Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81802.t1 | XP_024640728.1 | 94.4 | 267 | 14 | 1 | 1 | 267 | 483 | 748 | 1.10E-135 | 492.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81802.t1 | B6SFA4 | 33.5 | 266 | 163 | 5 | 1 | 255 | 528 | 790 | 4.1e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81802.t1 | G7KFQ2 | 88.1 | 269 | 32 | 0 | 1 | 269 | 615 | 883 | 9.7e-129 | 469.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene81802 | 0.8181 | 2.34E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene81802 | 0.826465 | 2.67E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene81802 | -0.837037 | 6.58E-57 | -1.69E-46 |
| MS.gene054183 | MS.gene81802 | 0.829431 | 5.17E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene81802 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene81802 | 0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene81802 | 0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene81802 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene81802 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene81802 | 0.814796 | 1.28E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene81802 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene81802 | 0.821737 | 3.44E-53 | -1.69E-46 |
| MS.gene057888 | MS.gene81802 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene059082 | MS.gene81802 | 0.815914 | 7.24E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene81802 | 0.857613 | 1.45E-62 | -1.69E-46 |
| MS.gene059462 | MS.gene81802 | 0.805204 | 1.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81802.t1 | MTR_5g076440 | 87.778 | 270 | 33 | 0 | 1 | 270 | 615 | 884 | 1.33e-161 | 472 |
| MS.gene81802.t1 | MTR_5g076500 | 88.764 | 267 | 13 | 1 | 1 | 267 | 601 | 850 | 2.11e-158 | 462 |
| MS.gene81802.t1 | MTR_5g076310 | 82.463 | 268 | 46 | 1 | 1 | 267 | 581 | 848 | 2.40e-156 | 457 |
| MS.gene81802.t1 | MTR_5g076380 | 77.528 | 267 | 60 | 0 | 1 | 267 | 604 | 870 | 6.93e-146 | 431 |
| MS.gene81802.t1 | MTR_3g064190 | 71.111 | 270 | 78 | 0 | 1 | 270 | 605 | 874 | 2.45e-133 | 399 |
| MS.gene81802.t1 | MTR_5g076320 | 72.137 | 262 | 63 | 1 | 1 | 262 | 629 | 880 | 8.09e-130 | 389 |
| MS.gene81802.t1 | MTR_5g076330 | 70.412 | 267 | 78 | 1 | 1 | 267 | 601 | 866 | 4.01e-129 | 388 |
| MS.gene81802.t1 | MTR_5g076300 | 68.539 | 267 | 83 | 1 | 1 | 267 | 626 | 891 | 6.09e-127 | 382 |
| MS.gene81802.t1 | MTR_3g064210 | 54.545 | 264 | 115 | 2 | 1 | 259 | 683 | 946 | 4.17e-92 | 294 |
