Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75417.t1 | XP_003602068.1 | 92.7 | 413 | 23 | 1 | 1 | 406 | 1 | 413 | 6.70E-209 | 736.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75417.t1 | P30124 | 93.5 | 398 | 18 | 2 | 17 | 406 | 1 | 398 | 1.3e-192 | 673.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75417.t1 | G7J506 | 92.7 | 413 | 23 | 1 | 1 | 406 | 1 | 413 | 4.8e-209 | 736.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene75417 | -0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene05087 | MS.gene75417 | 0.836213 | 1.07E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene75417 | -0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene75417 | -0.812194 | 4.79E-51 | -1.69E-46 |
| MS.gene055634 | MS.gene75417 | 0.818177 | 2.25E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene75417 | 0.914074 | 2.94E-84 | -1.69E-46 |
| MS.gene059026 | MS.gene75417 | 0.846087 | 2.71E-59 | -1.69E-46 |
| MS.gene060522 | MS.gene75417 | -0.808261 | 3.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75417.t1 | MTR_3g088610 | 97.094 | 413 | 5 | 1 | 1 | 406 | 1 | 413 | 0.0 | 818 |
| MS.gene75417.t1 | MTR_3g088610 | 96.936 | 359 | 4 | 1 | 1 | 352 | 1 | 359 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75417.t1 | AT1G69740 | 77.546 | 432 | 66 | 4 | 3 | 406 | 2 | 430 | 0.0 | 640 |
| MS.gene75417.t1 | AT1G69740 | 77.546 | 432 | 66 | 4 | 3 | 406 | 2 | 430 | 0.0 | 640 |
| MS.gene75417.t1 | AT1G69740 | 77.546 | 432 | 66 | 4 | 3 | 406 | 2 | 430 | 0.0 | 640 |
| MS.gene75417.t1 | AT1G44318 | 71.347 | 349 | 90 | 3 | 62 | 406 | 59 | 401 | 0.0 | 511 |
Find 101 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAAGCATCTGGAATTT+TGG | 0.073758 | 3.3:-73442864 | None:intergenic |
| CTTTATTCACAACAGGTTTC+TGG | 0.142989 | 3.3:+73445751 | MS.gene75417:intron |
| GAAGCCTGGGCTTCCTTATT+TGG | 0.157019 | 3.3:+73444962 | MS.gene75417:CDS |
| TACACATCGATCCGCGTTTC+AGG | 0.190551 | 3.3:+73441860 | MS.gene75417:CDS |
| GAGTCCAATGCTTCCCTAAA+TGG | 0.193544 | 3.3:-73444633 | None:intergenic |
| AACGTTGGTGTGTGAATTTA+AGG | 0.252371 | 3.3:-73441497 | None:intergenic |
| TCATGCCCATCTGAAGAATA+TGG | 0.266166 | 3.3:-73443169 | None:intergenic |
| TTTAAGGTTAAGGGTGTGTT+TGG | 0.329848 | 3.3:-73441481 | None:intergenic |
| TGGTGAGTACTCGATGATTA+AGG | 0.335831 | 3.3:+73445771 | MS.gene75417:CDS |
| CAAAATTCCAGATGCTTTGA+AGG | 0.350403 | 3.3:+73442865 | MS.gene75417:CDS |
| GTGTGTGAATTTAAGGTTAA+GGG | 0.356716 | 3.3:-73441490 | None:intergenic |
| AGCCTTATGATATCCAAATA+AGG | 0.360550 | 3.3:-73444975 | None:intergenic |
| AAAGCCTCTCTGTAGTTTGC+CGG | 0.370396 | 3.3:-73444796 | None:intergenic |
| TTCCTTATTTGGATATCATA+AGG | 0.373814 | 3.3:+73444973 | MS.gene75417:CDS |
| CTGTGTTCACTTACAAGATC+AGG | 0.387731 | 3.3:-73443040 | None:intergenic |
| AATAGAACCTTCAAAGCATC+TGG | 0.395086 | 3.3:-73442872 | None:intergenic |
| TGTCAGCACCGGCACGTCTA+AGG | 0.398953 | 3.3:-73445852 | None:intergenic |
| CTTGTAGAGCAAAATATGTT+AGG | 0.407581 | 3.3:-73445879 | None:intergenic |
| CCTACACCGGCTGCACCTGC+TGG | 0.413535 | 3.3:+73441670 | MS.gene75417:CDS |
| CATCCGGGCATAGCACCAAT+TGG | 0.415152 | 3.3:-73442217 | None:intergenic |
| GGCGGTACAGGAGGCGCATC+CGG | 0.419126 | 3.3:-73441649 | None:intergenic |
| GCAGCCGGTGTAGGCGGTAC+AGG | 0.421060 | 3.3:-73441661 | None:intergenic |
| AGTCCAATGCTTCCCTAAAT+GGG | 0.431083 | 3.3:-73444632 | None:intergenic |
| AGAAGGAGCTGATATTCTAT+TGG | 0.434691 | 3.3:+73444843 | MS.gene75417:CDS |
| TAGTTCTTCAATGGTAGTGC+TGG | 0.437216 | 3.3:-73441529 | None:intergenic |
| ATCCGGGCATAGCACCAATT+GGG | 0.443550 | 3.3:-73442216 | None:intergenic |
| TTCGAAGCCGCTGTTGTCGC+TGG | 0.446142 | 3.3:+73441619 | MS.gene75417:CDS |
| CCAACCAAGCCTGTAGCATC+CGG | 0.454753 | 3.3:-73442233 | None:intergenic |
| TAAAATGATTGATGAAGAAA+AGG | 0.462660 | 3.3:+73445807 | MS.gene75417:CDS |
| TGGCCCATTTAGGGAAGCAT+TGG | 0.464040 | 3.3:+73444629 | MS.gene75417:CDS |
| TCGAACTATACGATTACTTA+AGG | 0.469401 | 3.3:+73443009 | MS.gene75417:CDS |
| AGAACCTGGTATGCTGCAAT+TGG | 0.471730 | 3.3:-73445020 | None:intergenic |
| TTGCATGTGCAGGTGAAGCC+TGG | 0.473131 | 3.3:+73444948 | MS.gene75417:intron |
| CCAGCAGGTGCAGCCGGTGT+AGG | 0.473347 | 3.3:-73441670 | None:intergenic |
| GGCGTTCCAGCAGGTGCAGC+CGG | 0.474188 | 3.3:-73441676 | None:intergenic |
| TTGTATGCCTCATCTCCTGT+GGG | 0.474392 | 3.3:-73442968 | None:intergenic |
| GGTGAGGAGGACACCCCAAT+TGG | 0.474774 | 3.3:+73442202 | MS.gene75417:intron |
| GTCACCACTGGCGTTCCAGC+AGG | 0.476216 | 3.3:-73441685 | None:intergenic |
| GTGCTATGCCCGGATGCTAC+AGG | 0.477134 | 3.3:+73442224 | MS.gene75417:CDS |
| ACCCCAATTGGTGCTATGCC+CGG | 0.482806 | 3.3:+73442214 | MS.gene75417:CDS |
| GACCACATCTGCTCCAGCAC+GGG | 0.485822 | 3.3:-73443873 | None:intergenic |
| GGCTTCGAAATCTGCATCAC+TGG | 0.486265 | 3.3:-73441605 | None:intergenic |
