109 | MS.gene74969:intron | 35.0% | |
| TATTCCTTATATTCACCCTC+TGG | - | chr1.3:76035306-76035325 | MS.gene74969:intron | 35.0% | |
| TATTTACACAGCACACATAC+AGG | + | chr1.3:76037009-76037028 | None:intergenic | 35.0% | |
| TCAAACACCTATCGCATATT+GGG | + | chr1.3:76038733-76038752 | None:intergenic | 35.0% | |
| TCTTTAGTAGAGTCACCATA+AGG | - | chr1.3:76034894-76034913 | MS.gene74969:intron | 35.0% | |
| TGAACTCTTTGAATTTGGGT+TGG | + | chr1.3:76037457-76037476 | None:intergenic | 35.0% | |
| TGATATATTGTCAGAGACAC+TGG | - | chr1.3:76036910-76036929 | MS.gene74969:intron | 35.0% | |
| TGTGAACATTGATGTTGAGT+CGG | - | chr1.3:76038857-76038876 | MS.gene74969:intron | 35.0% | |
| TTGGGATTGGATGTTTCAAA+GGG | - | chr1.3:76036220-76036239 | MS.gene74969:intron | 35.0% | |
| TTTAGTAGTCATCCTCACTA+TGG | - | chr1.3:76034084-76034103 | MS.gene74969:CDS | 35.0% | |
| ! | ATGTGCAGAGTATTAATTGG+AGG | + | chr1.3:76034566-76034585 | None:intergenic | 35.0% |
| ! | CAACGTCTATGATTTGTAAG+TGG | + | chr1.3:76036580-76036599 | None:intergenic | 35.0% |
| ! | CATTGTTTACTCTTGATGGT+TGG | - | chr1.3:76036333-76036352 | MS.gene74969:intron | 35.0% |
| ! | GGACTATTTACCTTCTTTTC+TGG | + | chr1.3:76037252-76037271 | None:intergenic | 35.0% |
| ! | GTGGCCAATTTAGTACTTTT+GGG | - | chr1.3:76037738-76037757 | MS.gene74969:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr1.3:76034565-76034584 | None:intergenic | 35.0% |
| ! | TGTGGCCAATTTAGTACTTT+TGG | - | chr1.3:76037737-76037756 | MS.gene74969:intron | 35.0% |
| ! | TTTGGGATTGGATGTTTCAA+AGG | - | chr1.3:76036219-76036238 | MS.gene74969:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.3:76034465-76034484 | None:intergenic | 35.0% |
| !! | AGGTCCCAAAAGTACTAAAT+TGG | + | chr1.3:76037745-76037764 | None:intergenic | 35.0% |
| !! | CATCCCATATAACTTGTTGT+GGG | - | chr1.3:76037879-76037898 | MS.gene74969:intron | 35.0% |
| !! | CCCTTGATAGCTTTCTTTTA+AGG | + | chr1.3:76037833-76037852 | None:intergenic | 35.0% |
| !! | CCTCATGAAACTGATTTGTA+AGG | + | chr1.3:76037423-76037442 | None:intergenic | 35.0% |
| !! | GATAGCTTTCTTTTAAGGGA+GGG | + | chr1.3:76037828-76037847 | None:intergenic | 35.0% |
| !! | TCTATCAGTAGTATTGGCAT+TGG | + | chr1.3:76035433-76035452 | None:intergenic | 35.0% |
| !! | TGATAGCTTTCTTTTAAGGG+AGG | + | chr1.3:76037829-76037848 | None:intergenic | 35.0% |
| AACTGAAAGTCAGAGACAGA+CGG | + | chr1.3:76038923-76038942 | None:intergenic | 40.0% | |
| AAGACCAGAGGGTGAATATA+AGG | + | chr1.3:76035313-76035332 | None:intergenic | 40.0% | |
| AATTAATTCGTGTGAGACGG+AGG | - | chr1.3:76034823-76034842 | MS.gene74969:CDS | 40.0% | |
| ACCAGTCTAAAAAGACCAGA+GGG | + | chr1.3:76035324-76035343 | None:intergenic | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | - | chr1.3:76034793-76034812 | MS.gene74969:intron | 40.0% | |
| ATAGATGCAAACCTCCTCTT+GGG | + | chr1.3:76038600-76038619 | None:intergenic | 40.0% | |
| ATCTCTTTATGAAGGTCCGA+AGG | - | chr1.3:76035939-76035958 | MS.gene74969:intron | 40.0% | |
| ATGAATAACCAGCTGAATGC+CGG | + | chr1.3:76034119-76034138 | None:intergenic | 40.0% | |