| MS.gene81802.t1 | MTR_0189s0030 | 51.822 | 247 | 117 | 2 | 7 | 252 | 601 | 846 | 2.93e-80 | 264 |
| MS.gene81802.t1 | MTR_3g436400 | 48.638 | 257 | 126 | 3 | 7 | 258 | 622 | 877 | 6.96e-79 | 260 |
| MS.gene81802.t1 | MTR_1g052700 | 36.481 | 233 | 144 | 4 | 1 | 232 | 78 | 307 | 7.57e-43 | 149 |
| MS.gene81802.t1 | MTR_5g053930 | 37.662 | 231 | 140 | 4 | 1 | 230 | 524 | 751 | 7.03e-41 | 150 |
| MS.gene81802.t1 | MTR_8g020390 | 36.957 | 230 | 133 | 7 | 7 | 231 | 540 | 762 | 4.06e-40 | 148 |
| MS.gene81802.t1 | MTR_8g020390 | 37.021 | 235 | 136 | 7 | 2 | 231 | 823 | 1050 | 6.62e-40 | 147 |
| MS.gene81802.t1 | MTR_8g020390 | 37.021 | 235 | 136 | 7 | 2 | 231 | 1040 | 1267 | 1.12e-39 | 147 |
| MS.gene81802.t1 | MTR_2g105760 | 37.553 | 237 | 132 | 5 | 1 | 225 | 1835 | 2067 | 7.96e-38 | 142 |
| MS.gene81802.t1 | MTR_5g013820 | 33.884 | 242 | 140 | 5 | 1 | 226 | 668 | 905 | 2.34e-33 | 129 |
| MS.gene81802.t1 | MTR_5g013820 | 33.884 | 242 | 140 | 5 | 1 | 226 | 668 | 905 | 2.35e-33 | 129 |
| MS.gene81802.t1 | MTR_5g080800 | 52.727 | 110 | 47 | 1 | 141 | 250 | 6 | 110 | 1.17e-32 | 127 |
| MS.gene81802.t1 | MTR_7g092200 | 33.198 | 247 | 122 | 8 | 7 | 232 | 417 | 641 | 7.81e-23 | 98.2 |
| MS.gene81802.t1 | MTR_5g006890 | 32.340 | 235 | 128 | 9 | 2 | 218 | 586 | 807 | 1.40e-19 | 88.6 |
| MS.gene81802.t1 | MTR_2g049990 | 32.340 | 235 | 128 | 9 | 2 | 218 | 586 | 807 | 1.58e-19 | 88.6 |
| MS.gene81802.t1 | MTR_5g006890 | 32.340 | 235 | 128 | 9 | 2 | 218 | 327 | 548 | 2.08e-19 | 88.2 |
| MS.gene81802.t1 | MTR_2g049990 | 32.340 | 235 | 128 | 9 | 2 | 218 | 327 | 548 | 2.68e-19 | 87.8 |
| MS.gene81802.t1 | MTR_1g040155 | 30.837 | 227 | 129 | 9 | 7 | 215 | 663 | 879 | 7.54e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81802.t1 | AT5G37165 | 55.513 | 263 | 110 | 2 | 2 | 262 | 159 | 416 | 8.29e-102 | 303 |
| MS.gene81802.t1 | AT5G52090 | 59.677 | 248 | 97 | 2 | 1 | 246 | 409 | 655 | 2.93e-101 | 310 |
| MS.gene81802.t1 | AT5G37030 | 60.976 | 246 | 90 | 3 | 3 | 243 | 392 | 636 | 4.84e-101 | 308 |
| MS.gene81802.t1 | AT1G65810 | 59.751 | 241 | 96 | 1 | 1 | 241 | 598 | 837 | 8.04e-99 | 311 |
| MS.gene81802.t1 | AT5G37140 | 57.724 | 246 | 104 | 0 | 1 | 246 | 426 | 671 | 1.07e-98 | 303 |
| MS.gene81802.t1 | AT1G65810 | 59.751 | 241 | 96 | 1 | 1 | 241 | 598 | 837 | 1.60e-98 | 310 |
| MS.gene81802.t1 | AT1G65810 | 59.751 | 241 | 96 | 1 | 1 | 241 | 598 | 837 | 1.94e-98 | 310 |
| MS.gene81802.t1 | AT5G37150 | 58.468 | 248 | 100 | 2 | 1 | 246 | 572 | 818 | 4.68e-98 | 305 |
