Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78878.t1 | XP_003628041.1 | 96.3 | 490 | 17 | 1 | 1 | 489 | 1 | 490 | 2.50E-274 | 954.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78878.t1 | Q5E915 | 70.9 | 485 | 135 | 4 | 1 | 484 | 1 | 480 | 1.8e-196 | 686.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78878.t1 | Q1S5M0 | 96.3 | 490 | 17 | 1 | 1 | 489 | 1 | 490 | 1.8e-274 | 954.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056221 | MS.gene78878 | PPI |
| MS.gene78878 | MS.gene40494 | PPI |
| MS.gene78878 | MS.gene90863 | PPI |
| MS.gene058069 | MS.gene78878 | PPI |
| MS.gene037409 | MS.gene78878 | PPI |
| MS.gene78878 | MS.gene75146 | PPI |
| MS.gene024821 | MS.gene78878 | PPI |
| MS.gene60096 | MS.gene78878 | PPI |
| MS.gene78878 | MS.gene88509 | PPI |
| MS.gene016615 | MS.gene78878 | PPI |
| MS.gene78878 | MS.gene21793 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78878.t1 | MTR_8g041740 | 96.327 | 490 | 17 | 1 | 1 | 489 | 1 | 490 | 0.0 | 968 |
| MS.gene78878.t1 | MTR_8g045440 | 93.061 | 490 | 33 | 1 | 1 | 489 | 1 | 490 | 0.0 | 899 |
| MS.gene78878.t1 | MTR_8g045463 | 89.712 | 486 | 47 | 2 | 7 | 489 | 7 | 492 | 0.0 | 863 |
| MS.gene78878.t1 | MTR_8g045470 | 89.712 | 486 | 47 | 2 | 7 | 489 | 7 | 492 | 0.0 | 863 |
| MS.gene78878.t1 | MTR_8g045440 | 94.045 | 403 | 24 | 0 | 1 | 403 | 1 | 403 | 0.0 | 746 |
| MS.gene78878.t1 | MTR_5g069620 | 73.256 | 86 | 23 | 0 | 38 | 123 | 8 | 93 | 2.05e-37 | 132 |
| MS.gene78878.t1 | MTR_7g086360 | 22.189 | 338 | 203 | 11 | 29 | 362 | 61 | 342 | 3.28e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78878.t1 | AT3G21060 | 71.047 | 487 | 135 | 4 | 1 | 486 | 1 | 482 | 0.0 | 672 |
Find 129 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTATCACTTCCGAAAA+TGG | 0.227326 | 8.3:+56376153 | None:intergenic |
| TGAGTGGAATAGTTTATATC+TGG | 0.238272 | 8.3:-56376574 | MS.gene78878:CDS |
| AGAAGTGATAGAAGAATATT+TGG | 0.247963 | 8.3:-56380276 | MS.gene78878:CDS |
| AAATATTCTTCTATCACTTC+TGG | 0.279839 | 8.3:+56380278 | None:intergenic |
| CTCTTCATCACCACTGAAAC+AGG | 0.280016 | 8.3:+56376748 | None:intergenic |
| TTCATATCCTTGCAGGTAAA+AGG | 0.287426 | 8.3:-56376366 | MS.gene78878:intron |
| AGTGCTCTAACTTCATCTTT+TGG | 0.292327 | 8.3:+56376896 | None:intergenic |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 8.3:+56376515 | None:intergenic |
| CCAGTTCTCAATGTAATCTT+TGG | 0.299795 | 8.3:+56376550 | None:intergenic |
| TAGAAAGTTCTTCAAAGATT+GGG | 0.331449 | 8.3:-56376197 | MS.gene78878:CDS |
| ACCGATAATGGAGTTGTTCA+TGG | 0.343174 | 8.3:+56380488 | None:intergenic |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8.3:+56376627 | None:intergenic |
| ACCGAGGTTCTCGTTAAGTT+TGG | 0.366262 | 8.3:+56376871 | None:intergenic |
| AGGGGAAAACTAACCGATAA+TGG | 0.374362 | 8.3:+56380476 | None:intergenic |
| TTTACTAGCTCGTCTTCATC+CGG | 0.374685 | 8.3:-56377308 | MS.gene78878:CDS |
| CTGTTCAGGAACATCGCAAC+AGG | 0.375964 | 8.3:+56376233 | None:intergenic |
| TTAGAAAGTTCTTCAAAGAT+TGG | 0.378427 | 8.3:-56376198 | MS.gene78878:CDS |
| AATATTCTTCTATCACTTCT+GGG | 0.397781 | 8.3:+56380279 | None:intergenic |
| ATGATGGAAGCTGTGTTGTC+TGG | 0.398052 | 8.3:-56377513 | MS.gene78878:CDS |
| ACTCAAATGATAGAGTTATC+AGG | 0.399586 | 8.3:-56376940 | MS.gene78878:CDS |
| ACCATGAACAACTCCATTAT+CGG | 0.399710 | 8.3:-56380489 | MS.gene78878:intron |
| GGCATGACATTACCTTCAAC+TGG | 0.408445 | 8.3:+56376102 | None:intergenic |
| CGTGCCATGGTTCCTATCTC+TGG | 0.411940 | 8.3:-56377019 | MS.gene78878:CDS |
| TTACTAAAACATGCAGCAAT+AGG | 0.415676 | 8.3:+56377115 | None:intergenic |
| CTGTTGCGATGTTCCTGAAC+AGG | 0.418377 | 8.3:-56376232 | MS.gene78878:CDS |
| GAACACTTGTTGCGTGAGGC+AGG | 0.420528 | 8.3:+56377160 | None:intergenic |
| GTGTTTAAGTCAACAATCAT+TGG | 0.420732 | 8.3:+56377238 | None:intergenic |
| GGTGATGAAGAGTGGGTTGT+TGG | 0.425642 | 8.3:-56376737 | MS.gene78878:CDS |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8.3:+56376648 | None:intergenic |
| AAAGAAACAGATACAACAAT+TGG | 0.427149 | 8.3:+56376596 | None:intergenic |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 8.3:-56376507 | MS.gene78878:CDS |
| ACACTTTGACCAACATATAC+TGG | 0.434902 | 8.3:+56377429 | None:intergenic |
| CTTGTAATTGACAGTAAAGA+TGG | 0.438078 | 8.3:-56377049 | MS.gene78878:CDS |
| ACTACTGAACCACCAGAGAT+AGG | 0.439225 | 8.3:+56377007 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8.3:-56376498 | MS.gene78878:CDS |
| TTACTAGCTCGTCTTCATCC+GGG | 0.444533 | 8.3:-56377307 | MS.gene78878:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.446776 | 8.3:-56376516 | MS.gene78878:CDS |
| TTGTTGCGTGAGGCAGGGTT+TGG | 0.448991 | 8.3:+56377166 | None:intergenic |
| GGGATGTCATGAGTGGTAAA+AGG | 0.453340 | 8.3:-56377360 | MS.gene78878:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.459913 | 8.3:+56377311 | None:intergenic |
| CCAAAGATTACATTGAGAAC+TGG | 0.469225 | 8.3:-56376550 | MS.gene78878:CDS |
| CTCAAAACCATCTCTCTGCT+TGG | 0.473149 | 8.3:-56377281 | MS.gene78878:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8.3:-56376697 | MS.gene78878:CDS |
| CGTCGCGGTACCCTTCTTGC+TGG | 0.478409 | 8.3:-56380221 | MS.gene78878:intron |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8.3:-56377529 | MS.gene78878:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8.3:-56376662 | MS.gene78878:CDS |
| TTTGATTTGAATCCCGAGAC+TGG | 0.485568 | 8.3:-56376461 | MS.gene78878:CDS |
| TTCACATACCTTACCAGTCT+CGG | 0.486703 | 8.3:+56376448 | None:intergenic |
| GTATGGAAACCTGGTTTATG+TGG | 0.490370 | 8.3:-56377092 | MS.gene78878:CDS |