| ATTAATTCGTGTGAGACGGA+GGG | - | chr1.3:76034824-76034843 | MS.gene74969:CDS | 40.0% | |
| ATTGCAACCCAATATGCGAT+AGG | - | chr1.3:76038723-76038742 | MS.gene74969:intron | 40.0% | |
| CAACGGCTACTATTTAGAGA+TGG | + | chr1.3:76034249-76034268 | None:intergenic | 40.0% | |
| CAATGGTGTTCACAAACAAC+TGG | + | chr1.3:76034862-76034881 | None:intergenic | 40.0% | |
| CAGTTGTTTGTGAACACCAT+TGG | - | chr1.3:76034860-76034879 | MS.gene74969:intron | 40.0% | |
| CATAAAAATGCTAGCGATGC+TGG | - | chr1.3:76037589-76037608 | MS.gene74969:intron | 40.0% | |
| CATAAAGGCTCCAGAAAAGA+AGG | - | chr1.3:76037239-76037258 | MS.gene74969:intron | 40.0% | |
| CCACCTCTTCAAATAGAAAG+AGG | + | chr1.3:76037987-76038006 | None:intergenic | 40.0% | |
| CCTCTTTCTATTTGAAGAGG+TGG | - | chr1.3:76037984-76038003 | MS.gene74969:intron | 40.0% | |
| CCTGTAAAGTATGAGGTTGA+CGG | + | chr1.3:76037933-76037952 | None:intergenic | 40.0% | |
| CGAATGCTCTCTAACATATC+AGG | + | chr1.3:76036952-76036971 | None:intergenic | 40.0% | |
| CTGTAAAGTATGAGGTTGAC+GGG | + | chr1.3:76037932-76037951 | None:intergenic | 40.0% | |
| CTTAGGACAAGATCATCCTT+GGG | + | chr1.3:76035896-76035915 | None:intergenic | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr1.3:76034794-76034813 | MS.gene74969:intron | 40.0% | |
| GCACGATTATCCGTTGTTTA+AGG | - | chr1.3:76034281-76034300 | MS.gene74969:intron | 40.0% | |
| GCTGCATCGGAAAAAGATTT+AGG | - | chr1.3:76038006-76038025 | MS.gene74969:intron | 40.0% | |
| GGCTACTATTTAGAGATGGA+GGG | + | chr1.3:76034245-76034264 | None:intergenic | 40.0% | |
| GGGGAAAACTACTTACAACT+AGG | + | chr1.3:76035848-76035867 | None:intergenic | 40.0% | |
| GTTAGCAAGAATGAGTAACG+GGG | + | chr1.3:76034160-76034179 | None:intergenic | 40.0% | |
| TACCAGTCTAAAAAGACCAG+AGG | + | chr1.3:76035325-76035344 | None:intergenic | 40.0% | |
| TAGTTAGAGAGGGTTAGAGT+AGG | - | chr1.3:76037552-76037571 | MS.gene74969:intron | 40.0% | |
| TATAAAAGGGGCCTGTGTTT+AGG | - | chr1.3:76035711-76035730 | MS.gene74969:intron | 40.0% | |
| TATGCTTTACTTGGCTGTCT+AGG | - | chr1.3:76036119-76036138 | MS.gene74969:intron | 40.0% | |
| TCAGTCTCCTGTAAAGTATG+AGG | + | chr1.3:76037940-76037959 | None:intergenic | 40.0% | |
| TCCGTCTCACACGAATTAAT+TGG | + | chr1.3:76034824-76034843 | None:intergenic | 40.0% | |
| TGGACTTAGGTAGTTAGAGA+GGG | - | chr1.3:76037542-76037561 | MS.gene74969:intron | 40.0% | |
| TGTAAAGTATGAGGTTGACG+GGG | + | chr1.3:76037931-76037950 | None:intergenic | 40.0% | |
| TTGGGCTGCTTAATTGATAC+TGG | - | chr1.3:76038235-76038254 | MS.gene74969:intron | 40.0% | |
| ! | AGGCTTGTTCGTTAAGTAGA+TGG | + | chr1.3:76036044-76036063 | None:intergenic | 40.0% |
| ! | TAAAGTGGTGATGACTGACA+AGG | + | chr1.3:76037485-76037504 | None:intergenic | 40.0% |
| ! | TGCACAACAATCTCAGGTTT+TGG | - | chr1.3:76039287-76039306 | MS.gene74969:CDS | 40.0% |
| ! | TTTGTGCTGGTGTAAGATAG+TGG | - | chr1.3:76035234-76035253 | MS.gene74969:intron | 40.0% |
| !! | GCATCCCATATAACTTGTTG+TGG | - | chr1.3:76037878-76037897 | MS.gene74969:intron | 40.0% |
