Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75907.t1 | XP_013463768.1 | 97.7 | 1001 | 23 | 0 | 1 | 1001 | 1 | 1001 | 0.00E+00 | 1831.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75907.t1 | F4JT76 | 62.7 | 989 | 330 | 9 | 45 | 999 | 46 | 1029 | 0.0e+00 | 1116.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75907.t1 | A0A072V8X8 | 97.7 | 1001 | 23 | 0 | 1 | 1001 | 1 | 1001 | 0.0e+00 | 1831.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050213 | MS.gene75907 | 0.801294 | 9.64E-49 | -1.69E-46 |
MS.gene050257 | MS.gene75907 | 0.818054 | 2.39E-52 | -1.69E-46 |
MS.gene050817 | MS.gene75907 | 0.805982 | 1.03E-49 | -1.69E-46 |
MS.gene051834 | MS.gene75907 | 0.801148 | 1.03E-48 | -1.69E-46 |
MS.gene052609 | MS.gene75907 | 0.820054 | 8.40E-53 | -1.69E-46 |
MS.gene053143 | MS.gene75907 | 0.808268 | 3.37E-50 | -1.69E-46 |
MS.gene053486 | MS.gene75907 | 0.804979 | 1.67E-49 | -1.69E-46 |
MS.gene054585 | MS.gene75907 | 0.836118 | 1.13E-56 | -1.69E-46 |
MS.gene054824 | MS.gene75907 | 0.806177 | 9.34E-50 | -1.69E-46 |
MS.gene056431 | MS.gene75907 | 0.814395 | 1.57E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75907.t1 | MTR_2g047908 | 97.902 | 1001 | 21 | 0 | 1 | 1001 | 1 | 1001 | 0.0 | 2013 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75907.t1 | AT4G19490 | 62.959 | 980 | 324 | 10 | 50 | 995 | 51 | 1025 | 0.0 | 1170 |
MS.gene75907.t1 | AT4G19490 | 62.959 | 980 | 324 | 10 | 50 | 995 | 51 | 1025 | 0.0 | 1170 |
Find 226 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATTGGATGCATTGTCTTC+TGG | 0.094351 | 2.1:+43492831 | MS.gene75907:CDS |
TGGAAGATGGGCAAAGCTTC+TGG | 0.196408 | 2.1:+43492369 | MS.gene75907:CDS |
GATTTACTATGACCTCTATT+TGG | 0.232799 | 2.1:-43492999 | None:intergenic |
AGTCTTCTCCCTACTGTAAT+TGG | 0.243607 | 2.1:+43484679 | MS.gene75907:CDS |
TAGTATGTATTTCATCTCTA+TGG | 0.256270 | 2.1:-43497948 | None:intergenic |
CATTGGATGCATTGTCTTCT+GGG | 0.257495 | 2.1:+43492832 | MS.gene75907:CDS |
TTGGATTGTTGAAGAGTCTT+TGG | 0.260294 | 2.1:-43478309 | None:intergenic |
TTATCTTCTTCAACACCATT+AGG | 0.265383 | 2.1:-43492858 | None:intergenic |
AACCATGAACCTCACTTTCT+TGG | 0.273465 | 2.1:-43491135 | None:intergenic |
GGAGGAGATAGGGGTGAATT+CGG | 0.274597 | 2.1:-43478384 | None:intergenic |
GAATTCTTGGTGCAAAGATT+TGG | 0.283857 | 2.1:+43499722 | MS.gene75907:CDS |
TGAGGATTGAGGAGAGAGAT+TGG | 0.289732 | 2.1:-43478328 | None:intergenic |
GGTGAGTTGCAGGATCTTAA+TGG | 0.294745 | 2.1:+43478764 | MS.gene75907:CDS |
TTCAAACAGTTACCATGATT+TGG | 0.296801 | 2.1:+43492881 | MS.gene75907:CDS |
GTGGATTTGGTGGAGGAGAT+AGG | 0.304954 | 2.1:-43478395 | None:intergenic |
TCCATCTTGCTAGGTTATAT+CGG | 0.328965 | 2.1:+43499612 | MS.gene75907:intron |