| GAGTGGAATAGTTTATATCT+GGG | 0.493993 | 8.3:-56376573 | MS.gene78878:CDS |
| ATGCAATCACGAAGGTGCAC+TGG | 0.494469 | 8.3:-56376778 | MS.gene78878:CDS |
| GAGAACCTCGGTGATCTAAA+CGG | 0.495173 | 8.3:-56376860 | MS.gene78878:CDS |
| GATGAAGAGTGGGTTGTTGG+TGG | 0.500081 | 8.3:-56376734 | MS.gene78878:CDS |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8.3:+56376628 | None:intergenic |
| GTTGAGAAGTTGAAGGCTGC+AGG | 0.512395 | 8.3:-56376836 | MS.gene78878:CDS |
| TCACATACCTTACCAGTCTC+GGG | 0.512885 | 8.3:+56376449 | None:intergenic |
| TGACCAACATATACTGGTGA+TGG | 0.514154 | 8.3:+56377435 | None:intergenic |
| CGAGCTAGTAAAGGGGTTTG+CGG | 0.516700 | 8.3:+56377319 | None:intergenic |
| GTTGTATCTGTTTCTTTGAG+TGG | 0.520343 | 8.3:-56376590 | MS.gene78878:CDS |
| ACATCGCAACAGGGAGATGC+TGG | 0.520821 | 8.3:+56376243 | None:intergenic |
| GAGGCAGGGTTTGGTCCACT+TGG | 0.522870 | 8.3:+56377175 | None:intergenic |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8.3:+56376638 | None:intergenic |
| GATACAACAATTGGACGTAC+AGG | 0.524448 | 8.3:+56376605 | None:intergenic |
| GGATGAAGACGAGCTAGTAA+AGG | 0.525546 | 8.3:+56377310 | None:intergenic |
| ATATCAGAGTCGCTGAAAGC+AGG | 0.527495 | 8.3:+56376291 | None:intergenic |
| TGAAGAACATTGTATTCAGC+AGG | 0.527995 | 8.3:-56376985 | MS.gene78878:CDS |
| GTTGGTGGTTCTGCTAGTAA+AGG | 0.529338 | 8.3:-56376719 | MS.gene78878:CDS |
| TAGAAGAATATTTGGAACAT+GGG | 0.533699 | 8.3:-56380268 | MS.gene78878:CDS |
| AGAAAGTTCTTCAAAGATTG+GGG | 0.535995 | 8.3:-56376196 | MS.gene78878:CDS |
| CATGCCTCAAGTCCAGTTGA+AGG | 0.538226 | 8.3:-56376114 | MS.gene78878:intron |
| TGATGGAAGCTGTGTTGTCT+GGG | 0.542561 | 8.3:-56377512 | MS.gene78878:CDS |
| TCACGCAACAAGTGTTCTGA+TGG | 0.542864 | 8.3:-56377154 | MS.gene78878:CDS |
| AACACTTGTTGCGTGAGGCA+GGG | 0.547477 | 8.3:+56377161 | None:intergenic |
| AGAGAGAGTTACCAGCAAGA+AGG | 0.548995 | 8.3:+56380210 | None:intergenic |
| ATGTTCCTGAACAGGAAGAC+AGG | 0.549444 | 8.3:-56376224 | MS.gene78878:CDS |
| AAACGGTGTTGAGAAGTTGA+AGG | 0.549513 | 8.3:-56376843 | MS.gene78878:CDS |
| GAGAGAGTTACCAGCAAGAA+GGG | 0.549938 | 8.3:+56380211 | None:intergenic |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8.3:-56376696 | MS.gene78878:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8.3:-56376654 | MS.gene78878:CDS |
| TTTGAATCCCGAGACTGGTA+AGG | 0.560789 | 8.3:-56376456 | MS.gene78878:intron |
| ATTACCTTCAACTGGACTTG+AGG | 0.561076 | 8.3:+56376110 | None:intergenic |
| GTTTCAGTGGTGATGAAGAG+TGG | 0.563391 | 8.3:-56376745 | MS.gene78878:CDS |
| TACTAGCTCGTCTTCATCCG+GGG | 0.567258 | 8.3:-56377306 | MS.gene78878:CDS |
| AAGCTCTTTAGCAATGCCCC+TGG | 0.567723 | 8.3:+56377480 | None:intergenic |
| TACCACTCATGACATCCCAC+AGG | 0.572721 | 8.3:+56377365 | None:intergenic |
| GATTATGAAGATCCGTTGCA+AGG | 0.573855 | 8.3:-56380308 | MS.gene78878:intron |
| AGATGGCGAGGTGCGTGCCA+TGG | 0.575964 | 8.3:-56377032 | MS.gene78878:CDS |
| CTTCAACTGGACTTGAGGCA+TGG | 0.575992 | 8.3:+56376115 | None:intergenic |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 8.3:-56376180 | MS.gene78878:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8.3:-56376758 | MS.gene78878:CDS |
| ACATGCAGCAATAGGTGTGA+AGG | 0.580009 | 8.3:+56377123 | None:intergenic |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8.3:-56376686 | MS.gene78878:CDS |
| GGACACGCCAAGCAGAGAGA+TGG | 0.582568 | 8.3:+56377274 | None:intergenic |
| CTCCCATCACCAGTATATGT+TGG | 0.587070 | 8.3:-56377438 | MS.gene78878:CDS |
| TCGAGTTTCCCACATAAACC+AGG | 0.588345 | 8.3:+56377083 | None:intergenic |
| ATAGAAGAATATTTGGAACA+TGG | 0.588595 | 8.3:-56380269 | MS.gene78878:CDS |
| GACCAACATATACTGGTGAT+GGG | 0.590282 | 8.3:+56377436 | None:intergenic |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 8.3:-56376343 | MS.gene78878:CDS |
| TTTCAGTGGTGATGAAGAGT+GGG | 0.592635 | 8.3:-56376744 | MS.gene78878:CDS |
| TAGATAACATAGCTCTTCCT+CGG | 0.597086 | 8.3:+56376266 | None:intergenic |
| AACATTGTATTCAGCAGGAA+CGG | 0.597939 | 8.3:-56376980 | MS.gene78878:CDS |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8.3:-56376661 | MS.gene78878:CDS |
| ATCAGAACACTTGTTGCGTG+AGG | 0.606314 | 8.3:+56377156 | None:intergenic |
| TATGGAAACCTGGTTTATGT+GGG | 0.609917 | 8.3:-56377091 | MS.gene78878:CDS |
| GCCATGGTTCCTATCTCTGG+TGG | 0.613251 | 8.3:-56377016 | MS.gene78878:CDS |
| TGACAAGTCGTTATCCCTGT+GGG | 0.614779 | 8.3:-56377380 | MS.gene78878:CDS |
| TGACATTGTGACAGTCGAGA+AGG | 0.620507 | 8.3:-56376316 | MS.gene78878:CDS |
| CTGACAAGTCGTTATCCCTG+TGG | 0.627369 | 8.3:-56377381 | MS.gene78878:CDS |
| GTTTATGTGGGAAACTCGAA+AGG | 0.631466 | 8.3:-56377079 | MS.gene78878:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8.3:+56376792 | None:intergenic |
| ATCATTGGAGCACATGAGAG+AGG | 0.635797 | 8.3:+56377253 | None:intergenic |
| TCTGGGAAATCACCTTGCAA+CGG | 0.637632 | 8.3:+56380296 | None:intergenic |
| TCTTCATCACCACTGAAACA+GGG | 0.640101 | 8.3:+56376749 | None:intergenic |
| TCTGTCTCTGAGAAACCAAG+TGG | 0.649281 | 8.3:-56377190 | MS.gene78878:CDS |
| ACCACTCATGACATCCCACA+GGG | 0.650263 | 8.3:+56377366 | None:intergenic |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8.3:-56376631 | MS.gene78878:CDS |
| TGCAGCAATAGGTGTGAAGG+AGG | 0.657772 | 8.3:+56377126 | None:intergenic |
| AATCACGAAGGTGCACTGGA+AGG | 0.658692 | 8.3:-56376774 | MS.gene78878:CDS |
| AGTATATGTTGGTCAAAGTG+TGG | 0.660275 | 8.3:-56377427 | MS.gene78878:CDS |
| CAGCGACTCTGATATGTCCG+AGG | 0.661449 | 8.3:-56376283 | MS.gene78878:CDS |
| ACCACCAGAGATAGGAACCA+TGG | 0.676109 | 8.3:+56377015 | None:intergenic |
