Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76276.t1 | XP_013470213.1 | 97.7 | 218 | 5 | 0 | 1 | 218 | 125 | 342 | 3.00E-123 | 451.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76276.t1 | Q9LFR7 | 54.1 | 218 | 95 | 3 | 1 | 218 | 129 | 341 | 1.5e-57 | 224.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76276.t1 | G7ZZC3 | 97.7 | 218 | 5 | 0 | 1 | 218 | 125 | 342 | 2.2e-123 | 451.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051201 | MS.gene76276 | 0.803837 | 2.88E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91548 | MS.gene76276 | PPI |
| MS.gene76276 | MS.gene005188 | PPI |
| MS.gene76276 | MS.gene52621 | PPI |
| MS.gene76276 | MS.gene44055 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76276.t1 | MTR_1g111280 | 96.818 | 220 | 7 | 0 | 1 | 220 | 125 | 344 | 5.11e-161 | 449 |
| MS.gene76276.t1 | MTR_7g406880 | 55.066 | 227 | 90 | 6 | 1 | 218 | 126 | 349 | 6.00e-80 | 243 |
| MS.gene76276.t1 | MTR_4g050140 | 40.444 | 225 | 113 | 8 | 1 | 218 | 105 | 315 | 1.74e-41 | 143 |
| MS.gene76276.t1 | MTR_7g107040 | 39.013 | 223 | 119 | 7 | 1 | 218 | 106 | 316 | 9.45e-41 | 141 |
| MS.gene76276.t1 | MTR_1g102170 | 37.619 | 210 | 115 | 4 | 1 | 205 | 132 | 330 | 1.71e-37 | 133 |
| MS.gene76276.t1 | MTR_8g035520 | 38.462 | 221 | 121 | 6 | 2 | 219 | 117 | 325 | 4.56e-36 | 129 |
| MS.gene76276.t1 | MTR_6g464320 | 37.500 | 224 | 118 | 5 | 2 | 219 | 119 | 326 | 4.91e-36 | 129 |
| MS.gene76276.t1 | MTR_0007s0520 | 41.827 | 208 | 102 | 5 | 2 | 201 | 116 | 312 | 6.83e-36 | 129 |
| MS.gene76276.t1 | MTR_6g464510 | 36.161 | 224 | 122 | 5 | 1 | 219 | 120 | 327 | 3.40e-35 | 127 |
| MS.gene76276.t1 | MTR_6g464280 | 37.946 | 224 | 117 | 5 | 2 | 219 | 118 | 325 | 1.56e-34 | 125 |
| MS.gene76276.t1 | MTR_6g464120 | 38.693 | 199 | 106 | 4 | 2 | 195 | 120 | 307 | 2.16e-33 | 125 |
| MS.gene76276.t1 | MTR_8g035540 | 36.818 | 220 | 124 | 6 | 2 | 218 | 109 | 316 | 1.04e-32 | 120 |
| MS.gene76276.t1 | MTR_1g102160 | 33.186 | 226 | 128 | 5 | 1 | 218 | 115 | 325 | 1.40e-32 | 120 |
| MS.gene76276.t1 | MTR_1g089310 | 39.000 | 200 | 101 | 6 | 1 | 197 | 142 | 323 | 2.14e-31 | 117 |
| MS.gene76276.t1 | MTR_1g089310 | 39.000 | 200 | 101 | 6 | 1 | 197 | 158 | 339 | 2.98e-31 | 117 |
| MS.gene76276.t1 | MTR_4g086510 | 34.091 | 220 | 129 | 7 | 1 | 218 | 112 | 317 | 6.33e-31 | 115 |
| MS.gene76276.t1 | MTR_7g093950 | 34.685 | 222 | 123 | 6 | 1 | 218 | 143 | 346 | 5.17e-30 | 114 |
| MS.gene76276.t1 | MTR_3g012440 | 37.436 | 195 | 108 | 6 | 6 | 196 | 130 | 314 | 1.09e-29 | 113 |
| MS.gene76276.t1 | MTR_1g082210 | 34.685 | 222 | 118 | 8 | 1 | 218 | 142 | 340 | 4.84e-29 | 111 |
