Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056431.t1 | XP_013446148.1 | 99.8 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 4.30E-222 | 780.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056431.t1 | O22715 | 83.9 | 428 | 69 | 0 | 1 | 428 | 1 | 428 | 4.2e-210 | 731.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056431.t1 | A0A072U2Y3 | 99.8 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 3.1e-222 | 780.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056431 | MS.gene070003 | 0.810459 | 1.14E-50 | -1.69E-46 |
| MS.gene056431 | MS.gene42528 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene056431 | MS.gene45789 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene056431 | MS.gene75907 | 0.814395 | 1.57E-51 | -1.69E-46 |
| MS.gene056431 | MS.gene94231 | 0.822763 | 1.99E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09656 | MS.gene056431 | PPI |
| MS.gene021005 | MS.gene056431 | PPI |
| MS.gene050001 | MS.gene056431 | PPI |
| MS.gene056431 | MS.gene054375 | PPI |
| MS.gene050768 | MS.gene056431 | PPI |
| MS.gene28922 | MS.gene056431 | PPI |
| MS.gene050771 | MS.gene056431 | PPI |
| MS.gene017498 | MS.gene056431 | PPI |
| MS.gene23142 | MS.gene056431 | PPI |
| MS.gene21470 | MS.gene056431 | PPI |
| MS.gene052309 | MS.gene056431 | PPI |
| MS.gene015312 | MS.gene056431 | PPI |
| MS.gene072572 | MS.gene056431 | PPI |
| MS.gene056431 | MS.gene010105 | PPI |
| MS.gene003372 | MS.gene056431 | PPI |
| MS.gene031829 | MS.gene056431 | PPI |
| MS.gene75781 | MS.gene056431 | PPI |
| MS.gene059672 | MS.gene056431 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056431.t1 | MTR_8g069565 | 99.766 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 0.0 | 885 |
| MS.gene056431.t1 | MTR_5g033500 | 94.159 | 428 | 25 | 0 | 1 | 428 | 1 | 428 | 0.0 | 850 |
| MS.gene056431.t1 | MTR_5g033500 | 92.834 | 307 | 22 | 0 | 1 | 307 | 1 | 307 | 0.0 | 606 |
| MS.gene056431.t1 | MTR_5g014330 | 44.091 | 440 | 229 | 7 | 1 | 426 | 1 | 437 | 2.75e-125 | 370 |
| MS.gene056431.t1 | MTR_5g014330 | 42.184 | 403 | 216 | 7 | 1 | 389 | 1 | 400 | 8.97e-105 | 317 |
| MS.gene056431.t1 | MTR_3g112190 | 34.086 | 443 | 268 | 8 | 6 | 427 | 3 | 442 | 7.79e-84 | 264 |
| MS.gene056431.t1 | MTR_5g066050 | 34.141 | 454 | 262 | 10 | 6 | 427 | 3 | 451 | 6.85e-82 | 259 |
| MS.gene056431.t1 | MTR_5g066050 | 34.216 | 453 | 262 | 10 | 6 | 427 | 3 | 450 | 8.90e-82 | 259 |
| MS.gene056431.t1 | MTR_7g111870 | 26.424 | 439 | 272 | 12 | 7 | 426 | 4 | 410 | 1.28e-45 | 163 |
| MS.gene056431.t1 | MTR_7g111870 | 27.385 | 325 | 204 | 6 | 7 | 318 | 4 | 309 | 3.46e-42 | 152 |
| MS.gene056431.t1 | MTR_3g452810 | 72.727 | 66 | 17 | 1 | 49 | 113 | 19 | 84 | 2.08e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056431.t1 | AT1G60780 | 90.187 | 428 | 42 | 0 | 1 | 428 | 1 | 428 | 0.0 | 828 |
| MS.gene056431.t1 | AT1G10730 | 86.916 | 428 | 56 | 0 | 1 | 428 | 1 | 428 | 0.0 | 791 |
| MS.gene056431.t1 | AT5G46630 | 43.864 | 440 | 230 | 5 | 1 | 426 | 1 | 437 | 2.44e-129 | 380 |
| MS.gene056431.t1 | AT5G46630 | 42.548 | 416 | 222 | 5 | 1 | 402 | 1 | 413 | 3.68e-116 | 347 |
| MS.gene056431.t1 | AT4G24550 | 32.308 | 455 | 268 | 8 | 6 | 427 | 4 | 451 | 1.98e-83 | 263 |
| MS.gene056431.t1 | AT4G24550 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 2.22e-66 | 217 |
| MS.gene056431.t1 | AT4G24550 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 3.04e-66 | 216 |
| MS.gene056431.t1 | AT1G56590 | 26.591 | 440 | 276 | 11 | 7 | 427 | 4 | 415 | 1.35e-45 | 163 |
Find 92 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGGTTAAGCCTTTATTT+TGG | 0.194447 | 8.2:-33536709 | MS.gene056431:intron |
| GAATCTTCGCCTCGGTATAT+TGG | 0.238232 | 8.2:+33539268 | None:intergenic |
| AAAAGCTAGGAGTCAATTTA+AGG | 0.269172 | 8.2:-33536636 | MS.gene056431:CDS |
| CCCATTGATGTCCGCACATT+TGG | 0.273339 | 8.2:+33536382 | None:intergenic |
| AATCTTCGCCTCGGTATATT+GGG | 0.287297 | 8.2:+33539269 | None:intergenic |
| AATTGGAAGAGGAATCTCTT+AGG | 0.291550 | 8.2:-33539436 | MS.gene056431:CDS |
| TGCTTCCTCGTCTGTTATGC+TGG | 0.298393 | 8.2:+33536152 | None:intergenic |
| TGTGCTTCCACCCAAAATAA+AGG | 0.331488 | 8.2:+33536698 | None:intergenic |
| TATTGAGAAAAGTGGGTATC+AGG | 0.341880 | 8.2:-33535542 | MS.gene056431:CDS |
| TTGAAGATTATTGAGAAAAG+TGG | 0.347409 | 8.2:-33535550 | MS.gene056431:CDS |
| TGAACTACTTGATGAAATAA+TGG | 0.363893 | 8.2:-33539304 | MS.gene056431:CDS |
| TAATTAGGTCTGATGTTGTT+GGG | 0.372995 | 8.2:-33538991 | MS.gene056431:CDS |
| ATAGCAATGGGCAAATAATT+AGG | 0.375714 | 8.2:-33539006 | MS.gene056431:CDS |
| TTGTTCGATCATTCTCAAAT+CGG | 0.376459 | 8.2:+33536883 | None:intergenic |
| CAGATTAATGCATCTTTCTC+AGG | 0.379501 | 8.2:+33536343 | None:intergenic |
| TCAAAGGCCGCGTTCTCATT+TGG | 0.383267 | 8.2:-33540253 | MS.gene056431:CDS |
| CTGAGAAAGATGCATTAATC+TGG | 0.386776 | 8.2:-33536342 | MS.gene056431:CDS |
| TGACCCATCAGGTGGGATAA+AGG | 0.393185 | 8.2:+33536857 | None:intergenic |
| ATTCCGGACACAGTAAAATA+TGG | 0.394093 | 8.2:+33536087 | None:intergenic |
| AAATGACAGAATATTATTAG+AGG | 0.397899 | 8.2:-33537119 | MS.gene056431:CDS |
| GATCCAGTTGTATATGATAA+TGG | 0.403071 | 8.2:-33539696 | MS.gene056431:CDS |
| CGATTCGATGTAGGAAGAAA+AGG | 0.415593 | 8.2:+33539595 | None:intergenic |
| CTTGATGAAATAATGGACTT+TGG | 0.418430 | 8.2:-33539297 | MS.gene056431:CDS |
| CCAAATGTGCGGACATCAAT+GGG | 0.434521 | 8.2:-33536382 | MS.gene056431:CDS |
| TGAAGATGAGAACATATTTG+AGG | 0.450190 | 8.2:-33538964 | MS.gene056431:intron |
| TTTGGAGTGGTTGCATCAGC+AGG | 0.457237 | 8.2:+33536400 | None:intergenic |
| TCCAAATGTGCGGACATCAA+TGG | 0.462969 | 8.2:-33536383 | MS.gene056431:CDS |