| GGTGTGTGAATTTAAGGTTA+AGG | 0.494498 | 3.3:-73441491 | None:intergenic |
| AAGCCTCTCTGTAGTTTGCC+GGG | 0.500631 | 3.3:-73444795 | None:intergenic |
| AAGCTCAAATAGTTCTTCAA+TGG | 0.500921 | 3.3:-73441538 | None:intergenic |
| TGATGAAGAAAAGGTGATGA+TGG | 0.507074 | 3.3:+73445816 | MS.gene75417:CDS |
| CGACCATCCATCATATCGCT+GGG | 0.509074 | 3.3:-73443899 | None:intergenic |
| GACGGCATTGTTAGAGAAGA+TGG | 0.510196 | 3.3:+73443190 | MS.gene75417:CDS |
| CATGCCCATCTGAAGAATAT+GGG | 0.510541 | 3.3:-73443168 | None:intergenic |
| ACGACCATCCATCATATCGC+TGG | 0.517199 | 3.3:-73443900 | None:intergenic |
| AGTGGATAAACAAAATTAGC+AGG | 0.519439 | 3.3:-73441897 | None:intergenic |
| TTAAGTAATCGTATAGTTCG+AGG | 0.519833 | 3.3:-73443007 | None:intergenic |
| CGAGCAGCTCTCGATGCTGA+AGG | 0.524524 | 3.3:+73443935 | MS.gene75417:CDS |
| GCTGCCAATTGCAGCATACC+AGG | 0.526983 | 3.3:+73445016 | MS.gene75417:CDS |
| GGCCCGTGCTGGAGCAGATG+TGG | 0.528623 | 3.3:+73443871 | MS.gene75417:intron |
| CTCGATGATTAAGGCTGGTG+GGG | 0.530917 | 3.3:+73445780 | MS.gene75417:CDS |
| TGACCACATCTGCTCCAGCA+CGG | 0.535344 | 3.3:-73443874 | None:intergenic |
| TAATTCAGGTTGCAAAAGCA+CGG | 0.536608 | 3.3:+73442810 | MS.gene75417:intron |
| GTTGCAAAAGCACGGGATGT+TGG | 0.543180 | 3.3:+73442818 | MS.gene75417:CDS |
| GGTCAGCCCCAGCGATATGA+TGG | 0.544470 | 3.3:+73443892 | MS.gene75417:CDS |
| TACAGGCTTGGTTGGAGACA+CGG | 0.544880 | 3.3:+73442241 | MS.gene75417:CDS |
| GCAGGTGCAGCCGGTGTAGG+CGG | 0.548510 | 3.3:-73441667 | None:intergenic |
| TACTCGATGATTAAGGCTGG+TGG | 0.549281 | 3.3:+73445778 | MS.gene75417:CDS |
| TTAGACCCATATTCTTCAGA+TGG | 0.549974 | 3.3:+73443163 | MS.gene75417:CDS |
| ATTGTATGCCTCATCTCCTG+TGG | 0.553141 | 3.3:-73442969 | None:intergenic |
| GATGAGGCATACAATGAGAA+TGG | 0.554516 | 3.3:+73442977 | MS.gene75417:CDS |
| ATGCCCGGATGCTACAGGCT+TGG | 0.560235 | 3.3:+73442229 | MS.gene75417:CDS |
| TGCATGTGCAGGTGAAGCCT+GGG | 0.561269 | 3.3:+73444949 | MS.gene75417:intron |
| ATATCCAAATAAGGAAGCCC+AGG | 0.561431 | 3.3:-73444966 | None:intergenic |
| GAGAGGCTTTGACTGAAATG+AGG | 0.562495 | 3.3:+73444809 | MS.gene75417:CDS |
| AATTCAGGTTGCAAAAGCAC+GGG | 0.565064 | 3.3:+73442811 | MS.gene75417:intron |
| TAGACCCATATTCTTCAGAT+GGG | 0.565926 | 3.3:+73443164 | MS.gene75417:CDS |
| ACTCGATGATTAAGGCTGGT+GGG | 0.569222 | 3.3:+73445779 | MS.gene75417:CDS |
| CCGGATGCTACAGGCTTGGT+TGG | 0.571140 | 3.3:+73442233 | MS.gene75417:CDS |
| CAACCAAGCCTGTAGCATCC+GGG | 0.572018 | 3.3:-73442232 | None:intergenic |
| TGGTATGCTGCAATTGGCAG+CGG | 0.572258 | 3.3:-73445014 | None:intergenic |
| TTGTAAACAAGCTGTAGCCC+AGG | 0.575741 | 3.3:+73443675 | MS.gene75417:CDS |
| TGTTGTCGCTGGTAATGTGC+CGG | 0.576305 | 3.3:+73441630 | MS.gene75417:CDS |
| TGCACCTGCTGGAACGCCAG+TGG | 0.583715 | 3.3:+73441681 | MS.gene75417:CDS |
| TTACTGTGCCTTAGACGTGC+CGG | 0.589296 | 3.3:+73445844 | MS.gene75417:CDS |
| GTATGCCTCATCTCCTGTGG+GGG | 0.598288 | 3.3:-73442966 | None:intergenic |
| AGAGGCTTTGACTGAAATGA+GGG | 0.601731 | 3.3:+73444810 | MS.gene75417:CDS |
| TATTCTTCAGATGGGCATGA+CGG | 0.608908 | 3.3:+73443172 | MS.gene75417:CDS |
| GAGACACGGACTGTTGCAAG+AGG | 0.609699 | 3.3:+73442255 | MS.gene75417:CDS |
| TGCTGGTTTAAGATCAACGT+TGG | 0.610444 | 3.3:-73441512 | None:intergenic |
| TGTTAGGATGATGTCAGCAC+CGG | 0.612290 | 3.3:-73445863 | None:intergenic |
| GCCGGTGTAGGCGGTACAGG+AGG | 0.615236 | 3.3:-73441658 | None:intergenic |
| TGTGTTCACTTACAAGATCA+GGG | 0.616355 | 3.3:-73443039 | None:intergenic |
| AGCCCCAGCGATATGATGGA+TGG | 0.618898 | 3.3:+73443896 | MS.gene75417:CDS |
| ATGAGGGAAGATGAATCAGA+AGG | 0.619265 | 3.3:+73444826 | MS.gene75417:CDS |
| GAGTACTCGATGATTAAGGC+TGG | 0.624101 | 3.3:+73445775 | MS.gene75417:CDS |
| TCCGGGCATAGCACCAATTG+GGG | 0.638719 | 3.3:-73442215 | None:intergenic |
| TGTATGCCTCATCTCCTGTG+GGG | 0.643917 | 3.3:-73442967 | None:intergenic |
| CAAAAGCTATCAGATGAACC+CGG | 0.644138 | 3.3:+73444777 | MS.gene75417:intron |
| CACATTACCAGCGACAACAG+CGG | 0.644957 | 3.3:-73441626 | None:intergenic |
| GCCTCCTGTACCGCCTACAC+CGG | 0.648035 | 3.3:+73441657 | MS.gene75417:CDS |
| GATATGATGGATGGTCGTGT+TGG | 0.663532 | 3.3:+73443905 | MS.gene75417:CDS |
| TAAAGTTGTTTCCTGAAACG+CGG | 0.676695 | 3.3:-73441871 | None:intergenic |
| GACCATCCATCATATCGCTG+GGG | 0.723541 | 3.3:-73443898 | None:intergenic |
| GAACCCGGCAAACTACAGAG+AGG | 0.774109 | 3.3:+73444792 | MS.gene75417:CDS |
| GCTGATCTTCTATTACGACG+AGG | 0.800899 | 3.3:-73441837 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGTTTAGTAAAAAGA+AGG | + | chr3.3:73444096-73444115 | MS.gene75417:intron | 15.0% |
| !! | TAAACTAAAATTCAATACTA+AGG | - | chr3.3:73442772-73442791 | None:intergenic | 15.0% |
| !! | TTTAGAAGATAAAAAAGAAA+AGG | - | chr3.3:73442715-73442734 | None:intergenic | 15.0% |
| !!! | AATTTCTATTTTTGTAGAAT+TGG | - | chr3.3:73444485-73444504 | None:intergenic | 15.0% |