| !! | TTTTAGGTAGACCTCTGCTT+CGG | - | chr1.3:76037326-76037345 | MS.gene74969:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.3:76034704-76034723 | MS.gene74969:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.3:76034723-76034704 | None:intergenic | 40.0% |
| AAGAAAAAACCCCGAAGCAG+AGG | + | chr1.3:76037340-76037359 | None:intergenic | 45.0% | |
| ACAACTAGGTGACTGTCATG+TGG | + | chr1.3:76035834-76035853 | None:intergenic | 45.0% | |
| ATGGGCCTCTATGCTTTACT+TGG | - | chr1.3:76036110-76036129 | MS.gene74969:intron | 45.0% | |
| ATTTGAAGAGGTGGCTGCAT+CGG | - | chr1.3:76037993-76038012 | MS.gene74969:intron | 45.0% | |
| CACTCTACAGCCTCTGATAA+AGG | + | chr1.3:76039103-76039122 | None:intergenic | 45.0% | |
| CATAGATGCAAACCTCCTCT+TGG | + | chr1.3:76038601-76038620 | None:intergenic | 45.0% | |
| CCAAGGATGATCTTGTCCTA+AGG | - | chr1.3:76035894-76035913 | MS.gene74969:intron | 45.0% | |
| CCGTCAACCTCATACTTTAC+AGG | - | chr1.3:76037930-76037949 | MS.gene74969:CDS | 45.0% | |
| CCTGCAGAGCGAAAAAAAGT+GGG | + | chr1.3:76038968-76038987 | None:intergenic | 45.0% | |
| CCTTAGGACAAGATCATCCT+TGG | + | chr1.3:76035897-76035916 | None:intergenic | 45.0% | |
| CGGCTACTATTTAGAGATGG+AGG | + | chr1.3:76034246-76034265 | None:intergenic | 45.0% | |
| GACACGGTGATGTGGTTATT+GGG | - | chr1.3:76035520-76035539 | MS.gene74969:intron | 45.0% | |
| GACAGCCAAGTAAAGCATAG+AGG | + | chr1.3:76036118-76036137 | None:intergenic | 45.0% | |
| GTCTCCAATCCTAGAAAACC+TGG | - | chr1.3:76034185-76034204 | MS.gene74969:intron | 45.0% | |
| GTGGACTTAGGTAGTTAGAG+AGG | - | chr1.3:76037541-76037560 | MS.gene74969:intron | 45.0% | |
| TAGTCATCCTCACTATGGAC+AGG | - | chr1.3:76034089-76034108 | MS.gene74969:CDS | 45.0% | |
| TATGCCAAACACTTCACCCA+GGG | + | chr1.3:76037223-76037242 | None:intergenic | 45.0% | |
| TCTGCAGGGTTTGATTGCTA+AGG | - | chr1.3:76038980-76038999 | MS.gene74969:intron | 45.0% | |
| TCTTGGAGCTCTTCTTGACA+CGG | - | chr1.3:76035504-76035523 | MS.gene74969:intron | 45.0% | |
| TGACACGGTGATGTGGTTAT+TGG | - | chr1.3:76035519-76035538 | MS.gene74969:intron | 45.0% | |
| TGCAGTAGATTCAGCTTCAC+TGG | - | chr1.3:76034994-76035013 | MS.gene74969:intron | 45.0% | |
| TGTACATCGAGACAGCAGAT+AGG | - | chr1.3:76038796-76038815 | MS.gene74969:intron | 45.0% | |
| TTATGCCAAACACTTCACCC+AGG | + | chr1.3:76037224-76037243 | None:intergenic | 45.0% | |
| TTTAAGTGGAATATGGCGGC+AGG | + | chr1.3:76037765-76037784 | None:intergenic | 45.0% | |
| TTTAGGTAGACCTCTGCTTC+GGG | - | chr1.3:76037327-76037346 | MS.gene74969:intron | 45.0% | |
| ! | AGGCCCCTTTTATAACGACT+TGG | + | chr1.3:76035705-76035724 | None:intergenic | 45.0% |
| ! | GGGTGAAGTGTTTGGCATAA+AGG | - | chr1.3:76037224-76037243 | MS.gene74969:intron | 45.0% |
| !! | ACCCTCTGGTCTTTTTAGAC+TGG | - | chr1.3:76035320-76035339 | MS.gene74969:intron | 45.0% |
| !! | CAATATCTGTTTCTGGCGTC+CGG | + | chr1.3:76039335-76039354 | None:intergenic | 45.0% |
| !! | CTTAGCTTTGGTGATCGTCT+TGG | - | chr1.3:76035487-76035506 | MS.gene74969:intron | 45.0% |
| !!! | CCACTTTTTTTCGCTCTGCA+GGG | - | chr1.3:76038966-76038985 | MS.gene74969:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.3:76034703-76034722 | MS.gene74969:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.3:76034722-76034703 | None:intergenic | 45.0% |