CTGAACATCATCTTCATTCA+AGG | 0.330488 | 2.1:-43498905 | None:intergenic |
AATTCTTGGTGCAAAGATTT+GGG | 0.338077 | 2.1:+43499723 | MS.gene75907:CDS |
GAAAGGATTGTTGAGGATTG+AGG | 0.340912 | 2.1:-43478339 | None:intergenic |
GAGAAGACTATCTTTGAAAT+TGG | 0.341489 | 2.1:-43484665 | None:intergenic |
AGATGAAATACATACTAAAT+TGG | 0.341577 | 2.1:+43497954 | MS.gene75907:CDS |
CCCAATGATTTACCTTTGTA+AGG | 0.344082 | 2.1:-43498089 | None:intergenic |
GGTGAGAGTGGAGGTGGATT+TGG | 0.344556 | 2.1:-43478408 | None:intergenic |
AGCACTCTCTGCTCTCAAAT+TGG | 0.345395 | 2.1:+43478952 | MS.gene75907:CDS |
GTAAATCTGATACCCCTAAC+TGG | 0.347894 | 2.1:+43499687 | MS.gene75907:CDS |
GAGGAGATAGGGGTGAATTC+GGG | 0.352076 | 2.1:-43478383 | None:intergenic |
TTCATACATGCTATTATTCC+TGG | 0.352633 | 2.1:+43494932 | MS.gene75907:CDS |
AGGCAGATTCAGTTGCTTAA+TGG | 0.363866 | 2.1:+43478869 | MS.gene75907:CDS |
TGCCAGCGCCAGGTGTTTAG+AGG | 0.373233 | 2.1:-43494894 | None:intergenic |
AAAATCTTGTTTGAAGTAAA+GGG | 0.374771 | 2.1:-43478582 | None:intergenic |
TGATGATTTGCAACATTTGC+TGG | 0.374859 | 2.1:+43479707 | MS.gene75907:CDS |
CATTTCTGGTGTAAGAAATT+CGG | 0.375373 | 2.1:+43495059 | MS.gene75907:intron |
TATCTTCTTCAACACCATTA+GGG | 0.375458 | 2.1:-43492857 | None:intergenic |
GAAGCTCGAGCAGCAATAAC+TGG | 0.375937 | 2.1:-43485903 | None:intergenic |
CTAACAGATTGGTGGAAGAT+TGG | 0.380927 | 2.1:+43492561 | MS.gene75907:intron |
TTGTCTTCTGGGGACCCTAA+TGG | 0.382958 | 2.1:+43492843 | MS.gene75907:CDS |
TTGGTTATCACATGGTAAAC+TGG | 0.383025 | 2.1:+43493090 | MS.gene75907:CDS |
TTAATTTGATGCTAGGAAGT+TGG | 0.384309 | 2.1:+43498856 | MS.gene75907:intron |
CTTGAATGAAGATGATGTTC+AGG | 0.384831 | 2.1:+43498906 | MS.gene75907:CDS |
TCATCCAGCTGACCCCAGTT+AGG | 0.386772 | 2.1:-43499701 | None:intergenic |
GGGTCAGCTGGATGAATTCT+TGG | 0.389869 | 2.1:+43499709 | MS.gene75907:CDS |
TCCTTGAAAAGATGGACCCT+TGG | 0.391285 | 2.1:-43491194 | None:intergenic |
ACCATGAACCTCACTTTCTT+GGG | 0.397257 | 2.1:-43491134 | None:intergenic |
TCTCGTTGTTAGCGTGTTTG+CGG | 0.400868 | 2.1:-43478493 | None:intergenic |
TGATGTGGTTGAACTTCATC+TGG | 0.402700 | 2.1:+43478697 | MS.gene75907:CDS |
TTCCAACTCTCAACAATTTG+AGG | 0.403722 | 2.1:-43498021 | None:intergenic |
GGAAGATGGGCAAAGCTTCT+GGG | 0.404008 | 2.1:+43492370 | MS.gene75907:CDS |
TGAAGCGCAGGGTGAGTTGC+AGG | 0.405088 | 2.1:+43478754 | MS.gene75907:CDS |
TAGGCTTATTGATTCCGATT+TGG | 0.406044 | 2.1:+43478835 | MS.gene75907:CDS |
AAACATGTGAACTTGTGCTT+GGG | 0.406106 | 2.1:+43493725 | MS.gene75907:CDS |
GTTGCATCTGCAGATTGTGC+TGG | 0.409563 | 2.1:+43479669 | MS.gene75907:CDS |
AATTATTGCAGTGCTTGAAC+AGG | 0.410323 | 2.1:+43492749 | MS.gene75907:CDS |
TGGATTTGGTGGAGGAGATA+GGG | 0.415628 | 2.1:-43478394 | None:intergenic |
GAAAATCTTGTTTGAAGTAA+AGG | 0.417029 | 2.1:-43478583 | None:intergenic |