| MS.gene76276.t1 | MTR_1g012430 | 38.122 | 181 | 98 | 6 | 1 | 179 | 102 | 270 | 5.86e-29 | 110 |
| MS.gene76276.t1 | MTR_3g101420 | 34.545 | 220 | 117 | 8 | 1 | 207 | 107 | 312 | 7.92e-29 | 110 |
| MS.gene76276.t1 | MTR_6g065120 | 37.443 | 219 | 115 | 9 | 1 | 214 | 134 | 335 | 1.70e-28 | 110 |
| MS.gene76276.t1 | MTR_7g056207 | 33.929 | 224 | 128 | 9 | 1 | 220 | 144 | 351 | 3.94e-28 | 109 |
| MS.gene76276.t1 | MTR_8g035500 | 35.407 | 209 | 121 | 7 | 1 | 205 | 111 | 309 | 3.95e-28 | 108 |
| MS.gene76276.t1 | MTR_6g065400 | 35.321 | 218 | 121 | 8 | 1 | 214 | 132 | 333 | 1.60e-27 | 107 |
| MS.gene76276.t1 | MTR_6g065270 | 35.484 | 217 | 122 | 8 | 1 | 214 | 134 | 335 | 2.17e-27 | 107 |
| MS.gene76276.t1 | MTR_6g065370 | 34.404 | 218 | 123 | 8 | 1 | 214 | 132 | 333 | 3.01e-27 | 106 |
| MS.gene76276.t1 | MTR_6g065430 | 37.563 | 197 | 105 | 7 | 1 | 194 | 126 | 307 | 3.54e-27 | 106 |
| MS.gene76276.t1 | MTR_1g105020 | 30.556 | 216 | 138 | 6 | 1 | 211 | 110 | 318 | 7.58e-26 | 102 |
| MS.gene76276.t1 | MTR_6g065110 | 33.790 | 219 | 127 | 8 | 1 | 216 | 133 | 336 | 1.76e-24 | 99.4 |
| MS.gene76276.t1 | MTR_4g086480 | 33.000 | 200 | 117 | 4 | 1 | 195 | 114 | 301 | 2.87e-24 | 98.2 |
| MS.gene76276.t1 | MTR_4g086470 | 33.520 | 179 | 107 | 3 | 1 | 179 | 113 | 279 | 2.43e-23 | 95.9 |
| MS.gene76276.t1 | MTR_0007s0480 | 41.875 | 160 | 82 | 4 | 50 | 201 | 2 | 158 | 3.54e-23 | 92.0 |
| MS.gene76276.t1 | MTR_6g065340 | 34.259 | 216 | 110 | 8 | 1 | 214 | 143 | 328 | 4.08e-22 | 92.8 |
| MS.gene76276.t1 | MTR_8g040860 | 30.942 | 223 | 135 | 8 | 1 | 215 | 118 | 329 | 7.30e-21 | 89.4 |
| MS.gene76276.t1 | MTR_3g450680 | 32.432 | 222 | 129 | 10 | 1 | 212 | 118 | 328 | 7.33e-21 | 89.4 |
| MS.gene76276.t1 | MTR_5g005850 | 32.039 | 206 | 121 | 9 | 1 | 197 | 115 | 310 | 1.02e-20 | 89.0 |
| MS.gene76276.t1 | MTR_7g051020 | 30.093 | 216 | 139 | 8 | 1 | 211 | 113 | 321 | 1.32e-19 | 85.9 |
| MS.gene76276.t1 | MTR_1g104930 | 31.868 | 182 | 114 | 6 | 1 | 179 | 110 | 284 | 1.98e-18 | 82.4 |
| MS.gene76276.t1 | MTR_4g086540 | 29.717 | 212 | 114 | 8 | 1 | 209 | 119 | 298 | 4.15e-18 | 81.6 |
| MS.gene76276.t1 | MTR_6g022710 | 29.231 | 260 | 131 | 9 | 1 | 220 | 197 | 443 | 1.55e-17 | 80.9 |
| MS.gene76276.t1 | MTR_1g104933 | 31.892 | 185 | 106 | 7 | 1 | 179 | 108 | 278 | 2.92e-16 | 76.3 |
| MS.gene76276.t1 | MTR_5g005920 | 28.351 | 194 | 121 | 6 | 2 | 188 | 119 | 301 | 3.86e-16 | 76.3 |
| MS.gene76276.t1 | MTR_5g005900 | 30.481 | 187 | 111 | 8 | 1 | 178 | 111 | 287 | 1.86e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76276.t1 | AT5G16080 | 54.128 | 218 | 95 | 3 | 1 | 218 | 129 | 341 | 1.62e-74 | 229 |