| !!! | TGAGCCAGGTTTTCTAGGAT+TGG | + | chr1.3:76034192-76034211 | None:intergenic | 45.0% |
| !!! | TATAATTATTTTAAAGAATA+AGG | + | chr1.3:76037652-76037671 | None:intergenic | 5.0% |
| !!! | TTTTATTGTTAATATTTAAA+TGG | - | chr1.3:76038120-76038139 | MS.gene74969:intron | 5.0% |
| AAAGGGAACTGTCTCCACTG+AGG | - | chr1.3:76036237-76036256 | MS.gene74969:intron | 50.0% | |
| AAGGGAACTGTCTCCACTGA+GGG | - | chr1.3:76036238-76036257 | MS.gene74969:intron | 50.0% | |
| ACGGGGACTTGGGTATTATG+GGG | + | chr1.3:76037914-76037933 | None:intergenic | 50.0% | |
| ACTGTCTGCGTTACTACCTC+CGG | - | chr1.3:76039313-76039332 | MS.gene74969:CDS | 50.0% | |
| CCCTGCAGAGCGAAAAAAAG+TGG | + | chr1.3:76038969-76038988 | None:intergenic | 50.0% | |
| CTAGTTGTTCACTGGACTCC+TGG | + | chr1.3:76037200-76037219 | None:intergenic | 50.0% | |
| CTCACGCTACACCACAAAAC+AGG | + | chr1.3:76036384-76036403 | None:intergenic | 50.0% | |
| CTCACTATGGACAGGCTATC+CGG | - | chr1.3:76034097-76034116 | MS.gene74969:intron | 50.0% | |
| CTCTTCTTGACACGGTGATG+TGG | - | chr1.3:76035512-76035531 | MS.gene74969:intron | 50.0% | |
| GACGGGGACTTGGGTATTAT+GGG | + | chr1.3:76037915-76037934 | None:intergenic | 50.0% | |
| GCTGTCAACAGCCTAAACAC+AGG | + | chr1.3:76035725-76035744 | None:intergenic | 50.0% | |
| GGTGACTGTCATGTGGATGT+CGG | + | chr1.3:76035827-76035846 | None:intergenic | 50.0% | |
| GTCTGTGTCTGAGTTTGTGC+TGG | - | chr1.3:76035221-76035240 | MS.gene74969:intron | 50.0% | |
| GTGACTGTCATGTGGATGTC+GGG | + | chr1.3:76035826-76035845 | None:intergenic | 50.0% | |
| TATGAGGTTGACGGGGACTT+GGG | + | chr1.3:76037924-76037943 | None:intergenic | 50.0% | |
| TCCAGTGAACAACTAGCCCT+GGG | - | chr1.3:76037204-76037223 | MS.gene74969:intron | 50.0% | |
| TGACGGGGACTTGGGTATTA+TGG | + | chr1.3:76037916-76037935 | None:intergenic | 50.0% | |
| TTAAGGAAGATGGGCCCAAG+AGG | - | chr1.3:76038583-76038602 | MS.gene74969:intron | 50.0% | |
| TTAGGTAGACCTCTGCTTCG+GGG | - | chr1.3:76037328-76037347 | MS.gene74969:intron | 50.0% | |
| !!! | CCCACTTTTTTTCGCTCTGC+AGG | - | chr1.3:76038965-76038984 | MS.gene74969:intron | 50.0% |
| AGTCAGAGACAGACGGAAGC+AGG | + | chr1.3:76038916-76038935 | None:intergenic | 55.0% | |
| ATCGAGACAGCAGATAGGCC+AGG | - | chr1.3:76038801-76038820 | MS.gene74969:intron | 55.0% | |
| CGGATAGCCTGTCCATAGTG+AGG | + | chr1.3:76034099-76034118 | None:intergenic | 55.0% | |
| GCACACAAGCTACGCATGTG+TGG | + | chr1.3:76035161-76035180 | None:intergenic | 55.0% | |
| GTATGAGGTTGACGGGGACT+TGG | + | chr1.3:76037925-76037944 | None:intergenic | 55.0% | |
| GTCCAGTGAACAACTAGCCC+TGG | - | chr1.3:76037203-76037222 | MS.gene74969:intron | 55.0% | |
| GTCGGCTGAGATCGATACAG+AGG | - | chr1.3:76038875-76038894 | MS.gene74969:intron | 55.0% | |
| TCGAGACAGCAGATAGGCCA+GGG | - | chr1.3:76038802-76038821 | MS.gene74969:intron | 55.0% | |
| TTGCTTCACTGGTCCCTCAG+TGG | + | chr1.3:76036254-76036273 | None:intergenic | 55.0% | |