| AATTGACAGTAAAGATGGCG+AGG | 0.678617 | 8.3:-56377044 | MS.gene78878:CDS |
| TGTTCAGGAACATCGCAACA+GGG | 0.685237 | 8.3:+56376234 | None:intergenic |
| TCCCTGTGGGATGTCATGAG+TGG | 0.693869 | 8.3:-56377367 | MS.gene78878:CDS |
| TGTATTGCTTTCAATCGTCG+CGG | 0.697076 | 8.3:-56380236 | MS.gene78878:CDS |
| GCCAAACTTAACGAGAACCT+CGG | 0.703007 | 8.3:-56376872 | MS.gene78878:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 8.3:+56377312 | None:intergenic |
| GTTTCAAGATGCAATCACGA+AGG | 0.735993 | 8.3:-56376786 | MS.gene78878:CDS |
| CAACACCGTTTAGATCACCG+AGG | 0.770889 | 8.3:+56376855 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATTAATATTAATTA+TGG | - | chr8.3:56376213-56376232 | MS.gene78878:CDS | 0.0% |
| !!! | AATAATAAGTATTGAAAAAT+TGG | + | chr8.3:56376108-56376127 | None:intergenic | 10.0% |
| !!! | ATAATAAGTATTGAAAAATT+GGG | + | chr8.3:56376107-56376126 | None:intergenic | 10.0% |
| !!! | ATTTTTCAATACTTATTATT+AGG | - | chr8.3:56376108-56376127 | MS.gene78878:intron | 10.0% |
| !!! | TTTTTCAATACTTATTATTA+GGG | - | chr8.3:56376109-56376128 | MS.gene78878:intron | 10.0% |
| !! | GTATTTAATCTGTATATTTA+AGG | - | chr8.3:56377972-56377991 | MS.gene78878:intron | 15.0% |
| !! | TATAAAGTAAATAAGCTTTA+GGG | + | chr8.3:56377712-56377731 | None:intergenic | 15.0% |
| !! | TGTAGTTATATCAAATTTAT+AGG | - | chr8.3:56376446-56376465 | MS.gene78878:intron | 15.0% |
| !! | TTATAAAGTAAATAAGCTTT+AGG | + | chr8.3:56377713-56377732 | None:intergenic | 15.0% |
| !!! | AAATTCTAGCATTTTAATTT+GGG | - | chr8.3:56377372-56377391 | MS.gene78878:CDS | 15.0% |
| !!! | ACTTTATTTATTTTCATTGT+GGG | - | chr8.3:56378779-56378798 | MS.gene78878:intron | 15.0% |
| !!! | TACTTTATTTATTTTCATTG+TGG | - | chr8.3:56378778-56378797 | MS.gene78878:intron | 15.0% |
| !! | ATGTAGATCTTAGAATATTT+AGG | - | chr8.3:56377949-56377968 | MS.gene78878:intron | 20.0% |
| !! | TAAAAAACGTTTAGAAGAAT+AGG | + | chr8.3:56376146-56376165 | None:intergenic | 20.0% |
| !! | TAATAATGAACTTTGATCAT+TGG | - | chr8.3:56377749-56377768 | MS.gene78878:intron | 20.0% |
| !! | TCATTACATTACAATAGAAT+TGG | + | chr8.3:56378351-56378370 | None:intergenic | 20.0% |
| !! | TGATAAAAAGATTAGAAGAA+CGG | + | chr8.3:56378621-56378640 | None:intergenic | 20.0% |
| !! | TGTAGATCTTAGAATATTTA+GGG | - | chr8.3:56377950-56377969 | MS.gene78878:intron | 20.0% |
| !! | TTATATTGTATTAACACACA+TGG | + | chr8.3:56377820-56377839 | None:intergenic | 20.0% |
| !!! | ATAAACTTTATTCTGTTTTC+TGG | - | chr8.3:56378324-56378343 | MS.gene78878:intron | 20.0% |
| !!! | CAAATTCTAGCATTTTAATT+TGG | - | chr8.3:56377371-56377390 | MS.gene78878:CDS | 20.0% |
| !!! | GGTATTTTCAAAAAATCATT+AGG | - | chr8.3:56378499-56378518 | MS.gene78878:intron | 20.0% |
| !!! | TAAATATTCTAAGATCTACA+TGG | + | chr8.3:56377950-56377969 | None:intergenic | 20.0% |
| !!! | TTCATTAAACTTTAAAGTAG+TGG | - | chr8.3:56377854-56377873 | MS.gene78878:intron | 20.0% |
| !!! | TTCTTTCCTTTTCAATTTTA+TGG | - | chr8.3:56380149-56380168 | MS.gene78878:intron | 20.0% |
| !!! | TTGCTGATTAAAAAAAAGAA+GGG | - | chr8.3:56377177-56377196 | MS.gene78878:CDS | 20.0% |
| !!! | TTTGCTGATTAAAAAAAAGA+AGG | - | chr8.3:56377176-56377195 | MS.gene78878:CDS | 20.0% |
| ! | AAAGAAACAGATACAACAAT+TGG | + | chr8.3:56379956-56379975 | None:intergenic | 25.0% |
| ! | AAATATTCTTCTATCACTTC+TGG | + | chr8.3:56376274-56376293 | None:intergenic | 25.0% |
| ! | AATATTCTTCTATCACTTCT+GGG | + | chr8.3:56376273-56376292 | None:intergenic | 25.0% |
| ! | AATTATAGCCATAACTACAA+GGG | + | chr8.3:56378058-56378077 | None:intergenic | 25.0% |
| ! | AGAAGTGATAGAAGAATATT+TGG | - | chr8.3:56376273-56376292 | MS.gene78878:CDS | 25.0% |
| ! | ATTTGATAAATTGAATCAGC+TGG | - | chr8.3:56379008-56379027 | MS.gene78878:intron | 25.0% |
| ! | CATAACTTGAGAGAAAAATT+GGG | + | chr8.3:56377680-56377699 | None:intergenic | 25.0% |
| ! | CTTGAAACTTTACTGTATAA+TGG | - | chr8.3:56376865-56376884 | MS.gene78878:CDS | 25.0% |
| ! | GTAGTTGACAATAAAGAAAT+AGG | + | chr8.3:56378648-56378667 | None:intergenic | 25.0% |
| ! | GTTTGAACCTTATGAATATT+CGG | - | chr8.3:56376602-56376621 | MS.gene78878:CDS | 25.0% |
| ! | TAAATCTATACCATCGTTAA+TGG | + | chr8.3:56378571-56378590 | None:intergenic | 25.0% |
| ! | TAAATTTGCATTTGAATGTG+TGG | - | chr8.3:56378896-56378915 | MS.gene78878:intron | 25.0% |
| ! | TAGAAAGTTCTTCAAAGATT+GGG | - | chr8.3:56380352-56380371 | MS.gene78878:intron | 25.0% |
| ! | TCTATATCACATTGATACTA+GGG | - | chr8.3:56378281-56378300 | MS.gene78878:intron | 25.0% |
| ! | TGAATTCCTTGTAGTTATTA+GGG | - | chr8.3:56376700-56376719 | MS.gene78878:CDS | 25.0% |
| ! | TGATAGTATGGAAAGTAAAA+AGG | - | chr8.3:56378411-56378430 | MS.gene78878:intron | 25.0% |
| ! | TTAGAAAGTTCTTCAAAGAT+TGG | - | chr8.3:56380351-56380370 | MS.gene78878:intron | 25.0% |
| ! | TTGAGACCATAAAATTGAAA+AGG | + | chr8.3:56380158-56380177 | None:intergenic | 25.0% |
| ! | TTTGAACCTTATGAATATTC+GGG | - | chr8.3:56376603-56376622 | MS.gene78878:CDS | 25.0% |
| !! | AAATTTATAGGATTTTACCG+AGG | - | chr8.3:56376458-56376477 | MS.gene78878:CDS | 25.0% |
| !! | ACAGATTATTTTCATTCCTA+AGG | - | chr8.3:56380488-56380507 | MS.gene78878:intron | 25.0% |
| !! | ATAGAAGAATATTTGGAACA+TGG | - | chr8.3:56376280-56376299 | MS.gene78878:CDS | 25.0% |
| !! | CCTAACATTTTTCCTAATTA+GGG | + | chr8.3:56378009-56378028 | None:intergenic | 25.0% |
| !! | GTATACTCAGAAAGTTTTTA+CGG | + | chr8.3:56378761-56378780 | None:intergenic | 25.0% |
| !! | TAGAAGAATATTTGGAACAT+GGG | - | chr8.3:56376281-56376300 | MS.gene78878:CDS | 25.0% |
| !! | TCATTGGTTATGAATATCAT+TGG | - | chr8.3:56377765-56377784 | MS.gene78878:intron | 25.0% |