| MS.gene76276.t1 | AT1G68620 | 47.248 | 218 | 101 | 4 | 1 | 218 | 126 | 329 | 3.61e-63 | 199 |
| MS.gene76276.t1 | AT5G62180 | 39.130 | 207 | 108 | 5 | 1 | 201 | 117 | 311 | 5.64e-37 | 132 |
| MS.gene76276.t1 | AT3G63010 | 39.801 | 201 | 98 | 7 | 1 | 197 | 143 | 324 | 5.13e-35 | 127 |
| MS.gene76276.t1 | AT2G45610 | 35.586 | 222 | 127 | 6 | 1 | 219 | 116 | 324 | 1.32e-34 | 125 |
| MS.gene76276.t1 | AT3G05120 | 35.000 | 220 | 120 | 6 | 1 | 218 | 143 | 341 | 5.43e-33 | 122 |
| MS.gene76276.t1 | AT5G06570 | 38.500 | 200 | 109 | 7 | 1 | 194 | 128 | 319 | 9.70e-32 | 118 |
| MS.gene76276.t1 | AT5G06570 | 38.500 | 200 | 109 | 7 | 1 | 194 | 128 | 319 | 9.70e-32 | 118 |
| MS.gene76276.t1 | AT5G06570 | 37.879 | 198 | 113 | 6 | 1 | 194 | 113 | 304 | 1.04e-31 | 118 |
| MS.gene76276.t1 | AT5G06570 | 37.879 | 198 | 113 | 6 | 1 | 194 | 113 | 304 | 1.04e-31 | 118 |
| MS.gene76276.t1 | AT5G27320 | 36.199 | 221 | 116 | 8 | 1 | 218 | 141 | 339 | 3.81e-31 | 117 |
| MS.gene76276.t1 | AT2G45600 | 34.081 | 223 | 132 | 6 | 1 | 218 | 103 | 315 | 3.86e-29 | 111 |
| MS.gene76276.t1 | AT5G23530 | 35.268 | 224 | 124 | 8 | 1 | 219 | 124 | 331 | 7.85e-25 | 100 |
| MS.gene76276.t1 | AT1G19190 | 32.243 | 214 | 125 | 8 | 1 | 209 | 109 | 307 | 9.95e-25 | 99.4 |
| MS.gene76276.t1 | AT3G48700 | 30.732 | 205 | 124 | 7 | 1 | 196 | 111 | 306 | 7.15e-23 | 94.7 |
| MS.gene76276.t1 | AT2G03550 | 30.275 | 218 | 131 | 8 | 1 | 212 | 105 | 307 | 1.63e-20 | 88.2 |
| MS.gene76276.t1 | AT3G48690 | 32.065 | 184 | 111 | 8 | 1 | 179 | 108 | 282 | 2.39e-19 | 85.1 |
| MS.gene76276.t1 | AT1G47480 | 29.851 | 201 | 119 | 6 | 1 | 197 | 109 | 291 | 5.35e-19 | 84.0 |
| MS.gene76276.t1 | AT5G14310 | 30.435 | 230 | 123 | 7 | 1 | 197 | 188 | 413 | 2.12e-18 | 83.2 |
| MS.gene76276.t1 | AT1G49650 | 28.729 | 181 | 116 | 6 | 1 | 179 | 165 | 334 | 2.23e-17 | 80.1 |
| MS.gene76276.t1 | AT1G49660 | 39.423 | 104 | 45 | 3 | 1 | 98 | 109 | 200 | 2.41e-17 | 79.3 |
| MS.gene76276.t1 | AT1G49640 | 38.776 | 98 | 48 | 4 | 1 | 98 | 111 | 196 | 3.50e-15 | 73.2 |
Find 42 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAGACCCTTTAAATTTAA+AGG | 0.113115 | 1.1:+78571467 | None:intergenic |
| TCTAAGGCCTTTAAATTTAA+AGG | 0.122353 | 1.1:-78571474 | MS.gene76276:CDS |
| GTGTAATCCATTGGTGAAAA+TGG | 0.278139 | 1.1:-78571297 | MS.gene76276:CDS |
| TAGCAGCTTCAGATACTTAC+TGG | 0.285298 | 1.1:-78571361 | MS.gene76276:CDS |
| TTCACATGAATCTATCCTTT+TGG | 0.311453 | 1.1:+78571505 | None:intergenic |