| TGTTCGATCATTCTCAAATC+GGG | 0.468696 | 8.2:+33536884 | None:intergenic |
| ACACCATTATCATATACAAC+TGG | 0.471229 | 8.2:+33539693 | None:intergenic |
| TAGGGATAACTTTGTTGTTG+TGG | 0.472156 | 8.2:-33539417 | MS.gene056431:intron |
| CGGAATCACTCTCCAATGTC+AGG | 0.473605 | 8.2:-33540305 | None:intergenic |
| GCAGAGGCTGCGCCTGACAT+TGG | 0.473987 | 8.2:+33540293 | None:intergenic |
| CAAGACAGATGCTTATAGAA+TGG | 0.474086 | 8.2:-33539232 | MS.gene056431:CDS |
| TGAAGATTATTGAGAAAAGT+GGG | 0.477745 | 8.2:-33535549 | MS.gene056431:CDS |
| CCGTCAGGAGTACATGTTAA+GGG | 0.479105 | 8.2:-33536190 | MS.gene056431:intron |
| AACATACTTGTCAATAGCAA+TGG | 0.485760 | 8.2:-33539019 | MS.gene056431:CDS |
| CACCAAGCTCATCGAGAAAG+AGG | 0.487657 | 8.2:-33540183 | MS.gene056431:intron |
| ATTAAGAAATACCTGTATTC+CGG | 0.487708 | 8.2:+33536071 | None:intergenic |
| ACCGTCAGGAGTACATGTTA+AGG | 0.490065 | 8.2:-33536191 | MS.gene056431:intron |
| AACCTCTTTCTCGATGAGCT+TGG | 0.491443 | 8.2:+33540181 | None:intergenic |
| ATTGGAAGAGGAATCTCTTA+GGG | 0.498057 | 8.2:-33539435 | MS.gene056431:CDS |
| ATCTCAAACTTTACACGTAT+AGG | 0.499585 | 8.2:+33536111 | None:intergenic |
| GGGAAAAGCGATTGACTTGG+AGG | 0.500831 | 8.2:-33537077 | MS.gene056431:CDS |
| ATAATTAGGTCTGATGTTGT+TGG | 0.509969 | 8.2:-33538992 | MS.gene056431:CDS |
| ATCAAATCAAATGACCCATC+AGG | 0.513153 | 8.2:+33536846 | None:intergenic |
| ACATACTTGTCAATAGCAAT+GGG | 0.514301 | 8.2:-33539018 | MS.gene056431:CDS |
| CAAGGGAAAAGCGATTGACT+TGG | 0.516810 | 8.2:-33537080 | MS.gene056431:CDS |
| GCAGGGAGATCAACAGTCTC+AGG | 0.519937 | 8.2:-33539718 | MS.gene056431:intron |
| GGCATGCCAGAGTGTAAACT+TGG | 0.520126 | 8.2:-33537145 | MS.gene056431:CDS |
| TCAATTAATACCTTGCCTCC+AGG | 0.520387 | 8.2:+33536304 | None:intergenic |
| TACAGCATTTGTTACAGCCA+TGG | 0.521446 | 8.2:+33539191 | None:intergenic |
| GGCACAAGGTAGAGCGACCA+AGG | 0.523950 | 8.2:-33537098 | MS.gene056431:CDS |
| TTACATCAACGATTCGATGT+AGG | 0.528601 | 8.2:+33539586 | None:intergenic |
| ATTTCCTTTATCCCACCTGA+TGG | 0.531143 | 8.2:-33536861 | MS.gene056431:CDS |
| GCTGTATCTTGGCGTAGTGA+AGG | 0.533562 | 8.2:-33539174 | MS.gene056431:CDS |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.534878 | 8.2:-33535531 | MS.gene056431:CDS |
| CTGTATCTTGGCGTAGTGAA+GGG | 0.543067 | 8.2:-33539173 | MS.gene056431:CDS |
| GTGAGATACATAACAATGGC+TGG | 0.544124 | 8.2:-33535508 | MS.gene056431:CDS |
| ACAGCATTTGTTACAGCCAT+GGG | 0.548624 | 8.2:+33539192 | None:intergenic |
| CTGTAACAAATGCTGTATCT+TGG | 0.552013 | 8.2:-33539185 | MS.gene056431:CDS |
| GCTTCCTCGTCTGTTATGCT+GGG | 0.552601 | 8.2:+33536153 | None:intergenic |
| TGGCTGGAGAGTATGAGTTA+AGG | 0.553729 | 8.2:-33535492 | MS.gene056431:CDS |
| TTGATGAAGGTGTGTGCGAT+TGG | 0.569907 | 8.2:-33536907 | MS.gene056431:intron |
| CTCATTTGGCGCGATTATCG+TGG | 0.571817 | 8.2:-33540239 | MS.gene056431:CDS |
| TTGAGATTACGGTAAAAGCT+AGG | 0.572472 | 8.2:-33536649 | MS.gene056431:CDS |
| GTGGTTGCATCAGCAGGCAC+AGG | 0.573449 | 8.2:+33536406 | None:intergenic |
| AATTAGGTCTGATGTTGTTG+GGG | 0.573919 | 8.2:-33538990 | MS.gene056431:CDS |
| TTTCCTTTATCCCACCTGAT+GGG | 0.574034 | 8.2:-33536860 | MS.gene056431:CDS |
| TTTGTCTAGTTGCTGTCATG+AGG | 0.575568 | 8.2:+33539637 | None:intergenic |
| CTCTTCCTTCTCGATATCAA+AGG | 0.575726 | 8.2:-33540269 | MS.gene056431:CDS |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.587489 | 8.2:-33535530 | MS.gene056431:CDS |
| ATTGTTATGTATCTCACCCA+TGG | 0.591728 | 8.2:+33535514 | None:intergenic |
| TTTAAGCCAAGTTTACACTC+TGG | 0.595352 | 8.2:+33537139 | None:intergenic |
| GCACAAGGTAGAGCGACCAA+GGG | 0.598136 | 8.2:-33537097 | MS.gene056431:CDS |
| ATCTTCGCCTCGGTATATTG+GGG | 0.605383 | 8.2:+33539270 | None:intergenic |
| AAATCAAATGACCCATCAGG+TGG | 0.606484 | 8.2:+33536849 | None:intergenic |
| CTCGCTAAGAATCTTCGCCT+CGG | 0.611887 | 8.2:+33539260 | None:intergenic |
| CGCGGCCTTTGATATCGAGA+AGG | 0.617009 | 8.2:+33540264 | None:intergenic |
| TGATGTCCGCACATTTGGAG+TGG | 0.623609 | 8.2:+33536387 | None:intergenic |
| GCATTTGTTACAGCCATGGG+AGG | 0.650662 | 8.2:+33539195 | None:intergenic |
| AGTTACACAGAGACCTCCCA+TGG | 0.655937 | 8.2:-33539208 | MS.gene056431:CDS |
| TCTTCGCCTCGGTATATTGG+GGG | 0.659624 | 8.2:+33539271 | None:intergenic |
| GAAGCGTTCAGCTTCAACAG+CGG | 0.665982 | 8.2:+33540208 | None:intergenic |
| GACATACAGACTCAGCACAC+AGG | 0.667857 | 8.2:-33536823 | MS.gene056431:intron |
| ATGCAACCACTCCAAATGTG+CGG | 0.670804 | 8.2:-33536393 | MS.gene056431:CDS |
| AATCAAATGACCCATCAGGT+GGG | 0.675073 | 8.2:+33536850 | None:intergenic |
| GGAGTCAATTTAAGGAACGT+AGG | 0.677567 | 8.2:-33536628 | MS.gene056431:intron |
| ATCGAGAAGGAAGAGAGCAG+AGG | 0.685565 | 8.2:+33540277 | None:intergenic |
| ATGGGTGAGATACATAACAA+TGG | 0.702359 | 8.2:-33535512 | MS.gene056431:CDS |
| TCTTCCCAGCATAACAGACG+AGG | 0.716182 | 8.2:-33536157 | MS.gene056431:CDS |
| AGAATATTATTAGAGGCACA+AGG | 0.724642 | 8.2:-33537112 | MS.gene056431:CDS |
| AATCGCGCCAAATGAGAACG+CGG | 0.730670 | 8.2:+33540246 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTGTTTTGATTTAT+AGG | - | chr8.2:33540192-33540211 | MS.gene056431:CDS | 10.0% |
| !!! | ATTTTGATTAAATAAATCAA+AGG | + | chr8.2:33540161-33540180 | None:intergenic | 10.0% |
| !! | AAATACAGATTTGTATAATA+TGG | - | chr8.2:33537767-33537786 | MS.gene056431:intron | 15.0% |
| !! | AATACAGATTTGTATAATAT+GGG | - | chr8.2:33537768-33537787 | MS.gene056431:intron | 15.0% |
| !! | ATAAATAGATATATGAAGAA+TGG | - | chr8.2:33537855-33537874 | MS.gene056431:intron | 15.0% |
| !! | TAGATAGTAAATTCTTAAAT+TGG | - | chr8.2:33539919-33539938 | MS.gene056431:intron | 15.0% |
