AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76272

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76272.t1 MTR_1g111350 94.956 456 20 1 15 470 15 467 0.0 841
MS.gene76272.t1 MTR_6g085010 55.876 485 190 7 5 470 12 491 1.58e-167 481
MS.gene76272.t1 MTR_7g117430 55.854 410 169 6 72 470 76 484 7.47e-141 413
MS.gene76272.t1 MTR_1g115210 45.140 463 239 6 21 470 26 486 1.03e-138 407
MS.gene76272.t1 MTR_1g039270 45.578 441 226 5 44 470 29 469 3.55e-127 377
MS.gene76272.t1 MTR_8g103880 43.021 437 217 7 31 463 40 448 1.69e-112 339
MS.gene76272.t1 MTR_3g097150 40.235 425 230 11 67 470 25 446 3.74e-87 274
MS.gene76272.t1 MTR_3g046300 38.520 392 201 10 111 470 75 458 5.75e-74 240
MS.gene76272.t1 MTR_5g091130 38.583 381 202 9 119 470 176 553 2.19e-73 241
MS.gene76272.t1 MTR_4g007740 34.834 422 240 10 75 470 65 477 1.59e-67 224
MS.gene76272.t1 MTR_3g053710 36.029 408 221 12 83 470 79 466 5.64e-67 222
MS.gene76272.t1 MTR_2g028190 33.800 429 245 14 73 470 31 451 1.36e-63 213
MS.gene76272.t1 MTR_5g080890 36.620 355 200 12 133 470 85 431 7.27e-61 205
MS.gene76272.t1 MTR_3g053980 35.644 404 223 10 97 470 89 485 3.75e-60 204
MS.gene76272.t1 MTR_5g080960 36.901 355 199 12 133 470 85 431 4.93e-60 203
MS.gene76272.t1 MTR_5g044770 36.056 355 199 13 133 470 85 428 1.60e-59 201
MS.gene76272.t1 MTR_8g096990 31.100 418 247 13 85 470 21 429 5.13e-58 197
MS.gene76272.t1 MTR_8g038280 34.626 361 201 14 133 470 85 433 1.88e-57 196
MS.gene76272.t1 MTR_0036s0110 33.175 422 221 19 79 470 50 440 6.77e-56 192
MS.gene76272.t1 MTR_0036s0070 33.333 411 237 15 77 470 34 424 8.75e-55 189
MS.gene76272.t1 MTR_5g008110 36.313 358 198 13 133 470 66 413 9.36e-55 188
MS.gene76272.t1 MTR_5g008150 35.854 357 202 11 133 470 62 410 1.96e-53 185
MS.gene76272.t1 MTR_5g038360 32.598 408 248 14 83 470 34 434 1.21e-52 183
MS.gene76272.t1 MTR_2g059490 35.097 359 203 14 134 470 58 408 1.26e-51 181
MS.gene76272.t1 MTR_2g059460 34.831 356 203 12 134 470 59 404 1.99e-51 179
MS.gene76272.t1 MTR_5g008070 35.593 354 205 10 132 470 79 424 1.45e-50 177
MS.gene76272.t1 MTR_3g028120 30.193 414 260 12 77 470 32 436 2.17e-50 177
MS.gene76272.t1 MTR_2g055840 32.961 358 212 9 139 470 18 373 6.28e-50 174
MS.gene76272.t1 MTR_8g038250 34.648 355 189 13 133 470 85 413 1.06e-49 175
MS.gene76272.t1 MTR_0024s0040 32.527 372 228 11 115 470 44 408 4.83e-47 168
MS.gene76272.t1 MTR_0036s0050 32.553 427 228 17 77 470 34 433 5.13e-47 168
MS.gene76272.t1 MTR_8g038310 29.310 406 256 12 73 470 29 411 5.59e-46 165
MS.gene76272.t1 MTR_5g044570 33.711 353 193 13 130 470 86 409 9.06e-46 164
MS.gene76272.t1 MTR_6g090290 34.174 357 209 11 133 470 85 434 6.81e-45 162
MS.gene76272.t1 MTR_2g067830 29.851 402 231 16 97 470 26 404 1.41e-43 158
MS.gene76272.t1 MTR_3g014290 33.058 363 214 9 123 470 68 416 1.70e-42 155
MS.gene76272.t1 MTR_1g037630 33.333 363 213 9 123 470 80 428 1.98e-42 155
MS.gene76272.t1 MTR_8g039540 32.951 349 215 10 132 470 94 433 6.74e-42 154
MS.gene76272.t1 MTR_4g109760 33.711 353 205 13 135 470 56 396 1.60e-40 150
MS.gene76272.t1 MTR_3g100500 32.405 395 242 10 89 470 55 437 2.30e-38 145
MS.gene76272.t1 MTR_7g105850 29.820 389 218 13 129 470 85 465 7.48e-38 144
MS.gene76272.t1 MTR_2g070430 28.864 440 264 14 70 469 22 452 8.40e-38 144
MS.gene76272.t1 MTR_1g060750 29.208 404 223 18 93 470 8 374 1.04e-37 142
MS.gene76272.t1 MTR_2g063110 27.602 442 248 17 97 470 71 508 3.68e-37 143
MS.gene76272.t1 MTR_5g077850 31.268 355 214 12 141 470 88 437 4.01e-37 141
MS.gene76272.t1 MTR_2g105300 30.588 340 197 15 153 467 54 379 4.09e-37 140
MS.gene76272.t1 MTR_3g068000 31.551 374 204 15 139 470 78 441 7.32e-37 141
MS.gene76272.t1 MTR_4g045857 34.800 250 137 9 115 344 43 286 1.06e-35 134
MS.gene76272.t1 MTR_6g088760 28.680 394 230 15 85 437 21 404 3.14e-35 137
MS.gene76272.t1 MTR_5g012490 29.592 392 204 14 144 470 85 469 4.02e-35 137
MS.gene76272.t1 MTR_3g065160 30.748 361 208 14 139 470 79 426 6.31e-35 135
MS.gene76272.t1 MTR_4g100990 28.640 419 220 16 119 470 64 470 6.80e-34 133
MS.gene76272.t1 MTR_7g062360 30.997 371 208 16 139 470 64 425 1.44e-32 129
MS.gene76272.t1 MTR_4g056420 28.495 372 223 14 132 470 75 436 8.38e-31 124
MS.gene76272.t1 MTR_5g077920 29.949 394 242 12 106 470 38 426 5.82e-30 121
MS.gene76272.t1 MTR_7g102750 26.761 426 269 13 75 470 28 440 4.41e-29 120
