Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82941.t1 | XP_003629017.2 | 98 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.00E+00 | 1830.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82941.t1 | Q8L7A9 | 70.5 | 981 | 244 | 11 | 1 | 979 | 1 | 938 | 0.0e+00 | 1276.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82941.t1 | G7L7U1 | 98.0 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.0e+00 | 1830.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049209 | MS.gene82941 | 0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene050257 | MS.gene82941 | 0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene050817 | MS.gene82941 | 0.822823 | 1.93E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene82941 | 0.809372 | 1.95E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene82941 | 0.81507 | 1.12E-51 | -1.69E-46 |
| MS.gene054585 | MS.gene82941 | 0.858341 | 8.80E-63 | -1.69E-46 |
| MS.gene054824 | MS.gene82941 | 0.802103 | 6.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014683 | MS.gene82941 | PPI |
| MS.gene031180 | MS.gene82941 | PPI |
| MS.gene40593 | MS.gene82941 | PPI |
| MS.gene82941 | MS.gene32794 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82941.t1 | MTR_8g072250 | 97.957 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.0 | 1962 |
| MS.gene82941.t1 | MTR_5g034780 | 25.340 | 588 | 413 | 9 | 19 | 594 | 4 | 577 | 1.68e-58 | 217 |
| MS.gene82941.t1 | MTR_8g063690 | 24.497 | 596 | 408 | 9 | 19 | 594 | 4 | 577 | 1.61e-52 | 199 |
| MS.gene82941.t1 | MTR_2g084610 | 24.020 | 587 | 405 | 15 | 28 | 592 | 12 | 579 | 1.06e-51 | 197 |
| MS.gene82941.t1 | MTR_8g104380 | 25.849 | 383 | 259 | 7 | 27 | 407 | 20 | 379 | 2.13e-21 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82941.t1 | AT1G31730 | 69.827 | 981 | 251 | 12 | 1 | 979 | 1 | 938 | 0.0 | 1344 |
| MS.gene82941.t1 | AT1G60070 | 26.936 | 594 | 394 | 9 | 19 | 593 | 4 | 576 | 2.71e-63 | 231 |
| MS.gene82941.t1 | AT1G60070 | 26.936 | 594 | 394 | 9 | 19 | 593 | 4 | 576 | 1.03e-62 | 230 |
| MS.gene82941.t1 | AT1G23900 | 24.704 | 591 | 411 | 8 | 19 | 593 | 4 | 576 | 3.21e-55 | 207 |
| MS.gene82941.t1 | AT1G23900 | 24.704 | 591 | 411 | 8 | 19 | 593 | 4 | 576 | 3.21e-55 | 207 |
| MS.gene82941.t1 | AT1G23900 | 24.742 | 582 | 404 | 8 | 28 | 593 | 1 | 564 | 6.19e-54 | 203 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 9.12e-51 | 194 |
| MS.gene82941.t1 | AT5G22780 | 25.138 | 545 | 368 | 14 | 65 | 588 | 48 | 573 | 1.44e-50 | 194 |
| MS.gene82941.t1 | AT5G22780 | 25.138 | 545 | 368 | 14 | 65 | 588 | 48 | 573 | 1.44e-50 | 194 |
| MS.gene82941.t1 | AT1G48760 | 25.051 | 487 | 311 | 13 | 41 | 510 | 31 | 480 | 2.05e-24 | 110 |
| MS.gene82941.t1 | AT1G48760 | 25.051 | 487 | 311 | 13 | 41 | 510 | 31 | 480 | 2.05e-24 | 110 |
| MS.gene82941.t1 | AT1G48760 | 25.051 | 487 | 311 | 13 | 41 | 510 | 31 | 480 | 2.05e-24 | 110 |