TAACAGATTGGTGGAAGATT+GGG | 0.423692 | 2.1:+43492562 | MS.gene75907:intron |
TTGATTGTCAGCATGATTCT+CGG | 0.424026 | 2.1:+43492629 | MS.gene75907:CDS |
TGCAGATTGTGCTGGAGCAC+TGG | 0.426005 | 2.1:+43479677 | MS.gene75907:CDS |
GAAGAGTCTTTGGAGAAAGA+TGG | 0.434679 | 2.1:-43478299 | None:intergenic |
TACCCCTAACTGGGGTCAGC+TGG | 0.437194 | 2.1:+43499697 | MS.gene75907:CDS |
GGTTGAACTTCATCTGGTTA+AGG | 0.438247 | 2.1:+43478703 | MS.gene75907:CDS |
CCAACACCTTTGTAGTAAAG+AGG | 0.440474 | 2.1:-43493071 | None:intergenic |
CATCCAGCTGACCCCAGTTA+GGG | 0.444365 | 2.1:-43499700 | None:intergenic |
GTCGTCGTTCTTTGAAGCGC+AGG | 0.445581 | 2.1:+43478742 | MS.gene75907:CDS |
TTTGAGGCAACCCACGCAAA+TGG | 0.448126 | 2.1:-43498005 | None:intergenic |
TGGAGGTTGTGCGGTTGAGA+TGG | 0.449751 | 2.1:-43478256 | None:intergenic |
TTTGGAGAAAGATGGAGAAG+AGG | 0.449937 | 2.1:-43478291 | None:intergenic |
GGAGGTTGTGCGGTTGAGAT+GGG | 0.452498 | 2.1:-43478255 | None:intergenic |
GAAAGATGGAGAAGAGGTTG+AGG | 0.452974 | 2.1:-43478285 | None:intergenic |
GTGAGTTGCAGGATCTTAAT+GGG | 0.454099 | 2.1:+43478765 | MS.gene75907:CDS |
CCCCACGACGGTTGCTGAGA+AGG | 0.455534 | 2.1:-43478209 | None:intergenic |
CGCCAGGTGTTTAGAGGTGA+TGG | 0.456248 | 2.1:-43494888 | None:intergenic |
ATAATGGATTGAAATTCATC+AGG | 0.457894 | 2.1:-43492795 | None:intergenic |
TGCCTCAAATTGTTGAGAGT+TGG | 0.458502 | 2.1:+43498019 | MS.gene75907:CDS |
GAGAGTGGAGGTGGATTTGG+TGG | 0.459358 | 2.1:-43478405 | None:intergenic |
GTTGCTCAAAATCCATTCAA+TGG | 0.459861 | 2.1:-43491041 | None:intergenic |
GAGATTGTGGTGGAAGAGAA+AGG | 0.460106 | 2.1:-43478356 | None:intergenic |
ATTTGGTTTCTTAGATTCAT+CGG | 0.461938 | 2.1:-43492982 | None:intergenic |
TGAAAATAGCACTCAAAAGA+TGG | 0.462719 | 2.1:-43487564 | None:intergenic |
ACCGAGCAAATTGACTAGGC+TGG | 0.463020 | 2.1:-43498065 | None:intergenic |
ACACGCGACGAGTGCTTCTC+CGG | 0.464490 | 2.1:-43478543 | None:intergenic |
CTGTAGCTGTAATGAACTCA+TGG | 0.467812 | 2.1:-43492456 | None:intergenic |
GTGAATTGAAGGATACGGTT+AGG | 0.471624 | 2.1:+43478816 | MS.gene75907:CDS |
CCTCGCAGACTCAACCAAAT+CGG | 0.473104 | 2.1:-43478849 | None:intergenic |
ACCTTCTCAGCAACCGTCGT+GGG | 0.474218 | 2.1:+43478208 | MS.gene75907:CDS |
GTTGAGATGGGTGGTGGAGA+AGG | 0.474278 | 2.1:-43478243 | None:intergenic |
ATCTCCGACGACGGCGGTGC+CGG | 0.474716 | 2.1:+43478524 | MS.gene75907:CDS |
CCGAGCAAATTGACTAGGCT+GGG | 0.475033 | 2.1:-43498064 | None:intergenic |
TGATTGTCAGCATGATTCTC+GGG | 0.478005 | 2.1:+43492630 | MS.gene75907:CDS |
TGACTTGACTTGCCAGCGCC+AGG | 0.481429 | 2.1:-43494904 | None:intergenic |
GATAGGGGTGAATTCGGGAG+AGG | 0.482041 | 2.1:-43478378 | None:intergenic |
TCCCAAGAAAGTGAGGTTCA+TGG | 0.483565 | 2.1:+43491133 | MS.gene75907:CDS |