| !!! | TAATCTAAACATTTTACATT+TGG | + | chr3.3:73443331-73443350 | MS.gene75417:intron | 15.0% |
| !!! | TTGTGTTTTTATTTTATGAA+AGG | + | chr3.3:73443850-73443869 | MS.gene75417:intron | 15.0% |
| !! | AAATTAAAAAAGAAATCGTC+GGG | + | chr3.3:73443459-73443478 | MS.gene75417:intron | 20.0% |
| !! | GAAATTAAAAAAGAAATCGT+CGG | + | chr3.3:73443458-73443477 | MS.gene75417:intron | 20.0% |
| !! | TAAAATGATTGATGAAGAAA+AGG | + | chr3.3:73445807-73445826 | MS.gene75417:CDS | 20.0% |
| !! | TATATTCTACCAAAAATTGA+TGG | - | chr3.3:73442913-73442932 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTTATGTTTGTTT+GGG | - | chr3.3:73442698-73442717 | None:intergenic | 20.0% |
| !!! | AGATTATGCAGATATTTTTT+TGG | + | chr3.3:73442501-73442520 | MS.gene75417:intron | 20.0% |
| !!! | ATGTTTTTTTTTTACAGCAA+TGG | - | chr3.3:73442471-73442490 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAATTTCTTTTCC+AGG | - | chr3.3:73443452-73443471 | None:intergenic | 20.0% |
| !!! | TTATATTTTTATATCGAGCT+GGG | + | chr3.3:73445085-73445104 | MS.gene75417:intron | 20.0% |
| !!! | TTGAGAATGTTATATTTTTC+TGG | + | chr3.3:73443072-73443091 | MS.gene75417:intron | 20.0% |
| !!! | TTTTCCAGGAATAATATTAA+AGG | - | chr3.3:73443438-73443457 | None:intergenic | 20.0% |
| ! | AAAGATGTAGTTATATTACC+TGG | - | chr3.3:73443696-73443715 | None:intergenic | 25.0% |
| ! | AAATTTAGCTGAGAAAATGT+TGG | + | chr3.3:73442363-73442382 | MS.gene75417:intron | 25.0% |
| ! | AAGATGTAGTTATATTACCT+GGG | - | chr3.3:73443695-73443714 | None:intergenic | 25.0% |
| ! | AATTGACTGCTTTAATCTTA+AGG | - | chr3.3:73445656-73445675 | None:intergenic | 25.0% |
| ! | ACTAAATTATGTTAGTGTCT+TGG | - | chr3.3:73443830-73443849 | None:intergenic | 25.0% |
| ! | AGAAATTATGACTAACAAGA+TGG | + | chr3.3:73444498-73444517 | MS.gene75417:intron | 25.0% |
| ! | AGATAAGATACAAAAACAGT+TGG | + | chr3.3:73445550-73445569 | MS.gene75417:intron | 25.0% |
| ! | ATAACTCCTACAAGATATTA+AGG | - | chr3.3:73443628-73443647 | None:intergenic | 25.0% |
| ! | ATCATGTTCTGTAACAAAAT+AGG | - | chr3.3:73443261-73443280 | None:intergenic | 25.0% |
| ! | ATGATTTGAACTATTCTTGA+AGG | + | chr3.3:73443545-73443564 | MS.gene75417:intron | 25.0% |
| ! | ATTGACTGCTTTAATCTTAA+GGG | - | chr3.3:73445655-73445674 | None:intergenic | 25.0% |
| ! | CATCATTAACATAAAACCAA+AGG | - | chr3.3:73445687-73445706 | None:intergenic | 25.0% |
| ! | GTATATCCTTAATATCTTGT+AGG | + | chr3.3:73443619-73443638 | MS.gene75417:intron | 25.0% |
| ! | GTTGTTCATCATAGATATTA+TGG | + | chr3.3:73445606-73445625 | MS.gene75417:intron | 25.0% |
| ! | TAACCTTCATGTATAAAAAG+TGG | - | chr3.3:73441918-73441937 | None:intergenic | 25.0% |
| ! | TCTTTCCAAAAATGGTTAAT+CGG | + | chr3.3:73445187-73445206 | MS.gene75417:intron | 25.0% |
| ! | TGTACCTTTAATATTATTCC+TGG | + | chr3.3:73443431-73443450 | MS.gene75417:intron | 25.0% |
| ! | TTATGTATACGATCATAGTT+AGG | + | chr3.3:73444880-73444899 | MS.gene75417:intron | 25.0% |
| !! | AACATTTTACATTTGGATGA+TGG | + | chr3.3:73443338-73443357 | MS.gene75417:intron | 25.0% |
| !! | AATTTTATTCTTTACCGATC+TGG | + | chr3.3:73442527-73442546 | MS.gene75417:intron | 25.0% |
| !! | AGAGTTTGGATAGATTTTAT+TGG | + | chr3.3:73442554-73442573 | MS.gene75417:intron | 25.0% |
| !! | ATTCAAAAGTGGTATTGAAT+TGG | + | chr3.3:73442433-73442452 | MS.gene75417:intron | 25.0% |
| !! | CGCTTTATTGTAATAAACTT+TGG | + | chr3.3:73445423-73445442 | MS.gene75417:intron | 25.0% |
| !! | GAGTTTGGATAGATTTTATT+GGG | + | chr3.3:73442555-73442574 | MS.gene75417:intron | 25.0% |
| !! | TATCATGCATATTTTCTTGT+CGG | + | chr3.3:73444542-73444561 | MS.gene75417:intron | 25.0% |
| !! | TTATTGACTACAATCAAGAA+AGG | - | chr3.3:73443584-73443603 | None:intergenic | 25.0% |
| !! | TTCAAAAGTGGTATTGAATT+GGG | + | chr3.3:73442434-73442453 | MS.gene75417:intron | 25.0% |
| !! | TTCCTTATTTGGATATCATA+AGG | + | chr3.3:73444973-73444992 | MS.gene75417:CDS | 25.0% |
| !! | TTCTAAATTATGCCGTTTAT+TGG | + | chr3.3:73444578-73444597 | MS.gene75417:intron | 25.0% |
| !!! | AAAAAGATTTTGACGACAAA+AGG | - | chr3.3:73443232-73443251 | None:intergenic | 25.0% |
| !!! | AAGTTACCATTATTTTGTTC+AGG | + | chr3.3:73443738-73443757 | MS.gene75417:intron | 25.0% |
| !!! | AATTCAATACCACTTTTGAA+TGG | - | chr3.3:73442434-73442453 | None:intergenic | 25.0% |
| !!! | AGTTACCATTATTTTGTTCA+GGG | + | chr3.3:73443739-73443758 | MS.gene75417:intron | 25.0% |
| !!! | CTTATATTTTTATATCGAGC+TGG | + | chr3.3:73445084-73445103 | MS.gene75417:intron | 25.0% |
| !!! | GAAAAGGTTTTATGTTTGTT+TGG | - | chr3.3:73442699-73442718 | None:intergenic | 25.0% |
| !!! | GGCATTTTTTTTTATTGATC+TGG | + | chr3.3:73444158-73444177 | MS.gene75417:intron | 25.0% |
| !!! | TAAACTTATTTCTAAAGCTC+AGG | - | chr3.3:73444087-73444106 | None:intergenic | 25.0% |
| !!! | TAACCATTTTTGGAAAGAAT+CGG | - | chr3.3:73445185-73445204 | None:intergenic | 25.0% |