| MS.gene82941.t1 | AT1G23935 | 24.752 | 303 | 212 | 5 | 7 | 305 | 903 | 1193 | 3.25e-13 | 74.7 |
| MS.gene82941.t1 | AT1G23935 | 24.752 | 303 | 212 | 5 | 7 | 305 | 853 | 1143 | 3.62e-13 | 74.7 |
| MS.gene82941.t1 | AT1G23935 | 24.752 | 303 | 212 | 5 | 7 | 305 | 852 | 1142 | 3.68e-13 | 74.7 |
Find 231 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCCATTCACTGGATTT+TGG | 0.134245 | 8.1:+33236569 | None:intergenic |
| TACAAATGCACCTGATATTA+TGG | 0.160773 | 8.1:-33236155 | MS.gene82941:CDS |
| TATGAATTACAAGCTGTTAT+TGG | 0.204151 | 8.1:-33238247 | MS.gene82941:CDS |
| AGGTTATTTGTTGGGTTCTT+GGG | 0.216014 | 8.1:-33242535 | MS.gene82941:CDS |
| CCGTTATTGGCGATATAATT+AGG | 0.223296 | 8.1:-33244993 | MS.gene82941:CDS |
| CAGGTTATTTGTTGGGTTCT+TGG | 0.225264 | 8.1:-33242536 | MS.gene82941:CDS |
| GAACACATGTACACCGTTAT+TGG | 0.232178 | 8.1:-33245006 | MS.gene82941:CDS |
| GTCCAGATTCTTGCTGATCT+TGG | 0.234688 | 8.1:+33236854 | None:intergenic |
| TGTTGGGTTCTTGGGGAATA+TGG | 0.245639 | 8.1:-33242527 | MS.gene82941:CDS |
| ACTCTTTCATCTTCCGTTTA+GGG | 0.247975 | 8.1:+33246867 | None:intergenic |
| CAAACTGCAGTGTCAATCTT+TGG | 0.260684 | 8.1:-33238317 | MS.gene82941:intron |
| GCTCTCCTCGGATGCTTTAA+TGG | 0.268566 | 8.1:+33236327 | None:intergenic |
| CAACTTGGGATTGGGATATA+TGG | 0.275024 | 8.1:+33244906 | None:intergenic |
| TGCTAATGCTAAAGATTCTT+TGG | 0.275970 | 8.1:-33235978 | MS.gene82941:CDS |
| TACTCTTTCATCTTCCGTTT+AGG | 0.276919 | 8.1:+33246866 | None:intergenic |
| ATCTTCCGTTTAGGGATATC+TGG | 0.279722 | 8.1:+33246875 | None:intergenic |
| CTCGGTCACGACGCTTCTTT+CGG | 0.282371 | 8.1:-33246815 | MS.gene82941:CDS |
| CGATGAACCAAATCCGTATA+AGG | 0.304618 | 8.1:-33246381 | MS.gene82941:CDS |
| TGCCGTCATTGACTGCTTAG+AGG | 0.309383 | 8.1:-33244638 | MS.gene82941:intron |
| GATTCGGTCTTCTTCGGCTT+TGG | 0.319752 | 8.1:+33246940 | None:intergenic |
| AAGCTTGCCGCTTCATTGTT+TGG | 0.324600 | 8.1:-33236454 | MS.gene82941:CDS |
| GAGTCATATTTGCGCATTAT+TGG | 0.327916 | 8.1:-33242684 | MS.gene82941:CDS |
| ACAAGATCCTTATACGGATT+TGG | 0.328424 | 8.1:+33246374 | None:intergenic |
| GGATATCTGGTTCGGAGATT+CGG | 0.335176 | 8.1:+33246888 | None:intergenic |
| CACTGGGAAGTTATGCGATA+TGG | 0.347901 | 8.1:-33242471 | MS.gene82941:CDS |
| CTAGTTGATGTTCTTCTCTC+AGG | 0.348573 | 8.1:+33236418 | None:intergenic |
| CGGTTGATTGCAGAAGGATT+TGG | 0.350957 | 8.1:-33242850 | MS.gene82941:CDS |
| CTGATTACAGGTTATTTGTT+GGG | 0.351601 | 8.1:-33242543 | MS.gene82941:intron |
| CGCAGCAGCTTCTAACAACT+TGG | 0.351640 | 8.1:+33244891 | None:intergenic |
| GCAGCACCAACATTAGCTTT+TGG | 0.353994 | 8.1:+33236385 | None:intergenic |
| TCCACAAGATTTGCTTGACT+TGG | 0.356959 | 8.1:-33236287 | MS.gene82941:CDS |
| AGCCAAGATCAGCAAGAATC+TGG | 0.360813 | 8.1:-33236856 | MS.gene82941:CDS |
| GCTTCCATCAGTGTTTCTTC+AGG | 0.362276 | 8.1:-33242652 | MS.gene82941:intron |