| MS.gene81802.t1 | AT4G05540 | 65.116 | 215 | 72 | 2 | 1 | 213 | 476 | 689 | 4.21e-92 | 286 |
| MS.gene81802.t1 | AT1G65780 | 56.031 | 257 | 110 | 2 | 1 | 254 | 609 | 865 | 8.36e-81 | 263 |
| MS.gene81802.t1 | AT4G15570 | 36.564 | 227 | 139 | 4 | 1 | 225 | 439 | 662 | 1.21e-41 | 152 |
| MS.gene81802.t1 | AT4G15570 | 36.564 | 227 | 139 | 4 | 1 | 225 | 439 | 662 | 1.21e-41 | 152 |
| MS.gene81802.t1 | AT4G15570 | 36.564 | 227 | 139 | 4 | 1 | 225 | 528 | 751 | 1.42e-41 | 152 |
| MS.gene81802.t1 | AT4G15570 | 36.564 | 227 | 139 | 4 | 1 | 225 | 528 | 751 | 1.42e-41 | 152 |
| MS.gene81802.t1 | AT2G19120 | 37.657 | 239 | 129 | 8 | 2 | 231 | 820 | 1047 | 2.67e-39 | 146 |
| MS.gene81802.t1 | AT4G30100 | 36.522 | 230 | 126 | 8 | 7 | 227 | 988 | 1206 | 7.80e-36 | 136 |
| MS.gene81802.t1 | AT4G30100 | 36.522 | 230 | 126 | 8 | 7 | 227 | 988 | 1206 | 7.80e-36 | 136 |
| MS.gene81802.t1 | AT1G16800 | 36.161 | 224 | 131 | 5 | 10 | 225 | 1702 | 1921 | 8.88e-35 | 133 |
| MS.gene81802.t1 | AT1G16800 | 36.161 | 224 | 131 | 5 | 10 | 225 | 1772 | 1991 | 9.53e-35 | 133 |
| MS.gene81802.t1 | AT1G16800 | 36.161 | 224 | 131 | 5 | 10 | 225 | 1660 | 1879 | 9.94e-35 | 133 |
| MS.gene81802.t1 | AT5G47010 | 33.471 | 242 | 141 | 5 | 1 | 226 | 680 | 917 | 7.15e-33 | 127 |
| MS.gene81802.t1 | AT2G03270 | 33.906 | 233 | 111 | 8 | 7 | 218 | 412 | 622 | 9.56e-22 | 95.1 |
| MS.gene81802.t1 | AT1G05460 | 34.874 | 238 | 119 | 8 | 2 | 218 | 587 | 809 | 2.94e-20 | 90.9 |
| MS.gene81802.t1 | AT1G05460 | 34.874 | 238 | 119 | 8 | 2 | 218 | 587 | 809 | 1.09e-19 | 89.4 |
| MS.gene81802.t1 | AT5G35970 | 31.140 | 228 | 131 | 8 | 7 | 217 | 711 | 929 | 4.09e-16 | 78.6 |
Find 39 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAATGTTCGTTCTGTTGA+TGG | 0.262048 | 5.2:+11188652 | MS.gene81802:CDS |
| AGATATTGTCTTTGGATATT+AGG | 0.300734 | 5.2:+11188872 | MS.gene81802:intron |
| TCATAAACTTGAGCATTATA+TGG | 0.306286 | 5.2:-11188577 | None:intergenic |
| CAAGGAAACAAGCTTATTGA+TGG | 0.334295 | 5.2:-11188193 | None:intergenic |
| ATTGCGGACAATTGTCGATT+TGG | 0.348564 | 5.2:+11188097 | MS.gene81802:CDS |
| TAGCCAGTAGTGATTCTATC+TGG | 0.363659 | 5.2:+11188909 | MS.gene81802:CDS |
| TGTCTTGCTTAACTTTCTCC+TGG | 0.405353 | 5.2:-11188603 | None:intergenic |
| TATAATAAGAGCTTTCTTGA+AGG | 0.419051 | 5.2:+11188271 | MS.gene81802:CDS |
| ATATCTACTGTGAGATCAAA+TGG | 0.422646 | 5.2:+11188706 | MS.gene81802:CDS |
| TGCTGACGAGGACATGAAAC+TGG | 0.441494 | 5.2:+11188976 | MS.gene81802:CDS |