| !!! | TATATTTTTATATCGAGCTG+GGG | + | chr3.3:73445086-73445105 | MS.gene75417:intron | 25.0% |
| !!! | TATCCACTTTTTATACATGA+AGG | + | chr3.3:73441912-73441931 | MS.gene75417:CDS | 25.0% |
| !!! | TGATTTTTTTGTGTGTGTTT+TGG | + | chr3.3:73441788-73441807 | MS.gene75417:intron | 25.0% |
| AAACTCTTGTGAAACTGTTT+CGG | + | chr3.3:73441986-73442005 | MS.gene75417:intron | 30.0% | |
| AAATCGACAATTGCTAATGA+TGG | + | chr3.3:73444136-73444155 | MS.gene75417:intron | 30.0% | |
| AAGCTCAAATAGTTCTTCAA+TGG | - | chr3.3:73441541-73441560 | None:intergenic | 30.0% | |
| AAGTATAGCAAGAAAAACCT+TGG | - | chr3.3:73443796-73443815 | None:intergenic | 30.0% | |
| AATCCGATTCTTTCCAAAAA+TGG | + | chr3.3:73445179-73445198 | MS.gene75417:intron | 30.0% | |
| AATCGACAATTGCTAATGAT+GGG | + | chr3.3:73444137-73444156 | MS.gene75417:intron | 30.0% | |
| AGAAACCTGTTGTGAATAAA+GGG | - | chr3.3:73445752-73445771 | None:intergenic | 30.0% | |
| AGAATCCCTGAACAAAATAA+TGG | - | chr3.3:73443747-73443766 | None:intergenic | 30.0% | |
| AGTCAATTAGAGAAAACCTT+TGG | + | chr3.3:73445668-73445687 | MS.gene75417:intron | 30.0% | |
| AGTGGATAAACAAAATTAGC+AGG | - | chr3.3:73441900-73441919 | None:intergenic | 30.0% | |
| ATGACATTACCATTCAAAAG+TGG | + | chr3.3:73442422-73442441 | MS.gene75417:intron | 30.0% | |
| CAGAACATGATTCATTTCAT+TGG | + | chr3.3:73443270-73443289 | MS.gene75417:intron | 30.0% | |
| CTATTATAGGTTGTAGCATT+GGG | + | chr3.3:73444235-73444254 | MS.gene75417:intron | 30.0% | |
| CTTACAAGTTTGTGTTAAGA+AGG | + | chr3.3:73444187-73444206 | MS.gene75417:intron | 30.0% | |
| CTTGTAGAGCAAAATATGTT+AGG | - | chr3.3:73445882-73445901 | None:intergenic | 30.0% | |
| CTTTCCAAAAATGGTTAATC+GGG | + | chr3.3:73445188-73445207 | MS.gene75417:intron | 30.0% | |
| GCAAAAACAGAAAGTAAGAT+CGG | - | chr3.3:73444026-73444045 | None:intergenic | 30.0% | |
| GTGAAGATATTCAAAATGTG+TGG | + | chr3.3:73444263-73444282 | MS.gene75417:intron | 30.0% | |
| TATACGATCATAGTTAGGAA+TGG | + | chr3.3:73444885-73444904 | MS.gene75417:intron | 30.0% | |
| TATCGATGGCTATCTATTAT+AGG | + | chr3.3:73444222-73444241 | MS.gene75417:intron | 30.0% | |
| TATTTACGTTGCCATATACT+TGG | + | chr3.3:73444744-73444763 | MS.gene75417:intron | 30.0% | |
| TCGAACTATACGATTACTTA+AGG | + | chr3.3:73443009-73443028 | MS.gene75417:CDS | 30.0% | |
| TCTATTATAGGTTGTAGCAT+TGG | + | chr3.3:73444234-73444253 | MS.gene75417:intron | 30.0% | |
| TGTAATGAGAAGTTCAACAT+TGG | - | chr3.3:73442591-73442610 | None:intergenic | 30.0% | |
| TTAAGTAATCGTATAGTTCG+AGG | - | chr3.3:73443010-73443029 | None:intergenic | 30.0% | |
| TTATGACTAACAAGATGGAT+TGG | + | chr3.3:73444503-73444522 | MS.gene75417:intron | 30.0% | |
| TTTAGAAAATTTGCATGTGC+AGG | + | chr3.3:73444938-73444957 | MS.gene75417:intron | 30.0% | |
| TTTATGCCAAGAACTAGAAT+GGG | - | chr3.3:73445053-73445072 | None:intergenic | 30.0% | |
| ! | AATATTTGAACCCTTTTTGC+AGG | + | chr3.3:73442181-73442200 | MS.gene75417:intron | 30.0% |
| ! | AATTCCCGATTAACCATTTT+TGG | - | chr3.3:73445195-73445214 | None:intergenic | 30.0% |
| ! | ACGTCTTTTTATCTCCAAAA+CGG | - | chr3.3:73444665-73444684 | None:intergenic | 30.0% |
| ! | AGCCTTATGATATCCAAATA+AGG | - | chr3.3:73444978-73444997 | None:intergenic | 30.0% |
| ! | CAGTGAGCATTTTATAATTC+AGG | + | chr3.3:73442796-73442815 | MS.gene75417:intron | 30.0% |
| ! | GATTTTTGTGTGGAGAAAAA+AGG | + | chr3.3:73445908-73445927 | MS.gene75417:CDS | 30.0% |
| ! | GTGTGTGAATTTAAGGTTAA+GGG | - | chr3.3:73441493-73441512 | None:intergenic | 30.0% |
| ! | TCAAAAGTGGTATTGAATTG+GGG | + | chr3.3:73442435-73442454 | MS.gene75417:intron | 30.0% |
| ! | TGTTGCAAGAGGTTTTTATA+TGG | + | chr3.3:73442266-73442285 | MS.gene75417:intron | 30.0% |
| ! | TTCATTTTATGGCCCATTTA+GGG | + | chr3.3:73444620-73444639 | MS.gene75417:CDS | 30.0% |
| !! | ATACATGAAGGTTAGTCTTA+AGG | + | chr3.3:73441924-73441943 | MS.gene75417:intron | 30.0% |
| !! | TACATACATTGTTAGCTTGT+AGG | + | chr3.3:73442121-73442140 | MS.gene75417:intron | 30.0% |
| !! | TTCAAAGCATCTGGAATTTT+GGG | - | chr3.3:73442866-73442885 | None:intergenic | 30.0% |
| AAACCTGTTGTGAATAAAGG+GGG | - | chr3.3:73445750-73445769 | None:intergenic | 35.0% | |
| AACGTTGGTGTGTGAATTTA+AGG | - | chr3.3:73441500-73441519 | None:intergenic | 35.0% | |
| AATCGTCGGGAATTAAATTG+TGG | + | chr3.3:73443472-73443491 | MS.gene75417:intron | 35.0% | |
| AATTTGAACGCTACGGTTAT+TGG | - | chr3.3:73444380-73444399 | None:intergenic | 35.0% | |
| ACAGAAAGTAAGATCGGAAA+AGG | - | chr3.3:73444020-73444039 | None:intergenic | 35.0% | |
| ACTGCTTTAATCTTAAGGGT+AGG | - | chr3.3:73445651-73445670 | None:intergenic | 35.0% | |
| AGAAGGAGCTGATATTCTAT+TGG | + | chr3.3:73444843-73444862 | MS.gene75417:CDS | 35.0% | |
| AGCAAAGTAATTTGATCGCT+TGG | + | chr3.3:73443988-73444007 | MS.gene75417:intron | 35.0% | |