MS.gene76272.t1 MTR_5g008090 33.224 304 170 13 189 470 20 312 2.62e-28 114
MS.gene76272.t1 MTR_2g084550 28.763 372 221 14 133 470 76 437 9.71e-27 113
MS.gene76272.t1 MTR_1g078240 26.579 380 234 14 126 470 61 430 1.19e-26 112
MS.gene76272.t1 MTR_7g080230 27.937 383 223 17 126 470 63 430 1.24e-26 112
MS.gene76272.t1 MTR_1g078240 26.579 380 233 15 126 470 61 429 1.79e-25 109
MS.gene76272.t1 MTR_5g016260 27.451 357 230 11 132 470 86 431 2.09e-25 109
MS.gene76272.t1 MTR_4g095270 28.889 360 221 14 132 470 78 423 2.53e-25 109
MS.gene76272.t1 MTR_4g095270 28.889 360 221 14 132 470 78 423 2.62e-25 109
MS.gene76272.t1 MTR_5g016260 27.451 357 230 11 132 470 86 431 3.02e-25 109
MS.gene76272.t1 MTR_7g102750 25.935 401 254 12 75 445 28 415 3.09e-25 108
MS.gene76272.t1 MTR_1g061940 26.613 372 234 12 131 470 80 444 6.76e-25 107
MS.gene76272.t1 MTR_8g075090 28.184 369 210 17 135 470 113 459 7.47e-24 104
MS.gene76272.t1 MTR_8g075090 28.184 369 210 17 135 470 113 459 9.10e-24 103
MS.gene76272.t1 MTR_8g075010 26.486 370 217 12 135 470 101 449 1.37e-23 103
MS.gene76272.t1 MTR_5g022880 27.056 377 206 19 135 470 113 461 4.64e-22 99.4
MS.gene76272.t1 MTR_1g078240 27.469 324 198 12 126 421 61 375 2.07e-21 96.3
MS.gene76272.t1 MTR_7g021510 24.611 386 234 14 126 470 64 433 2.46e-21 97.1
MS.gene76272.t1 MTR_6g084710 26.316 380 235 17 125 470 182 550 6.50e-21 95.9
MS.gene76272.t1 MTR_8g075090 29.293 297 161 14 135 401 113 390 2.01e-20 94.0
MS.gene76272.t1 MTR_4g023650 27.273 385 224 18 125 470 52 419 9.30e-20 91.7
MS.gene76272.t1 MTR_1g072450 25.672 409 230 19 113 466 26 415 3.35e-19 90.1
MS.gene76272.t1 MTR_2g022450 23.393 389 231 12 131 466 37 411 4.07e-19 89.7
MS.gene76272.t1 MTR_3g087780 28.226 372 210 17 135 470 100 450 1.03e-18 89.4
MS.gene76272.t1 MTR_6g084710 28.794 257 155 11 125 363 182 428 1.21e-18 89.0
MS.gene76272.t1 MTR_5g061690 27.624 362 222 14 135 470 102 449 1.65e-18 88.6
MS.gene76272.t1 MTR_1g029810 27.100 369 223 17 133 470 56 409 2.62e-18 87.4
MS.gene76272.t1 MTR_1g029810 27.100 369 223 17 133 470 56 409 5.08e-18 86.7
MS.gene76272.t1 MTR_1g072380 23.150 419 239 16 111 466 34 432 1.36e-17 85.5
MS.gene76272.t1 MTR_1g072420 24.697 413 230 18 113 466 26 416 1.27e-16 82.4
MS.gene76272.t1 MTR_2g022320 24.611 386 220 13 135 466 37 405 1.46e-16 82.0
MS.gene76272.t1 MTR_4g023630 25.393 382 235 17 125 470 52 419 1.70e-16 81.6
MS.gene76272.t1 MTR_5g080330 27.114 343 207 15 150 470 1 322 5.11e-15 77.4
MS.gene76272.t1 MTR_2g022380 25.000 380 210 15 143 466 49 409 1.22e-14 76.3
MS.gene76272.t1 MTR_2g022430 24.297 391 217 16 135 466 40 410 5.43e-14 73.9
MS.gene76272.t1 MTR_7g080230 26.829 328 192 16 176 470 48 360 1.87e-13 72.4
MS.gene76272.t1 MTR_2g022370 23.896 385 221 15 135 466 40 405 1.98e-13 72.4
MS.gene76272.t1 MTR_3g087780 27.469 324 181 14 177 470 9 308 2.97e-13 71.6
MS.gene76272.t1 MTR_2g022480 23.810 378 216 17 135 457 50 410 2.95e-11 65.5
MS.gene76272.t1 MTR_3g006820 22.249 418 258 17 91 470 24 412 3.32e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76272.t1 AT1G25510 61.915 470 150 5 22 470 22 483 0.0 576
MS.gene76272.t1 AT3G18490 54.620 487 194 7 10 470 15 500 5.64e-176 503
MS.gene76272.t1 AT1G01300 55.072 414 169 7 73 470 72 484 3.14e-136 401
MS.gene76272.t1 AT3G61820 54.135 399 158 9 96 470 86 483 2.75e-127 378
MS.gene76272.t1 AT3G20015 48.077 416 204 3 67 470 55 470 8.52e-122 364
MS.gene76272.t1 AT5G10770 37.560 418 221 11 86 470 63 473 1.86e-78 252
MS.gene76272.t1 AT2G03200 38.251 366 204 10 124 470 96 458 7.31e-73 237
MS.gene76272.t1 AT3G59080 35.142 424 240 11 77 470 114 532 2.80e-69 230
MS.gene76272.t1 AT5G10760 39.216 408 225 11 75 470 68 464 4.02e-69 228
MS.gene76272.t1 AT2G42980 34.430 456 256 13 51 470 76 524 2.36e-67 225
MS.gene76272.t1 AT3G59080 33.732 418 218 10 77 470 114 496 4.61e-60 205
MS.gene76272.t1 AT3G25700 32.564 433 243 15 81 470 23 449 5.88e-58 198
MS.gene76272.t1 AT5G33340 36.816 402 224 16 90 470 42 434 2.29e-56 193
MS.gene76272.t1 AT1G79720 31.929 451 251 13 63 470 45 482 1.20e-55 192
MS.gene76272.t1 AT1G64830 35.775 355 201 12 133 470 84 428 4.78e-55 190
MS.gene76272.t1 AT3G54400 35.246 366 213 12 118 470 70 424 2.36e-54 187
MS.gene76272.t1 AT1G09750 32.337 368 228 11 118 470 87 448 3.95e-46 166
MS.gene76272.t1 AT1G31450 32.949 434 231 19 84 470 21 441 4.01e-46 166