| TGATAATGATCCTGGTGTTA+TGG | 0.371274 | 8.1:-33246438 | MS.gene82941:CDS |
| TTTGATGGCACAGGAGCCTT+TGG | 0.375463 | 8.1:+33236799 | None:intergenic |
| TGGAGATCTTGTGAATATTA+AGG | 0.376401 | 8.1:-33242890 | MS.gene82941:CDS |
| TACCTCAATGTCTTCGCAAC+TGG | 0.388904 | 8.1:+33238183 | None:intergenic |
| GCTGATTACAGGTTATTTGT+TGG | 0.389807 | 8.1:-33242544 | MS.gene82941:intron |
| CTCTCCTCGGATGCTTTAAT+GGG | 0.390827 | 8.1:+33236328 | None:intergenic |
| GATTACGATTCGGTCTTCTT+CGG | 0.392121 | 8.1:+33246934 | None:intergenic |
| ATTCACCGATTGATTTGATT+AGG | 0.392413 | 8.1:+33246969 | None:intergenic |
| TGGTGATAATCATAGCTCTT+AGG | 0.393881 | 8.1:+33246305 | None:intergenic |
| CTGAAAATTCTTGCATTGTT+GGG | 0.395186 | 8.1:-33245051 | MS.gene82941:CDS |
| CACTTCCACATTGGAAGACT+TGG | 0.396065 | 8.1:+33243156 | None:intergenic |
| GCATAACTTCCCAGTGATAT+AGG | 0.398047 | 8.1:+33242478 | None:intergenic |
| TCATCAGATACAGGATCATC+AGG | 0.400967 | 8.1:-33236679 | MS.gene82941:CDS |
| ACCTTTGTCATGCCATTCAC+TGG | 0.403390 | 8.1:+33236562 | None:intergenic |
| ATTACAAGCTGTTATTGGTT+TGG | 0.405372 | 8.1:-33238242 | MS.gene82941:CDS |
| TTCTAATGATGAAATTGTTA+AGG | 0.405378 | 8.1:-33242438 | MS.gene82941:intron |
| AGAAACACTGATGGAAGCTT+TGG | 0.407807 | 8.1:+33242657 | None:intergenic |
| GATATTATGGGACTCTATAG+TGG | 0.407931 | 8.1:-33236142 | MS.gene82941:CDS |
| CATGAATGGGTCCACGGTGG+GGG | 0.409859 | 8.1:+33236240 | None:intergenic |
| GAACGAAAGGAGCCGGCATC+TGG | 0.411704 | 8.1:+33246285 | None:intergenic |
| CAGAGTAACGGCGAGATAAC+CGG | 0.412139 | 8.1:+33246739 | None:intergenic |
| GCTTCTAACAACTTGGGATT+GGG | 0.412784 | 8.1:+33244898 | None:intergenic |
| CTAACAACAAGATCCTTATA+CGG | 0.413946 | 8.1:+33246368 | None:intergenic |
| GGGCTTAAGCTAAGGCTTGA+TGG | 0.413978 | 8.1:-33236658 | MS.gene82941:CDS |
| CTGTTATTGGTTTGGATGCA+CGG | 0.417412 | 8.1:-33238234 | MS.gene82941:CDS |
| GATAATGATCCTGGTGTTAT+GGG | 0.418077 | 8.1:-33246437 | MS.gene82941:CDS |
| GCTGAAAATTCTTGCATTGT+TGG | 0.418206 | 8.1:-33245052 | MS.gene82941:CDS |
| GTCGTGGATGATAGTGAAAC+TGG | 0.422782 | 8.1:+33236769 | None:intergenic |
| CCGTTTAGGGATATCTGGTT+CGG | 0.424087 | 8.1:+33246880 | None:intergenic |
| AGCTTCTAACAACTTGGGAT+TGG | 0.425340 | 8.1:+33244897 | None:intergenic |
| GAGTAATCATTGGTTTATAC+AGG | 0.425577 | 8.1:-33243032 | MS.gene82941:intron |
| CTATAGAGTCCCATAATATC+AGG | 0.426017 | 8.1:+33236145 | None:intergenic |
| CAGATGGGTGTGACCCCAAC+TGG | 0.430929 | 8.1:-33235935 | MS.gene82941:CDS |
| TGGCACTTCATAGCTTTCAT+AGG | 0.434008 | 8.1:-33246514 | MS.gene82941:CDS |
| ATGGGATCACAAGGCGCGTT+CGG | 0.435386 | 8.1:-33247013 | MS.gene82941:CDS |
| GCAGCTGTCAGAGGCACAAC+GGG | 0.436109 | 8.1:-33236040 | MS.gene82941:CDS |
| AGTTGGGATTCTGTCCAGTT+GGG | 0.436391 | 8.1:+33235921 | None:intergenic |
| GATGCCGGCTCCTTTCGTTC+AGG | 0.441178 | 8.1:-33246282 | MS.gene82941:intron |