| !! | TCCTAACATTTTTCCTAATT+AGG | + | chr8.3:56378010-56378029 | None:intergenic | 25.0% |
| !! | TCTGTATATTTAAGGTCAAT+TGG | - | chr8.3:56377980-56377999 | MS.gene78878:intron | 25.0% |
| !! | TTGCTATTGATATGATAGTA+TGG | - | chr8.3:56378399-56378418 | MS.gene78878:intron | 25.0% |
| !!! | AAAGGTATTGTTTATGACAA+TGG | - | chr8.3:56378429-56378448 | MS.gene78878:intron | 25.0% |
| !!! | TAAATAAGCTTTAGGGAAAA+AGG | + | chr8.3:56377705-56377724 | None:intergenic | 25.0% |
| !!! | TGTTACAAGCATATTTTGAA+AGG | + | chr8.3:56380471-56380490 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAATACCGAAGT+TGG | + | chr8.3:56378494-56378513 | None:intergenic | 25.0% |
| AAAAATTGGGAGAAGAAAAG+GGG | + | chr8.3:56376094-56376113 | None:intergenic | 30.0% | |
| AAACGTTTAGAAGAATAGGA+AGG | + | chr8.3:56376142-56376161 | None:intergenic | 30.0% | |
| AAACTCATCTCAAAAGGTTT+AGG | + | chr8.3:56378670-56378689 | None:intergenic | 30.0% | |
| AAGGAACAAACACAATATAG+GGG | + | chr8.3:56377107-56377126 | None:intergenic | 30.0% | |
| ACAAGGAACAAACACAATAT+AGG | + | chr8.3:56377109-56377128 | None:intergenic | 30.0% | |
| ACCCACAAATTGGATAAAAA+CGG | + | chr8.3:56376999-56377018 | None:intergenic | 30.0% | |
| ACTCAAATGATAGAGTTATC+AGG | - | chr8.3:56379609-56379628 | MS.gene78878:intron | 30.0% | |
| AGAAAGTTCTTCAAAGATTG+GGG | - | chr8.3:56380353-56380372 | MS.gene78878:intron | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr8.3:56379853-56379872 | MS.gene78878:intron | 30.0% | |
| AGTATCAATGTGATATAGAG+CGG | + | chr8.3:56378280-56378299 | None:intergenic | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr8.3:56379888-56379907 | MS.gene78878:intron | 30.0% | |
| CAAGGAACAAACACAATATA+GGG | + | chr8.3:56377108-56377127 | None:intergenic | 30.0% | |
| CAATTATAGCCATAACTACA+AGG | + | chr8.3:56378059-56378078 | None:intergenic | 30.0% | |
| CCAAATAAAAACAGTGTGAA+TGG | + | chr8.3:56376841-56376860 | None:intergenic | 30.0% | |
| CCATAACTTGAGAGAAAAAT+TGG | + | chr8.3:56377681-56377700 | None:intergenic | 30.0% | |
| CCCTAATTAGGAAAAATGTT+AGG | - | chr8.3:56378006-56378025 | MS.gene78878:intron | 30.0% | |
| CTCTATATCACATTGATACT+AGG | - | chr8.3:56378280-56378299 | MS.gene78878:intron | 30.0% | |
| CTTGTAATTGACAGTAAAGA+TGG | - | chr8.3:56379500-56379519 | MS.gene78878:intron | 30.0% | |
| GAAAAATTGGGAGAAGAAAA+GGG | + | chr8.3:56376095-56376114 | None:intergenic | 30.0% | |
| GAATTCCTTGTAGTTATTAG+GGG | - | chr8.3:56376701-56376720 | MS.gene78878:CDS | 30.0% | |
| GAGTGGAATAGTTTATATCT+GGG | - | chr8.3:56379976-56379995 | MS.gene78878:intron | 30.0% | |
| GCTATAATTGATGCTGAATT+AGG | - | chr8.3:56378069-56378088 | MS.gene78878:intron | 30.0% | |
| GTGAATTCCTTGTAGTTATT+AGG | - | chr8.3:56376699-56376718 | MS.gene78878:CDS | 30.0% | |
| GTGTTTAAGTCAACAATCAT+TGG | + | chr8.3:56379314-56379333 | None:intergenic | 30.0% | |
| TAAGGTATGTGAACGTTATA+TGG | - | chr8.3:56380111-56380130 | MS.gene78878:intron | 30.0% | |
| TATTCTCCTTCTATGCTAAT+TGG | + | chr8.3:56377615-56377634 | None:intergenic | 30.0% | |
| TGAAAAATTGGGAGAAGAAA+AGG | + | chr8.3:56376096-56376115 | None:intergenic | 30.0% | |
| TGAGTGGAATAGTTTATATC+TGG | - | chr8.3:56379975-56379994 | MS.gene78878:intron | 30.0% | |
| TTACTAAAACATGCAGCAAT+AGG | + | chr8.3:56379437-56379456 | None:intergenic | 30.0% | |
| TTAGGCTGTAAACATTCAAA+TGG | - | chr8.3:56378517-56378536 | MS.gene78878:intron | 30.0% | |
| TTAGTGAGTGTATATCTTTC+TGG | - | chr8.3:56378823-56378842 | MS.gene78878:intron | 30.0% | |
| ! | ACTATACAGCTATAGCATTT+TGG | - | chr8.3:56377891-56377910 | MS.gene78878:intron | 30.0% |
| ! | CCAATTTTTCTCTCAAGTTA+TGG | - | chr8.3:56377678-56377697 | MS.gene78878:intron | 30.0% |
| ! | TTTTACCGAGGTTTATATTG+TGG | - | chr8.3:56376470-56376489 | MS.gene78878:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | - | chr8.3:56379448-56379467 | MS.gene78878:intron | 30.0% |
| !! | AATAACTTGAGGGCATATTT+TGG | + | chr8.3:56376817-56376836 | None:intergenic | 30.0% |
| !! | AGTTTGGTTTGGAAAGAATT+AGG | - | chr8.3:56376410-56376429 | MS.gene78878:intron | 30.0% |
| !!! | CCATTCACACTGTTTTTATT+TGG | - | chr8.3:56376838-56376857 | MS.gene78878:CDS | 30.0% |
| !!! | TAAACCTTTTGAGATGAGTT+TGG | - | chr8.3:56378669-56378688 | MS.gene78878:intron | 30.0% |
| AAATCAATAAGGGCTTCCTT+AGG | + | chr8.3:56379914-56379933 | None:intergenic | 35.0% | |
| AACATTGTATTCAGCAGGAA+CGG | - | chr8.3:56379569-56379588 | MS.gene78878:intron | 35.0% | |
| AATTTCCGTAGTTTCTGTCA+AGG | - | chr8.3:56378174-56378193 | MS.gene78878:intron | 35.0% | |
| ACACTTTGACCAACATATAC+TGG | + | chr8.3:56379123-56379142 | None:intergenic | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr8.3:56378986-56379005 | None:intergenic | 35.0% | |
| AGTATATGTTGGTCAAAGTG+TGG | - | chr8.3:56379122-56379141 | MS.gene78878:intron | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | - | chr8.3:56380206-56380225 | MS.gene78878:intron | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | + | chr8.3:56379924-56379943 | None:intergenic | 35.0% | |
| ATGTGCACTTTGTAAGTCTT+GGG | - | chr8.3:56377035-56377054 | MS.gene78878:CDS | 35.0% | |
| ATTTACATATGGGATAGAGC+TGG | - | chr8.3:56379863-56379882 | MS.gene78878:intron | 35.0% | |
| CAAAACATTGAGCTTGAATC+TGG | - | chr8.3:56377224-56377243 | MS.gene78878:CDS | 35.0% | |
| CAATCGTGTTAATCTGCAAT+TGG | + | chr8.3:56378136-56378155 | None:intergenic | 35.0% | |
| CAATTGCAGATTAACACGAT+TGG | - | chr8.3:56378134-56378153 | MS.gene78878:intron | 35.0% | |