| !!! | ATTGAGTAACTAAATTATTT+TGG | + | chr8.2:33536937-33536956 | None:intergenic | 15.0% |
| !!! | TAATTTTTCTCAAATCATTA+CGG | - | chr8.2:33535786-33535805 | MS.gene056431:intron | 15.0% |
| !!! | TATTTTATAAGAAGAAACTA+GGG | + | chr8.2:33537752-33537771 | None:intergenic | 15.0% |
| !!! | TGTAAATTATAAAGTACTTT+GGG | + | chr8.2:33537628-33537647 | None:intergenic | 15.0% |
| !!! | TGTATTTCTAATATGATTTA+AGG | + | chr8.2:33537989-33538008 | None:intergenic | 15.0% |
| !! | AAAAAACATGACATCATAAT+TGG | - | chr8.2:33539962-33539981 | MS.gene056431:intron | 20.0% |
| !! | AAAAATGGTTATTATAGAAG+GGG | - | chr8.2:33538019-33538038 | MS.gene056431:intron | 20.0% |
| !! | AAAAGCTTAGAACAATTTAT+AGG | + | chr8.2:33537295-33537314 | None:intergenic | 20.0% |
| !! | AAATATCATATGATCAACAA+TGG | + | chr8.2:33539041-33539060 | None:intergenic | 20.0% |
| !! | AAATGACAGAATATTATTAG+AGG | - | chr8.2:33538654-33538673 | MS.gene056431:intron | 20.0% |
| !! | AAGAATTTAAGTATGGTAAA+AGG | - | chr8.2:33538424-33538443 | MS.gene056431:intron | 20.0% |
| !! | AAGATACATAATACTAGAAA+TGG | + | chr8.2:33539768-33539787 | None:intergenic | 20.0% |
| !! | AATTATGGTTCAAATTTGAA+TGG | - | chr8.2:33535676-33535695 | MS.gene056431:intron | 20.0% |
| !! | AATTTAGTTACTCAATTTCA+AGG | - | chr8.2:33536941-33536960 | MS.gene056431:intron | 20.0% |
| !! | ACAAAAATGGTTATTATAGA+AGG | - | chr8.2:33538017-33538036 | MS.gene056431:intron | 20.0% |
| !! | AGAATTTAAGTATGGTAAAA+GGG | - | chr8.2:33538425-33538444 | MS.gene056431:intron | 20.0% |
| !! | AGATACATAATACTAGAAAT+GGG | + | chr8.2:33539767-33539786 | None:intergenic | 20.0% |
| !! | ATACAGATTTGTATAATATG+GGG | - | chr8.2:33537769-33537788 | MS.gene056431:intron | 20.0% |
| !! | ATCATATGATATTTATTTCC+AGG | - | chr8.2:33539047-33539066 | MS.gene056431:CDS | 20.0% |
| !! | CAAAAATGGTTATTATAGAA+GGG | - | chr8.2:33538018-33538037 | MS.gene056431:intron | 20.0% |
| !! | TAAGTATGGTAAAATAGTTA+AGG | - | chr8.2:33537816-33537835 | MS.gene056431:intron | 20.0% |
| !! | TGCAATAATTAATGATTGAT+TGG | - | chr8.2:33536276-33536295 | MS.gene056431:intron | 20.0% |
| !!! | ATACATTTTTCGAACAAAAA+TGG | - | chr8.2:33538004-33538023 | MS.gene056431:intron | 20.0% |
| !!! | CATTTAGATATGTGATTTTA+TGG | - | chr8.2:33536671-33536690 | MS.gene056431:CDS | 20.0% |
| !!! | GTAAATTATAAAGTACTTTG+GGG | + | chr8.2:33537627-33537646 | None:intergenic | 20.0% |
| !!! | GTATTTTATAAGAAGAAACT+AGG | + | chr8.2:33537753-33537772 | None:intergenic | 20.0% |
| !!! | GTGTAAATTATAAAGTACTT+TGG | + | chr8.2:33537629-33537648 | None:intergenic | 20.0% |
| !!! | GTTTTGTAAGAATTTAAGTA+TGG | - | chr8.2:33538417-33538436 | MS.gene056431:intron | 20.0% |
| !!! | GTTTTGTTAGAATATAAGTA+TGG | - | chr8.2:33537802-33537821 | MS.gene056431:intron | 20.0% |
| !!! | TTTTTTCAGTGTTATGTTTT+CGG | - | chr8.2:33536000-33536019 | MS.gene056431:intron | 20.0% |
| ! | AAACAAAATCCATTAGTTAG+TGG | + | chr8.2:33536703-33536722 | None:intergenic | 25.0% |
| ! | AAAGGATAATACAATATGTG+TGG | + | chr8.2:33540125-33540144 | None:intergenic | 25.0% |
| ! | AACTACTTACCTTGAATTTA+TGG | - | chr8.2:33539233-33539252 | MS.gene056431:CDS | 25.0% |
| ! | AATTCAATGTAATCACATGT+CGG | + | chr8.2:33535763-33535782 | None:intergenic | 25.0% |
| ! | AATTGGAAGATAAATACTGA+TGG | - | chr8.2:33539936-33539955 | MS.gene056431:intron | 25.0% |
| ! | ATACATCTTCACGTTTATAA+TGG | + | chr8.2:33536651-33536670 | None:intergenic | 25.0% |
| ! | ATATATTATCCCTCTCATTT+CGG | + | chr8.2:33538215-33538234 | None:intergenic | 25.0% |
| ! | ATCAAAAAAATGGAAAGTAG+AGG | + | chr8.2:33537490-33537509 | None:intergenic | 25.0% |
| ! | ATGAAATGAAGGAATGAATT+GGG | + | chr8.2:33537436-33537455 | None:intergenic | 25.0% |
| ! | ATTAAGAAATACCTGTATTC+CGG | + | chr8.2:33539705-33539724 | None:intergenic | 25.0% |
| ! | ATTGGAAGATAAATACTGAT+GGG | - | chr8.2:33539937-33539956 | MS.gene056431:intron | 25.0% |
| ! | CAAAAGTCTCATCAAAAAAA+TGG | + | chr8.2:33537500-33537519 | None:intergenic | 25.0% |
| ! | GAAGAAAGAAATGAGAATTA+AGG | + | chr8.2:33535627-33535646 | None:intergenic | 25.0% |
| ! | GATTCTAACATTATATGATG+TGG | + | chr8.2:33540094-33540113 | None:intergenic | 25.0% |
| ! | GGGTTTATTTGTAGTTTATT+TGG | - | chr8.2:33537211-33537230 | MS.gene056431:intron | 25.0% |
| ! | GTGTTTAGAAGTTTATAAGA+CGG | + | chr8.2:33537369-33537388 | None:intergenic | 25.0% |
| ! | TACTTTATAATTTACACTCC+TGG | - | chr8.2:33537632-33537651 | MS.gene056431:intron | 25.0% |
| ! | TATATGATAGAATTCAAGCT+GGG | + | chr8.2:33537461-33537480 | None:intergenic | 25.0% |
| ! | TATGATACATTCTGTTTGAT+TGG | - | chr8.2:33538988-33539007 | MS.gene056431:CDS | 25.0% |
| ! | TGAACTACTTGATGAAATAA+TGG | - | chr8.2:33536469-33536488 | MS.gene056431:intron | 25.0% |
| ! | TGAAGATTATTGAGAAAAGT+GGG | - | chr8.2:33540224-33540243 | MS.gene056431:CDS | 25.0% |
| ! | TGCTTTCAATTAATTCATGT+CGG | + | chr8.2:33535876-33535895 | None:intergenic | 25.0% |
| ! | TGTTTAGAAGTTTATAAGAC+GGG | + | chr8.2:33537368-33537387 | None:intergenic | 25.0% |
| ! | TTCAAGTCAAGTAGAATAAT+GGG | + | chr8.2:33537125-33537144 | None:intergenic | 25.0% |
| ! | TTCTTATTGTAATTCTTTGC+TGG | + | chr8.2:33538098-33538117 | None:intergenic | 25.0% |
| ! | TTGAAGATTATTGAGAAAAG+TGG | - | chr8.2:33540223-33540242 | MS.gene056431:CDS | 25.0% |
| !! | AATTGAGAAATTTTCGATTG+CGG | - | chr8.2:33535967-33535986 | MS.gene056431:intron | 25.0% |
| !! | TTAGTAATATGACTTGCATA+GGG | - | chr8.2:33536902-33536921 | MS.gene056431:intron | 25.0% |
| !! | TTGGACTAGAAATACTTTAT+CGG | + | chr8.2:33538176-33538195 | None:intergenic | 25.0% |
| !! | TTTAGTAATATGACTTGCAT+AGG | - | chr8.2:33536901-33536920 | MS.gene056431:CDS | 25.0% |