| ! | CGCATGTGTGGTGTCAACTG+TGG | + | chr1.3:76035149-76035168 | None:intergenic | 55.0% |
| ! | CTAGCCCTGGGTGAAGTGTT+TGG | - | chr1.3:76037216-76037235 | MS.gene74969:intron | 55.0% |
| ! | TGCGCTGAGCCAGGTTTTCT+AGG | + | chr1.3:76034197-76034216 | None:intergenic | 55.0% |
| !! | ACCCAGGGCTAGTTGTTCAC+TGG | + | chr1.3:76037208-76037227 | None:intergenic | 55.0% |
| !! | TATCTGTTTCTGGCGTCCGG+AGG | + | chr1.3:76039332-76039351 | None:intergenic | 55.0% |
| AGGAAGATGGGCCCAAGAGG+AGG | - | chr1.3:76038586-76038605 | MS.gene74969:intron | 60.0% | |
| CAGACGGAAGCAGGACAGAG+AGG | + | chr1.3:76038907-76038926 | None:intergenic | 60.0% | |
| CAGGCTATCCGGCATTCAGC+TGG | - | chr1.3:76034108-76034127 | MS.gene74969:intron | 60.0% | |
| AACAGTGGCTGCGCTGAGCC+AGG | + | chr1.3:76034206-76034225 | None:intergenic | 65.0% | |
| ATGGAGGGAGGGGGTGGCTA+CGG | - | chr1.3:76034051-76034070 | MS.gene74969:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76034051 | 76039365 | 76034051 | ID=MS.gene74969 |
| chr1.3 | mRNA | 76034051 | 76039365 | 76034051 | ID=MS.gene74969.t1;Parent=MS.gene74969 |
| chr1.3 | exon | 76039287 | 76039365 | 76039287 | ID=MS.gene74969.t1.exon1;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76039287 | 76039365 | 76039287 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76038075 | 76038078 | 76038075 | ID=MS.gene74969.t1.exon2;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76038075 | 76038078 | 76038075 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76037891 | 76037990 | 76037891 | ID=MS.gene74969.t1.exon3;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76037891 | 76037990 | 76037891 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76037120 | 76037214 | 76037120 | ID=MS.gene74969.t1.exon4;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76037120 | 76037214 | 76037120 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76036408 | 76036492 | 76036408 | ID=MS.gene74969.t1.exon5;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76036408 | 76036492 | 76036408 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76036156 | 76036215 | 76036156 | ID=MS.gene74969.t1.exon6;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76036156 | 76036215 | 76036156 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76034809 | 76034864 | 76034809 | ID=MS.gene74969.t1.exon7;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76034809 | 76034864 | 76034809 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76034520 | 76034625 | 76034520 | ID=MS.gene74969.t1.exon8;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76034520 | 76034625 | 76034520 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76034361 | 76034429 | 76034361 | ID=MS.gene74969.t1.exon9;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76034361 | 76034429 | 76034361 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| chr1.3 | exon | 76034051 | 76034113 | 76034051 | ID=MS.gene74969.t1.exon10;Parent=MS.gene74969.t1 |
| chr1.3 | CDS | 76034051 | 76034113 | 76034051 | ID=cds.MS.gene74969.t1;Parent=MS.gene74969.t1 |
| Gene Sequence |
| Protein sequence |