| AGTAAGATCGGAAAAGGAAA+TGG | - | chr3.3:73444014-73444033 | None:intergenic | 35.0% | |
| ATTATGTTAGTGTCTTGGTG+CGG | - | chr3.3:73443825-73443844 | None:intergenic | 35.0% | |
| CAAAATTCCAGATGCTTTGA+AGG | + | chr3.3:73442865-73442884 | MS.gene75417:CDS | 35.0% | |
| CAAATATAGTGAGATGCTCA+TGG | - | chr3.3:73444425-73444444 | None:intergenic | 35.0% | |
| CAACAGTTGAACAAGGATAT+TGG | - | chr3.3:73443117-73443136 | None:intergenic | 35.0% | |
| CAATAATTTCCAATGCATGC+AGG | - | chr3.3:73444048-73444067 | None:intergenic | 35.0% | |
| CAGAAACCTGTTGTGAATAA+AGG | - | chr3.3:73445753-73445772 | None:intergenic | 35.0% | |
| CTAAAGGAATTTGAACGCTA+CGG | - | chr3.3:73444387-73444406 | None:intergenic | 35.0% | |
| CTGCTTTAATCTTAAGGGTA+GGG | - | chr3.3:73445650-73445669 | None:intergenic | 35.0% | |
| CTTTATTCACAACAGGTTTC+TGG | + | chr3.3:73445751-73445770 | MS.gene75417:intron | 35.0% | |
| GAAAAACCTTGGAACATAGA+AGG | - | chr3.3:73443785-73443804 | None:intergenic | 35.0% | |
| GAAACCTGTTGTGAATAAAG+GGG | - | chr3.3:73445751-73445770 | None:intergenic | 35.0% | |
| GTTCAAATCATGCAAATCCT+AGG | - | chr3.3:73443536-73443555 | None:intergenic | 35.0% | |
| GTTTATGCCAAGAACTAGAA+TGG | - | chr3.3:73445054-73445073 | None:intergenic | 35.0% | |
| TAGACCCATATTCTTCAGAT+GGG | + | chr3.3:73443164-73443183 | MS.gene75417:CDS | 35.0% | |
| TCATGTGAATCTTCCAGTTT+GGG | + | chr3.3:73445245-73445264 | MS.gene75417:intron | 35.0% | |
| TCATGTGTACATCTTCAACT+AGG | + | chr3.3:73443715-73443734 | MS.gene75417:intron | 35.0% | |
| TGAACTATTCTTGAAGGAAG+TGG | + | chr3.3:73443551-73443570 | MS.gene75417:intron | 35.0% | |
| TGATGAAGAAAAGGTGATGA+TGG | + | chr3.3:73445816-73445835 | MS.gene75417:CDS | 35.0% | |
| TGTGTTCACTTACAAGATCA+GGG | - | chr3.3:73443042-73443061 | None:intergenic | 35.0% | |
| TTACCAACACAAGTTCATAC+AGG | - | chr3.3:73443510-73443529 | None:intergenic | 35.0% | |
| TTAGACCCATATTCTTCAGA+TGG | + | chr3.3:73443163-73443182 | MS.gene75417:CDS | 35.0% | |
| ! | AATAGAACCTTCAAAGCATC+TGG | - | chr3.3:73442875-73442894 | None:intergenic | 35.0% |
| ! | CGTCTTTTTATCTCCAAAAC+GGG | - | chr3.3:73444664-73444683 | None:intergenic | 35.0% |
| ! | CTTTTTCTGTAGAGCTTTTG+TGG | + | chr3.3:73442086-73442105 | MS.gene75417:intron | 35.0% |
| ! | GGTGTGTGAATTTAAGGTTA+AGG | - | chr3.3:73441494-73441513 | None:intergenic | 35.0% |
| ! | GTCTTTTTATCTCCAAAACG+GGG | - | chr3.3:73444663-73444682 | None:intergenic | 35.0% |
| ! | GTTCATTTTATGGCCCATTT+AGG | + | chr3.3:73444619-73444638 | MS.gene75417:CDS | 35.0% |
| ! | TAAAGTTGTTTCCTGAAACG+CGG | - | chr3.3:73441874-73441893 | None:intergenic | 35.0% |
| ! | TCACACTTGCCATCAATTTT+TGG | + | chr3.3:73442901-73442920 | MS.gene75417:intron | 35.0% |
| ! | TCTTTTTATCTCCAAAACGG+GGG | - | chr3.3:73444662-73444681 | None:intergenic | 35.0% |
| ! | TTGGACTTTGAAAATGTAGC+AGG | + | chr3.3:73442382-73442401 | MS.gene75417:intron | 35.0% |
| ! | TTTAAGGTTAAGGGTGTGTT+TGG | - | chr3.3:73441484-73441503 | None:intergenic | 35.0% |
| !! | ACATTGCTTGATTGTTTCTG+AGG | + | chr3.3:73442608-73442627 | MS.gene75417:intron | 35.0% |
| !! | CTTCAAAGCATCTGGAATTT+TGG | - | chr3.3:73442867-73442886 | None:intergenic | 35.0% |
| !! | GTTAGTCTTAAGGACATGTT+TGG | + | chr3.3:73441934-73441953 | MS.gene75417:intron | 35.0% |
| !! | TAATTCAGGTTGCAAAAGCA+CGG | + | chr3.3:73442810-73442829 | MS.gene75417:intron | 35.0% |
| !! | TCAAAGCATCTGGAATTTTG+GGG | - | chr3.3:73442865-73442884 | None:intergenic | 35.0% |
| !! | TTTTGTTTCAGCCAATTCAG+AGG | + | chr3.3:73441811-73441830 | MS.gene75417:intron | 35.0% |
| ACCTGAACAACAGTTGAACA+AGG | - | chr3.3:73443124-73443143 | None:intergenic | 40.0% | |
| ACCTGTTGGCAACCAATAAA+CGG | - | chr3.3:73444593-73444612 | None:intergenic | 40.0% | |
| AGAAACCAGCTTGTGCATAA+TGG | - | chr3.3:73444319-73444338 | None:intergenic | 40.0% | |
| AGCAGTTCATATTCCCAAAC+TGG | - | chr3.3:73445261-73445280 | None:intergenic | 40.0% | |
| AGTCCAATGCTTCCCTAAAT+GGG | - | chr3.3:73444635-73444654 | None:intergenic | 40.0% | |
| ATATCCAAATAAGGAAGCCC+AGG | - | chr3.3:73444969-73444988 | None:intergenic | 40.0% | |
| ATGAGGGAAGATGAATCAGA+AGG | + | chr3.3:73444826-73444845 | MS.gene75417:CDS | 40.0% | |
| CAAAAGCTATCAGATGAACC+CGG | + | chr3.3:73444777-73444796 | MS.gene75417:intron | 40.0% | |
| CAACACAAGTTCATACAGGA+AGG | - | chr3.3:73443506-73443525 | None:intergenic | 40.0% | |
| CATGCCCATCTGAAGAATAT+GGG | - | chr3.3:73443171-73443190 | None:intergenic | 40.0% | |
| CATTTCCATTATGCACAAGC+TGG | + | chr3.3:73444311-73444330 | MS.gene75417:intron | 40.0% | |
| CTCATGTGAATCTTCCAGTT+TGG | + | chr3.3:73445244-73445263 | MS.gene75417:intron | 40.0% | |
| CTGACAGTAAAAAGACATGG+AGG | - | chr3.3:73441583-73441602 | None:intergenic | 40.0% | |
| CTGGAACATCATTTAGACAG+TGG | + | chr3.3:73445511-73445530 | MS.gene75417:intron | 40.0% | |