| !!! | AAAACTGTATATTAGTTTGC+TGG | - | chr8.2:33536249-33536268 | MS.gene056431:intron | 25.0% |
| !!! | AACTAATGGATTTTGTTTTC+AGG | - | chr8.2:33536705-33536724 | MS.gene056431:CDS | 25.0% |
| !!! | ATTTTGTTTTCAGGTTTTCT+TGG | - | chr8.2:33536714-33536733 | MS.gene056431:intron | 25.0% |
| !!! | TGTTACTTTTGTGCTAATTA+TGG | - | chr8.2:33535661-33535680 | MS.gene056431:intron | 25.0% |
| !!! | TGTTTTTAGAAGCTATTCTA+AGG | + | chr8.2:33537329-33537348 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTGTTATGTTTTC+GGG | - | chr8.2:33536001-33536020 | MS.gene056431:intron | 25.0% |
| !!! | TTTTTTGATGAGACTTTTGA+GGG | - | chr8.2:33537501-33537520 | MS.gene056431:intron | 25.0% |
| !!! | TTTTTTTGATGAGACTTTTG+AGG | - | chr8.2:33537500-33537519 | MS.gene056431:intron | 25.0% |
| AAAAAGTCGGATTGAGATTA+CGG | - | chr8.2:33539113-33539132 | MS.gene056431:intron | 30.0% | |
| AAAAGCTAGGAGTCAATTTA+AGG | - | chr8.2:33539137-33539156 | MS.gene056431:intron | 30.0% | |
| AAACTACAAGAAAAATGAGG+TGG | - | chr8.2:33536625-33536644 | MS.gene056431:intron | 30.0% | |
| AACATACTTGTCAATAGCAA+TGG | - | chr8.2:33536754-33536773 | MS.gene056431:intron | 30.0% | |
| AAGAAATGAGAATTAAGGTG+TGG | + | chr8.2:33535622-33535641 | None:intergenic | 30.0% | |
| ACACCATTATCATATACAAC+TGG | + | chr8.2:33536083-33536102 | None:intergenic | 30.0% | |
| ACAGAATGTATCATATCTAG+AGG | + | chr8.2:33538983-33539002 | None:intergenic | 30.0% | |
| ACATACTTGTCAATAGCAAT+GGG | - | chr8.2:33536755-33536774 | MS.gene056431:intron | 30.0% | |
| AGATATATGAAGAATGGATC+AGG | - | chr8.2:33537861-33537880 | MS.gene056431:intron | 30.0% | |
| AGGAAAAAGAAAAACTACTG+TGG | + | chr8.2:33538244-33538263 | None:intergenic | 30.0% | |
| AGGTTTCATAATTTCCAGTA+GGG | - | chr8.2:33537179-33537198 | MS.gene056431:intron | 30.0% | |
| ATAATTAGGTCTGATGTTGT+TGG | - | chr8.2:33536781-33536800 | MS.gene056431:intron | 30.0% | |
| ATAGCAATGGGCAAATAATT+AGG | - | chr8.2:33536767-33536786 | MS.gene056431:intron | 30.0% | |
| ATATGATAGAATTCAAGCTG+GGG | + | chr8.2:33537460-33537479 | None:intergenic | 30.0% | |
| ATCTCAAACTTTACACGTAT+AGG | + | chr8.2:33539665-33539684 | None:intergenic | 30.0% | |
| ATGGAGAAGTAAATACATAC+GGG | + | chr8.2:33539290-33539309 | None:intergenic | 30.0% | |
| ATGGTAAAATAGTTAAGGCT+TGG | - | chr8.2:33537821-33537840 | MS.gene056431:intron | 30.0% | |
| ATTTGTATAATATGGGGTCT+TGG | - | chr8.2:33537775-33537794 | MS.gene056431:intron | 30.0% | |
| CAAAACAAAACTGTTGATCA+CGG | + | chr8.2:33540021-33540040 | None:intergenic | 30.0% | |
| CAAGTCAATCCATAAATTCA+AGG | + | chr8.2:33539245-33539264 | None:intergenic | 30.0% | |
| CGATTGTGAAATAACGAATT+TGG | - | chr8.2:33539545-33539564 | MS.gene056431:intron | 30.0% | |
| CTTCAAGTCAAGTAGAATAA+TGG | + | chr8.2:33537126-33537145 | None:intergenic | 30.0% | |
| GAATTGGGTGTTAATTGTAA+GGG | + | chr8.2:33537421-33537440 | None:intergenic | 30.0% | |
| GAATTTCATGCTATTGAGAT+TGG | - | chr8.2:33536862-33536881 | MS.gene056431:CDS | 30.0% | |
| GACTTAAGATAGTAACATTC+TGG | - | chr8.2:33537662-33537681 | MS.gene056431:intron | 30.0% | |
| GATCCAGTTGTATATGATAA+TGG | - | chr8.2:33536077-33536096 | MS.gene056431:intron | 30.0% | |
| GATGAAATGAAGGAATGAAT+TGG | + | chr8.2:33537437-33537456 | None:intergenic | 30.0% | |
| GATGGAGAAGTAAATACATA+CGG | + | chr8.2:33539291-33539310 | None:intergenic | 30.0% | |
| GCTAAACTACAAGAAAAATG+AGG | - | chr8.2:33536622-33536641 | MS.gene056431:intron | 30.0% | |
| GTATATGATAGAATTCAAGC+TGG | + | chr8.2:33537462-33537481 | None:intergenic | 30.0% | |
| GTATTATCCTTTGTCAGTTA+AGG | - | chr8.2:33540133-33540152 | MS.gene056431:intron | 30.0% | |
| TAAGTATGGTAAAAGGGTAA+AGG | - | chr8.2:33538431-33538450 | MS.gene056431:intron | 30.0% | |
| TAATTAGGTCTGATGTTGTT+GGG | - | chr8.2:33536782-33536801 | MS.gene056431:intron | 30.0% | |
| TAGGTTTCATAATTTCCAGT+AGG | - | chr8.2:33537178-33537197 | MS.gene056431:intron | 30.0% | |
| TGAAGATGAGAACATATTTG+AGG | - | chr8.2:33536809-33536828 | MS.gene056431:intron | 30.0% | |
| TGAATTGGGTGTTAATTGTA+AGG | + | chr8.2:33537422-33537441 | None:intergenic | 30.0% | |
| TTATTATAGAAGGGGTAAAG+TGG | - | chr8.2:33538027-33538046 | MS.gene056431:intron | 30.0% | |
| TTCAACTCAAGATTTAAGCA+TGG | - | chr8.2:33537950-33537969 | MS.gene056431:intron | 30.0% | |
| TTGTTCGATCATTCTCAAAT+CGG | + | chr8.2:33538893-33538912 | None:intergenic | 30.0% | |
| TTTATAATTTACACTCCTGG+AGG | - | chr8.2:33537635-33537654 | MS.gene056431:intron | 30.0% | |
| TTTATGTGGTTGTGTTTAAG+TGG | + | chr8.2:33537060-33537079 | None:intergenic | 30.0% | |
| ! | AAAATAAGATCTTTTCCTGG+AGG | - | chr8.2:33539454-33539473 | MS.gene056431:CDS | 30.0% |
| ! | AGAATATTATTAGAGGCACA+AGG | - | chr8.2:33538661-33538680 | MS.gene056431:intron | 30.0% |
| ! | AGATTGGCTACTAGTTATTT+GGG | - | chr8.2:33536878-33536897 | MS.gene056431:CDS | 30.0% |
| ! | AGCTTCTAAAAACAGCTTAT+AGG | - | chr8.2:33537335-33537354 | MS.gene056431:intron | 30.0% |
| ! | ATACCATATTTTACTGTGTC+CGG | - | chr8.2:33539683-33539702 | MS.gene056431:CDS | 30.0% |
| ! | CATTATTCTACTTGACTTGA+AGG | - | chr8.2:33537124-33537143 | MS.gene056431:CDS | 30.0% |
| ! | GCTTCTAAAAACAGCTTATA+GGG | - | chr8.2:33537336-33537355 | MS.gene056431:intron | 30.0% |
| ! | TAGTAATATGACTTGCATAG+GGG | - | chr8.2:33536903-33536922 | MS.gene056431:intron | 30.0% |
| ! | TCATTTTCATGTTTTCCATG+GGG | - | chr8.2:33539829-33539848 | MS.gene056431:intron | 30.0% |
| ! | TGGAAAATAAGATCTTTTCC+TGG | - | chr8.2:33539451-33539470 | MS.gene056431:CDS | 30.0% |
| ! | TTTGTGTTGATACTTGATGA+AGG | - | chr8.2:33538853-33538872 | MS.gene056431:intron | 30.0% |
| ! | TTTTTGATGAGACTTTTGAG+GGG | - | chr8.2:33537502-33537521 | MS.gene056431:intron | 30.0% |