| CGTTCTGTTGATGGTTTCCA+AGG | 0.443849 | 5.2:+11188661 | MS.gene81802:CDS |
| TCAAATGGAAGTGGTAATAT+CGG | 0.454389 | 5.2:+11188721 | MS.gene81802:CDS |
| AAGAAGTATGTTTGAGAGAC+TGG | 0.461971 | 5.2:+11188120 | MS.gene81802:CDS |
| TAATATCTTCCTCACCGCCT+TGG | 0.472392 | 5.2:-11188678 | None:intergenic |
| TGCTCAAGTTTATGAAATCC+AGG | 0.488265 | 5.2:+11188585 | MS.gene81802:CDS |
| ACCAAATGTCTCCTCACCCT+TGG | 0.492957 | 5.2:-11188329 | None:intergenic |
| TCCAAGGGTGAGGAGACATT+TGG | 0.494736 | 5.2:+11188328 | MS.gene81802:CDS |
| AGCTTTCATCCTTGACAGCT+AGG | 0.496236 | 5.2:-11188249 | None:intergenic |
| AGCTTATTGATGGATGCATT+CGG | 0.510495 | 5.2:-11188183 | None:intergenic |
| GCTTTCATCCTTGACAGCTA+GGG | 0.513960 | 5.2:-11188248 | None:intergenic |
| TTTAATCATCTCAGAAATGA+CGG | 0.516197 | 5.2:-11188386 | None:intergenic |
| TATTAATATATCCAAGGGTG+AGG | 0.528313 | 5.2:+11188318 | MS.gene81802:CDS |
| ACAAAGAAGAAAGTTAGCAT+TGG | 0.535667 | 5.2:+11188544 | MS.gene81802:CDS |
| TTCGGATGCCCTAGCTGTCA+AGG | 0.542296 | 5.2:+11188240 | MS.gene81802:CDS |
| GAAAGTTAAGCAAGACACTT+GGG | 0.544723 | 5.2:+11188609 | MS.gene81802:CDS |
| CGGACATAGCTTGAAGAACA+TGG | 0.553176 | 5.2:+11188354 | MS.gene81802:CDS |
| GAGCTAATGTTGCAATGACA+AGG | 0.555800 | 5.2:+11188764 | MS.gene81802:CDS |
| AGAAAGTTAAGCAAGACACT+TGG | 0.566618 | 5.2:+11188608 | MS.gene81802:CDS |
| ATGTTGCAATGACAAGGGCT+AGG | 0.572309 | 5.2:+11188770 | MS.gene81802:CDS |
| ACTGTGAGATCAAATGGAAG+TGG | 0.575364 | 5.2:+11188712 | MS.gene81802:CDS |
| TCATCATAGAACTCTTTGCA+AGG | 0.575937 | 5.2:-11188211 | None:intergenic |
| TCTCCAGATAGAATCACTAC+TGG | 0.590428 | 5.2:-11188912 | None:intergenic |
| TCTGTTGATGGTTTCCAAGG+CGG | 0.607165 | 5.2:+11188664 | MS.gene81802:CDS |
| CTGTTATCATAATGCTGACG+AGG | 0.607604 | 5.2:+11188964 | MS.gene81802:CDS |
| TTTGAGAGACTGGTGATGCT+AGG | 0.620623 | 5.2:+11188130 | MS.gene81802:CDS |
| ATTGATGCTATACTTCCTCA+AGG | 0.637505 | 5.2:+11189091 | MS.gene81802:CDS |
| GGTGAGGAGACATTTGGTCG+CGG | 0.639719 | 5.2:+11188334 | MS.gene81802:CDS |
| AGCTAATGTTGCAATGACAA+GGG | 0.653965 | 5.2:+11188765 | MS.gene81802:CDS |
| TGATGGTTTCCAAGGCGGTG+AGG | 0.670301 | 5.2:+11188669 | MS.gene81802:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGATAATTAACACAAA+TGG | - | chr5.2:11188440-11188459 | None:intergenic | 15.0% |
| !!! | TCTTTTATTAATATATCCAA+GGG | + | chr5.2:11188313-11188332 | MS.gene81802:CDS | 15.0% |
| !!! | TTCTTTTATTAATATATCCA+AGG | + | chr5.2:11188312-11188331 | MS.gene81802:CDS | 15.0% |