| TCATAGCTTTCATAGGAAAT+CGG | 0.442142 | 8.1:-33246507 | MS.gene82941:CDS |
| CACACATCGAGAAGCTATAT+AGG | 0.442550 | 8.1:+33243078 | None:intergenic |
| AATTTGCACCGAGTAATCAT+TGG | 0.445556 | 8.1:-33243042 | MS.gene82941:CDS |
| GACCCATTCATGCAACTAGA+AGG | 0.451396 | 8.1:-33236229 | MS.gene82941:CDS |
| TTCGTTGATTAATCTACAAA+CGG | 0.451855 | 8.1:+33246616 | None:intergenic |
| ACAAATGCACCTGATATTAT+GGG | 0.455505 | 8.1:-33236154 | MS.gene82941:CDS |
| TTTCGCTTCAAAGTATCGTC+AGG | 0.463858 | 8.1:+33243205 | None:intergenic |
| GCGCTCGTTCTCTGATATGT+AGG | 0.465295 | 8.1:+33236909 | None:intergenic |
| GGGGAATATGGCACAGCTGA+TGG | 0.467637 | 8.1:-33242515 | MS.gene82941:CDS |
| AATCGTTAATACGATTCAAA+AGG | 0.468077 | 8.1:-33246684 | MS.gene82941:CDS |
| CCACAAGATTTGCTTGACTT+GGG | 0.468481 | 8.1:-33236286 | MS.gene82941:CDS |
| CCCCACTTTCTATAGCCTGC+TGG | 0.471779 | 8.1:+33236938 | None:intergenic |
| CGATTTCACGGATTACGATT+CGG | 0.471806 | 8.1:+33246924 | None:intergenic |
| TATGCGTTTGAAATAGCAGC+TGG | 0.472441 | 8.1:-33239811 | MS.gene82941:CDS |
| ACAGCATGGTCTGAGATTTG+AGG | 0.473050 | 8.1:-33236833 | MS.gene82941:CDS |
| AGTCCTTCTAGTTGCATGAA+TGG | 0.473320 | 8.1:+33236226 | None:intergenic |
| TGCATGAATGGGTCCACGGT+GGG | 0.476459 | 8.1:+33236238 | None:intergenic |
| ATATCAGAGAACGAGCGCTC+TGG | 0.477437 | 8.1:-33236904 | MS.gene82941:CDS |
| AGCAAGTCTCTGAACAAGTT+GGG | 0.478029 | 8.1:+33235905 | None:intergenic |
| GTCCTTCTAGTTGCATGAAT+GGG | 0.486983 | 8.1:+33236227 | None:intergenic |
| CCTAATTATATCGCCAATAA+CGG | 0.489566 | 8.1:+33244993 | None:intergenic |
| GCATGAATGGGTCCACGGTG+GGG | 0.492744 | 8.1:+33236239 | None:intergenic |
| GGTGATTCATCAAGTAACAT+AGG | 0.492869 | 8.1:-33244967 | MS.gene82941:CDS |
| CATTCCGCTTCCTATATCAC+TGG | 0.494068 | 8.1:-33242488 | MS.gene82941:CDS |
| GGTTATTTGTTGGGTTCTTG+GGG | 0.494517 | 8.1:-33242534 | MS.gene82941:CDS |
| ATTCTTGCATTGTTGGGAAG+TGG | 0.495732 | 8.1:-33245045 | MS.gene82941:CDS |
| TGCTAAAGATTCTTTGGAGA+AGG | 0.496576 | 8.1:-33235972 | MS.gene82941:CDS |
| ATATTATGGGACTCTATAGT+GGG | 0.499149 | 8.1:-33236141 | MS.gene82941:CDS |
| CTCGACCTAATCAAATCAAT+CGG | 0.500422 | 8.1:-33246974 | MS.gene82941:CDS |
| CTTGCCGCTTCATTGTTTGG+CGG | 0.500585 | 8.1:-33236451 | MS.gene82941:CDS |
| GTTGTTGAGCTTCTTTCGCA+TGG | 0.504811 | 8.1:-33246566 | MS.gene82941:CDS |
| ATAATCCCACTGACGTGATC+TGG | 0.505989 | 8.1:+33236701 | None:intergenic |
| CCTCAATGATTATATCCAGC+AGG | 0.506143 | 8.1:-33236953 | MS.gene82941:CDS |
| CCCTTCACAGATTGTGATAC+GGG | 0.506698 | 8.1:+33236001 | None:intergenic |
| CTTACTGTAGAACTAATGCT+TGG | 0.508595 | 8.1:+33236196 | None:intergenic |
| TCATAGGAAATCGGCGTCGT+CGG | 0.508697 | 8.1:-33246498 | MS.gene82941:CDS |
| GTGGGATTATCATCAGATAC+AGG | 0.511328 | 8.1:-33236688 | MS.gene82941:CDS |
| CGCATGGGAAAGAAGCGGTT+AGG | 0.511994 | 8.1:-33246550 | MS.gene82941:CDS |