| CTGTGTTCACTTACAAGATC+AGG | - | chr3.3:73443043-73443062 | None:intergenic | 40.0% | |
| CTTCCTGTATGAACTTGTGT+TGG | + | chr3.3:73443504-73443523 | MS.gene75417:intron | 40.0% | |
| GATGAGGCATACAATGAGAA+TGG | + | chr3.3:73442977-73442996 | MS.gene75417:CDS | 40.0% | |
| GCTCTGACAGTAAAAAGACA+TGG | - | chr3.3:73441586-73441605 | None:intergenic | 40.0% | |
| GGAGCTGATATTCTATTGGT+TGG | + | chr3.3:73444847-73444866 | MS.gene75417:intron | 40.0% | |
| GGATCTAGACTTACTATCGA+TGG | + | chr3.3:73444208-73444227 | MS.gene75417:intron | 40.0% | |
| GTTCTCCAATGAGCAAATCA+GGG | - | chr3.3:73444463-73444482 | None:intergenic | 40.0% | |
| TACTCACCTTCTATGTTCCA+AGG | + | chr3.3:73443776-73443795 | MS.gene75417:intron | 40.0% | |
| TATTCTTCAGATGGGCATGA+CGG | + | chr3.3:73443172-73443191 | MS.gene75417:CDS | 40.0% | |
| TCATGCCCATCTGAAGAATA+TGG | - | chr3.3:73443172-73443191 | None:intergenic | 40.0% | |
| TCCAAACTCTTAGACCAGAT+CGG | - | chr3.3:73442544-73442563 | None:intergenic | 40.0% | |
| TCCTTGTTCAACTGTTGTTC+AGG | + | chr3.3:73443120-73443139 | MS.gene75417:intron | 40.0% | |
| TGGCACTCAGTTCAATTTCA+AGG | - | chr3.3:73444696-73444715 | None:intergenic | 40.0% | |
| TGGTGAGTACTCGATGATTA+AGG | + | chr3.3:73445771-73445790 | MS.gene75417:CDS | 40.0% | |
| ! | ACTTGTGTTGGTAAAAGCCT+AGG | + | chr3.3:73443516-73443535 | MS.gene75417:intron | 40.0% |
| ! | AGAGGCTTTGACTGAAATGA+GGG | + | chr3.3:73444810-73444829 | MS.gene75417:CDS | 40.0% |
| ! | AGGTACGCGAGTTCATTTTA+TGG | + | chr3.3:73444609-73444628 | MS.gene75417:intron | 40.0% |
| ! | TAATGCTAGAAGTATGCTGC+TGG | - | chr3.3:73443379-73443398 | None:intergenic | 40.0% |
| ! | TAGGTTGTAGCATTGGGTAT+CGG | + | chr3.3:73444241-73444260 | MS.gene75417:intron | 40.0% |
| ! | TAGTTCTTCAATGGTAGTGC+TGG | - | chr3.3:73441532-73441551 | None:intergenic | 40.0% |
| !! | AATTCAGGTTGCAAAAGCAC+GGG | + | chr3.3:73442811-73442830 | MS.gene75417:intron | 40.0% |
| !! | ATTGTCCCTGATTTGCTCAT+TGG | + | chr3.3:73444455-73444474 | MS.gene75417:intron | 40.0% |
| !! | TGCTGGTTTAAGATCAACGT+TGG | - | chr3.3:73441515-73441534 | None:intergenic | 40.0% |
| AAATGAACTCGCGTACCTGT+TGG | - | chr3.3:73444607-73444626 | None:intergenic | 45.0% | |
| ACCGATCTGGTCTAAGAGTT+TGG | + | chr3.3:73442540-73442559 | MS.gene75417:intron | 45.0% | |
| ACGTTGCCATATACTTGGTC+TGG | + | chr3.3:73444749-73444768 | MS.gene75417:intron | 45.0% | |
| ACTCGATGATTAAGGCTGGT+GGG | + | chr3.3:73445779-73445798 | MS.gene75417:CDS | 45.0% | |
| AGAACCTGGTATGCTGCAAT+TGG | - | chr3.3:73445023-73445042 | None:intergenic | 45.0% | |
| ATGTTCCAGACCTTACAGAC+GGG | - | chr3.3:73445500-73445519 | None:intergenic | 45.0% | |
| ATTGTATGCCTCATCTCCTG+TGG | - | chr3.3:73442972-73442991 | None:intergenic | 45.0% | |
| CAGAAAAAGCCGAGAGCAAA+CGG | - | chr3.3:73442075-73442094 | None:intergenic | 45.0% | |
| GACGGCATTGTTAGAGAAGA+TGG | + | chr3.3:73443190-73443209 | MS.gene75417:CDS | 45.0% | |
| GAGTACTCGATGATTAAGGC+TGG | + | chr3.3:73445775-73445794 | MS.gene75417:CDS | 45.0% | |
| GAGTCCAATGCTTCCCTAAA+TGG | - | chr3.3:73444636-73444655 | None:intergenic | 45.0% | |
| GATGTTCCAGACCTTACAGA+CGG | - | chr3.3:73445501-73445520 | None:intergenic | 45.0% | |
| GCAGCTACAAGATGCACTAA+AGG | - | chr3.3:73444403-73444422 | None:intergenic | 45.0% | |
| GCTGATCTTCTATTACGACG+AGG | - | chr3.3:73441840-73441859 | None:intergenic | 45.0% | |
| GGTTCTCCAATGAGCAAATC+AGG | - | chr3.3:73444464-73444483 | None:intergenic | 45.0% | |
| GTTCAGCCAGACCAAGTATA+TGG | - | chr3.3:73444758-73444777 | None:intergenic | 45.0% | |
| TACTCGATGATTAAGGCTGG+TGG | + | chr3.3:73445778-73445797 | MS.gene75417:CDS | 45.0% | |
| TGACCCCCTTTATTCACAAC+AGG | + | chr3.3:73445744-73445763 | MS.gene75417:intron | 45.0% | |
| TGTTAGGATGATGTCAGCAC+CGG | - | chr3.3:73445866-73445885 | None:intergenic | 45.0% | |
| TTACAGACGGGTAAGGGAAA+AGG | - | chr3.3:73445488-73445507 | None:intergenic | 45.0% | |
| TTCTTGAAGGAAGTGGCAAG+TGG | + | chr3.3:73443558-73443577 | MS.gene75417:intron | 45.0% | |
| TTGTAAACAAGCTGTAGCCC+AGG | + | chr3.3:73443675-73443694 | MS.gene75417:CDS | 45.0% | |
| TTGTATGCCTCATCTCCTGT+GGG | - | chr3.3:73442971-73442990 | None:intergenic | 45.0% | |
| ! | AAAGCCTCTCTGTAGTTTGC+CGG | - | chr3.3:73444799-73444818 | None:intergenic | 45.0% |
| ! | ATTTTATGAAAGGCCCGTGC+TGG | + | chr3.3:73443860-73443879 | MS.gene75417:intron | 45.0% |
| ! | CAAGCTGCGAGATTTTTGTG+TGG | + | chr3.3:73445898-73445917 | MS.gene75417:CDS | 45.0% |
| ! | GAGAGGCTTTGACTGAAATG+AGG | + | chr3.3:73444809-73444828 | MS.gene75417:CDS | 45.0% |
| ! | TTGAACCCTTTTTGCAGGTG+AGG | + | chr3.3:73442186-73442205 | MS.gene75417:intron | 45.0% |
| ! | TTTTCCCTTACCCGTCTGTA+AGG | + | chr3.3:73445487-73445506 | MS.gene75417:intron | 45.0% |
| !! | GATATGATGGATGGTCGTGT+TGG | + | chr3.3:73443905-73443924 | MS.gene75417:CDS | 45.0% |