| CAGAAAAAACACACCCAAAT+CGG | + | chr8.3:56376938-56376957 | None:intergenic | 35.0% | |
| CAGAAACCCGAATATTCATA+AGG | + | chr8.3:56376612-56376631 | None:intergenic | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr8.3:56379887-56379906 | MS.gene78878:intron | 35.0% | |
| CCAAAGATTACATTGAGAAC+TGG | - | chr8.3:56379999-56380018 | MS.gene78878:intron | 35.0% | |
| CCAGTTCTCAATGTAATCTT+TGG | + | chr8.3:56380002-56380021 | None:intergenic | 35.0% | |
| CTGTTAATTGCTACAGAGAT+AGG | + | chr8.3:56377554-56377573 | None:intergenic | 35.0% | |
| GATTAACACCCTTGTAGTTA+TGG | - | chr8.3:56378047-56378066 | MS.gene78878:intron | 35.0% | |
| GGAAAAAAACACCCACAAAT+TGG | + | chr8.3:56377009-56377028 | None:intergenic | 35.0% | |
| TACTGTGACAGCAACAATAA+TGG | - | chr8.3:56376580-56376599 | MS.gene78878:CDS | 35.0% | |
| TAGATAACATAGCTCTTCCT+CGG | + | chr8.3:56380286-56380305 | None:intergenic | 35.0% | |
| TATAGCTGTATAGTCTGTAG+CGG | + | chr8.3:56377885-56377904 | None:intergenic | 35.0% | |
| TATGGAAACCTGGTTTATGT+GGG | - | chr8.3:56379458-56379477 | MS.gene78878:intron | 35.0% | |
| TATTCCTCTGCTATGCTATT+TGG | + | chr8.3:56376755-56376774 | None:intergenic | 35.0% | |
| TCAAACCTTGACAGAAACTA+CGG | + | chr8.3:56378182-56378201 | None:intergenic | 35.0% | |
| TCATTGTGGGATTAGATTTC+AGG | - | chr8.3:56378792-56378811 | MS.gene78878:intron | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | - | chr8.3:56380033-56380052 | MS.gene78878:intron | 35.0% | |
| TCTACATGGTCAATGAAGAA+TGG | + | chr8.3:56377936-56377955 | None:intergenic | 35.0% | |
| TCTCCACACAAAAATTTACC+AGG | + | chr8.3:56377449-56377468 | None:intergenic | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | - | chr8.3:56379564-56379583 | MS.gene78878:intron | 35.0% | |
| TGATTGCATCTTGAAACTCA+CGG | + | chr8.3:56379760-56379779 | None:intergenic | 35.0% | |
| TGTGAATGGCAATAACTTGA+GGG | + | chr8.3:56376827-56376846 | None:intergenic | 35.0% | |
| TTCATATCCTTGCAGGTAAA+AGG | - | chr8.3:56380183-56380202 | MS.gene78878:intron | 35.0% | |
| TTCTGTGATACCATTAACGA+TGG | - | chr8.3:56378558-56378577 | MS.gene78878:intron | 35.0% | |
| TTGACCAAACTCATCTCAAA+AGG | + | chr8.3:56378676-56378695 | None:intergenic | 35.0% | |
| TTGCATTTGAATGTGTGGAT+TGG | - | chr8.3:56378901-56378920 | MS.gene78878:intron | 35.0% | |
| ! | AAAATACCCTTGCTGTAGTT+TGG | - | chr8.3:56376394-56376413 | MS.gene78878:intron | 35.0% |
| ! | AGTGCTCTAACTTCATCTTT+TGG | + | chr8.3:56379656-56379675 | None:intergenic | 35.0% |
| ! | ATACAGCTATAGCATTTTGG+TGG | - | chr8.3:56377894-56377913 | MS.gene78878:intron | 35.0% |
| ! | CAAGGTTTGAAGTGTGTATA+AGG | - | chr8.3:56378192-56378211 | MS.gene78878:intron | 35.0% |
| ! | GAGAGCACAAGATTTACATA+TGG | - | chr8.3:56379852-56379871 | MS.gene78878:intron | 35.0% |
| ! | GTTGTATCTGTTTCTTTGAG+TGG | - | chr8.3:56379959-56379978 | MS.gene78878:intron | 35.0% |
| ! | GTTTGAAGTGTGTATAAGGA+GGG | - | chr8.3:56378196-56378215 | MS.gene78878:intron | 35.0% |
| ! | GTTTTACGGTAATCCAACTT+CGG | - | chr8.3:56378478-56378497 | MS.gene78878:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr8.3:56380383-56380402 | MS.gene78878:intron | 35.0% |
| ! | TTTGCTATCACTTCCGAAAA+TGG | + | chr8.3:56380399-56380418 | None:intergenic | 35.0% |
| ! | TTTTCGGAAGTGATAGCAAA+TGG | - | chr8.3:56380399-56380418 | MS.gene78878:intron | 35.0% |
| !! | CTATAGCATTTTGGTGGTTT+TGG | - | chr8.3:56377900-56377919 | MS.gene78878:intron | 35.0% |
| !! | GAGATTTGTTCCTCGTTTTA+CGG | - | chr8.3:56378464-56378483 | MS.gene78878:intron | 35.0% |
| !! | TAAGCTGATTTTGTACGCAA+TGG | - | chr8.3:56377471-56377490 | MS.gene78878:CDS | 35.0% |
| !! | TCCTCAATCTCTTTGAAATC+AGG | + | chr8.3:56380037-56380056 | None:intergenic | 35.0% |
| !! | TGGCTTTTTCCAATGATGAT+GGG | - | chr8.3:56377338-56377357 | MS.gene78878:CDS | 35.0% |
| !!! | AAACTACAGCAAGGGTATTT+TGG | + | chr8.3:56376395-56376414 | None:intergenic | 35.0% |
| !!! | AGCCGTTTTTATCCAATTTG+TGG | - | chr8.3:56376994-56377013 | MS.gene78878:CDS | 35.0% |
| !!! | ATTTGGGTGTGTTTTTTCTG+TGG | - | chr8.3:56376938-56376957 | MS.gene78878:CDS | 35.0% |
| !!! | GCCGTTTTTATCCAATTTGT+GGG | - | chr8.3:56376995-56377014 | MS.gene78878:CDS | 35.0% |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | - | chr8.3:56379440-56379459 | MS.gene78878:intron | 35.0% |
| AAAAACACACCCAAATCGGT+AGG | + | chr8.3:56376934-56376953 | None:intergenic | 40.0% | |
| AAAAACCTGTCTTCCTGTTC+AGG | + | chr8.3:56380333-56380352 | None:intergenic | 40.0% | |
| AACCAAGTTCATATCCTTGC+AGG | - | chr8.3:56380176-56380195 | MS.gene78878:intron | 40.0% | |
| AATTGACAGTAAAGATGGCG+AGG | - | chr8.3:56379505-56379524 | MS.gene78878:intron | 40.0% | |
| AATTGCTACAGAGATAGGCT+TGG | + | chr8.3:56377549-56377568 | None:intergenic | 40.0% | |
| ACATGGTCAATGAAGAATGG+CGG | + | chr8.3:56377933-56377952 | None:intergenic | 40.0% | |
| ACCGAAATTCAGAAAGGGAA+AGG | + | chr8.3:56377082-56377101 | None:intergenic | 40.0% | |
| ACGGAAATTGAGACCTTACA+GGG | + | chr8.3:56378163-56378182 | None:intergenic | 40.0% | |
| AGCTTGAATCTGGACTTGAT+TGG | - | chr8.3:56377234-56377253 | MS.gene78878:CDS | 40.0% | |
| AGGGGAAAACTAACCGATAA+TGG | + | chr8.3:56376076-56376095 | None:intergenic | 40.0% | |
| AGTTGGATTACCGTAAAACG+AGG | + | chr8.3:56378477-56378496 | None:intergenic | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | + | chr8.3:56379240-56379259 | None:intergenic | 40.0% | |
| ATTACCTTCAACTGGACTTG+AGG | + | chr8.3:56380442-56380461 | None:intergenic | 40.0% | |
| ATTTACCAGGCTGCTCTATT+TGG | + | chr8.3:56377436-56377455 | None:intergenic | 40.0% | |