MS.gene76272.t1 AT2G35615 31.954 435 243 16 82 470 16 443 1.68e-45 164
MS.gene76272.t1 AT2G28040 31.897 348 205 8 134 470 55 381 3.57e-43 157
MS.gene76272.t1 AT2G28040 31.831 355 196 10 134 470 64 390 4.74e-43 157
MS.gene76272.t1 AT2G28010 29.830 352 206 8 135 470 65 391 1.78e-42 155
MS.gene76272.t1 AT5G07030 28.049 410 249 12 84 470 68 454 4.91e-41 152
MS.gene76272.t1 AT3G12700 29.075 454 276 16 54 470 16 460 2.31e-39 148
MS.gene76272.t1 AT2G28220 30.000 350 212 9 135 470 67 397 4.33e-39 146
MS.gene76272.t1 AT2G28225 30.199 351 210 9 135 470 67 397 8.99e-39 145
MS.gene76272.t1 AT3G52500 28.604 444 257 15 73 470 38 467 1.70e-38 146
MS.gene76272.t1 AT2G28030 30.878 353 201 12 135 470 61 387 1.80e-38 144
MS.gene76272.t1 AT4G30030 30.398 352 219 13 135 470 78 419 1.50e-37 142
MS.gene76272.t1 AT3G02740 27.211 441 264 15 62 470 24 439 4.64e-37 142
MS.gene76272.t1 AT3G02740 29.348 368 215 14 135 470 10 364 2.26e-36 139
MS.gene76272.t1 AT5G37540 32.123 358 210 13 141 470 86 438 1.12e-34 135
MS.gene76272.t1 AT5G36260 27.568 370 224 14 133 470 76 433 1.91e-34 135
MS.gene76272.t1 AT2G39710 29.459 370 211 14 139 468 69 428 2.22e-34 134
MS.gene76272.t1 AT4G30040 30.966 352 213 13 135 465 85 427 6.55e-34 132
MS.gene76272.t1 AT2G23945 26.824 425 248 18 71 458 38 436 7.87e-34 132
MS.gene76272.t1 AT5G02190 30.352 369 207 15 144 470 82 442 2.29e-31 125
MS.gene76272.t1 AT1G66180 30.110 362 212 14 139 470 76 426 7.50e-31 124
MS.gene76272.t1 AT5G43100 27.577 359 226 12 132 470 73 417 8.79e-31 125
MS.gene76272.t1 AT5G43100 27.577 359 226 12 132 470 73 417 1.06e-30 124
MS.gene76272.t1 AT2G36670 27.202 386 244 13 114 470 85 462 1.09e-29 122
MS.gene76272.t1 AT2G36670 27.520 367 230 12 133 470 98 457 1.12e-29 121
MS.gene76272.t1 AT2G36670 27.397 365 229 12 135 470 34 391 2.64e-29 119
MS.gene76272.t1 AT2G36670 27.397 365 229 12 135 470 34 391 2.64e-29 119
MS.gene76272.t1 AT1G65240 26.216 370 226 16 133 470 72 426 2.25e-28 117
MS.gene76272.t1 AT5G45120 26.866 402 222 15 135 470 83 478 1.68e-27 115
MS.gene76272.t1 AT3G50050 27.654 358 229 11 132 470 90 436 3.63e-27 115
MS.gene76272.t1 AT1G05840 28.117 377 216 15 133 470 78 438 1.07e-26 112
MS.gene76272.t1 AT5G22850 26.812 414 254 16 92 470 41 440 3.09e-26 111
MS.gene76272.t1 AT2G17760 28.022 364 216 15 135 470 104 449 2.40e-25 109
MS.gene76272.t1 AT3G51330 26.575 365 226 14 135 470 102 453 1.02e-24 106
MS.gene76272.t1 AT4G12920 26.525 377 229 12 115 470 38 387 1.12e-24 105
MS.gene76272.t1 AT3G51330 26.575 365 226 14 135 470 102 453 1.36e-24 107
MS.gene76272.t1 AT1G08210 26.036 507 291 23 25 470 5 488 8.28e-24 104
MS.gene76272.t1 AT1G08210 25.911 494 288 22 32 470 4 474 3.03e-23 103
MS.gene76272.t1 AT1G08210 26.735 389 236 16 114 470 69 440 4.06e-23 102
MS.gene76272.t1 AT1G77480 26.440 382 226 17 125 470 57 419 1.45e-22 100
MS.gene76272.t1 AT1G77480 26.440 382 226 17 125 470 57 419 2.30e-22 100
MS.gene76272.t1 AT3G51350 26.027 365 227 13 135 470 102 452 3.99e-22 99.8
MS.gene76272.t1 AT4G33490 26.494 385 221 18 125 470 50 411 6.10e-22 98.2
MS.gene76272.t1 AT3G51340 25.549 364 224 14 135 470 103 447 2.34e-21 97.4
MS.gene76272.t1 AT3G25700 26.948 308 162 11 81 330 23 325 2.67e-21 95.5
MS.gene76272.t1 AT3G25700 36.296 135 77 6 342 470 216 347 6.21e-13 70.5
MS.gene76272.t1 AT3G51330 26.686 341 208 14 135 446 102 429 6.64e-21 95.5
MS.gene76272.t1 AT1G08210 27.557 352 207 15 114 434 69 403 2.12e-20 94.4
MS.gene76272.t1 AT3G42550 25.000 352 214 11 132 470 75 389 3.13e-20 93.2
MS.gene76272.t1 AT4G35880 24.377 361 232 11 135 470 107 451 1.60e-19 91.7
MS.gene76272.t1 AT4G16563 27.889 398 202 16 152 470 100 491 1.36e-18 88.6
MS.gene76272.t1 AT4G33490 28.920 287 156 14 125 385 47 311 1.60e-18 87.8
MS.gene76272.t1 AT5G10080 25.067 375 221 14 135 470 100 453 2.25e-18 88.2
MS.gene76272.t1 AT1G49050 22.400 375 243 18 135 470 30 395 3.90e-18 86.7
MS.gene76272.t1 AT3G51340 25.085 295 181 10 135 403 103 383 9.73e-17 82.4
MS.gene76272.t1 AT3G51340 23.592 373 232 14 135 470 103 459 1.76e-16 82.4
MS.gene76272.t1 AT3G51360 23.973 438 281 16 67 470 26 445 4.13e-16 81.3
MS.gene76272.t1 AT3G51360 23.973 438 281 16 67 470 16 435 5.33e-16 80.9
MS.gene76272.t1 AT3G51340 25.524 286 173 10 135 394 103 374 6.18e-16 79.7
MS.gene76272.t1 AT3G51360 24.309 362 233 13 135 470 5 351 3.01e-15 77.8
MS.gene76272.t1 AT5G48430 32.121 165 104 4 306 466 229 389 5.09e-15 77.0