| !!! | CTGTTTTTGCCTGCATGCAT+TGG | + | chr3.3:73444036-73444055 | MS.gene75417:intron | 45.0% |
| !!! | AAAAAAAAAACATTTTTAAA+GGG | + | chr3.3:73442478-73442497 | MS.gene75417:intron | 5.0% |
| !!! | TAAAAAAAAAACATTTTTAA+AGG | + | chr3.3:73442477-73442496 | MS.gene75417:intron | 5.0% |
| !!! | TTTAAAATAGATTAAATATT+TGG | - | chr3.3:73444716-73444735 | None:intergenic | 5.0% |
| ACGACCATCCATCATATCGC+TGG | - | chr3.3:73443903-73443922 | None:intergenic | 50.0% | |
| ACGCTACGGTTATTGGCGAA+AGG | - | chr3.3:73444373-73444392 | None:intergenic | 50.0% | |
| AGCTTGCATCCGTTTGCTCT+CGG | + | chr3.3:73442063-73442082 | MS.gene75417:intron | 50.0% | |
| ATCCGGGCATAGCACCAATT+GGG | - | chr3.3:73442219-73442238 | None:intergenic | 50.0% | |
| ATCTCCTGTGGGGGTCTAAA+GGG | - | chr3.3:73442960-73442979 | None:intergenic | 50.0% | |
| CACATTACCAGCGACAACAG+CGG | - | chr3.3:73441629-73441648 | None:intergenic | 50.0% | |
| CAGACCTTACAGACGGGTAA+GGG | - | chr3.3:73445494-73445513 | None:intergenic | 50.0% | |
| CAGCATACCAGGTTCTTCTC+TGG | + | chr3.3:73445027-73445046 | MS.gene75417:intron | 50.0% | |
| CGACCATCCATCATATCGCT+GGG | - | chr3.3:73443902-73443921 | None:intergenic | 50.0% | |
| CTCACAAGTGAAGTCACCAC+TGG | - | chr3.3:73441700-73441719 | None:intergenic | 50.0% | |
| CTCGATGATTAAGGCTGGTG+GGG | + | chr3.3:73445780-73445799 | MS.gene75417:CDS | 50.0% | |
| GAAGCCTGGGCTTCCTTATT+TGG | + | chr3.3:73444962-73444981 | MS.gene75417:CDS | 50.0% | |
| GACCATCCATCATATCGCTG+GGG | - | chr3.3:73443901-73443920 | None:intergenic | 50.0% | |
| GGCTTCGAAATCTGCATCAC+TGG | - | chr3.3:73441608-73441627 | None:intergenic | 50.0% | |
| GTCCTCCTCACCTGCAAAAA+GGG | - | chr3.3:73442194-73442213 | None:intergenic | 50.0% | |
| TACACATCGATCCGCGTTTC+AGG | + | chr3.3:73441860-73441879 | MS.gene75417:CDS | 50.0% | |
| TGGTATGCTGCAATTGGCAG+CGG | - | chr3.3:73445017-73445036 | None:intergenic | 50.0% | |
| TGTATGCCTCATCTCCTGTG+GGG | - | chr3.3:73442970-73442989 | None:intergenic | 50.0% | |
| TGTCCTCCTCACCTGCAAAA+AGG | - | chr3.3:73442195-73442214 | None:intergenic | 50.0% | |
| TTACTGTGCCTTAGACGTGC+CGG | + | chr3.3:73445844-73445863 | MS.gene75417:CDS | 50.0% | |
| TTTATATCGAGCTGGGGCAC+AGG | + | chr3.3:73445092-73445111 | MS.gene75417:intron | 50.0% | |
| ! | AACCCTTTTTGCAGGTGAGG+AGG | + | chr3.3:73442189-73442208 | MS.gene75417:intron | 50.0% |
| ! | AAGCCTCTCTGTAGTTTGCC+GGG | - | chr3.3:73444798-73444817 | None:intergenic | 50.0% |
| ! | GCCGTTTATTGGTTGCCAAC+AGG | + | chr3.3:73444589-73444608 | MS.gene75417:intron | 50.0% |
| ! | GTTGCAAAAGCACGGGATGT+TGG | + | chr3.3:73442818-73442837 | MS.gene75417:CDS | 50.0% |
| ! | TACAGGCTTGGTTGGAGACA+CGG | + | chr3.3:73442241-73442260 | MS.gene75417:CDS | 50.0% |
| ! | TGGCCCATTTAGGGAAGCAT+TGG | + | chr3.3:73444629-73444648 | MS.gene75417:CDS | 50.0% |
| ! | TGTTGTCGCTGGTAATGTGC+CGG | + | chr3.3:73441630-73441649 | MS.gene75417:CDS | 50.0% |
| ! | TTGGACTCAAACCCCCGTTT+TGG | + | chr3.3:73444648-73444667 | MS.gene75417:CDS | 50.0% |
| !! | CTCTGGCCCATTCTAGTTCT+TGG | + | chr3.3:73445044-73445063 | MS.gene75417:intron | 50.0% |
| CAACCAAGCCTGTAGCATCC+GGG | - | chr3.3:73442235-73442254 | None:intergenic | 55.0% | |
| CATCCGGGCATAGCACCAAT+TGG | - | chr3.3:73442220-73442239 | None:intergenic | 55.0% | |
| CATCTCCTGTGGGGGTCTAA+AGG | - | chr3.3:73442961-73442980 | None:intergenic | 55.0% | |
| CCAACCAAGCCTGTAGCATC+CGG | - | chr3.3:73442236-73442255 | None:intergenic | 55.0% | |
| CCAGACCTTACAGACGGGTA+AGG | - | chr3.3:73445495-73445514 | None:intergenic | 55.0% | |
| CCTTACCCGTCTGTAAGGTC+TGG | + | chr3.3:73445492-73445511 | MS.gene75417:intron | 55.0% | |
| GAACCCGGCAAACTACAGAG+AGG | + | chr3.3:73444792-73444811 | MS.gene75417:CDS | 55.0% | |
| GAATGGGCCAGAGAAGAACC+TGG | - | chr3.3:73445037-73445056 | None:intergenic | 55.0% | |
| GCTGCCAATTGCAGCATACC+AGG | + | chr3.3:73445016-73445035 | MS.gene75417:CDS | 55.0% | |
| GTATGCCTCATCTCCTGTGG+GGG | - | chr3.3:73442969-73442988 | None:intergenic | 55.0% | |
| TCCGGGCATAGCACCAATTG+GGG | - | chr3.3:73442218-73442237 | None:intergenic | 55.0% | |
| TCTCCTGTGGGGGTCTAAAG+GGG | - | chr3.3:73442959-73442978 | None:intergenic | 55.0% | |
| TGACCACATCTGCTCCAGCA+CGG | - | chr3.3:73443877-73443896 | None:intergenic | 55.0% | |
| TGCATGTGCAGGTGAAGCCT+GGG | + | chr3.3:73444949-73444968 | MS.gene75417:intron | 55.0% | |
| TTAGACCCCCACAGGAGATG+AGG | + | chr3.3:73442961-73442980 | MS.gene75417:intron | 55.0% | |
| TTGCATGTGCAGGTGAAGCC+TGG | + | chr3.3:73444948-73444967 | MS.gene75417:intron | 55.0% | |
| ! | AGCCCCAGCGATATGATGGA+TGG | + | chr3.3:73443896-73443915 | MS.gene75417:CDS | 55.0% |
| ! | GAGACACGGACTGTTGCAAG+AGG | + | chr3.3:73442255-73442274 | MS.gene75417:CDS | 55.0% |
| ! | GAGCTGGGGCACAGGTTTTA+TGG | + | chr3.3:73445100-73445119 | MS.gene75417:intron | 55.0% |