| TAGTCATAATCTGAAATACA+TGG | 0.515074 | 8.1:-33244722 | MS.gene82941:CDS |
| CTCAACAACTAACGGCAAAA+CGG | 0.515966 | 8.1:+33246580 | None:intergenic |
| TGGAGAAGGATGCAAAAGTC+AGG | 0.518290 | 8.1:-33235958 | MS.gene82941:CDS |
| ATGGAGCAACTGAAAACAAT+CGG | 0.518330 | 8.1:-33247049 | MS.gene82941:CDS |
| GAAAGAAGCGGTTAGGAAGA+AGG | 0.520105 | 8.1:-33246543 | MS.gene82941:CDS |
| AATCGGCCGCGAACTCGCCA+TGG | 0.522408 | 8.1:-33247032 | MS.gene82941:CDS |
| TTAAACAGGTAGCTGAACAT+AGG | 0.522822 | 8.1:-33246331 | MS.gene82941:CDS |
| GTGATCCCATGGCGAGTTCG+CGG | 0.523154 | 8.1:+33247026 | None:intergenic |
| ATCCAGCAGGCTATAGAAAG+TGG | 0.527579 | 8.1:-33236940 | MS.gene82941:CDS |
| GAATTTGAGGATGATGATGC+TGG | 0.528495 | 8.1:+33236598 | None:intergenic |
| AAGCAAGTCTCTGAACAAGT+TGG | 0.532860 | 8.1:+33235904 | None:intergenic |
| TTGTGGAGGAGATTGTTGAT+TGG | 0.535875 | 8.1:+33236303 | None:intergenic |
| CCGAACCAGATATCCCTAAA+CGG | 0.536714 | 8.1:-33246880 | MS.gene82941:CDS |
| ACTGCCCAAAATCCAGTGAA+TGG | 0.538629 | 8.1:-33236574 | MS.gene82941:CDS |
| TATTGGCGATATAATTAGGA+AGG | 0.540723 | 8.1:-33244989 | MS.gene82941:CDS |
| TTGTTGATTGGAGCTCTCCT+CGG | 0.541694 | 8.1:+33236315 | None:intergenic |
| CGCTCGTTCTCTGATATGTA+GGG | 0.543766 | 8.1:+33236910 | None:intergenic |
| GTGATTCATCAAGTAACATA+GGG | 0.544692 | 8.1:-33244966 | MS.gene82941:CDS |
| CTTCCCAGTGATATAGGAAG+CGG | 0.546539 | 8.1:+33242484 | None:intergenic |
| AAGTTGGGATTCTGTCCAGT+TGG | 0.548304 | 8.1:+33235920 | None:intergenic |
| ACCCTTCACAGATTGTGATA+CGG | 0.548453 | 8.1:+33236000 | None:intergenic |
| TTACTGTAGAACTAATGCTT+GGG | 0.548787 | 8.1:+33236197 | None:intergenic |
| ATGAATGGGTCCACGGTGGG+GGG | 0.550013 | 8.1:+33236241 | None:intergenic |
| TTAATGCGGTTGATTGCAGA+AGG | 0.553103 | 8.1:-33242856 | MS.gene82941:CDS |
| GATCATCAGGGCTTAAGCTA+AGG | 0.553819 | 8.1:-33236666 | MS.gene82941:CDS |
| GACTGACCTTGTTCCAGTGT+CGG | 0.553943 | 8.1:-33236749 | MS.gene82941:CDS |
| TTCATCATTAGAATATGCCT+CGG | 0.559232 | 8.1:+33242448 | None:intergenic |
| AACTTGTTCAGAGACTTGCT+TGG | 0.559297 | 8.1:-33235902 | MS.gene82941:CDS |
| GCCCGTATCACAATCTGTGA+AGG | 0.559581 | 8.1:-33236002 | MS.gene82941:CDS |
| GGTTAGGAAGAAGGCGGTCA+TGG | 0.559851 | 8.1:-33246534 | MS.gene82941:CDS |
| ATCGGCCGCGAACTCGCCAT+GGG | 0.561265 | 8.1:-33247031 | MS.gene82941:CDS |
| ATCACCTGAACGAAAGGAGC+CGG | 0.561526 | 8.1:+33246278 | None:intergenic |
| TTGTTGAGCTTCTTTCGCAT+GGG | 0.561760 | 8.1:-33246565 | MS.gene82941:CDS |
| GTCAACGATCACTTCCACAT+TGG | 0.561875 | 8.1:+33243147 | None:intergenic |
| CTTCTCTACGTTGAAATGCT+CGG | 0.563060 | 8.1:-33246833 | MS.gene82941:CDS |
| TCCAGCAGGCTATAGAAAGT+GGG | 0.565415 | 8.1:-33236939 | MS.gene82941:CDS |
| CTATATAGCTTCTCGATGTG+TGG | 0.566142 | 8.1:-33243077 | MS.gene82941:CDS |
| TCTAGTGAACAGAGTGGTGG+CGG | 0.566941 | 8.1:-33236112 | MS.gene82941:CDS |