| CCTGAGATTTACTTAGAATC+TGG | 0.322976 | 1.1:+78571126 | None:intergenic |
| GTTGAATGTGAAGTGTTTAA+AGG | 0.324790 | 1.1:-78571164 | MS.gene76276:CDS |
| CTAAGGCCTTTAAATTTAAA+GGG | 0.355632 | 1.1:-78571473 | MS.gene76276:CDS |
| GCTACTGATGATGCCTATAT+TGG | 0.378056 | 1.1:-78571264 | MS.gene76276:CDS |
| CATGTGAAGGTGCATTTCTA+AGG | 0.401620 | 1.1:-78571490 | MS.gene76276:CDS |
| AAATGCATGGAACAATTATC+TGG | 0.405311 | 1.1:-78571398 | MS.gene76276:CDS |
| TCAGATATACACACCAATAT+AGG | 0.414402 | 1.1:+78571251 | None:intergenic |
| GATAAGAGTTGTTCAAATGA+TGG | 0.417122 | 1.1:-78571096 | MS.gene76276:CDS |
| TGTGATGCTTTAGGAAGAAC+AGG | 0.432736 | 1.1:-78571194 | MS.gene76276:CDS |
| TGGCGATTGGCATTACCATA+TGG | 0.452089 | 1.1:-78571341 | MS.gene76276:CDS |
| CTACCAGCACCTTATGATGA+TGG | 0.461625 | 1.1:-78571671 | MS.gene76276:CDS |
| TGTGAAGTGTTTAAAGGTGT+TGG | 0.470256 | 1.1:-78571158 | MS.gene76276:CDS |
| CCAGATTCTAAGTAAATCTC+AGG | 0.474814 | 1.1:-78571126 | MS.gene76276:CDS |
| TTCAGATACTTACTGGCGAT+TGG | 0.489907 | 1.1:-78571354 | MS.gene76276:CDS |
| CTTTAGGAAGAACAGGTACA+AGG | 0.492026 | 1.1:-78571187 | MS.gene76276:CDS |
| TGATCACGATCTTCACCATA+TGG | 0.493029 | 1.1:+78571326 | None:intergenic |
| ATCTGAGATGGATATATTGA+AGG | 0.500971 | 1.1:-78571234 | MS.gene76276:CDS |
| TATATTGAAGGATAGGAACT+TGG | 0.516422 | 1.1:-78571222 | MS.gene76276:CDS |
| AGATGGATATATTGAAGGAT+AGG | 0.521304 | 1.1:-78571229 | MS.gene76276:CDS |
| GCATTTAAACCATCATCATA+AGG | 0.523827 | 1.1:+78571662 | None:intergenic |
| TCATCATAAGGTGCTGGTAG+AGG | 0.523884 | 1.1:+78571674 | None:intergenic |
| TAGCTTATAATGTTGCCAAA+AGG | 0.527439 | 1.1:-78571520 | MS.gene76276:CDS |
| GGATTGTGTCAAATCATTCA+TGG | 0.528865 | 1.1:-78571075 | MS.gene76276:CDS |
| TTCTTAGGAGGTGATAGTGC+AGG | 0.529844 | 1.1:-78571551 | MS.gene76276:CDS |
| AAACCATCATCATAAGGTGC+TGG | 0.546605 | 1.1:+78571668 | None:intergenic |
| ATGAGAGTAGTGAATTTGAA+TGG | 0.584788 | 1.1:-78571604 | MS.gene76276:CDS |
| AACATTATCAGAGAAATGCA+TGG | 0.593132 | 1.1:-78571411 | MS.gene76276:CDS |
| AAAAGGATAGATTCATGTGA+AGG | 0.595074 | 1.1:-78571503 | MS.gene76276:CDS |
| TTCACCAATGGATTACACCA+TGG | 0.598695 | 1.1:+78571302 | None:intergenic |
| ATTGGTGTGTATATCTGAGA+TGG | 0.604384 | 1.1:-78571246 | MS.gene76276:CDS |
| TCATCCATGGTGTAATCCAT+TGG | 0.611826 | 1.1:-78571306 | MS.gene76276:CDS |
| TAATCCATTGGTGAAAATGG+AGG | 0.623717 | 1.1:-78571294 | MS.gene76276:CDS |
| GTGAAGATCGTGATCATCCA+TGG | 0.631742 | 1.1:-78571319 | MS.gene76276:CDS |
| TTTAGGAAGAACAGGTACAA+GGG | 0.650756 | 1.1:-78571186 | MS.gene76276:CDS |