| CAAGACTTACAAAGTGCACA+TGG | + | chr8.3:56377036-56377055 | None:intergenic | 40.0% | |
| CACTTTGTAAGTCTTGGGAT+TGG | - | chr8.3:56377040-56377059 | MS.gene78878:CDS | 40.0% | |
| CATGTGCACTTTGTAAGTCT+TGG | - | chr8.3:56377034-56377053 | MS.gene78878:CDS | 40.0% | |
| CGCAACCACAATATAAACCT+CGG | + | chr8.3:56376478-56376497 | None:intergenic | 40.0% | |
| CTTCACATCGTTGAGAATTG+TGG | - | chr8.3:56376506-56376525 | MS.gene78878:CDS | 40.0% | |
| GACCAACATATACTGGTGAT+GGG | + | chr8.3:56379116-56379135 | None:intergenic | 40.0% | |
| GATACAACAATTGGACGTAC+AGG | + | chr8.3:56379947-56379966 | None:intergenic | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | + | chr8.3:56379241-56379260 | None:intergenic | 40.0% | |
| GATGCCACGCTAAATCAATA+AGG | + | chr8.3:56379925-56379944 | None:intergenic | 40.0% | |
| GATTATGAAGATCCGTTGCA+AGG | - | chr8.3:56376241-56376260 | MS.gene78878:CDS | 40.0% | |
| GCAATTAACAGCTCCTATAG+TGG | - | chr8.3:56377563-56377582 | MS.gene78878:intron | 40.0% | |
| GCCTTTCCCTTTCTGAATTT+CGG | - | chr8.3:56377078-56377097 | MS.gene78878:CDS | 40.0% | |
| GCTTGAATCTGGACTTGATT+GGG | - | chr8.3:56377235-56377254 | MS.gene78878:CDS | 40.0% | |
| GGGTTTCTGCTTATGATTGT+GGG | - | chr8.3:56376623-56376642 | MS.gene78878:CDS | 40.0% | |
| GGTTTATATTGTGGTTGCGT+CGG | - | chr8.3:56376479-56376498 | MS.gene78878:CDS | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | - | chr8.3:56379457-56379476 | MS.gene78878:intron | 40.0% | |
| GTCAATTGGTTGCCCTAATT+AGG | - | chr8.3:56377994-56378013 | MS.gene78878:intron | 40.0% | |
| GTGTGAATGGCAATAACTTG+AGG | + | chr8.3:56376828-56376847 | None:intergenic | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | - | chr8.3:56379470-56379489 | MS.gene78878:intron | 40.0% | |
| GTTTCAAGATGCAATCACGA+AGG | - | chr8.3:56379763-56379782 | MS.gene78878:intron | 40.0% | |
| TACCTGCAAGGATATGAACT+TGG | + | chr8.3:56380181-56380200 | None:intergenic | 40.0% | |
| TACGGAAATTGAGACCTTAC+AGG | + | chr8.3:56378164-56378183 | None:intergenic | 40.0% | |
| TCACAAGAACTTCACTGTAG+CGG | + | chr8.3:56376791-56376810 | None:intergenic | 40.0% | |
| TCCAAACCAAACTACAGCAA+GGG | + | chr8.3:56376403-56376422 | None:intergenic | 40.0% | |
| TCTTCATCACCACTGAAACA+GGG | + | chr8.3:56379803-56379822 | None:intergenic | 40.0% | |
| TGACCAACATATACTGGTGA+TGG | + | chr8.3:56379117-56379136 | None:intergenic | 40.0% | |
| TGTATTGCTTTCAATCGTCG+CGG | - | chr8.3:56376313-56376332 | MS.gene78878:CDS | 40.0% | |
| TTAATCTGCAATTGGCAGAG+TGG | + | chr8.3:56378128-56378147 | None:intergenic | 40.0% | |
| TTACAAAGTGCACATGGTCA+AGG | + | chr8.3:56377030-56377049 | None:intergenic | 40.0% | |
| TTCACATACCTTACCAGTCT+CGG | + | chr8.3:56380104-56380123 | None:intergenic | 40.0% | |
| TTCCAAACCAAACTACAGCA+AGG | + | chr8.3:56376404-56376423 | None:intergenic | 40.0% | |
| TTGTGGGATTAGATTTCAGG+AGG | - | chr8.3:56378795-56378814 | MS.gene78878:intron | 40.0% | |
| TTTACTAGCTCGTCTTCATC+CGG | - | chr8.3:56379241-56379260 | MS.gene78878:intron | 40.0% | |
| ! | AAACGGTGTTGAGAAGTTGA+AGG | - | chr8.3:56379706-56379725 | MS.gene78878:intron | 40.0% |
| ! | ATCAGATCCTTTTACCTGCA+AGG | + | chr8.3:56380193-56380212 | None:intergenic | 40.0% |
| ! | CAGCCTGGTAAATTTTTGTG+TGG | - | chr8.3:56377443-56377462 | MS.gene78878:CDS | 40.0% |
| ! | GCTCTAACTTCATCTTTTGG+AGG | + | chr8.3:56379653-56379672 | None:intergenic | 40.0% |
| ! | GGTTTGAAGTGTGTATAAGG+AGG | - | chr8.3:56378195-56378214 | MS.gene78878:intron | 40.0% |
| ! | TTTCAGTGGTGATGAAGAGT+GGG | - | chr8.3:56379805-56379824 | MS.gene78878:intron | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | - | chr8.3:56379918-56379937 | MS.gene78878:intron | 40.0% |
| !! | CAAGGGTGTTAATCTGCAAA+TGG | + | chr8.3:56378041-56378060 | None:intergenic | 40.0% |
| !! | CTGGCTTTTTCCAATGATGA+TGG | - | chr8.3:56377337-56377356 | MS.gene78878:CDS | 40.0% |
| !! | GGCTTTTTCCAATGATGATG+GGG | - | chr8.3:56377339-56377358 | MS.gene78878:CDS | 40.0% |
| !! | TTTGATTTGAATCCCGAGAC+TGG | - | chr8.3:56380088-56380107 | MS.gene78878:intron | 40.0% |
| !!! | CAGAGTGGATTGTGGATTTT+CGG | + | chr8.3:56378113-56378132 | None:intergenic | 40.0% |
| !!! | GCTTTTTCCAATGATGATGG+GGG | - | chr8.3:56377340-56377359 | MS.gene78878:CDS | 40.0% |
| !!! | TGTCTGGGATTTTGAAACCA+GGG | - | chr8.3:56379052-56379071 | MS.gene78878:intron | 40.0% |
| !!! | TTGTCTGGGATTTTGAAACC+AGG | - | chr8.3:56379051-56379070 | MS.gene78878:intron | 40.0% |
| ACATAGACCCCCATCATCAT+TGG | + | chr8.3:56377350-56377369 | None:intergenic | 45.0% | |
| ACATGCAGCAATAGGTGTGA+AGG | + | chr8.3:56379429-56379448 | None:intergenic | 45.0% | |
| ACCGAGGTTCTCGTTAAGTT+TGG | + | chr8.3:56379681-56379700 | None:intergenic | 45.0% | |
| ACTACTGAACCACCAGAGAT+AGG | + | chr8.3:56379545-56379564 | None:intergenic | 45.0% | |
| AGAGAGAGTTACCAGCAAGA+AGG | + | chr8.3:56376342-56376361 | None:intergenic | 45.0% | |
| AGCAGCCCCTAATAACTACA+AGG | + | chr8.3:56376709-56376728 | None:intergenic | 45.0% | |
| ATATCAGAGTCGCTGAAAGC+AGG | + | chr8.3:56380261-56380280 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | + | chr8.3:56379299-56379318 | None:intergenic | 45.0% | |
| ATGTTCCTGAACAGGAAGAC+AGG | - | chr8.3:56380325-56380344 | MS.gene78878:intron | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | - | chr8.3:56380369-56380388 | MS.gene78878:intron | 45.0% | |
| CACTATCTATCTCATACCCC+AGG | + | chr8.3:56378243-56378262 | None:intergenic | 45.0% | |
| CCCAAGAACCCCAAATCTAA+GGG | + | chr8.3:56376972-56376991 | None:intergenic | 45.0% | |
| CGGGTTTCTGCTTATGATTG+TGG | - | chr8.3:56376622-56376641 | MS.gene78878:CDS | 45.0% | |