| ! | GGGTAGGGTGTCAAGCATCA+TGG | - | chr3.3:73445635-73445654 | None:intergenic | 55.0% |
| !! | ACCCCAATTGGTGCTATGCC+CGG | + | chr3.3:73442214-73442233 | MS.gene75417:CDS | 55.0% |
| ATGCCCGGATGCTACAGGCT+TGG | + | chr3.3:73442229-73442248 | MS.gene75417:CDS | 60.0% | |
| CGACGAGGACGCCTCTGAAT+TGG | - | chr3.3:73441825-73441844 | None:intergenic | 60.0% | |
| CGAGCAGCTCTCGATGCTGA+AGG | + | chr3.3:73443935-73443954 | MS.gene75417:CDS | 60.0% | |
| CTCCTGTGGGGGTCTAAAGG+GGG | - | chr3.3:73442958-73442977 | None:intergenic | 60.0% | |
| GACCACATCTGCTCCAGCAC+GGG | - | chr3.3:73443876-73443895 | None:intergenic | 60.0% | |
| GGTCAGCCCCAGCGATATGA+TGG | + | chr3.3:73443892-73443911 | MS.gene75417:CDS | 60.0% | |
| GGTGAGGAGGACACCCCAAT+TGG | + | chr3.3:73442202-73442221 | MS.gene75417:intron | 60.0% | |
| GTGCTATGCCCGGATGCTAC+AGG | + | chr3.3:73442224-73442243 | MS.gene75417:CDS | 60.0% | |
| TTCCCCCTTTAGACCCCCAC+AGG | + | chr3.3:73442953-73442972 | MS.gene75417:intron | 60.0% | |
| TTCGAAGCCGCTGTTGTCGC+TGG | + | chr3.3:73441619-73441638 | MS.gene75417:CDS | 60.0% | |
| ! | CCGGATGCTACAGGCTTGGT+TGG | + | chr3.3:73442233-73442252 | MS.gene75417:CDS | 60.0% |
| !! | TGTCAGCACCGGCACGTCTA+AGG | - | chr3.3:73445855-73445874 | None:intergenic | 60.0% |
| GCCTCCTGTACCGCCTACAC+CGG | + | chr3.3:73441657-73441676 | MS.gene75417:CDS | 65.0% | |
| GTCACCACTGGCGTTCCAGC+AGG | - | chr3.3:73441688-73441707 | None:intergenic | 65.0% | |
| TGCACCTGCTGGAACGCCAG+TGG | + | chr3.3:73441681-73441700 | MS.gene75417:CDS | 65.0% | |
| CCAGCAGGTGCAGCCGGTGT+AGG | - | chr3.3:73441673-73441692 | None:intergenic | 70.0% | |
| GCAGCCGGTGTAGGCGGTAC+AGG | - | chr3.3:73441664-73441683 | None:intergenic | 70.0% | |
| GCAGGTGCAGCCGGTGTAGG+CGG | - | chr3.3:73441670-73441689 | None:intergenic | 70.0% | |
| GCCGGTGTAGGCGGTACAGG+AGG | - | chr3.3:73441661-73441680 | None:intergenic | 70.0% | |
| GGCCCGTGCTGGAGCAGATG+TGG | + | chr3.3:73443871-73443890 | MS.gene75417:intron | 70.0% | |
| GGCGTTCCAGCAGGTGCAGC+CGG | - | chr3.3:73441679-73441698 | None:intergenic | 70.0% | |
| ! | CCTACACCGGCTGCACCTGC+TGG | + | chr3.3:73441670-73441689 | MS.gene75417:CDS | 70.0% |
| ! | GGCGGTACAGGAGGCGCATC+CGG | - | chr3.3:73441652-73441671 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73441460 | 73445933 | 73441460 | ID=MS.gene75417 |
| chr3.3 | mRNA | 73441460 | 73445933 | 73441460 | ID=MS.gene75417.t1;Parent=MS.gene75417 |
| chr3.3 | exon | 73441460 | 73441702 | 73441460 | ID=MS.gene75417.t1.exon1;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73441460 | 73441702 | 73441460 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73441831 | 73441933 | 73441831 | ID=MS.gene75417.t1.exon2;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73441831 | 73441933 | 73441831 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73442203 | 73442276 | 73442203 | ID=MS.gene75417.t1.exon3;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73442203 | 73442276 | 73442203 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73442818 | 73442886 | 73442818 | ID=MS.gene75417.t1.exon4;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73442818 | 73442886 | 73442818 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73442965 | 73443048 | 73442965 | ID=MS.gene75417.t1.exon5;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73442965 | 73443048 | 73442965 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73443142 | 73443211 | 73443142 | ID=MS.gene75417.t1.exon6;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73443142 | 73443211 | 73443142 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73443641 | 73443696 | 73443641 | ID=MS.gene75417.t1.exon7;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73443641 | 73443696 | 73443641 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73443872 | 73443993 | 73443872 | ID=MS.gene75417.t1.exon8;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73443872 | 73443993 | 73443872 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73444611 | 73444682 | 73444611 | ID=MS.gene75417.t1.exon9;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73444611 | 73444682 | 73444611 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73444783 | 73444864 | 73444783 | ID=MS.gene75417.t1.exon10;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73444783 | 73444864 | 73444783 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73444960 | 73445037 | 73444960 | ID=MS.gene75417.t1.exon11;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73444960 | 73445037 | 73444960 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| chr3.3 | exon | 73445766 | 73445933 | 73445766 | ID=MS.gene75417.t1.exon12;Parent=MS.gene75417.t1 |
| chr3.3 | CDS | 73445766 | 73445933 | 73445766 | ID=cds.MS.gene75417.t1;Parent=MS.gene75417.t1 |
| Gene Sequence |
| Protein sequence |