| !! | CTTGATGAAATAATGGACTT+TGG | - | chr8.2:33536476-33536495 | MS.gene056431:intron | 30.0% |
| !! | GGTTTTCAAGCATTATTTTG+AGG | - | chr8.2:33536314-33536333 | MS.gene056431:intron | 30.0% |
| !! | GTCATTTTCATGTTTTCCAT+GGG | - | chr8.2:33539828-33539847 | MS.gene056431:intron | 30.0% |
| !! | TCGAAAAGCATTCAAAAAGT+CGG | - | chr8.2:33539100-33539119 | MS.gene056431:intron | 30.0% |
| !!! | CAAGCATTATTTTGAGGAAT+TGG | - | chr8.2:33536320-33536339 | MS.gene056431:CDS | 30.0% |
| !!! | TGTCATTTTCATGTTTTCCA+TGG | - | chr8.2:33539827-33539846 | MS.gene056431:intron | 30.0% |
| !!! | TTATTTTGAGGAATTGGAAG+AGG | - | chr8.2:33536326-33536345 | MS.gene056431:CDS | 30.0% |
| AAGGAACGTAGGTACTAATA+TGG | - | chr8.2:33539156-33539175 | MS.gene056431:CDS | 35.0% | |
| AATGGGAAATCGCTTATCTT+TGG | + | chr8.2:33537108-33537127 | None:intergenic | 35.0% | |
| AATTAGGTCTGATGTTGTTG+GGG | - | chr8.2:33536783-33536802 | MS.gene056431:intron | 35.0% | |
| AATTGGAAGAGGAATCTCTT+AGG | - | chr8.2:33536337-33536356 | MS.gene056431:CDS | 35.0% | |
| ACACAACCACATAAAATCCT+TGG | - | chr8.2:33537065-33537084 | MS.gene056431:CDS | 35.0% | |
| ACTGTTATGGAAATCGTCTA+GGG | - | chr8.2:33538483-33538502 | MS.gene056431:intron | 35.0% | |
| AGACTAAAACAGTGAAGTAC+CGG | + | chr8.2:33538385-33538404 | None:intergenic | 35.0% | |
| AGTAGTTGTATCTTCCATGA+TGG | + | chr8.2:33539220-33539239 | None:intergenic | 35.0% | |
| ATCAAATCAAATGACCCATC+AGG | + | chr8.2:33538930-33538949 | None:intergenic | 35.0% | |
| ATGGGTGAGATACATAACAA+TGG | - | chr8.2:33540261-33540280 | MS.gene056431:CDS | 35.0% | |
| ATTCCGGACACAGTAAAATA+TGG | + | chr8.2:33539689-33539708 | None:intergenic | 35.0% | |
| ATTGGAAGAGGAATCTCTTA+GGG | - | chr8.2:33536338-33536357 | MS.gene056431:CDS | 35.0% | |
| ATTGTTATGTATCTCACCCA+TGG | + | chr8.2:33540262-33540281 | None:intergenic | 35.0% | |
| CAAGACAGATGCTTATAGAA+TGG | - | chr8.2:33536541-33536560 | MS.gene056431:intron | 35.0% | |
| CACAACCACATAAAATCCTT+GGG | - | chr8.2:33537066-33537085 | MS.gene056431:CDS | 35.0% | |
| CAGATTAATGCATCTTTCTC+AGG | + | chr8.2:33539433-33539452 | None:intergenic | 35.0% | |
| CTGAGAAAGATGCATTAATC+TGG | - | chr8.2:33539431-33539450 | MS.gene056431:CDS | 35.0% | |
| CTGTAACAAATGCTGTATCT+TGG | - | chr8.2:33536588-33536607 | MS.gene056431:intron | 35.0% | |
| CTGTATTACACAACAAGACA+TGG | + | chr8.2:33538607-33538626 | None:intergenic | 35.0% | |
| GACGATTTCCATAACAGTAT+AGG | + | chr8.2:33538481-33538500 | None:intergenic | 35.0% | |
| GATACATTCTGTTTGATTGG+TGG | - | chr8.2:33538991-33539010 | MS.gene056431:CDS | 35.0% | |
| GATTGATTGGTATGTGATTG+AGG | - | chr8.2:33536289-33536308 | MS.gene056431:intron | 35.0% | |
| GCATAATGCTCTGCAATATT+TGG | - | chr8.2:33537533-33537552 | MS.gene056431:intron | 35.0% | |
| TAAGATAGTAACATTCTGGC+AGG | - | chr8.2:33537666-33537685 | MS.gene056431:intron | 35.0% | |
| TACTGTTATGGAAATCGTCT+AGG | - | chr8.2:33538482-33538501 | MS.gene056431:intron | 35.0% | |
| TATGATAGAATTCAAGCTGG+GGG | + | chr8.2:33537459-33537478 | None:intergenic | 35.0% | |
| TATTGAGAAAAGTGGGTATC+AGG | - | chr8.2:33540231-33540250 | MS.gene056431:CDS | 35.0% | |
| TCTATTAACACTCAGTGAAC+TGG | + | chr8.2:33539903-33539922 | None:intergenic | 35.0% | |
| TGGAGAAGTAAATACATACG+GGG | + | chr8.2:33539289-33539308 | None:intergenic | 35.0% | |
| TGTTCGATCATTCTCAAATC+GGG | + | chr8.2:33538892-33538911 | None:intergenic | 35.0% | |
| TTACATCAACGATTCGATGT+AGG | + | chr8.2:33536190-33536209 | None:intergenic | 35.0% | |
| TTGAGATTACGGTAAAAGCT+AGG | - | chr8.2:33539124-33539143 | MS.gene056431:intron | 35.0% | |
| TTGTTGAAATAGCTCACACA+CGG | - | chr8.2:33537149-33537168 | MS.gene056431:CDS | 35.0% | |
| TTTAAGCCAAGTTTACACTC+TGG | + | chr8.2:33538637-33538656 | None:intergenic | 35.0% | |
| ! | ACAAAATATTTTCAGCCCCA+TGG | + | chr8.2:33539847-33539866 | None:intergenic | 35.0% |
| ! | ACTTTCCCAAGGATTTTATG+TGG | + | chr8.2:33537074-33537093 | None:intergenic | 35.0% |
| ! | ATAATTTCCAGTAGGGTGTT+TGG | - | chr8.2:33537186-33537205 | MS.gene056431:intron | 35.0% |
| ! | ATCTTCCATGATGGAAAACA+GGG | + | chr8.2:33539211-33539230 | None:intergenic | 35.0% |
| ! | GAGATTGGCTACTAGTTATT+TGG | - | chr8.2:33536877-33536896 | MS.gene056431:CDS | 35.0% |
| ! | GTCGTTTAGATCAGAAGTAT+CGG | + | chr8.2:33535734-33535753 | None:intergenic | 35.0% |
| ! | GTTTTCTTGACAATAGGGAT+GGG | - | chr8.2:33537571-33537590 | MS.gene056431:intron | 35.0% |
| ! | TATCTTCCATGATGGAAAAC+AGG | + | chr8.2:33539212-33539231 | None:intergenic | 35.0% |
| ! | TGTCTTGTTGTGTAATACAG+TGG | - | chr8.2:33538607-33538626 | MS.gene056431:intron | 35.0% |
| ! | TTCTCTTGTTTAATACCGTC+AGG | - | chr8.2:33539568-33539587 | MS.gene056431:intron | 35.0% |
| !! | AAATGCTAAAAAGTGCCCTT+AGG | + | chr8.2:33537398-33537417 | None:intergenic | 35.0% |
| !! | AATGCTAAAAAGTGCCCTTA+GGG | + | chr8.2:33537397-33537416 | None:intergenic | 35.0% |
| !! | TAGGGATAACTTTGTTGTTG+TGG | - | chr8.2:33536356-33536375 | MS.gene056431:CDS | 35.0% |
| !! | TCAATCATGGGTGTTATTCA+TGG | + | chr8.2:33539516-33539535 | None:intergenic | 35.0% |
| !! | TCCAGGTTAAGCCTTTATTT+TGG | - | chr8.2:33539064-33539083 | MS.gene056431:intron | 35.0% |
| !! | TTCCTGCTTTATTTGTCTGT+TGG | - | chr8.2:33539795-33539814 | MS.gene056431:intron | 35.0% |
| !!! | AAGCTGGTTTTCTTGACAAT+AGG | - | chr8.2:33537565-33537584 | MS.gene056431:intron | 35.0% |
| !!! | AGCTGGTTTTCTTGACAATA+GGG | - | chr8.2:33537566-33537585 | MS.gene056431:intron | 35.0% |
| !!! | CCAGGTTAAGCCTTTATTTT+GGG | - | chr8.2:33539065-33539084 | MS.gene056431:intron | 35.0% |