| CTCAAAACCATCTCTCTGCT+TGG | - | chr8.3:56379268-56379287 | MS.gene78878:intron | 45.0% | |
| CTCCCATCACCAGTATATGT+TGG | - | chr8.3:56379111-56379130 | MS.gene78878:intron | 45.0% | |
| CTCTTCATCACCACTGAAAC+AGG | + | chr8.3:56379804-56379823 | None:intergenic | 45.0% | |
| CTGTATAGTCTGTAGCGGTA+TGG | + | chr8.3:56377880-56377899 | None:intergenic | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr8.3:56379895-56379914 | MS.gene78878:intron | 45.0% | |
| GACTGTGAGTTCCATTGACA+CGG | - | chr8.3:56377277-56377296 | MS.gene78878:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+CGG | - | chr8.3:56379689-56379708 | MS.gene78878:intron | 45.0% | |
| GAGAGAGTTACCAGCAAGAA+GGG | + | chr8.3:56376341-56376360 | None:intergenic | 45.0% | |
| GCCAAACTTAACGAGAACCT+CGG | - | chr8.3:56379677-56379696 | MS.gene78878:intron | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | + | chr8.3:56379242-56379261 | None:intergenic | 45.0% | |
| GGCATGACATTACCTTCAAC+TGG | + | chr8.3:56380450-56380469 | None:intergenic | 45.0% | |
| GGGATGTCATGAGTGGTAAA+AGG | - | chr8.3:56379189-56379208 | MS.gene78878:intron | 45.0% | |
| GGGCAACCGAAATTCAGAAA+GGG | + | chr8.3:56377087-56377106 | None:intergenic | 45.0% | |
| GTTATTAGGGGCTGCTATAG+CGG | - | chr8.3:56376713-56376732 | MS.gene78878:CDS | 45.0% | |
| TCACATACCTTACCAGTCTC+GGG | + | chr8.3:56380103-56380122 | None:intergenic | 45.0% | |
| TCACGCAACAAGTGTTCTGA+TGG | - | chr8.3:56379395-56379414 | MS.gene78878:intron | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | + | chr8.3:56379469-56379488 | None:intergenic | 45.0% | |
| TCTATGTCTCCTGGATACCT+GGG | - | chr8.3:56378223-56378242 | MS.gene78878:intron | 45.0% | |
| TCTGGGAAATCACCTTGCAA+CGG | + | chr8.3:56376256-56376275 | None:intergenic | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | - | chr8.3:56379169-56379188 | MS.gene78878:intron | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | - | chr8.3:56380233-56380252 | MS.gene78878:CDS | 45.0% | |
| TGATGGAAGCTGTGTTGTCT+GGG | - | chr8.3:56379037-56379056 | MS.gene78878:intron | 45.0% | |
| TGTTCAGGAACATCGCAACA+GGG | + | chr8.3:56380318-56380337 | None:intergenic | 45.0% | |
| TTACTAGCTCGTCTTCATCC+GGG | - | chr8.3:56379242-56379261 | MS.gene78878:intron | 45.0% | |
| TTTGAATCCCGAGACTGGTA+AGG | - | chr8.3:56380093-56380112 | MS.gene78878:intron | 45.0% | |
| ! | ACACGATTGGTTACCCTGTA+AGG | - | chr8.3:56378147-56378166 | MS.gene78878:intron | 45.0% |
| ! | ACCCTTGCTGTAGTTTGGTT+TGG | - | chr8.3:56376399-56376418 | MS.gene78878:intron | 45.0% |
| ! | ATCAGAACACTTGTTGCGTG+AGG | + | chr8.3:56379396-56379415 | None:intergenic | 45.0% |
| ! | ATGATGGAAGCTGTGTTGTC+TGG | - | chr8.3:56379036-56379055 | MS.gene78878:intron | 45.0% |
| ! | CCCTTAGATTTGGGGTTCTT+GGG | - | chr8.3:56376969-56376988 | MS.gene78878:CDS | 45.0% |
| ! | GTTTCAGTGGTGATGAAGAG+TGG | - | chr8.3:56379804-56379823 | MS.gene78878:intron | 45.0% |
| ! | TCCCTTAGATTTGGGGTTCT+TGG | - | chr8.3:56376968-56376987 | MS.gene78878:CDS | 45.0% |
| ! | TCTGTCTCTGAGAAACCAAG+TGG | - | chr8.3:56379359-56379378 | MS.gene78878:intron | 45.0% |
| !! | AAGTGCATGAGGGCATTACA+AGG | + | chr8.3:56377126-56377145 | None:intergenic | 45.0% |
| !! | CAAGCAGAGAGATGGTTTTG+AGG | + | chr8.3:56379270-56379289 | None:intergenic | 45.0% |
| !! | GTTGGTGGTTCTGCTAGTAA+AGG | - | chr8.3:56379830-56379849 | MS.gene78878:intron | 45.0% |
| !! | TGTGGAGGCATCATAATCTC+TGG | - | chr8.3:56377318-56377337 | MS.gene78878:CDS | 45.0% |
| !!! | GGTGTGTTTTTTCTGTGGTG+CGG | - | chr8.3:56376943-56376962 | MS.gene78878:CDS | 45.0% |
| !!! | GTCTGGGATTTTGAAACCAG+GGG | - | chr8.3:56379053-56379072 | MS.gene78878:intron | 45.0% |
| !!! | TGGGATTGGCTGTTGTTTTG+TGG | - | chr8.3:56377054-56377073 | MS.gene78878:CDS | 45.0% |
| AACACACCCAAATCGGTAGG+CGG | + | chr8.3:56376931-56376950 | None:intergenic | 50.0% | |
| AAGCTCTTTAGCAATGCCCC+TGG | + | chr8.3:56379072-56379091 | None:intergenic | 50.0% | |
| ACCACCAGAGATAGGAACCA+TGG | + | chr8.3:56379537-56379556 | None:intergenic | 50.0% | |
| ACCACTCATGACATCCCACA+GGG | + | chr8.3:56379186-56379205 | None:intergenic | 50.0% | |
| ACGCTGTGCAATGCCACTAT+AGG | + | chr8.3:56377579-56377598 | None:intergenic | 50.0% | |
| ACTCACAGTCTTGCAGCAGT+CGG | + | chr8.3:56377267-56377286 | None:intergenic | 50.0% | |
| ATCTCATACCCCAGGTATCC+AGG | + | chr8.3:56378235-56378254 | None:intergenic | 50.0% | |
| ATTGTGGTCGAATGACGCAG+TGG | - | chr8.3:56376522-56376541 | MS.gene78878:CDS | 50.0% | |
| CAACACCGTTTAGATCACCG+AGG | + | chr8.3:56379697-56379716 | None:intergenic | 50.0% | |
| CAGCGGCCAATTAGCATAGA+AGG | - | chr8.3:56377606-56377625 | MS.gene78878:intron | 50.0% | |
| CATGCCTCAAGTCCAGTTGA+AGG | - | chr8.3:56380435-56380454 | MS.gene78878:intron | 50.0% | |
| CCCTCATGCACTTCTTGTGT+GGG | - | chr8.3:56377133-56377152 | MS.gene78878:CDS | 50.0% | |
| CCTCATGCACTTCTTGTGTG+GGG | - | chr8.3:56377134-56377153 | MS.gene78878:CDS | 50.0% | |
| CGAGCTAGTAAAGGGGTTTG+CGG | + | chr8.3:56379233-56379252 | None:intergenic | 50.0% | |
| CTATGTCTCCTGGATACCTG+GGG | - | chr8.3:56378224-56378243 | MS.gene78878:intron | 50.0% | |
| CTGACAAGTCGTTATCCCTG+TGG | - | chr8.3:56379168-56379187 | MS.gene78878:intron | 50.0% | |
| CTGTTCAGGAACATCGCAAC+AGG | + | chr8.3:56380319-56380338 | None:intergenic | 50.0% | |
| CTGTTGCGATGTTCCTGAAC+AGG | - | chr8.3:56380317-56380336 | MS.gene78878:intron | 50.0% | |
| CTTCAACTGGACTTGAGGCA+TGG | + | chr8.3:56380437-56380456 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr8.3:56379020-56379039 | MS.gene78878:intron | 50.0% | |