MS.gene76272.t1 AT3G51360 24.455 413 260 16 67 445 26 420 6.08e-14 73.9
MS.gene76272.t1 AT3G51360 24.455 413 260 16 67 445 16 410 6.34e-14 73.9
MS.gene76272.t1 AT3G51360 24.800 375 233 14 67 410 26 382 9.89e-14 73.2
MS.gene76272.t1 AT3G51360 24.800 375 233 14 67 410 16 372 1.05e-13 73.2
MS.gene76272.t1 AT3G51360 24.620 329 201 12 67 366 26 336 5.94e-11 64.3

Find 128 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACACAGAGAAACTTTC+TGG 0.161885 1.1:-78601458 MS.gene76272:CDS
TGATGCAGTTGGCTCGAAAA+TGG 0.248018 1.1:+78601277 None:intergenic
GTTGCTGTTGTTTAAAGTTT+TGG 0.252744 1.1:+78601651 None:intergenic
TTGATTTAACTTAGTTGTTA+TGG 0.270458 1.1:+78601484 None:intergenic
TTGACTTGTTCCGGAGATAA+TGG 0.270765 1.1:+78601433 None:intergenic
TGGCTCACCGATTCCGATTC+TGG 0.285369 1.1:+78601391 None:intergenic
GGCTTGTTCGTTGGTGCAGC+TGG 0.291445 1.1:-78601056 MS.gene76272:CDS
GCAATTAATTAGCAACTGTT+AGG 0.292112 1.1:+78600402 None:intergenic
AGTTACCATCGGCGTTAATA+AGG 0.302292 1.1:-78601117 MS.gene76272:CDS
AACATCAAGTAGTGTGGTTT+TGG 0.306517 1.1:+78601715 None:intergenic
ATCACTTCTTTGTCGATTAT+CGG 0.311520 1.1:-78600489 MS.gene76272:CDS
GTTGGTGCAGCTGGCTTAAT+CGG 0.352535 1.1:-78601047 MS.gene76272:CDS
CCGACGGTGGCGTTTCATTT+CGG 0.354586 1.1:-78600600 MS.gene76272:CDS
GACCTTGCAAATTCATTAGT+TGG 0.361959 1.1:-78600432 MS.gene76272:CDS
GGAGGGATTATTGTGGATTC+CGG 0.378793 1.1:-78600768 MS.gene76272:CDS
ATGTTCCGAGAATGTGCTAA+TGG 0.381944 1.1:+78601749 None:intergenic
GCCGCTACCTTGACTTGTTC+CGG 0.382831 1.1:+78601424 None:intergenic
GTTCGTGATGCGTTTGTTAA+GGG 0.397061 1.1:-78600705 MS.gene76272:CDS
GGCTGAGTCGCGGTCGAGTC+GGG 0.408483 1.1:+78601517 None:intergenic
CGGCGAGTTGCTTGCAATAC+CGG 0.408895 1.1:-78600823 MS.gene76272:CDS
TGACTTGTTCCGGAGATAAT+GGG 0.411902 1.1:+78601434 None:intergenic
ATCGGCTTGGCGGTAGCAAT+CGG 0.415933 1.1:+78601301 None:intergenic
TACCATTGCGACACTGAGAT+TGG 0.416758 1.1:+78601204 None:intergenic
GGTTCGTGATGCGTTTGTTA+AGG 0.425062 1.1:-78600706 MS.gene76272:CDS
TCACTTCTTTGTCGATTATC+GGG 0.427363 1.1:-78600488 MS.gene76272:CDS
GAAAATGAAGAGGATGAAGT+TGG 0.428777 1.1:+78601784 None:intergenic
ACGCCGTTACCGCGCCGTTA+CGG 0.430716 1.1:-78600902 MS.gene76272:CDS
TTTCGGAGAAGGGAAAGTTT+TGG 0.431549 1.1:-78600583 MS.gene76272:CDS
TGTTCCGAGAATGTGCTAAT+GGG 0.432218 1.1:+78601750 None:intergenic
TTGGCGGTAGCAATCGGCGC+AGG 0.438339 1.1:+78601307 None:intergenic
ACACTGGAAGCGACATAAGC+TGG 0.442713 1.1:-78601343 MS.gene76272:CDS
GATGCAGTTGGCTCGAAAAT+GGG 0.447920 1.1:+78601278 None:intergenic
CAATTAATTAGCAACTGTTA+GGG 0.451342 1.1:+78600403 None:intergenic
TTACCTGGTACCGGTTGATT+CGG 0.452296 1.1:-78600544 MS.gene76272:CDS
TTTCCCCATTAGCACATTCT+CGG 0.461537 1.1:-78601754 MS.gene76272:CDS
GGCTTAATCGGCTTAGGCGG+TGG 0.470335 1.1:-78601035 MS.gene76272:CDS
TGTAATCAGCATGTGAAGAA+AGG 0.480027 1.1:+78601555 None:intergenic
GTTACGGCGTAATCCGCAAT+TGG 0.482972 1.1:-78600886 MS.gene76272:CDS
GGGCTGAGTCGCGGTCGAGT+CGG 0.486283 1.1:+78601516 None:intergenic
GCAGCTGGCTTAATCGGCTT+AGG 0.488301 1.1:-78601041 MS.gene76272:CDS
GGCGAGTATTTCTCCAGAAT+CGG 0.492819 1.1:-78601404 MS.gene76272:CDS
CTGGTACCGGTTGATTCGGT+AGG 0.494194 1.1:-78600540 MS.gene76272:CDS
GAGGTGGATTCCGCAGGGAA+TGG 0.502790 1.1:-78600789 MS.gene76272:CDS
GTAATCAGCATGTGAAGAAA+GGG 0.507550 1.1:+78601556 None:intergenic
TGGCGTTTCATTTCGGAGAA+GGG 0.507830 1.1:-78600593 MS.gene76272:CDS
TATTACTATGTGGGACTGGT+AGG 0.508043 1.1:-78600858 MS.gene76272:CDS
GCATACATGGTTCTCGACAC+TGG 0.512255 1.1:-78601359 MS.gene76272:CDS
GTGGCGTTTCATTTCGGAGA+AGG 0.515188 1.1:-78600594 MS.gene76272:CDS
AAAGTCCCTACCGAATCAAC+CGG 0.525956 1.1:+78600534 None:intergenic
CTTTCTGGACCCATTATCTC+CGG 0.526305 1.1:-78601443 MS.gene76272:CDS
AAGGTTAAGAATGTAGCGCT+AGG 0.528751 1.1:-78601098 MS.gene76272:CDS
CAACCGTGTCACCGCCGTGC+CGG 0.529136 1.1:+78600749 None:intergenic
TATCAAGTCTCCTACGGTGA+TGG 0.529585 1.1:-78601173 MS.gene76272:CDS
CTTAACCTTATTAACGCCGA+TGG 0.530526 1.1:+78601112 None:intergenic
GGCGAAGAATTACCTGGTAC+CGG 0.532948 1.1:-78600553 MS.gene76272:CDS
AGTGGACCGTGATTCTGACT+TGG 0.537420 1.1:-78600961 MS.gene76272:CDS
CGAAAATGGGATCGGCTTGG+CGG 0.539880 1.1:+78601291 None:intergenic
ATCGACAAAGAAGTGATCGT+TGG 0.539947 1.1:+78600495 None:intergenic
TCCACCTCAAAACTCGTCTC+CGG 0.540119 1.1:+78600804 None:intergenic
AGTTGTTATGGATTTGACTC+GGG 0.540361 1.1:+78601496 None:intergenic