| !! | ATGATTAAAAACCTAAGAAA+AGG | + | chr5.2:11188400-11188419 | MS.gene81802:CDS | 20.0% |
| !! | GTTCTATGATGAAAAAATTT+CGG | + | chr5.2:11188222-11188241 | MS.gene81802:CDS | 20.0% |
| ! | AGATATTGTCTTTGGATATT+AGG | + | chr5.2:11188872-11188891 | MS.gene81802:intron | 25.0% |
| ! | TATAATAAGAGCTTTCTTGA+AGG | + | chr5.2:11188271-11188290 | MS.gene81802:CDS | 25.0% |
| ! | TCATAAACTTGAGCATTATA+TGG | - | chr5.2:11188580-11188599 | None:intergenic | 25.0% |
| ! | TTTAATCATCTCAGAAATGA+CGG | - | chr5.2:11188389-11188408 | None:intergenic | 25.0% |
| !! | AGAAAAAACAACCTTTTCTT+AGG | - | chr5.2:11188414-11188433 | None:intergenic | 25.0% |
| !!! | ACTTTACTTTGTTATGCTTT+TGG | + | chr5.2:11188507-11188526 | MS.gene81802:intron | 25.0% |
| ACAAAGAAGAAAGTTAGCAT+TGG | + | chr5.2:11188544-11188563 | MS.gene81802:CDS | 30.0% | |
| ATATCTACTGTGAGATCAAA+TGG | + | chr5.2:11188706-11188725 | MS.gene81802:CDS | 30.0% | |
| TATTAATATATCCAAGGGTG+AGG | + | chr5.2:11188318-11188337 | MS.gene81802:CDS | 30.0% | |
| TCAAATGGAAGTGGTAATAT+CGG | + | chr5.2:11188721-11188740 | MS.gene81802:CDS | 30.0% | |
| TGTATTTGCAGATTCAAAGT+TGG | + | chr5.2:11188823-11188842 | MS.gene81802:intron | 30.0% | |
| ! | TTTTGTGCAGATATTGTCTT+TGG | + | chr5.2:11188864-11188883 | MS.gene81802:intron | 30.0% |
| AGAAAGTTAAGCAAGACACT+TGG | + | chr5.2:11188608-11188627 | MS.gene81802:CDS | 35.0% | |
| AGCTAATGTTGCAATGACAA+GGG | + | chr5.2:11188765-11188784 | MS.gene81802:CDS | 35.0% | |
| CAAGGAAACAAGCTTATTGA+TGG | - | chr5.2:11188196-11188215 | None:intergenic | 35.0% | |
| GAAAGTTAAGCAAGACACTT+GGG | + | chr5.2:11188609-11188628 | MS.gene81802:CDS | 35.0% | |
| GTTAATGTTCGTTCTGTTGA+TGG | + | chr5.2:11188652-11188671 | MS.gene81802:CDS | 35.0% | |
| TCATCATAGAACTCTTTGCA+AGG | - | chr5.2:11188214-11188233 | None:intergenic | 35.0% | |
| TGCTCAAGTTTATGAAATCC+AGG | + | chr5.2:11188585-11188604 | MS.gene81802:CDS | 35.0% | |
| ! | AAGAAGTATGTTTGAGAGAC+TGG | + | chr5.2:11188120-11188139 | MS.gene81802:CDS | 35.0% |
| ! | AGCTTATTGATGGATGCATT+CGG | - | chr5.2:11188186-11188205 | None:intergenic | 35.0% |
| ! | TGCTTTTGGTAGAGTTTATG+AGG | + | chr5.2:11188521-11188540 | MS.gene81802:intron | 35.0% |
| ACTGTGAGATCAAATGGAAG+TGG | + | chr5.2:11188712-11188731 | MS.gene81802:CDS | 40.0% | |
| CTGTTATCATAATGCTGACG+AGG | + | chr5.2:11188964-11188983 | MS.gene81802:CDS | 40.0% | |
| GAGCTAATGTTGCAATGACA+AGG | + | chr5.2:11188764-11188783 | MS.gene81802:CDS | 40.0% | |