TTCGAGGATTCGTGAATTGA+AGG | 0.485297 | 2.1:+43478805 | MS.gene75907:CDS |
GCTTTATAGAATCCATAAAC+AGG | 0.486410 | 2.1:+43480488 | MS.gene75907:CDS |
GCACTTCACAAGCACAGAAT+AGG | 0.487743 | 2.1:+43499525 | MS.gene75907:CDS |
AGAGAGATAAGGAAGGAAAT+CGG | 0.490199 | 2.1:-43478435 | None:intergenic |
GGCTGGGGATCAGCATCCTC+AGG | 0.491091 | 2.1:-43498048 | None:intergenic |
CCATCTTGCTAGGTTATATC+GGG | 0.497975 | 2.1:+43499613 | MS.gene75907:intron |
AGAAGAGGTTGAGGAAGATG+TGG | 0.500128 | 2.1:-43478276 | None:intergenic |
TGCATACGGTCATTGCCATC+GGG | 0.501049 | 2.1:+43499656 | MS.gene75907:CDS |
CCATCCTAGGTTGAAACTGC+AGG | 0.501496 | 2.1:+43492408 | MS.gene75907:CDS |
TGGTACAAGGACGAATTTGT+TGG | 0.502601 | 2.1:+43478889 | MS.gene75907:CDS |
TGTGCGGTTGAGATGGGTGG+TGG | 0.503482 | 2.1:-43478249 | None:intergenic |
TGCTGCTCGAGCTTCAGAAT+CGG | 0.505667 | 2.1:+43485911 | MS.gene75907:CDS |
TGGCGCTTCAGCAGAAACTT+AGG | 0.506431 | 2.1:+43478909 | MS.gene75907:CDS |
TTCTCCGGCACCGCCGTCGT+CGG | 0.507390 | 2.1:-43478528 | None:intergenic |
GACTGTCCAGTGTCTGCCAT+CGG | 0.509078 | 2.1:-43492924 | None:intergenic |
ATAAGGAAGGAAATCGGATC+GGG | 0.511146 | 2.1:-43478429 | None:intergenic |
CTGAAGATAGTGCTGGCAAA+AGG | 0.511487 | 2.1:-43493657 | None:intergenic |
CTGACAATCAATAAAAGCCT+TGG | 0.511746 | 2.1:-43492617 | None:intergenic |
ATGCATACGGTCATTGCCAT+CGG | 0.513725 | 2.1:+43499655 | MS.gene75907:CDS |
GGATTTGGTGGAGGAGATAG+GGG | 0.513847 | 2.1:-43478393 | None:intergenic |
TTCTGGAGACAGAGCTGTAG+AGG | 0.513880 | 2.1:+43485941 | MS.gene75907:CDS |
AGATGGGTGGTGGAGAAGGT+TGG | 0.514914 | 2.1:-43478239 | None:intergenic |
CATCTTAGAGATAATGTGAC+AGG | 0.518469 | 2.1:+43480466 | MS.gene75907:CDS |
AGAGATTGATCGAGTTGCAC+AGG | 0.520465 | 2.1:+43495132 | MS.gene75907:CDS |
GCGGTGGAAGGGATCGGAGA+TGG | 0.522311 | 2.1:-43478459 | None:intergenic |
TTCAGTTGCTTAATGGTACA+AGG | 0.523416 | 2.1:+43478876 | MS.gene75907:CDS |
AAAACATGTGAACTTGTGCT+TGG | 0.523529 | 2.1:+43493724 | MS.gene75907:CDS |
GTGATGCTGCTCATGGAAGA+TGG | 0.523630 | 2.1:+43492356 | MS.gene75907:CDS |
TTCTCAGCAAAAGTCGAAAA+CGG | 0.523706 | 2.1:-43478641 | None:intergenic |
AACATATTCTTCAATGCATA+CGG | 0.524683 | 2.1:+43499642 | MS.gene75907:CDS |
AGTGGAGGTGGATTTGGTGG+AGG | 0.527638 | 2.1:-43478402 | None:intergenic |
TCGGAGATGGAAGAGAGATA+AGG | 0.528602 | 2.1:-43478446 | None:intergenic |
GTCGAAGCGGTGGAAGGGAT+CGG | 0.531095 | 2.1:-43478465 | None:intergenic |
GCCAGCACTATCTTCAGAAG+TGG | 0.531197 | 2.1:+43493663 | MS.gene75907:CDS |
CACGACGGTTGCTGAGAAGG+TGG | 0.531198 | 2.1:-43478206 | None:intergenic |
AGAGGTTGAGGAAGATGTGG+AGG | 0.531571 | 2.1:-43478273 | None:intergenic |
CCTCTTTACTACAAAGGTGT+TGG | 0.532019 | 2.1:+43493071 | MS.gene75907:CDS |