| !!! | TTGTTTTGAAATTGTGCGCA+GGG | - | chr8.2:33536038-33536057 | MS.gene056431:intron | 35.0% |
| !!! | TTTGTTTTGAAATTGTGCGC+AGG | - | chr8.2:33536037-33536056 | MS.gene056431:intron | 35.0% |
| !!! | TTTTCAGGTTTTCTTGGATG+TGG | - | chr8.2:33536720-33536739 | MS.gene056431:intron | 35.0% |
| AAACCTGTACCGAAATGAGA+GGG | - | chr8.2:33538203-33538222 | MS.gene056431:intron | 40.0% | |
| AAAGAGATCATGAGGCTTCA+AGG | + | chr8.2:33536999-33537018 | None:intergenic | 40.0% | |
| AAAGGCTCCTTAACTGACAA+AGG | + | chr8.2:33540143-33540162 | None:intergenic | 40.0% | |
| AAATCAAATGACCCATCAGG+TGG | + | chr8.2:33538927-33538946 | None:intergenic | 40.0% | |
| AATCAAATGACCCATCAGGT+GGG | + | chr8.2:33538926-33538945 | None:intergenic | 40.0% | |
| AATCTTCGCCTCGGTATATT+GGG | + | chr8.2:33536507-33536526 | None:intergenic | 40.0% | |
| AATGCTCTGCAATATTTGGC+TGG | - | chr8.2:33537537-33537556 | MS.gene056431:intron | 40.0% | |
| AATTTACACTCCTGGAGGTA+GGG | - | chr8.2:33537640-33537659 | MS.gene056431:intron | 40.0% | |
| ACAGTATAGGCTTACACCAA+TGG | + | chr8.2:33538468-33538487 | None:intergenic | 40.0% | |
| AGAAGTAAATACATACGGGG+TGG | + | chr8.2:33539286-33539305 | None:intergenic | 40.0% | |
| AGCTATTCTCCTTGAGGATA+AGG | - | chr8.2:33537708-33537727 | MS.gene056431:intron | 40.0% | |
| ATCGACGTGAGTATCAATCA+TGG | + | chr8.2:33539529-33539548 | None:intergenic | 40.0% | |
| ATCGCTTATCTTTGGACCTT+CGG | + | chr8.2:33537100-33537119 | None:intergenic | 40.0% | |
| ATTGAGGGCTGATAGATGTA+TGG | + | chr8.2:33538346-33538365 | None:intergenic | 40.0% | |
| ATTTCCTTTATCCCACCTGA+TGG | - | chr8.2:33538912-33538931 | MS.gene056431:intron | 40.0% | |
| CAAAACTGTTGATCACGGAA+AGG | + | chr8.2:33540016-33540035 | None:intergenic | 40.0% | |
| CACCAACAGACAAATAAAGC+AGG | + | chr8.2:33539800-33539819 | None:intergenic | 40.0% | |
| CACTTGTTTCAACTGCTAGA+GGG | + | chr8.2:33538073-33538092 | None:intergenic | 40.0% | |
| CATGTGTTTGTGTAAGACAC+CGG | - | chr8.2:33535900-33535919 | MS.gene056431:intron | 40.0% | |
| CATTGTAGCACCTGTTTGTT+TGG | + | chr8.2:33538305-33538324 | None:intergenic | 40.0% | |
| CCCAAAATAAAGGCTTAACC+TGG | + | chr8.2:33539068-33539087 | None:intergenic | 40.0% | |
| CGATTCGATGTAGGAAGAAA+AGG | + | chr8.2:33536181-33536200 | None:intergenic | 40.0% | |
| CTATTCTCCTTGAGGATAAG+GGG | - | chr8.2:33537710-33537729 | MS.gene056431:intron | 40.0% | |
| CTCTTCCTTCTCGATATCAA+AGG | - | chr8.2:33535504-33535523 | MS.gene056431:CDS | 40.0% | |
| GCTATTCTCCTTGAGGATAA+GGG | - | chr8.2:33537709-33537728 | MS.gene056431:intron | 40.0% | |
| GCTGCATAGGTTAATAATGG+TGG | - | chr8.2:33535938-33535957 | MS.gene056431:intron | 40.0% | |
| GGAGTCAATTTAAGGAACGT+AGG | - | chr8.2:33539145-33539164 | MS.gene056431:intron | 40.0% | |
| GGTGTAAGCCTATACTGTTA+TGG | - | chr8.2:33538470-33538489 | MS.gene056431:intron | 40.0% | |
| GTGAGATACATAACAATGGC+TGG | - | chr8.2:33540265-33540284 | MS.gene056431:CDS | 40.0% | |
| TAAGAACGCGTGATTTCATC+TGG | - | chr8.2:33535811-33535830 | MS.gene056431:intron | 40.0% | |
| TAATTTACACTCCTGGAGGT+AGG | - | chr8.2:33537639-33537658 | MS.gene056431:intron | 40.0% | |
| TATCCTCAAGGAGAATAGCT+TGG | + | chr8.2:33537708-33537727 | None:intergenic | 40.0% | |
| TATCGGATGTGTTTCAACTC+TGG | + | chr8.2:33538159-33538178 | None:intergenic | 40.0% | |
| TATGAAGAATGGATCAGGCT+TGG | - | chr8.2:33537866-33537885 | MS.gene056431:intron | 40.0% | |
| TCAAGTAGTTCATACTGCCA+AGG | + | chr8.2:33536461-33536480 | None:intergenic | 40.0% | |
| TCGACGTGAGTATCAATCAT+GGG | + | chr8.2:33539528-33539547 | None:intergenic | 40.0% | |
| TCTAAACACAAGTGCCCTAA+GGG | - | chr8.2:33537380-33537399 | MS.gene056431:intron | 40.0% | |
| TCTTCCAGTGATAACACAGT+GGG | + | chr8.2:33538509-33538528 | None:intergenic | 40.0% | |
| TGGTCTAAGCCACTAACTAA+TGG | - | chr8.2:33536691-33536710 | MS.gene056431:CDS | 40.0% | |
| TGTGCTTCCACCCAAAATAA+AGG | + | chr8.2:33539078-33539097 | None:intergenic | 40.0% | |
| TGTTGAAATAGCTCACACAC+GGG | - | chr8.2:33537150-33537169 | MS.gene056431:intron | 40.0% | |
| TTCTAAACACAAGTGCCCTA+AGG | - | chr8.2:33537379-33537398 | MS.gene056431:intron | 40.0% | |
| TTTCCTTTATCCCACCTGAT+GGG | - | chr8.2:33538913-33538932 | MS.gene056431:intron | 40.0% | |
| TTTGTCTAGTTGCTGTCATG+AGG | + | chr8.2:33536139-33536158 | None:intergenic | 40.0% | |
| ! | ACAGCATTTGTTACAGCCAT+GGG | + | chr8.2:33536584-33536603 | None:intergenic | 40.0% |
| ! | ACGTATAGGAGCTTTTCTCT+CGG | + | chr8.2:33539651-33539670 | None:intergenic | 40.0% |
| ! | ATAGGGATGGGACTTTTGTA+TGG | - | chr8.2:33537583-33537602 | MS.gene056431:intron | 40.0% |
| ! | CAAACAAACAGGTGCTACAA+TGG | - | chr8.2:33538303-33538322 | MS.gene056431:intron | 40.0% |
| ! | GGTGCTGCATAGGTTAATAA+TGG | - | chr8.2:33535935-33535954 | MS.gene056431:intron | 40.0% |
| ! | GGTTTTCTTGACAATAGGGA+TGG | - | chr8.2:33537570-33537589 | MS.gene056431:intron | 40.0% |
| ! | TACAGCATTTGTTACAGCCA+TGG | + | chr8.2:33536585-33536604 | None:intergenic | 40.0% |
| ! | TCTTCCATGATGGAAAACAG+GGG | + | chr8.2:33539210-33539229 | None:intergenic | 40.0% |
| ! | TTTTACTGTGTCCGGAATAC+AGG | - | chr8.2:33539691-33539710 | MS.gene056431:CDS | 40.0% |
| !! | ATGAGACTTTTGAGGGGAAT+TGG | - | chr8.2:33537508-33537527 | MS.gene056431:intron | 40.0% |
| !! | TATTTGGCTGGTTTACAAGC+TGG | - | chr8.2:33537549-33537568 | MS.gene056431:intron | 40.0% |
| !!! | GGTACTTCACTGTTTTAGTC+TGG | - | chr8.2:33538384-33538403 | MS.gene056431:intron | 40.0% |
| !!! | GGTTAAGCCTTTATTTTGGG+TGG | - | chr8.2:33539068-33539087 | MS.gene056431:intron | 40.0% |
| !!! | TCACTGTTTTAGTCTGGTCT+TGG | - | chr8.2:33538390-33538409 | MS.gene056431:intron | 40.0% |