| GAGGGAAAGTCTATGTCTCC+TGG | - | chr8.3:56378214-56378233 | MS.gene78878:intron | 50.0% | |
| GCAGCCAAATAGCATAGCAG+AGG | - | chr8.3:56376748-56376767 | MS.gene78878:CDS | 50.0% | |
| GCCCAAGAACCCCAAATCTA+AGG | + | chr8.3:56376973-56376992 | None:intergenic | 50.0% | |
| GGGGCAACCGAAATTCAGAA+AGG | + | chr8.3:56377088-56377107 | None:intergenic | 50.0% | |
| GTCTATGTCTCCTGGATACC+TGG | - | chr8.3:56378222-56378241 | MS.gene78878:intron | 50.0% | |
| GTGCGGTGTCCCTTAGATTT+GGG | - | chr8.3:56376960-56376979 | MS.gene78878:CDS | 50.0% | |
| GTTGAGAAGTTGAAGGCTGC+AGG | - | chr8.3:56379713-56379732 | MS.gene78878:intron | 50.0% | |
| TACCACTCATGACATCCCAC+AGG | + | chr8.3:56379187-56379206 | None:intergenic | 50.0% | |
| TACTAGCTCGTCTTCATCCG+GGG | - | chr8.3:56379243-56379262 | MS.gene78878:intron | 50.0% | |
| TGCAGCAATAGGTGTGAAGG+AGG | + | chr8.3:56379426-56379445 | None:intergenic | 50.0% | |
| TGCGGTGTCCCTTAGATTTG+GGG | - | chr8.3:56376961-56376980 | MS.gene78878:CDS | 50.0% | |
| TTCCATTGACACGGCTGCAA+TGG | - | chr8.3:56377286-56377305 | MS.gene78878:CDS | 50.0% | |
| TTCTGCCAAATAGAGCAGCC+TGG | - | chr8.3:56377428-56377447 | MS.gene78878:CDS | 50.0% | |
| ! | AACACTTGTTGCGTGAGGCA+GGG | + | chr8.3:56379391-56379410 | None:intergenic | 50.0% |
| ! | AATCACGAAGGTGCACTGGA+AGG | - | chr8.3:56379775-56379794 | MS.gene78878:intron | 50.0% |
| ! | ATGCAATCACGAAGGTGCAC+TGG | - | chr8.3:56379771-56379790 | MS.gene78878:intron | 50.0% |
| ! | CCCACACAAGAAGTGCATGA+GGG | + | chr8.3:56377136-56377155 | None:intergenic | 50.0% |
| ! | TGCACAGCGTTTTTGTGCAG+CGG | - | chr8.3:56377589-56377608 | MS.gene78878:intron | 50.0% |
| !! | GATGAAGAGTGGGTTGTTGG+TGG | - | chr8.3:56379815-56379834 | MS.gene78878:intron | 50.0% |
| !! | GCAATTGGCAGAGTGGATTG+TGG | + | chr8.3:56378121-56378140 | None:intergenic | 50.0% |
| !! | GGTGATGAAGAGTGGGTTGT+TGG | - | chr8.3:56379812-56379831 | MS.gene78878:intron | 50.0% |
| !! | TGAGAACCGCCTACCGATTT+GGG | - | chr8.3:56376922-56376941 | MS.gene78878:CDS | 50.0% |
| !!! | AGAGATGGTTTTGAGGACCC+CGG | + | chr8.3:56379263-56379282 | None:intergenic | 50.0% |
| ACATCGCAACAGGGAGATGC+TGG | + | chr8.3:56380309-56380328 | None:intergenic | 55.0% | |
| ATGACGCAGTGGCGTTGCAA+TGG | - | chr8.3:56376533-56376552 | MS.gene78878:CDS | 55.0% | |
| CAAATCGGTAGGCGGTTCTC+AGG | + | chr8.3:56376923-56376942 | None:intergenic | 55.0% | |
| CAATGGCGTTGCGATTGTGG+AGG | - | chr8.3:56377303-56377322 | MS.gene78878:CDS | 55.0% | |
| CAGCGACTCTGATATGTCCG+AGG | - | chr8.3:56380266-56380285 | MS.gene78878:CDS | 55.0% | |
| CATGCACTTCTTGTGTGGGG+TGG | - | chr8.3:56377137-56377156 | MS.gene78878:CDS | 55.0% | |
| CGTGCCATGGTTCCTATCTC+TGG | - | chr8.3:56379530-56379549 | MS.gene78878:intron | 55.0% | |
| CTGCAATGGCGTTGCGATTG+TGG | - | chr8.3:56377300-56377319 | MS.gene78878:CDS | 55.0% | |
| GCCATGGTTCCTATCTCTGG+TGG | - | chr8.3:56379533-56379552 | MS.gene78878:intron | 55.0% | |
| GCCCTCATGCACTTCTTGTG+TGG | - | chr8.3:56377132-56377151 | MS.gene78878:CDS | 55.0% | |
| GGTGCGGTGTCCCTTAGATT+TGG | - | chr8.3:56376959-56376978 | MS.gene78878:CDS | 55.0% | |
| TCCCTGTGGGATGTCATGAG+TGG | - | chr8.3:56379182-56379201 | MS.gene78878:intron | 55.0% | |
| TTGTTGCGTGAGGCAGGGTT+TGG | + | chr8.3:56379386-56379405 | None:intergenic | 55.0% | |
| ! | CCCCACACAAGAAGTGCATG+AGG | + | chr8.3:56377137-56377156 | None:intergenic | 55.0% |
| ! | CTGAGAACCGCCTACCGATT+TGG | - | chr8.3:56376921-56376940 | MS.gene78878:CDS | 55.0% |
| ! | GAACACTTGTTGCGTGAGGC+AGG | + | chr8.3:56379392-56379411 | None:intergenic | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr8.3:56379791-56379810 | MS.gene78878:intron | 55.0% |
| CAGTGGCGTTGCAATGGCAG+AGG | - | chr8.3:56376539-56376558 | MS.gene78878:CDS | 60.0% | |
| CGCCATTGCAGCCGTGTCAA+TGG | + | chr8.3:56377291-56377310 | None:intergenic | 60.0% | |
| GGACACGCCAAGCAGAGAGA+TGG | + | chr8.3:56379278-56379297 | None:intergenic | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr8.3:56379904-56379923 | None:intergenic | 60.0% | |
| ! | GAGGCAGGGTTTGGTCCACT+TGG | + | chr8.3:56379377-56379396 | None:intergenic | 60.0% |
| AGATGGCGAGGTGCGTGCCA+TGG | - | chr8.3:56379517-56379536 | MS.gene78878:intron | 65.0% | |
| CGTCGCGGTACCCTTCTTGC+TGG | - | chr8.3:56376328-56376347 | MS.gene78878:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 56376063 | 56380508 | 56376063 | ID=MS.gene78878 |
| chr8.3 | mRNA | 56376063 | 56380508 | 56376063 | ID=MS.gene78878.t1;Parent=MS.gene78878 |
| chr8.3 | exon | 56380490 | 56380508 | 56380490 | ID=MS.gene78878.t1.exon1;Parent=MS.gene78878.t1 |
| chr8.3 | CDS | 56380490 | 56380508 | 56380490 | ID=cds.MS.gene78878.t1;Parent=MS.gene78878.t1 |
| chr8.3 | exon | 56380222 | 56380320 | 56380222 | ID=MS.gene78878.t1.exon2;Parent=MS.gene78878.t1 |
| chr8.3 | CDS | 56380222 | 56380320 | 56380222 | ID=cds.MS.gene78878.t1;Parent=MS.gene78878.t1 |
| chr8.3 | exon | 56376457 | 56377544 | 56376457 | ID=MS.gene78878.t1.exon3;Parent=MS.gene78878.t1 |
| chr8.3 | CDS | 56376457 | 56377544 | 56376457 | ID=cds.MS.gene78878.t1;Parent=MS.gene78878.t1 |
| chr8.3 | exon | 56376115 | 56376373 | 56376115 | ID=MS.gene78878.t1.exon4;Parent=MS.gene78878.t1 |
| chr8.3 | CDS | 56376115 | 56376373 | 56376115 | ID=cds.MS.gene78878.t1;Parent=MS.gene78878.t1 |
| chr8.3 | exon | 56376063 | 56376079 | 56376063 | ID=MS.gene78878.t1.exon5;Parent=MS.gene78878.t1 |
| chr8.3 | CDS | 56376063 | 56376079 | 56376063 | ID=cds.MS.gene78878.t1;Parent=MS.gene78878.t1 |
| Gene Sequence |
| Protein sequence |