CACCTCTAAACACCTGGCGC+TGG | 0.532318 | 2.1:+43494892 | MS.gene75907:CDS |
GAATTCGGGAGAGGAGATTG+TGG | 0.533724 | 2.1:-43478369 | None:intergenic |
GCTCGGCCGATGGCAGACAC+TGG | 0.534162 | 2.1:+43492918 | MS.gene75907:CDS |
CCTGCAGTTTCAACCTAGGA+TGG | 0.534902 | 2.1:-43492408 | None:intergenic |
CTAAGCAAGCCAATTACAGT+AGG | 0.534956 | 2.1:-43484688 | None:intergenic |
CAGTGTTAGTCACCAAATCA+TGG | 0.536101 | 2.1:-43492893 | None:intergenic |
GAATCTAAGAAACCAAATAG+AGG | 0.536720 | 2.1:+43492987 | MS.gene75907:CDS |
GAAGATGGGCAAAGCTTCTG+GGG | 0.543719 | 2.1:+43492371 | MS.gene75907:CDS |
GGATCGGGTGAGAGTGGAGG+TGG | 0.545880 | 2.1:-43478414 | None:intergenic |
CCAATGATTTACCTTTGTAA+GGG | 0.546540 | 2.1:-43498088 | None:intergenic |
GGTTGTGCGGTTGAGATGGG+TGG | 0.547848 | 2.1:-43478252 | None:intergenic |
CCCAGCCTAGTCAATTTGCT+CGG | 0.551514 | 2.1:+43498064 | MS.gene75907:CDS |
CGACGGTTGCTGAGAAGGTG+GGG | 0.554921 | 2.1:-43478204 | None:intergenic |
ACCTCAAAAGAATGTTGCCA+AGG | 0.555014 | 2.1:+43491177 | MS.gene75907:CDS |
ACGACGGTTGCTGAGAAGGT+GGG | 0.556045 | 2.1:-43478205 | None:intergenic |
ATTGCAGGCACATTTAGTGC+GGG | 0.556696 | 2.1:+43491000 | MS.gene75907:intron |
TAAATCTGATACCCCTAACT+GGG | 0.558306 | 2.1:+43499688 | MS.gene75907:CDS |
CAGTGCTTGAACAGGAAACA+TGG | 0.560977 | 2.1:+43492757 | MS.gene75907:CDS |
TCGTCGTTCTTTGAAGCGCA+GGG | 0.562342 | 2.1:+43478743 | MS.gene75907:CDS |
GCTTGGGGCTAAAGCAATGC+AGG | 0.562696 | 2.1:+43493741 | MS.gene75907:CDS |
TCCGTGCTACTCTCCATCCT+AGG | 0.564248 | 2.1:+43492395 | MS.gene75907:CDS |
CCAGAAGACAATGCATCCAA+TGG | 0.565992 | 2.1:-43492831 | None:intergenic |
ATTGGATGCATTGTCTTCTG+GGG | 0.566027 | 2.1:+43492833 | MS.gene75907:CDS |
GTTGCTGCAGCAATTGCGCA+TGG | 0.566203 | 2.1:+43491091 | MS.gene75907:CDS |
GAAATCGGATCGGGTGAGAG+TGG | 0.566399 | 2.1:-43478420 | None:intergenic |
AATTAAAACTAACAGATTGG+TGG | 0.567362 | 2.1:+43492553 | MS.gene75907:intron |
CACCTTCTCAGCAACCGTCG+TGG | 0.569490 | 2.1:+43478207 | MS.gene75907:CDS |
GCAGCATGTGATGCTGCTCA+TGG | 0.572022 | 2.1:+43492349 | MS.gene75907:CDS |
GATTTCGTCGAAGCGGTGGA+AGG | 0.572538 | 2.1:-43478471 | None:intergenic |
CCGTGGGATACTGCATTCAC+AGG | 0.573028 | 2.1:+43492594 | MS.gene75907:CDS |
TAACACTGATGCTCGGCCGA+TGG | 0.574539 | 2.1:+43492908 | MS.gene75907:CDS |
GTCCATCACCTCTAAACACC+TGG | 0.580720 | 2.1:+43494886 | MS.gene75907:CDS |
TAGGATGGAGACGAGCTCAC+TGG | 0.580944 | 2.1:+43480427 | MS.gene75907:intron |
CGATAGATCCTCAGAACAGA+GGG | 0.581171 | 2.1:-43485822 | None:intergenic |
TGCGGATTTCGTCGAAGCGG+TGG | 0.583150 | 2.1:-43478475 | None:intergenic |
GCAGGCACATTTAGTGCGGG+CGG | 0.584583 | 2.1:+43491003 | MS.gene75907:intron |
AGATGGAAGAGAGATAAGGA+AGG | 0.585671 | 2.1:-43478442 | None:intergenic |
GATTCGTGAATTGAAGGATA+CGG | 0.585784 | 2.1:+43478811 | MS.gene75907:CDS |