CTACCGAATCAACCGGTACC+AGG 0.541898 1.1:+78600541 None:intergenic
TGGCGGTAGCAATCGGCGCA+GGG 0.543315 1.1:+78601308 None:intergenic
AACGACACGTCATCCGTCGC+GGG 0.546298 1.1:+78600669 None:intergenic
GACGTCGAATTGAGCTGTGC+CGG 0.546577 1.1:+78600999 None:intergenic
TTCGTGATGCGTTTGTTAAG+GGG 0.547844 1.1:-78600704 MS.gene76272:CDS
GTGGATTCCGCAGGGAATGG+AGG 0.549783 1.1:-78600786 MS.gene76272:CDS
ACGCCGTAACGGCGCGGTAA+CGG 0.550364 1.1:+78600899 None:intergenic
GTAACGGCGTCACGAGAAAA+CGG 0.553971 1.1:+78600915 None:intergenic
AGCTGTGCCGGAAAAGAAAG+TGG 0.554624 1.1:+78601011 None:intergenic
AAGAATGTAGCGCTAGGGTG+TGG 0.556353 1.1:-78601092 MS.gene76272:CDS
CACTGGAAGCGACATAAGCT+GGG 0.556372 1.1:-78601342 MS.gene76272:CDS
ATTCCGGCACGGCGGTGACA+CGG 0.556428 1.1:-78600752 MS.gene76272:CDS
TATTTCTCCAGAATCGGAAT+CGG 0.558867 1.1:-78601398 MS.gene76272:CDS
AACAACGAAGGCTTGTTCGT+TGG 0.564849 1.1:-78601065 MS.gene76272:CDS
TAGTTGTTATGGATTTGACT+CGG 0.565798 1.1:+78601495 None:intergenic
TGGATTCCGCAGGGAATGGA+GGG 0.565973 1.1:-78600785 MS.gene76272:CDS
GTCAAGATATTTGCATTGAG+CGG 0.567683 1.1:+78601226 None:intergenic
GCCACCGAGTCAAGCATACA+TGG 0.568072 1.1:-78601372 MS.gene76272:CDS
CACGTATTACTATGTGGGAC+TGG 0.571523 1.1:-78600862 MS.gene76272:CDS
TTGGACACGTATTACTATGT+GGG 0.577629 1.1:-78600867 MS.gene76272:CDS
GCAGAGCGATGTTTATAATG+TGG 0.578021 1.1:-78600727 MS.gene76272:CDS
GACAAAGGATTTGCCCGCGA+CGG 0.579763 1.1:-78600682 MS.gene76272:CDS
GACCAATCTCAGTGTCGCAA+TGG 0.580078 1.1:-78601206 MS.gene76272:CDS
GCTCGAAAATGGGATCGGCT+TGG 0.582434 1.1:+78601288 None:intergenic
ATCGGGAATATTCAACAGCA+AGG 0.582778 1.1:-78600471 MS.gene76272:CDS
GCTGGCTTAATCGGCTTAGG+CGG 0.584430 1.1:-78601038 MS.gene76272:CDS
ATTGGACACGTATTACTATG+TGG 0.586834 1.1:-78600868 MS.gene76272:CDS
TAGTAATACGTGTCCAATTG+CGG 0.587592 1.1:+78600873 None:intergenic
ATCCAACTAATGAATTTGCA+AGG 0.593800 1.1:+78600430 None:intergenic
ATTATCTCCGGAACAAGTCA+AGG 0.596309 1.1:-78601431 MS.gene76272:CDS
TGGTACCGGTTGATTCGGTA+GGG 0.596750 1.1:-78600539 MS.gene76272:CDS
CTGGTAGGGATAAGCGTCGG+CGG 0.597239 1.1:-78600843 MS.gene76272:CDS
TGTCTCTATCAAGTCTCCTA+CGG 0.597378 1.1:-78601179 MS.gene76272:CDS
TGCGTTTGTTAAGGGGACAA+AGG 0.599551 1.1:-78600697 MS.gene76272:CDS
AACGCCGATGGTAACTGTCT+CGG 0.600797 1.1:+78601124 None:intergenic
ATTACTATGTGGGACTGGTA+GGG 0.607196 1.1:-78600857 MS.gene76272:CDS
TCCGGAACAAGTCAAGGTAG+CGG 0.616809 1.1:-78601425 MS.gene76272:CDS
TGTGTATGAGCCATCACCGT+AGG 0.617012 1.1:+78601163 None:intergenic
ACCATGTATGCTTGACTCGG+TGG 0.621193 1.1:+78601371 None:intergenic
ATTTGACTCGGGCTGAGTCG+CGG 0.623914 1.1:+78601507 None:intergenic
GACAAGCGTGGAAGTTCCGA+CGG 0.625543 1.1:-78600616 MS.gene76272:CDS
AGGTTAAGAATGTAGCGCTA+GGG 0.626074 1.1:-78601097 MS.gene76272:CDS
AATTAATTAGCAACTGTTAG+GGG 0.626928 1.1:+78600404 None:intergenic
GGTACCAGGTAATTCTTCGC+CGG 0.631903 1.1:+78600555 None:intergenic
GTTCCGAGAATGTGCTAATG+GGG 0.633466 1.1:+78601751 None:intergenic
AGTTGGCTCGAAAATGGGAT+CGG 0.634624 1.1:+78601283 None:intergenic
CAACGACACGTCATCCGTCG+CGG 0.637283 1.1:+78600668 None:intergenic
CCGAAATGAAACGCCACCGT+CGG 0.637864 1.1:+78600600 None:intergenic
TCGGGAATATTCAACAGCAA+GGG 0.638017 1.1:-78600470 MS.gene76272:CDS
GTGTAGGAAGCTGATGCAGT+TGG 0.639824 1.1:+78601266 None:intergenic
AAACCCATAAGAAAATGAAG+AGG 0.641768 1.1:+78601774 None:intergenic
TTTGTCGTCGAAGACAAGCG+TGG 0.646119 1.1:-78600628 MS.gene76272:CDS
GATTATTGTGGATTCCGGCA+CGG 0.647183 1.1:-78600763 MS.gene76272:CDS
GCTTCCGGCGAAGAATTACC+TGG 0.648010 1.1:-78600559 MS.gene76272:CDS
AATTGCGGATTACGCCGTAA+CGG 0.648916 1.1:+78600888 None:intergenic
GGTGATGGCTCATACACAGT+AGG 0.649403 1.1:-78601158 MS.gene76272:CDS
AGAACCATGTATGCTTGACT+CGG 0.649421 1.1:+78601368 None:intergenic
AGCAGAAACATCAAGTAGTG+TGG 0.652436 1.1:+78601709 None:intergenic
AGGGAATGGAGGGATTATTG+TGG 0.663130 1.1:-78600775 MS.gene76272:CDS
GTTACCGAGACAGTTACCAT+CGG 0.672706 1.1:-78601128 MS.gene76272:CDS
TTGAAACCAAGTCAGAATCA+CGG 0.674620 1.1:+78600955 None:intergenic
TTCACAAGAGAGCTGCGTGT+AGG 0.678677 1.1:+78601250 None:intergenic
AAGCGTGGAAGTTCCGACGG+TGG 0.688631 1.1:-78600613 MS.gene76272:CDS
CGGATTACGCCGTAACGGCG+CGG 0.703290 1.1:+78600893 None:intergenic
GGACTGGTAGGGATAAGCGT+CGG 0.705431 1.1:-78600846 MS.gene76272:CDS
GGGTGTGGTCATAACAACGA+AGG 0.707295 1.1:-78601077 MS.gene76272:CDS