| TTAGGAGGTGATAGTGCAGG+TGG | 0.653434 | 1.1:-78571548 | MS.gene76276:CDS |
| AGAGTAGTGAATTTGAATGG+TGG | 0.668440 | 1.1:-78571601 | MS.gene76276:CDS |
| ATGGTTTAAATGCACTAATG+TGG | 0.680277 | 1.1:-78571652 | MS.gene76276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGACCCTTTAAATTTAA+AGG | + | chr1.1:78571310-78571329 | None:intergenic | 20.0% |
| !!! | ATTTTGATACAACCATTTTT+TGG | - | chr1.1:78571328-78571347 | MS.gene76276:CDS | 20.0% |
| ! | CTAAGGCCTTTAAATTTAAA+GGG | - | chr1.1:78571301-78571320 | MS.gene76276:CDS | 25.0% |
| !! | AACTTTTCTAATGTCTTCTT+AGG | - | chr1.1:78571208-78571227 | MS.gene76276:CDS | 25.0% |
| !! | TCTAAGGCCTTTAAATTTAA+AGG | - | chr1.1:78571300-78571319 | MS.gene76276:CDS | 25.0% |
| AAAAGGATAGATTCATGTGA+AGG | - | chr1.1:78571271-78571290 | MS.gene76276:CDS | 30.0% | |
| AAATGCATGGAACAATTATC+TGG | - | chr1.1:78571376-78571395 | MS.gene76276:CDS | 30.0% | |
| AACATTATCAGAGAAATGCA+TGG | - | chr1.1:78571363-78571382 | MS.gene76276:CDS | 30.0% | |
| AGATGGATATATTGAAGGAT+AGG | - | chr1.1:78571545-78571564 | MS.gene76276:CDS | 30.0% | |
| ATGAGAGTAGTGAATTTGAA+TGG | - | chr1.1:78571170-78571189 | MS.gene76276:CDS | 30.0% | |
| ATGGTTTAAATGCACTAATG+TGG | - | chr1.1:78571122-78571141 | MS.gene76276:CDS | 30.0% | |
| GATAAGAGTTGTTCAAATGA+TGG | - | chr1.1:78571678-78571697 | MS.gene76276:CDS | 30.0% | |
| GCATTTAAACCATCATCATA+AGG | + | chr1.1:78571115-78571134 | None:intergenic | 30.0% | |
| TAGCTTATAATGTTGCCAAA+AGG | - | chr1.1:78571254-78571273 | MS.gene76276:CDS | 30.0% | |
| TATATTGAAGGATAGGAACT+TGG | - | chr1.1:78571552-78571571 | MS.gene76276:CDS | 30.0% | |
| TCAGATATACACACCAATAT+AGG | + | chr1.1:78571526-78571545 | None:intergenic | 30.0% | |
| ! | ATCTGAGATGGATATATTGA+AGG | - | chr1.1:78571540-78571559 | MS.gene76276:CDS | 30.0% |
| ! | CTTTCTTTTCCACCAAAAAA+TGG | + | chr1.1:78571343-78571362 | None:intergenic | 30.0% |
| ! | GTTGAATGTGAAGTGTTTAA+AGG | - | chr1.1:78571610-78571629 | MS.gene76276:CDS | 30.0% |
| ! | TTCACATGAATCTATCCTTT+TGG | + | chr1.1:78571272-78571291 | None:intergenic | 30.0% |
| ! | TTTTCTAATGTCTTCTTAGG+AGG | - | chr1.1:78571211-78571230 | MS.gene76276:CDS | 30.0% |
| !!! | TTGATACAACCATTTTTTGG+TGG | - | chr1.1:78571331-78571350 | MS.gene76276:CDS | 30.0% |
| AGAGTAGTGAATTTGAATGG+TGG | - | chr1.1:78571173-78571192 | MS.gene76276:CDS | 35.0% | |
| ATTGGTGTGTATATCTGAGA+TGG | - | chr1.1:78571528-78571547 | MS.gene76276:CDS | 35.0% | |
| CCAGATTCTAAGTAAATCTC+AGG | - | chr1.1:78571648-78571667 | MS.gene76276:CDS | 35.0% | |
| CCTGAGATTTACTTAGAATC+TGG | + | chr1.1:78571651-78571670 | None:intergenic | 35.0% | |