| ATAACAATCACCTGAACGAA+AGG | 0.567560 | 8.1:+33246272 | None:intergenic |
| GGATGCAAAAGTCAGGCAGA+TGG | 0.568516 | 8.1:-33235951 | MS.gene82941:CDS |
| TTGATGGTGTTCAGAAGAAG+TGG | 0.570317 | 8.1:-33236642 | MS.gene82941:CDS |
| TGGTGCTGCAGACAGACCTC+AGG | 0.571390 | 8.1:-33236371 | MS.gene82941:CDS |
| ACAACTAACGGCAAAACGGC+AGG | 0.571577 | 8.1:+33246584 | None:intergenic |
| GATGCAAAAGTCAGGCAGAT+GGG | 0.571902 | 8.1:-33235950 | MS.gene82941:CDS |
| TTGCTGCAAATCAGTGGAGT+GGG | 0.571915 | 8.1:+33238276 | None:intergenic |
| AGTGAACAGAGTGGTGGCGG+CGG | 0.572269 | 8.1:-33236109 | MS.gene82941:CDS |
| TGAGGCTTATGAAGTTCCAA+AGG | 0.572646 | 8.1:-33236815 | MS.gene82941:CDS |
| AATAGCAGCTGGGAGGAAAG+TGG | 0.575708 | 8.1:-33239800 | MS.gene82941:CDS |
| CACTGGAACAAGGTCAGTCG+TGG | 0.576617 | 8.1:+33236753 | None:intergenic |
| GTTGGGATTCTGTCCAGTTG+GGG | 0.577231 | 8.1:+33235922 | None:intergenic |
| CCTGCTGGATATAATCATTG+AGG | 0.583089 | 8.1:+33236953 | None:intergenic |
| TGTATAAACCAATGATTACT+CGG | 0.587543 | 8.1:+33243034 | None:intergenic |
| GCAGCAGCTTCTAACAACTT+GGG | 0.588158 | 8.1:+33244892 | None:intergenic |
| AGATTGTGTGATAATGATCC+TGG | 0.589052 | 8.1:-33246446 | MS.gene82941:CDS |
| GAACGCGCCTTGTGATCCCA+TGG | 0.589618 | 8.1:+33247015 | None:intergenic |
| TGATGTTGTTCTGCAATAAG+CGG | 0.590067 | 8.1:+33244664 | None:intergenic |
| AGGCGCGTTCGGTCAATCAA+AGG | 0.591815 | 8.1:-33247002 | MS.gene82941:CDS |
| GTCGGACTCATTGTATGCGA+GGG | 0.592330 | 8.1:-33236731 | MS.gene82941:CDS |
| AGTACCTGAAGAAACACTGA+TGG | 0.594329 | 8.1:+33242648 | None:intergenic |
| TGTTATTGGTTTGGATGCAC+GGG | 0.595115 | 8.1:-33238233 | MS.gene82941:CDS |
| AGCTGCTGCATTTGACAACC+CGG | 0.596068 | 8.1:+33236057 | None:intergenic |
| GCATACAATGAGTCCGACAC+TGG | 0.596909 | 8.1:+33236736 | None:intergenic |
| TGATCATGTACTCAATCATA+CGG | 0.597576 | 8.1:+33243125 | None:intergenic |
| TACCTCTAAGCAGTCAATGA+CGG | 0.597831 | 8.1:+33244636 | None:intergenic |
| TGCCAGTTGCGAAGACATTG+AGG | 0.598185 | 8.1:-33238185 | MS.gene82941:intron |
| AATCTTCTCTCAAAACGCAC+CGG | 0.598198 | 8.1:-33246758 | MS.gene82941:CDS |
| GATTGCAGAAGGATTTGGAG+AGG | 0.602461 | 8.1:-33242845 | MS.gene82941:CDS |
| TTGCATGAATGGGTCCACGG+TGG | 0.602753 | 8.1:+33236237 | None:intergenic |
| GATGCTGGAGATGAATAAGC+TGG | 0.602865 | 8.1:+33236613 | None:intergenic |
| TGAGATCGTGATCGTCGTTG+AGG | 0.604788 | 8.1:+33246714 | None:intergenic |
| AGCGCGTTGCTGCAAATCAG+TGG | 0.605784 | 8.1:+33238270 | None:intergenic |
| AGAGAACGAGCGCTCTGGAG+CGG | 0.605954 | 8.1:-33236899 | MS.gene82941:CDS |
| TGTCGGACTCATTGTATGCG+AGG | 0.606090 | 8.1:-33236732 | MS.gene82941:CDS |
| AAGGTTCCAAAAGCTAATGT+TGG | 0.606418 | 8.1:-33236391 | MS.gene82941:CDS |
| AGCAGCTGTCAGAGGCACAA+CGG | 0.606641 | 8.1:-33236041 | MS.gene82941:CDS |
| CAGCAAGAATCTGGACAGCA+TGG | 0.608062 | 8.1:-33236847 | MS.gene82941:CDS |