TATTGTGGATTCCGGCACGG+CGG 0.740065 1.1:-78600760 MS.gene76272:CDS
AATAATCCCTCCATTCCCTG+CGG 0.750759 1.1:+78600779 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTGATATGTTTTTTGAA+TGG + chr1.1:78600528-78600547 None:intergenic 20.0%
!!! TTGATTTAACTTAGTTGTTA+TGG + chr1.1:78600729-78600748 None:intergenic 20.0%
AAACCCATAAGAAAATGAAG+AGG + chr1.1:78600439-78600458 None:intergenic 30.0%
ATCCAACTAATGAATTTGCA+AGG + chr1.1:78601783-78601802 None:intergenic 30.0%
TAGTTGTTATGGATTTGACT+CGG + chr1.1:78600718-78600737 None:intergenic 30.0%
! ATCACTTCTTTGTCGATTAT+CGG - chr1.1:78601721-78601740 MS.gene76272:CDS 30.0%
! CATCCTCTTCATTTTCTTAT+GGG - chr1.1:78600433-78600452 MS.gene76272:CDS 30.0%
! TCATCCTCTTCATTTTCTTA+TGG - chr1.1:78600432-78600451 MS.gene76272:CDS 30.0%
!! GTTGCTGTTGTTTAAAGTTT+TGG + chr1.1:78600562-78600581 None:intergenic 30.0%
AGTTGTTATGGATTTGACTC+GGG + chr1.1:78600717-78600736 None:intergenic 35.0%
ATTGGACACGTATTACTATG+TGG - chr1.1:78601342-78601361 MS.gene76272:CDS 35.0%
GAAAATGAAGAGGATGAAGT+TGG + chr1.1:78600429-78600448 None:intergenic 35.0%
GACCTTGCAAATTCATTAGT+TGG - chr1.1:78601778-78601797 MS.gene76272:CDS 35.0%
GTAATCAGCATGTGAAGAAA+GGG + chr1.1:78600657-78600676 None:intergenic 35.0%
GTCAAGATATTTGCATTGAG+CGG + chr1.1:78600987-78601006 None:intergenic 35.0%
TAGTAATACGTGTCCAATTG+CGG + chr1.1:78601340-78601359 None:intergenic 35.0%
TATTTCTCCAGAATCGGAAT+CGG - chr1.1:78600812-78600831 MS.gene76272:CDS 35.0%
TGTAATCAGCATGTGAAGAA+AGG + chr1.1:78600658-78600677 None:intergenic 35.0%
TTCAACACAGAGAAACTTTC+TGG - chr1.1:78600752-78600771 MS.gene76272:CDS 35.0%
TTGAAACCAAGTCAGAATCA+CGG + chr1.1:78601258-78601277 None:intergenic 35.0%
TTGGACACGTATTACTATGT+GGG - chr1.1:78601343-78601362 MS.gene76272:CDS 35.0%
! AACATCAAGTAGTGTGGTTT+TGG + chr1.1:78600498-78600517 None:intergenic 35.0%
! TCACTTCTTTGTCGATTATC+GGG - chr1.1:78601722-78601741 MS.gene76272:CDS 35.0%
AAGGTTAAGAATGTAGCGCT+AGG - chr1.1:78601112-78601131 MS.gene76272:CDS 40.0%
AGAACCATGTATGCTTGACT+CGG + chr1.1:78600845-78600864 None:intergenic 40.0%
AGCAGAAACATCAAGTAGTG+TGG + chr1.1:78600504-78600523 None:intergenic 40.0%
AGGTTAAGAATGTAGCGCTA+GGG - chr1.1:78601113-78601132 MS.gene76272:CDS 40.0%
AGTTACCATCGGCGTTAATA+AGG - chr1.1:78601093-78601112 MS.gene76272:CDS 40.0%
ATCGACAAAGAAGTGATCGT+TGG + chr1.1:78601718-78601737 None:intergenic 40.0%
ATCGGGAATATTCAACAGCA+AGG - chr1.1:78601739-78601758 MS.gene76272:CDS 40.0%
ATGTTCCGAGAATGTGCTAA+TGG + chr1.1:78600464-78600483 None:intergenic 40.0%
ATTATCTCCGGAACAAGTCA+AGG - chr1.1:78600779-78600798 MS.gene76272:CDS 40.0%
CTTAACCTTATTAACGCCGA+TGG + chr1.1:78601101-78601120 None:intergenic 40.0%
GCAGAGCGATGTTTATAATG+TGG - chr1.1:78601483-78601502 MS.gene76272:CDS 40.0%
TCGGGAATATTCAACAGCAA+GGG - chr1.1:78601740-78601759 MS.gene76272:CDS 40.0%
TGTCTCTATCAAGTCTCCTA+CGG - chr1.1:78601031-78601050 MS.gene76272:CDS 40.0%
TGTTCCGAGAATGTGCTAAT+GGG + chr1.1:78600463-78600482 None:intergenic 40.0%
TTTCCCCATTAGCACATTCT+CGG - chr1.1:78600456-78600475 MS.gene76272:CDS 40.0%
! ATTACTATGTGGGACTGGTA+GGG - chr1.1:78601353-78601372 MS.gene76272:CDS 40.0%
! GTTCGTGATGCGTTTGTTAA+GGG - chr1.1:78601505-78601524 MS.gene76272:CDS 40.0%
! TATTACTATGTGGGACTGGT+AGG - chr1.1:78601352-78601371 MS.gene76272:CDS 40.0%
! TTCGTGATGCGTTTGTTAAG+GGG - chr1.1:78601506-78601525 MS.gene76272:CDS 40.0%
! TTTCGGAGAAGGGAAAGTTT+TGG - chr1.1:78601627-78601646 MS.gene76272:CDS 40.0%
!! GTCGTTTTCGTATTGCTTAG+TGG - chr1.1:78601231-78601250 MS.gene76272:CDS 40.0%
!! TGACTTGTTCCGGAGATAAT+GGG + chr1.1:78600779-78600798 None:intergenic 40.0%
!! TTGACTTGTTCCGGAGATAA+TGG + chr1.1:78600780-78600799 None:intergenic 40.0%
!!! TAGTGTGGTTTTGGCATTGT+GGG + chr1.1:78600489-78600508 None:intergenic 40.0%
AAAGTCCCTACCGAATCAAC+CGG + chr1.1:78601679-78601698 None:intergenic 45.0%
AATAATCCCTCCATTCCCTG+CGG + chr1.1:78601434-78601453 None:intergenic 45.0%
AGGGAATGGAGGGATTATTG+TGG - chr1.1:78601435-78601454 MS.gene76272:CDS 45.0%
CACGTATTACTATGTGGGAC+TGG - chr1.1:78601348-78601367 MS.gene76272:CDS 45.0%
CTTTCTGGACCCATTATCTC+CGG - chr1.1:78600767-78600786 MS.gene76272:CDS 45.0%
GATTATTGTGGATTCCGGCA+CGG - chr1.1:78601447-78601466 MS.gene76272:CDS 45.0%
GGAGGGATTATTGTGGATTC+CGG - chr1.1:78601442-78601461 MS.gene76272:CDS 45.0%
GGCGAGTATTTCTCCAGAAT+CGG - chr1.1:78600806-78600825 MS.gene76272:CDS 45.0%