| AAAGGCTCAAGGTTCACCAT+TGG | - | chr8.2:33538449-33538468 | MS.gene056431:intron | 45.0% | |
| AACCTCTTTCTCGATGAGCT+TGG | + | chr8.2:33535595-33535614 | None:intergenic | 45.0% | |
| AATTGCCACACCCACACATT+CGG | - | chr8.2:33538267-33538286 | MS.gene056431:intron | 45.0% | |
| ACGCGTGATTTCATCTGGAA+TGG | - | chr8.2:33535816-33535835 | MS.gene056431:intron | 45.0% | |
| ACGCTGAATTCTTCTGTCCT+TGG | - | chr8.2:33536441-33536460 | MS.gene056431:intron | 45.0% | |
| ATCTTCGCCTCGGTATATTG+GGG | + | chr8.2:33536506-33536525 | None:intergenic | 45.0% | |
| ATGCAACCACTCCAAATGTG+CGG | - | chr8.2:33539380-33539399 | MS.gene056431:intron | 45.0% | |
| CAAACCTGTACCGAAATGAG+AGG | - | chr8.2:33538202-33538221 | MS.gene056431:intron | 45.0% | |
| CAAGGGAAAAGCGATTGACT+TGG | - | chr8.2:33538693-33538712 | MS.gene056431:intron | 45.0% | |
| CCAAATGTGCGGACATCAAT+GGG | - | chr8.2:33539391-33539410 | MS.gene056431:intron | 45.0% | |
| CCCTTAACATGTACTCCTGA+CGG | + | chr8.2:33539586-33539605 | None:intergenic | 45.0% | |
| CTGTATCTTGGCGTAGTGAA+GGG | - | chr8.2:33536600-33536619 | MS.gene056431:intron | 45.0% | |
| GAATCTTCGCCTCGGTATAT+TGG | + | chr8.2:33536508-33536527 | None:intergenic | 45.0% | |
| GAGCTCGAAAAGAGATCATG+AGG | + | chr8.2:33537007-33537026 | None:intergenic | 45.0% | |
| GATTGGTATGTGATTGAGGC+AGG | - | chr8.2:33536293-33536312 | MS.gene056431:intron | 45.0% | |
| GCACTTGTTTCAACTGCTAG+AGG | + | chr8.2:33538074-33538093 | None:intergenic | 45.0% | |
| GGTAAAAGGGTAAAGGCTCA+AGG | - | chr8.2:33538438-33538457 | MS.gene056431:intron | 45.0% | |
| GTATGGAACTGCCAGCATAA+AGG | - | chr8.2:33537600-33537619 | MS.gene056431:intron | 45.0% | |
| GTCTTCCAGTGATAACACAG+TGG | + | chr8.2:33538510-33538529 | None:intergenic | 45.0% | |
| TATCCCTCTCATTTCGGTAC+AGG | + | chr8.2:33538209-33538228 | None:intergenic | 45.0% | |
| TATCTTAAGTCCCTACCTCC+AGG | + | chr8.2:33537653-33537672 | None:intergenic | 45.0% | |
| TCACATTCCCCTTATCCTCA+AGG | + | chr8.2:33537720-33537739 | None:intergenic | 45.0% | |
| TCCAAATGTGCGGACATCAA+TGG | - | chr8.2:33539390-33539409 | MS.gene056431:intron | 45.0% | |
| TGTCCAAGCTATTCTCCTTG+AGG | - | chr8.2:33537702-33537721 | MS.gene056431:intron | 45.0% | |
| TTCAAGGACGTGTTTGAGCA+GGG | - | chr8.2:33536957-33536976 | MS.gene056431:intron | 45.0% | |
| TTTCAAGGACGTGTTTGAGC+AGG | - | chr8.2:33536956-33536975 | MS.gene056431:intron | 45.0% | |
| ! | AAGATCTTTTCCTGGAGGCA+AGG | - | chr8.2:33539459-33539478 | MS.gene056431:CDS | 45.0% |
| ! | ACCGTCAGGAGTACATGTTA+AGG | - | chr8.2:33539582-33539601 | MS.gene056431:intron | 45.0% |
| ! | CCGTCAGGAGTACATGTTAA+GGG | - | chr8.2:33539583-33539602 | MS.gene056431:intron | 45.0% |
| ! | CGGTACAGGTTTGACTTTGT+TGG | + | chr8.2:33538195-33538214 | None:intergenic | 45.0% |
| ! | CGTATAGGAGCTTTTCTCTC+GGG | + | chr8.2:33539650-33539669 | None:intergenic | 45.0% |
| ! | GTTTCCCCTGTTTTCCATCA+TGG | - | chr8.2:33539203-33539222 | MS.gene056431:CDS | 45.0% |
| ! | TACTTTGGGGACCTTTATGC+TGG | + | chr8.2:33537614-33537633 | None:intergenic | 45.0% |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | - | chr8.2:33536723-33536742 | MS.gene056431:intron | 45.0% |
| ! | TGGCTGGAGAGTATGAGTTA+AGG | - | chr8.2:33540281-33540300 | MS.gene056431:CDS | 45.0% |
| ! | TTCCAGTAGGGTGTTTGGAA+GGG | - | chr8.2:33537191-33537210 | MS.gene056431:intron | 45.0% |
| ! | TTGATGAAGGTGTGTGCGAT+TGG | - | chr8.2:33538866-33538885 | MS.gene056431:intron | 45.0% |
| ! | TTTCCAGTAGGGTGTTTGGA+AGG | - | chr8.2:33537190-33537209 | MS.gene056431:intron | 45.0% |
| !! | CAAGTCAATCGCTTTTCCCT+TGG | + | chr8.2:33538695-33538714 | None:intergenic | 45.0% |
| !! | AAATTATATTAATTAATAGA+TGG | + | chr8.2:33539309-33539328 | None:intergenic | 5.0% |
| AACCCTTCCAAACACCCTAC+TGG | + | chr8.2:33537196-33537215 | None:intergenic | 50.0% | |
| AAGTACGCTGCCGAATGTGT+GGG | + | chr8.2:33538280-33538299 | None:intergenic | 50.0% | |
| AATACCTACCTGCCTGCTAC+CGG | - | chr8.2:33538363-33538382 | MS.gene056431:intron | 50.0% | |
| AATCGCGCCAAATGAGAACG+CGG | + | chr8.2:33535530-33535549 | None:intergenic | 50.0% | |
| ACCTTCGGAACACTTTCCCA+AGG | + | chr8.2:33537085-33537104 | None:intergenic | 50.0% | |
| AGACACCGGATATGCCTAGT+CGG | - | chr8.2:33535914-33535933 | MS.gene056431:intron | 50.0% | |
| AGTTACACAGAGACCTCCCA+TGG | - | chr8.2:33536565-33536584 | MS.gene056431:intron | 50.0% | |
| ATCGAGAAGGAAGAGAGCAG+AGG | + | chr8.2:33535499-33535518 | None:intergenic | 50.0% | |
| ATGTGTTTCAACTCTGGCCG+TGG | + | chr8.2:33538153-33538172 | None:intergenic | 50.0% | |
| CAAGCTGGGGGATGAAATGA+AGG | + | chr8.2:33537447-33537466 | None:intergenic | 50.0% | |
| CACCAAGCTCATCGAGAAAG+AGG | - | chr8.2:33535590-33535609 | MS.gene056431:intron | 50.0% | |
| CCCATTGATGTCCGCACATT+TGG | + | chr8.2:33539394-33539413 | None:intergenic | 50.0% | |
| CTCATTTGGCGCGATTATCG+TGG | - | chr8.2:33535534-33535553 | MS.gene056431:CDS | 50.0% | |
| CTCGCTAAGAATCTTCGCCT+CGG | + | chr8.2:33536516-33536535 | None:intergenic | 50.0% | |
| GACATACAGACTCAGCACAC+AGG | - | chr8.2:33538950-33538969 | MS.gene056431:intron | 50.0% | |
| GCGTACTTGGCCAAACAAAC+AGG | - | chr8.2:33538292-33538311 | MS.gene056431:intron | 50.0% | |
| GCTGTATCTTGGCGTAGTGA+AGG | - | chr8.2:33536599-33536618 | MS.gene056431:intron | 50.0% | |
| GCTTCCTCGTCTGTTATGCT+GGG | + | chr8.2:33539623-33539642 | None:intergenic | 50.0% | |
| GGCATGCCAGAGTGTAAACT+TGG | - | chr8.2:33538628-33538647 | MS.gene056431:intron | 50.0% | |
| TACAGACTCAGCACACAGGT+TGG | - | chr8.2:33538954-33538973 | MS.gene056431:intron | 50.0% | |
| TCAAAGGCCGCGTTCTCATT+TGG | - | chr8.2:33535520-33535539 | MS.gene056431:CDS | 50.0% | |