| TAGCCAGTAGTGATTCTATC+TGG | + | chr5.2:11188909-11188928 | MS.gene81802:CDS | 40.0% | |
| TCTCCAGATAGAATCACTAC+TGG | - | chr5.2:11188915-11188934 | None:intergenic | 40.0% | |
| TGAATCTGCAAATACACACG+AGG | - | chr5.2:11188819-11188838 | None:intergenic | 40.0% | |
| TGTCTTGCTTAACTTTCTCC+TGG | - | chr5.2:11188606-11188625 | None:intergenic | 40.0% | |
| ! | ATTGCGGACAATTGTCGATT+TGG | + | chr5.2:11188097-11188116 | MS.gene81802:CDS | 40.0% |
| AGCTTTCATCCTTGACAGCT+AGG | - | chr5.2:11188252-11188271 | None:intergenic | 45.0% | |
| ATGTTGCAATGACAAGGGCT+AGG | + | chr5.2:11188770-11188789 | MS.gene81802:CDS | 45.0% | |
| CGGACATAGCTTGAAGAACA+TGG | + | chr5.2:11188354-11188373 | MS.gene81802:CDS | 45.0% | |
| GCTTTCATCCTTGACAGCTA+GGG | - | chr5.2:11188251-11188270 | None:intergenic | 45.0% | |
| TAATATCTTCCTCACCGCCT+TGG | - | chr5.2:11188681-11188700 | None:intergenic | 45.0% | |
| ! | TTTGAGAGACTGGTGATGCT+AGG | + | chr5.2:11188130-11188149 | MS.gene81802:CDS | 45.0% |
| !! | CGTTCTGTTGATGGTTTCCA+AGG | + | chr5.2:11188661-11188680 | MS.gene81802:CDS | 45.0% |
| !! | TCTGTTGATGGTTTCCAAGG+CGG | + | chr5.2:11188664-11188683 | MS.gene81802:CDS | 45.0% |
| ACCAAATGTCTCCTCACCCT+TGG | - | chr5.2:11188332-11188351 | None:intergenic | 50.0% | |
| TCCAAGGGTGAGGAGACATT+TGG | + | chr5.2:11188328-11188347 | MS.gene81802:CDS | 50.0% | |
| TGCTGACGAGGACATGAAAC+TGG | + | chr5.2:11188976-11188995 | MS.gene81802:CDS | 50.0% | |
| GGTGAGGAGACATTTGGTCG+CGG | + | chr5.2:11188334-11188353 | MS.gene81802:CDS | 55.0% | |
| TGATGGTTTCCAAGGCGGTG+AGG | + | chr5.2:11188669-11188688 | MS.gene81802:CDS | 55.0% | |
| TTCGGATGCCCTAGCTGTCA+AGG | + | chr5.2:11188240-11188259 | MS.gene81802:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 11188097 | 11189112 | 11188097 | ID=MS.gene81802 |
| chr5.2 | mRNA | 11188097 | 11189112 | 11188097 | ID=MS.gene81802.t1;Parent=MS.gene81802 |
| chr5.2 | exon | 11188097 | 11188421 | 11188097 | ID=MS.gene81802.t1.exon1;Parent=MS.gene81802.t1 |
| chr5.2 | CDS | 11188097 | 11188421 | 11188097 | ID=cds.MS.gene81802.t1;Parent=MS.gene81802.t1 |
| chr5.2 | exon | 11188533 | 11188791 | 11188533 | ID=MS.gene81802.t1.exon2;Parent=MS.gene81802.t1 |
| chr5.2 | CDS | 11188533 | 11188791 | 11188533 | ID=cds.MS.gene81802.t1;Parent=MS.gene81802.t1 |
| chr5.2 | exon | 11188874 | 11189112 | 11188874 | ID=MS.gene81802.t1.exon3;Parent=MS.gene81802.t1 |
| chr5.2 | CDS | 11188874 | 11189112 | 11188874 | ID=cds.MS.gene81802.t1;Parent=MS.gene81802.t1 |
| Gene Sequence |
| Protein sequence |