ACCACTTCTGAAGATAGTGC+TGG | 0.586489 | 2.1:-43493664 | None:intergenic |
GACAGAGCTGTAGAGGCAGA+TGG | 0.588172 | 2.1:+43485948 | MS.gene75907:CDS |
CTAAACTTCCCTCTGTTCTG+AGG | 0.589450 | 2.1:+43485814 | MS.gene75907:CDS |
GATAAGGAAGGAAATCGGAT+CGG | 0.590702 | 2.1:-43478430 | None:intergenic |
ATTTCGTCGAAGCGGTGGAA+GGG | 0.591536 | 2.1:-43478470 | None:intergenic |
TGATGCTGCTCATGGAAGAT+GGG | 0.595132 | 2.1:+43492357 | MS.gene75907:CDS |
GATTATTAGTCCATTTGCGT+GGG | 0.595362 | 2.1:+43497995 | MS.gene75907:CDS |
AGAGCTTCCCTGCTGATGAA+CGG | 0.596084 | 2.1:+43482617 | MS.gene75907:CDS |
AGATTATTAGTCCATTTGCG+TGG | 0.598580 | 2.1:+43497994 | MS.gene75907:CDS |
TTCGGGAGAGGAGATTGTGG+TGG | 0.598720 | 2.1:-43478366 | None:intergenic |
ATTTGCTCGGTCCCTTACAA+AGG | 0.602170 | 2.1:+43498077 | MS.gene75907:CDS |
AGATTGGGATACAGCATCCG+TGG | 0.603988 | 2.1:+43492577 | MS.gene75907:CDS |
TCACATTATCTCTAAGATGA+CGG | 0.605689 | 2.1:-43480462 | None:intergenic |
AGGAAGATGTGGAGGTTGTG+CGG | 0.607105 | 2.1:-43478265 | None:intergenic |
AGATCGTGGAAGGATGTTCG+AGG | 0.608490 | 2.1:+43478789 | MS.gene75907:CDS |
GATACTGCATTCACAGGCCA+AGG | 0.608690 | 2.1:+43492600 | MS.gene75907:CDS |
TGGTGACTAACACTGATGCT+CGG | 0.608970 | 2.1:+43492901 | MS.gene75907:CDS |
AACTGGAAGCAACTCAGCAA+CGG | 0.610286 | 2.1:-43485886 | None:intergenic |
GATTGCAGGCACATTTAGTG+CGG | 0.612804 | 2.1:+43490999 | MS.gene75907:intron |
GCTTTCGCAGTATCTTGATG+TGG | 0.613686 | 2.1:+43478682 | MS.gene75907:CDS |
TGGAAGAGAAAGGATTGTTG+AGG | 0.613752 | 2.1:-43478346 | None:intergenic |
CCTTCTCAGCAACCGTCGTG+GGG | 0.614767 | 2.1:+43478209 | MS.gene75907:CDS |
AACTCCTGCAGTTTCAACCT+AGG | 0.615419 | 2.1:-43492412 | None:intergenic |
AGAAATATCCCAAGAAAGTG+AGG | 0.616680 | 2.1:+43491126 | MS.gene75907:CDS |
ATCGGATCGGGTGAGAGTGG+AGG | 0.617240 | 2.1:-43478417 | None:intergenic |
CGAGCAAATTGACTAGGCTG+GGG | 0.619970 | 2.1:-43498063 | None:intergenic |
CAAAGGTGTTGGTTATCACA+TGG | 0.620579 | 2.1:+43493082 | MS.gene75907:CDS |
AGTAAAGGGACGGAACTTCA+CGG | 0.620921 | 2.1:-43478568 | None:intergenic |
TCTTGTTTGAAGTAAAGGGA+CGG | 0.624946 | 2.1:-43478578 | None:intergenic |
CCTCAAAAGAATGTTGCCAA+GGG | 0.627962 | 2.1:+43491178 | MS.gene75907:CDS |
CTTAATGGGAAGATCGTGGA+AGG | 0.629428 | 2.1:+43478779 | MS.gene75907:CDS |
TCTCAACCTCTTTACTACAA+AGG | 0.632100 | 2.1:+43493065 | MS.gene75907:CDS |
AGGGACCGAGCAAATTGACT+AGG | 0.632270 | 2.1:-43498069 | None:intergenic |
GATTTACTTAAATCACCCGA+TGG | 0.633116 | 2.1:-43499671 | None:intergenic |
TTCAGAAGTGGTTCACCGTG+TGG | 0.633357 | 2.1:+43493675 | MS.gene75907:CDS |
TAAGCAAGCCAATTACAGTA+GGG | 0.634066 | 2.1:-43484687 | None:intergenic |
ATCCAGCTGACCCCAGTTAG+GGG | 0.638084 | 2.1:-43499699 | None:intergenic |