| GACTCACCAGATCACGTCAG+TGG | 0.610506 | 8.1:-33236707 | MS.gene82941:CDS |
| TGATGGTGTTCAGAAGAAGT+GGG | 0.611696 | 8.1:-33236641 | MS.gene82941:CDS |
| CTATGATTATCACCAGATGC+CGG | 0.613011 | 8.1:-33246297 | MS.gene82941:CDS |
| TCCAGTGAATGGCATGACAA+AGG | 0.613450 | 8.1:-33236563 | MS.gene82941:CDS |
| TATGGAAGAGACACAGCGAA+TGG | 0.616828 | 8.1:+33244924 | None:intergenic |
| ATTCCGCTTCCTATATCACT+GGG | 0.617876 | 8.1:-33242487 | MS.gene82941:CDS |
| GAACTCGCCATGGGATCACA+AGG | 0.618854 | 8.1:-33247022 | MS.gene82941:CDS |
| CCCAAGTCAAGCAAATCTTG+TGG | 0.620345 | 8.1:+33236286 | None:intergenic |
| CAAGTTGTTAGAAGCTGCTG+CGG | 0.622141 | 8.1:-33244890 | MS.gene82941:CDS |
| CCCGTATCACAATCTGTGAA+GGG | 0.622447 | 8.1:-33236001 | MS.gene82941:CDS |
| ATGCGTTTGAAATAGCAGCT+GGG | 0.623907 | 8.1:-33239810 | MS.gene82941:CDS |
| TAGTTGCATGAATGGGTCCA+CGG | 0.625443 | 8.1:+33236234 | None:intergenic |
| GTCGTTGAGGAACAGAGTAA+CGG | 0.628932 | 8.1:+33246727 | None:intergenic |
| TCAAATGCAGCAGCTGTCAG+AGG | 0.630728 | 8.1:-33236049 | MS.gene82941:CDS |
| GAAAGAAGCTCAACAACTAA+CGG | 0.631117 | 8.1:+33246572 | None:intergenic |
| ATTGGCGATATAATTAGGAA+GGG | 0.632401 | 8.1:-33244988 | MS.gene82941:CDS |
| ACTCACCAGATCACGTCAGT+GGG | 0.633090 | 8.1:-33236706 | MS.gene82941:CDS |
| GTTGCTGCAAATCAGTGGAG+TGG | 0.633925 | 8.1:+33238275 | None:intergenic |
| CGATCTCAGCTGACTATATG+CGG | 0.636229 | 8.1:+33242813 | None:intergenic |
| GAAGTTATGCGATATGGCCG+AGG | 0.636501 | 8.1:-33242465 | MS.gene82941:CDS |
| GTCGTCGGTTTCGCATCTTG+TGG | 0.638713 | 8.1:-33246483 | MS.gene82941:CDS |
| AGTCATAATCTGAAATACAT+GGG | 0.639996 | 8.1:-33244721 | MS.gene82941:CDS |
| ATGAGTCCGACACTGGAACA+AGG | 0.640091 | 8.1:+33236743 | None:intergenic |
| GAAAGTGGATATGCTATCTG+AGG | 0.642288 | 8.1:-33239785 | MS.gene82941:intron |
| TCTTCGCAACTGGCATCATG+TGG | 0.645470 | 8.1:+33238193 | None:intergenic |
| AGAACCGCCAAACAATGAAG+CGG | 0.647321 | 8.1:+33236447 | None:intergenic |
| AAGAACATCAACTAGCAGCA+AGG | 0.653866 | 8.1:-33236410 | MS.gene82941:CDS |
| AGGTTGCACATAATTTAATG+CGG | 0.654401 | 8.1:-33242870 | MS.gene82941:CDS |
| TCTTTCGCATGGGAAAGAAG+CGG | 0.658045 | 8.1:-33246555 | MS.gene82941:CDS |
| AGAGTAGCACCCATAACACC+AGG | 0.658462 | 8.1:+33246428 | None:intergenic |
| CATCAGATACAGGATCATCA+GGG | 0.658760 | 8.1:-33236678 | MS.gene82941:CDS |
| GGCGGCTATAACTCTGCAAG+TGG | 0.660521 | 8.1:-33236091 | MS.gene82941:CDS |
| AGTGAATGGCATGACAAAGG+TGG | 0.661156 | 8.1:-33236560 | MS.gene82941:CDS |
| CCAGCAGGCTATAGAAAGTG+GGG | 0.661545 | 8.1:-33236938 | MS.gene82941:CDS |
| TACATGGGTATTGATGCTCT+CGG | 0.662992 | 8.1:-33244706 | MS.gene82941:CDS |
| AAGTCAAGCAAATCTTGTGG+AGG | 0.665010 | 8.1:+33236289 | None:intergenic |
| TAAGTGCAGCACAAACGACA+AGG | 0.667985 | 8.1:+33246642 | None:intergenic |
| TGTGCCCATTAAAGCATCCG+AGG | 0.672072 | 8.1:-33236332 | MS.gene82941:CDS |