GTTACCGAGACAGTTACCAT+CGG - chr1.1:78601082-78601101 MS.gene76272:CDS 45.0%
GTTCCGAGAATGTGCTAATG+GGG + chr1.1:78600462-78600481 None:intergenic 45.0%
TACCATTGCGACACTGAGAT+TGG + chr1.1:78601009-78601028 None:intergenic 45.0%
TATCAAGTCTCCTACGGTGA+TGG - chr1.1:78601037-78601056 MS.gene76272:CDS 45.0%
TGGCGTTTCATTTCGGAGAA+GGG - chr1.1:78601617-78601636 MS.gene76272:CDS 45.0%
! AACAACGAAGGCTTGTTCGT+TGG - chr1.1:78601145-78601164 MS.gene76272:CDS 45.0%
! AATACCGGAGACGAGTTTTG+AGG - chr1.1:78601402-78601421 MS.gene76272:CDS 45.0%
! AATTGCGGATTACGCCGTAA+CGG + chr1.1:78601325-78601344 None:intergenic 45.0%
! GGTTCGTGATGCGTTTGTTA+AGG - chr1.1:78601504-78601523 MS.gene76272:CDS 45.0%
! TGCGTTTGTTAAGGGGACAA+AGG - chr1.1:78601513-78601532 MS.gene76272:CDS 45.0%
!! AGTTGGCTCGAAAATGGGAT+CGG + chr1.1:78600930-78600949 None:intergenic 45.0%
!! GATGCAGTTGGCTCGAAAAT+GGG + chr1.1:78600935-78600954 None:intergenic 45.0%
!! TGATGCAGTTGGCTCGAAAA+TGG + chr1.1:78600936-78600955 None:intergenic 45.0%
!! TTACCTGGTACCGGTTGATT+CGG - chr1.1:78601666-78601685 MS.gene76272:CDS 45.0%
!!! AGGGAAAGTTTTGGTGCTTC+CGG - chr1.1:78601636-78601655 MS.gene76272:CDS 45.0%
!!! AGTGTGGTTTTGGCATTGTG+GGG + chr1.1:78600488-78600507 None:intergenic 45.0%
!!! GTAGTGTGGTTTTGGCATTG+TGG + chr1.1:78600490-78600509 None:intergenic 45.0%
AACGCCGATGGTAACTGTCT+CGG + chr1.1:78601089-78601108 None:intergenic 50.0%
AAGAATGTAGCGCTAGGGTG+TGG - chr1.1:78601118-78601137 MS.gene76272:CDS 50.0%
ACACTGGAAGCGACATAAGC+TGG - chr1.1:78600867-78600886 MS.gene76272:CDS 50.0%
AGCTGTGCCGGAAAAGAAAG+TGG + chr1.1:78601202-78601221 None:intergenic 50.0%
AGTGGACCGTGATTCTGACT+TGG - chr1.1:78601249-78601268 MS.gene76272:CDS 50.0%
CACTGGAAGCGACATAAGCT+GGG - chr1.1:78600868-78600887 MS.gene76272:CDS 50.0%
GACCAATCTCAGTGTCGCAA+TGG - chr1.1:78601004-78601023 MS.gene76272:CDS 50.0%
GCATACATGGTTCTCGACAC+TGG - chr1.1:78600851-78600870 MS.gene76272:CDS 50.0%
GGCGAAGAATTACCTGGTAC+CGG - chr1.1:78601657-78601676 MS.gene76272:CDS 50.0%
GGGTGTGGTCATAACAACGA+AGG - chr1.1:78601133-78601152 MS.gene76272:CDS 50.0%
GGTACCAGGTAATTCTTCGC+CGG + chr1.1:78601658-78601677 None:intergenic 50.0%
GTAACGGCGTCACGAGAAAA+CGG + chr1.1:78601298-78601317 None:intergenic 50.0%
GTGGCGTTTCATTTCGGAGA+AGG - chr1.1:78601616-78601635 MS.gene76272:CDS 50.0%
GTGTAGGAAGCTGATGCAGT+TGG + chr1.1:78600947-78600966 None:intergenic 50.0%
GTTACGGCGTAATCCGCAAT+TGG - chr1.1:78601324-78601343 MS.gene76272:CDS 50.0%
TCCACCTCAAAACTCGTCTC+CGG + chr1.1:78601409-78601428 None:intergenic 50.0%
TCCGGAACAAGTCAAGGTAG+CGG - chr1.1:78600785-78600804 MS.gene76272:CDS 50.0%
TGTGTATGAGCCATCACCGT+AGG + chr1.1:78601050-78601069 None:intergenic 50.0%
TTCACAAGAGAGCTGCGTGT+AGG + chr1.1:78600963-78600982 None:intergenic 50.0%
TTTGTCGTCGAAGACAAGCG+TGG - chr1.1:78601582-78601601 MS.gene76272:CDS 50.0%
! CGGTGGTCCACTTTCTTTTC+CGG - chr1.1:78601192-78601211 MS.gene76272:CDS 50.0%
! GGTGATGGCTCATACACAGT+AGG - chr1.1:78601052-78601071 MS.gene76272:CDS 50.0%
! GTTGGTGCAGCTGGCTTAAT+CGG - chr1.1:78601163-78601182 MS.gene76272:CDS 50.0%
!! ACCATGTATGCTTGACTCGG+TGG + chr1.1:78600842-78600861 None:intergenic 50.0%
!! TGGTACCGGTTGATTCGGTA+GGG - chr1.1:78601671-78601690 MS.gene76272:CDS 50.0%
!!! AGTTTTGAGGTGGATTCCGC+AGG - chr1.1:78601415-78601434 MS.gene76272:CDS 50.0%
!!! GTTTTGAGGTGGATTCCGCA+GGG - chr1.1:78601416-78601435 MS.gene76272:CDS 50.0%
CCGAAATGAAACGCCACCGT+CGG + chr1.1:78601613-78601632 None:intergenic 55.0%
CCGACGGTGGCGTTTCATTT+CGG - chr1.1:78601610-78601629 MS.gene76272:CDS 55.0%
CGGCGAGTTGCTTGCAATAC+CGG - chr1.1:78601387-78601406 MS.gene76272:CDS 55.0%
CTACCGAATCAACCGGTACC+AGG + chr1.1:78601672-78601691 None:intergenic 55.0%
GACAAAGGATTTGCCCGCGA+CGG - chr1.1:78601528-78601547 MS.gene76272:CDS 55.0%
GACAAGCGTGGAAGTTCCGA+CGG - chr1.1:78601594-78601613 MS.gene76272:CDS 55.0%
GACGTCGAATTGAGCTGTGC+CGG + chr1.1:78601214-78601233 None:intergenic 55.0%
GCCACCGAGTCAAGCATACA+TGG - chr1.1:78600838-78600857 MS.gene76272:CDS 55.0%
GCTCGAAAATGGGATCGGCT+TGG + chr1.1:78600925-78600944 None:intergenic 55.0%
GCTTCCGGCGAAGAATTACC+TGG - chr1.1:78601651-78601670 MS.gene76272:CDS 55.0%
TATTGTGGATTCCGGCACGG+CGG - chr1.1:78601450-78601469 MS.gene76272:CDS 55.0%
TGGATTCCGCAGGGAATGGA+GGG - chr1.1:78601425-78601444 MS.gene76272:CDS 55.0%