| GGATTGTGTCAAATCATTCA+TGG | - | chr1.1:78571699-78571718 | MS.gene76276:CDS | 35.0% | |
| GTGTAATCCATTGGTGAAAA+TGG | - | chr1.1:78571477-78571496 | MS.gene76276:CDS | 35.0% | |
| TAATCCATTGGTGAAAATGG+AGG | - | chr1.1:78571480-78571499 | MS.gene76276:CDS | 35.0% | |
| TTTAGGAAGAACAGGTACAA+GGG | - | chr1.1:78571588-78571607 | MS.gene76276:CDS | 35.0% | |
| ! | AATTCCTCCATTTTCACCAA+TGG | + | chr1.1:78571487-78571506 | None:intergenic | 35.0% |
| ! | TGTGAAGTGTTTAAAGGTGT+TGG | - | chr1.1:78571616-78571635 | MS.gene76276:CDS | 35.0% |
| !! | TTGGAGTTTTGTGATGCTTT+AGG | - | chr1.1:78571571-78571590 | MS.gene76276:CDS | 35.0% |
| AAACCATCATCATAAGGTGC+TGG | + | chr1.1:78571109-78571128 | None:intergenic | 40.0% | |
| TAGCAGCTTCAGATACTTAC+TGG | - | chr1.1:78571413-78571432 | MS.gene76276:CDS | 40.0% | |
| TCATCCATGGTGTAATCCAT+TGG | - | chr1.1:78571468-78571487 | MS.gene76276:CDS | 40.0% | |
| TGATCACGATCTTCACCATA+TGG | + | chr1.1:78571451-78571470 | None:intergenic | 40.0% | |
| TTCAGATACTTACTGGCGAT+TGG | - | chr1.1:78571420-78571439 | MS.gene76276:CDS | 40.0% | |
| ! | CATGTGAAGGTGCATTTCTA+AGG | - | chr1.1:78571284-78571303 | MS.gene76276:CDS | 40.0% |
| ! | CTTTAGGAAGAACAGGTACA+AGG | - | chr1.1:78571587-78571606 | MS.gene76276:CDS | 40.0% |
| ! | GCTACTGATGATGCCTATAT+TGG | - | chr1.1:78571510-78571529 | MS.gene76276:CDS | 40.0% |
| !! | TGTGATGCTTTAGGAAGAAC+AGG | - | chr1.1:78571580-78571599 | MS.gene76276:CDS | 40.0% |
| !! | TTCACCAATGGATTACACCA+TGG | + | chr1.1:78571475-78571494 | None:intergenic | 40.0% |
| CTACCAGCACCTTATGATGA+TGG | - | chr1.1:78571103-78571122 | MS.gene76276:CDS | 45.0% | |
| GTGAAGATCGTGATCATCCA+TGG | - | chr1.1:78571455-78571474 | MS.gene76276:CDS | 45.0% | |
| TGGCGATTGGCATTACCATA+TGG | - | chr1.1:78571433-78571452 | MS.gene76276:CDS | 45.0% | |
| ! | TTCTTAGGAGGTGATAGTGC+AGG | - | chr1.1:78571223-78571242 | MS.gene76276:CDS | 45.0% |
| !! | TCATCATAAGGTGCTGGTAG+AGG | + | chr1.1:78571103-78571122 | None:intergenic | 45.0% |
| ! | TTAGGAGGTGATAGTGCAGG+TGG | - | chr1.1:78571226-78571245 | MS.gene76276:CDS | 50.0% |
| !!! | GGTGCTGGTAGAGGATTTTC+TGG | + | chr1.1:78571094-78571113 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78571067 | 78571729 | 78571067 | ID=MS.gene76276 |
| chr1.1 | mRNA | 78571067 | 78571729 | 78571067 | ID=MS.gene76276.t1;Parent=MS.gene76276 |
| chr1.1 | exon | 78571067 | 78571729 | 78571067 | ID=MS.gene76276.t1.exon1;Parent=MS.gene76276.t1 |
| chr1.1 | CDS | 78571067 | 78571729 | 78571067 | ID=cds.MS.gene76276.t1;Parent=MS.gene76276.t1 |
| Gene Sequence |
| Protein sequence |