ACCTAGGATGGAGAGTAGCA+CGG | 0.649176 | 2.1:-43492396 | None:intergenic |
GGATCTTAATGGGAAGATCG+TGG | 0.650732 | 2.1:+43478775 | MS.gene75907:CDS |
TCGAAAACGGACACGCCGCA+CGG | 0.655079 | 2.1:-43478628 | None:intergenic |
TGGTTTCTTAGATTCATCGG+TGG | 0.656971 | 2.1:-43492979 | None:intergenic |
GATTGGGATACAGCATCCGT+GGG | 0.663900 | 2.1:+43492578 | MS.gene75907:CDS |
ATCTCAACTATCTCCGACGA+CGG | 0.666343 | 2.1:+43478515 | MS.gene75907:CDS |
CCGATTTGGTTGAGTCTGCG+AGG | 0.667269 | 2.1:+43478849 | MS.gene75907:CDS |
GCTTGAACAGGAAACATGGG+TGG | 0.669451 | 2.1:+43492761 | MS.gene75907:CDS |
GTTGGTGATCTTCCCCACGA+CGG | 0.670385 | 2.1:-43478221 | None:intergenic |
AACATGTGAACTTGTGCTTG+GGG | 0.676513 | 2.1:+43493726 | MS.gene75907:CDS |
TCGATAGATCCTCAGAACAG+AGG | 0.676616 | 2.1:-43485823 | None:intergenic |
TCAACTATCTCCGACGACGG+CGG | 0.678809 | 2.1:+43478518 | MS.gene75907:CDS |
TGTAGCTGTAATGAACTCAT+GGG | 0.683392 | 2.1:-43492455 | None:intergenic |
GTTTGCGGATTTCGTCGAAG+CGG | 0.684356 | 2.1:-43478478 | None:intergenic |
CCTGTGAATGCAGTATCCCA+CGG | 0.692228 | 2.1:-43492594 | None:intergenic |
AAGATGGGCAAAGCTTCTGG+GGG | 0.693528 | 2.1:+43492372 | MS.gene75907:CDS |
TTCGAGATAGAACACGCTGG+AGG | 0.698322 | 2.1:-43498882 | None:intergenic |
AGGTTCGAGATAGAACACGC+TGG | 0.699065 | 2.1:-43498885 | None:intergenic |
AAATCTGATACCCCTAACTG+GGG | 0.705263 | 2.1:+43499689 | MS.gene75907:CDS |
GATTCAAGATTTCTACCACA+CGG | 0.726712 | 2.1:-43493690 | None:intergenic |
AGTGCTTGAACAGGAAACAT+GGG | 0.730117 | 2.1:+43492758 | MS.gene75907:CDS |
TGAGAGTTGGAATAGACCTG+AGG | 0.738748 | 2.1:+43498032 | MS.gene75907:CDS |
AGAAGGCGCTACGTTCCGTG+CGG | 0.742261 | 2.1:+43478613 | MS.gene75907:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 43478197 | 43499763 | 43478197 | ID=MS.gene75907 |
chr2.1 | mRNA | 43478197 | 43499763 | 43478197 | ID=MS.gene75907.t1;Parent=MS.gene75907 |
chr2.1 | exon | 43478197 | 43478973 | 43478197 | ID=MS.gene75907.t1.exon1;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43478197 | 43478973 | 43478197 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43479666 | 43479728 | 43479666 | ID=MS.gene75907.t1.exon2;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43479666 | 43479728 | 43479666 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43480430 | 43480509 | 43480430 | ID=MS.gene75907.t1.exon3;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43480430 | 43480509 | 43480430 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43482535 | 43482652 | 43482535 | ID=MS.gene75907.t1.exon4;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43482535 | 43482652 | 43482535 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43484643 | 43484714 | 43484643 | ID=MS.gene75907.t1.exon5;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43484643 | 43484714 | 43484643 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43485813 | 43485969 | 43485813 | ID=MS.gene75907.t1.exon6;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43485813 | 43485969 | 43485813 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43487509 | 43487597 | 43487509 | ID=MS.gene75907.t1.exon7;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43487509 | 43487597 | 43487509 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43491007 | 43491263 | 43491007 | ID=MS.gene75907.t1.exon8;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43491007 | 43491263 | 43491007 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43492312 | 43492483 | 43492312 | ID=MS.gene75907.t1.exon9;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43492312 | 43492483 | 43492312 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43492568 | 43492651 | 43492568 | ID=MS.gene75907.t1.exon10;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43492568 | 43492651 | 43492568 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43492741 | 43493111 | 43492741 | ID=MS.gene75907.t1.exon11;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43492741 | 43493111 | 43492741 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43493609 | 43493762 | 43493609 | ID=MS.gene75907.t1.exon12;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43493609 | 43493762 | 43493609 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43494872 | 43494953 | 43494872 | ID=MS.gene75907.t1.exon13;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43494872 | 43494953 | 43494872 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43495074 | 43495153 | 43495074 | ID=MS.gene75907.t1.exon14;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43495074 | 43495153 | 43495074 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43497937 | 43498098 | 43497937 | ID=MS.gene75907.t1.exon15;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43497937 | 43498098 | 43497937 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43498871 | 43498938 | 43498871 | ID=MS.gene75907.t1.exon16;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43498871 | 43498938 | 43498871 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43499466 | 43499546 | 43499466 | ID=MS.gene75907.t1.exon17;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43499466 | 43499546 | 43499466 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
chr2.1 | exon | 43499625 | 43499763 | 43499625 | ID=MS.gene75907.t1.exon18;Parent=MS.gene75907.t1 |
chr2.1 | CDS | 43499625 | 43499763 | 43499625 | ID=cds.MS.gene75907.t1;Parent=MS.gene75907.t1 |
Gene Sequence |
Protein sequence |