! GCAGCTGGCTTAATCGGCTT+AGG - chr1.1:78601169-78601188 MS.gene76272:CDS 55.0%
! GCTGGCTTAATCGGCTTAGG+CGG - chr1.1:78601172-78601191 MS.gene76272:CDS 55.0%
! GGACTGGTAGGGATAAGCGT+CGG - chr1.1:78601364-78601383 MS.gene76272:CDS 55.0%
!! ATCGGCTTGGCGGTAGCAAT+CGG + chr1.1:78600912-78600931 None:intergenic 55.0%
!! ATTTGACTCGGGCTGAGTCG+CGG + chr1.1:78600706-78600725 None:intergenic 55.0%
!! CGAAAATGGGATCGGCTTGG+CGG + chr1.1:78600922-78600941 None:intergenic 55.0%
!! CTGGTACCGGTTGATTCGGT+AGG - chr1.1:78601670-78601689 MS.gene76272:CDS 55.0%
!! GCCGCTACCTTGACTTGTTC+CGG + chr1.1:78600789-78600808 None:intergenic 55.0%
!! TGGCTCACCGATTCCGATTC+TGG + chr1.1:78600822-78600841 None:intergenic 55.0%
!!! ACCGGAGACGAGTTTTGAGG+TGG - chr1.1:78601405-78601424 MS.gene76272:CDS 55.0%
AACGACACGTCATCCGTCGC+GGG + chr1.1:78601544-78601563 None:intergenic 60.0%
AAGCGTGGAAGTTCCGACGG+TGG - chr1.1:78601597-78601616 MS.gene76272:CDS 60.0%
CAACGACACGTCATCCGTCG+CGG + chr1.1:78601545-78601564 None:intergenic 60.0%
GTGGATTCCGCAGGGAATGG+AGG - chr1.1:78601424-78601443 MS.gene76272:CDS 60.0%
! GAGGTGGATTCCGCAGGGAA+TGG - chr1.1:78601421-78601440 MS.gene76272:CDS 60.0%
! GGCTTAATCGGCTTAGGCGG+TGG - chr1.1:78601175-78601194 MS.gene76272:CDS 60.0%
! GGCTTGTTCGTTGGTGCAGC+TGG - chr1.1:78601154-78601173 MS.gene76272:CDS 60.0%
!! CTGGTAGGGATAAGCGTCGG+CGG - chr1.1:78601367-78601386 MS.gene76272:CDS 60.0%
ACGCCGTAACGGCGCGGTAA+CGG + chr1.1:78601314-78601333 None:intergenic 65.0%
ACGCCGTTACCGCGCCGTTA+CGG - chr1.1:78601308-78601327 MS.gene76272:CDS 65.0%
ATTCCGGCACGGCGGTGACA+CGG - chr1.1:78601458-78601477 MS.gene76272:CDS 65.0%
CGGATTACGCCGTAACGGCG+CGG + chr1.1:78601320-78601339 None:intergenic 65.0%
TGGCGGTAGCAATCGGCGCA+GGG + chr1.1:78600905-78600924 None:intergenic 65.0%
TTGGCGGTAGCAATCGGCGC+AGG + chr1.1:78600906-78600925 None:intergenic 65.0%
CAACCGTGTCACCGCCGTGC+CGG + chr1.1:78601464-78601483 None:intergenic 70.0%
GGCTGAGTCGCGGTCGAGTC+GGG + chr1.1:78600696-78600715 None:intergenic 70.0%
GGGCTGAGTCGCGGTCGAGT+CGG + chr1.1:78600697-78600716 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 78600410 78601822 78600410 ID=MS.gene76272
chr1.1 mRNA 78600410 78601822 78600410 ID=MS.gene76272.t1;Parent=MS.gene76272
chr1.1 exon 78600410 78601822 78600410 ID=MS.gene76272.t1.exon1;Parent=MS.gene76272.t1
chr1.1 CDS 78600410 78601822 78600410 ID=cds.MS.gene76272.t1;Parent=MS.gene76272.t1
Gene Sequence

>MS.gene76272

ATGGCTCATAAATTTTCCAACTTCATCCTCTTCATTTTCTTATGGGTTTCCCCATTAGCACATTCTCGGAACATACCCCACAATGCCAAAACCACACTACTTGATGTTTCTGCTTCCATTCAAAAAACATATCAAGTTCTCAACTTCAGCCAAAACTTTAAACAACAGCAACAACAACAACAACAAAAGAGTTCATTTACTTCATCAACATCAACACTCTCTTTGCAACTTCATTCACGTGCATCCCTTTCTTCACATGCTGATTACAAGTCACTAACATTATCCCGACTCGACCGCGACTCAGCCCGAGTCAAATCCATAACAACTAAGTTAAATCAAAACTTCAACACAGAGAAACTTTCTGGACCCATTATCTCCGGAACAAGTCAAGGTAGCGGCGAGTATTTCTCCAGAATCGGAATCGGTGAGCCACCGAGTCAAGCATACATGGTTCTCGACACTGGAAGCGACATAAGCTGGGTACAATGCGCACCCTGCGCCGATTGCTACCGCCAAGCCGATCCCATTTTCGAGCCAACTGCATCAGCTTCCTACACGCAGCTCTCTTGTGAAGCCGCTCAATGCAAATATCTTGACCAATCTCAGTGTCGCAATGGTAACTGTCTCTATCAAGTCTCCTACGGTGATGGCTCATACACAGTAGGAGACTTTGTTACCGAGACAGTTACCATCGGCGTTAATAAGGTTAAGAATGTAGCGCTAGGGTGTGGTCATAACAACGAAGGCTTGTTCGTTGGTGCAGCTGGCTTAATCGGCTTAGGCGGTGGTCCACTTTCTTTTCCGGCACAGCTCAATTCGACGTCGTTTTCGTATTGCTTAGTGGACCGTGATTCTGACTTGGTTTCAACGTTAGAGTTTGATTCACCGTTTTCTCGTGACGCCGTTACCGCGCCGTTACGGCGTAATCCGCAATTGGACACGTATTACTATGTGGGACTGGTAGGGATAAGCGTCGGCGGCGAGTTGCTTGCAATACCGGAGACGAGTTTTGAGGTGGATTCCGCAGGGAATGGAGGGATTATTGTGGATTCCGGCACGGCGGTGACACGGTTGCAGAGCGATGTTTATAATGTGGTTCGTGATGCGTTTGTTAAGGGGACAAAGGATTTGCCCGCGACGGATGACGTGTCGTTGTTTGATACGTGTTATGATTTGTCGTCGAAGACAAGCGTGGAAGTTCCGACGGTGGCGTTTCATTTCGGAGAAGGGAAAGTTTTGGTGCTTCCGGCGAAGAATTACCTGGTACCGGTTGATTCGGTAGGGACTTTCTGTTTTGCGTTTGCTCCAACGATCACTTCTTTGTCGATTATCGGGAATATTCAACAGCAAGGGACACGTGTCAGTTTTGACCTTGCAAATTCATTAGTTGGATTTTCCCCTAACAGTTGCTAA
Protein sequence

>MS.gene76272.t1

MAHKFSNFILFIFLWVSPLAHSRNIPHNAKTTLLDVSASIQKTYQVLNFSQNFKQQQQQQQQKSSFTSSTSTLSLQLHSRASLSSHADYKSLTLSRLDRDSARVKSITTKLNQNFNTEKLSGPIISGTSQGSGEYFSRIGIGEPPSQAYMVLDTGSDISWVQCAPCADCYRQADPIFEPTASASYTQLSCEAAQCKYLDQSQCRNGNCLYQVSYGDGSYTVGDFVTETVTIGVNKVKNVALGCGHNNEGLFVGAAGLIGLGGGPLSFPAQLNSTSFSYCLVDRDSDLVSTLEFDSPFSRDAVTAPLRRNPQLDTYYYVGLVGISVGGELLAIPETSFEVDSAGNGGIIVDSGTAVTRLQSDVYNVVRDAFVKGTKDLPATDDVSLFDTCYDLSSKTSVEVPTVAFHFGEGKVLVLPAKNYLVPVDSVGTFCFAFAPTITSLSIIGNIQQQGTRVSFDLANSLVGFSPNSC