| TCTTCCCAGCATAACAGACG+AGG | - | chr8.2:33539616-33539635 | MS.gene056431:CDS | 50.0% | |
| TCTTCGCCTCGGTATATTGG+GGG | + | chr8.2:33536505-33536524 | None:intergenic | 50.0% | |
| TGACCCATCAGGTGGGATAA+AGG | + | chr8.2:33538919-33538938 | None:intergenic | 50.0% | |
| TGATGTCCGCACATTTGGAG+TGG | + | chr8.2:33539389-33539408 | None:intergenic | 50.0% | |
| TGCTTCCTCGTCTGTTATGC+TGG | + | chr8.2:33539624-33539643 | None:intergenic | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | - | chr8.2:33540243-33540262 | MS.gene056431:CDS | 50.0% | |
| TGGTTACCCCCAATATACCG+AGG | - | chr8.2:33536496-33536515 | MS.gene056431:intron | 50.0% | |
| TGTGTTTCAACTCTGGCCGT+GGG | + | chr8.2:33538152-33538171 | None:intergenic | 50.0% | |
| ! | GAAGCGTTCAGCTTCAACAG+CGG | + | chr8.2:33535568-33535587 | None:intergenic | 50.0% |
| ! | GCATTTGTTACAGCCATGGG+AGG | + | chr8.2:33536581-33536600 | None:intergenic | 50.0% |
| ! | GTGTGGGTGTGGCAATTTTG+AGG | + | chr8.2:33538264-33538283 | None:intergenic | 50.0% |
| ! | TAGCAGGCAGGTAGGTATTG+AGG | + | chr8.2:33538362-33538381 | None:intergenic | 50.0% |
| ! | TTTGGAGTGGTTGCATCAGC+AGG | + | chr8.2:33539376-33539395 | None:intergenic | 50.0% |
| !! | AACAGTGAAGTACCGGTAGC+AGG | + | chr8.2:33538378-33538397 | None:intergenic | 50.0% |
| !! | AGCAGGCAGGTAGGTATTGA+GGG | + | chr8.2:33538361-33538380 | None:intergenic | 50.0% |
| !! | GGGAAAAGCGATTGACTTGG+AGG | - | chr8.2:33538696-33538715 | MS.gene056431:intron | 50.0% |
| !! | TAACCTATGCAGCACCGACT+AGG | + | chr8.2:33535931-33535950 | None:intergenic | 50.0% |
| !! | TCCTTGGGAAAGTGTTCCGA+AGG | - | chr8.2:33537081-33537100 | MS.gene056431:CDS | 50.0% |
| AGCTCACACACGGGCAAGTT+AGG | - | chr8.2:33537159-33537178 | MS.gene056431:intron | 55.0% | |
| AGGGCCCACTGTGTTATCAC+TGG | - | chr8.2:33538502-33538521 | MS.gene056431:intron | 55.0% | |
| CAAGTACGCTGCCGAATGTG+TGG | + | chr8.2:33538281-33538300 | None:intergenic | 55.0% | |
| CACACATTCGGCAGCGTACT+TGG | - | chr8.2:33538279-33538298 | MS.gene056431:intron | 55.0% | |
| CGCGGCCTTTGATATCGAGA+AGG | + | chr8.2:33535512-33535531 | None:intergenic | 55.0% | |
| GCACAAGGTAGAGCGACCAA+GGG | - | chr8.2:33538676-33538695 | MS.gene056431:intron | 55.0% | |
| GCAGGGAGATCAACAGTCTC+AGG | - | chr8.2:33536055-33536074 | MS.gene056431:intron | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | - | chr8.2:33540242-33540261 | MS.gene056431:CDS | 55.0% | |
| TGCCAGAGTTCGACATCCCA+CGG | - | chr8.2:33538133-33538152 | MS.gene056431:intron | 55.0% | |
| !! | ATGCCTAGTCGGTGCTGCAT+AGG | - | chr8.2:33535925-33535944 | MS.gene056431:intron | 55.0% |
| !! | CAGCACCGACTAGGCATATC+CGG | + | chr8.2:33535922-33535941 | None:intergenic | 55.0% |
| GGCACAAGGTAGAGCGACCA+AGG | - | chr8.2:33538675-33538694 | MS.gene056431:intron | 60.0% | |
| GTGGTTGCATCAGCAGGCAC+AGG | + | chr8.2:33539370-33539389 | None:intergenic | 60.0% | |
| !! | AGTACCGGTAGCAGGCAGGT+AGG | + | chr8.2:33538370-33538389 | None:intergenic | 60.0% |
| !! | GTGAAGTACCGGTAGCAGGC+AGG | + | chr8.2:33538374-33538393 | None:intergenic | 60.0% |
| CGCTGCCGAATGTGTGGGTG+TGG | + | chr8.2:33538275-33538294 | None:intergenic | 65.0% | |
| GGCCGTGGGATGTCGAACTC+TGG | + | chr8.2:33538138-33538157 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 33535483 | 33540312 | 33535483 | ID=MS.gene056431 |
| chr8.2 | mRNA | 33535483 | 33540312 | 33535483 | ID=MS.gene056431.t1;Parent=MS.gene056431 |
| chr8.2 | exon | 33540184 | 33540312 | 33540184 | ID=MS.gene056431.t1.exon1;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33540184 | 33540312 | 33540184 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33539590 | 33539736 | 33539590 | ID=MS.gene056431.t1.exon2;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33539590 | 33539736 | 33539590 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33539418 | 33539480 | 33539418 | ID=MS.gene056431.t1.exon3;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33539418 | 33539480 | 33539418 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33539152 | 33539328 | 33539152 | ID=MS.gene056431.t1.exon4;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33539152 | 33539328 | 33539152 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33538965 | 33539068 | 33538965 | ID=MS.gene056431.t1.exon5;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33538965 | 33539068 | 33538965 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33537061 | 33537168 | 33537061 | ID=MS.gene056431.t1.exon6;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33537061 | 33537168 | 33537061 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33536824 | 33536920 | 33536824 | ID=MS.gene056431.t1.exon7;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33536824 | 33536920 | 33536824 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33536629 | 33536726 | 33536629 | ID=MS.gene056431.t1.exon8;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33536629 | 33536726 | 33536629 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33536315 | 33536456 | 33536315 | ID=MS.gene056431.t1.exon9;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33536315 | 33536456 | 33536315 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33536083 | 33536205 | 33536083 | ID=MS.gene056431.t1.exon10;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33536083 | 33536205 | 33536083 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| chr8.2 | exon | 33535483 | 33535581 | 33535483 | ID=MS.gene056431.t1.exon11;Parent=MS.gene056431.t1 |
| chr8.2 | CDS | 33535483 | 33535581 | 33535483 | ID=cds.MS.gene056431.t1;Parent=MS.gene056431.t1 |
| Gene Sequence |
| Protein sequence |