| AATGACCAAGTCTTCCAATG+TGG | 0.681347 | 8.1:-33243161 | MS.gene82941:CDS |
| ACTTCTAGTGAACAGAGTGG+TGG | 0.689546 | 8.1:-33236115 | MS.gene82941:CDS |
| GATGGTGTTCAGAAGAAGTG+GGG | 0.704018 | 8.1:-33236640 | MS.gene82941:CDS |
| CGTTTGAAATAGCAGCTGGG+AGG | 0.708061 | 8.1:-33239807 | MS.gene82941:CDS |
| TATTATGGGACTCTATAGTG+GGG | 0.715463 | 8.1:-33236140 | MS.gene82941:CDS |
| TCGATTATAAGATCAAACAA+CGG | 0.722245 | 8.1:+33246401 | None:intergenic |
| AGAAGCGGTTAGGAAGAAGG+CGG | 0.763685 | 8.1:-33246540 | MS.gene82941:CDS |
| GCTACTTCTAGTGAACAGAG+TGG | 0.788832 | 8.1:-33236118 | MS.gene82941:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 33235898 | 33247071 | 33235898 | ID=MS.gene82941 |
| chr8.1 | mRNA | 33235898 | 33247071 | 33235898 | ID=MS.gene82941.t1;Parent=MS.gene82941 |
| chr8.1 | exon | 33246283 | 33247071 | 33246283 | ID=MS.gene82941.t1.exon1;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33246283 | 33247071 | 33246283 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33244867 | 33245082 | 33244867 | ID=MS.gene82941.t1.exon2;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33244867 | 33245082 | 33244867 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33244639 | 33244749 | 33244639 | ID=MS.gene82941.t1.exon3;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33244639 | 33244749 | 33244639 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33243033 | 33243230 | 33243033 | ID=MS.gene82941.t1.exon4;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33243033 | 33243230 | 33243033 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33242807 | 33242938 | 33242807 | ID=MS.gene82941.t1.exon5;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33242807 | 33242938 | 33242807 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33242653 | 33242709 | 33242653 | ID=MS.gene82941.t1.exon6;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33242653 | 33242709 | 33242653 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33242439 | 33242555 | 33242439 | ID=MS.gene82941.t1.exon7;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33242439 | 33242555 | 33242439 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33239786 | 33239863 | 33239786 | ID=MS.gene82941.t1.exon8;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33239786 | 33239863 | 33239786 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33238186 | 33238329 | 33238186 | ID=MS.gene82941.t1.exon9;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33238186 | 33238329 | 33238186 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| chr8.1 | exon | 33235898 | 33236995 | 33235898 | ID=MS.gene82941.t1.exon10;Parent=MS.gene82941.t1 |
| chr8.1 | CDS | 33235898 | 33236995 | 33235898 | ID=cds.MS.gene82941.t1;Parent=MS.gene82941.t1 |
| Gene Sequence |
| Protein sequence |
