Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84020.t1 | XP_013467383.1 | 93.1 | 751 | 28 | 2 | 1 | 727 | 1 | 751 | 0.00E+00 | 1330.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84020.t1 | A0A072VTK3 | 93.1 | 751 | 28 | 2 | 1 | 727 | 1 | 751 | 0.0e+00 | 1330.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053145 | MS.gene84020 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene84020 | 0.809254 | 2.07E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene84020 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene84020 | 0.807397 | 5.16E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene84020 | 0.802454 | 5.57E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene84020 | 0.829121 | 6.15E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene84020 | 0.806743 | 7.09E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84020.t1 | MTR_1g050512 | 93.076 | 751 | 28 | 2 | 1 | 727 | 1 | 751 | 0.0 | 1428 |
| MS.gene84020.t1 | MTR_1g092650 | 42.627 | 746 | 332 | 16 | 2 | 712 | 4 | 688 | 1.64e-162 | 486 |
| MS.gene84020.t1 | MTR_1g092650 | 42.627 | 746 | 331 | 16 | 2 | 712 | 4 | 687 | 1.74e-162 | 485 |
| MS.gene84020.t1 | MTR_1g010290 | 31.597 | 288 | 184 | 5 | 334 | 608 | 1089 | 1376 | 5.77e-40 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84020.t1 | AT5G04670 | 37.709 | 777 | 408 | 25 | 1 | 717 | 1 | 761 | 1.52e-130 | 405 |
| MS.gene84020.t1 | AT5G04670 | 37.709 | 777 | 408 | 25 | 1 | 717 | 1 | 761 | 1.52e-130 | 405 |
| MS.gene84020.t1 | AT4G32620 | 33.333 | 252 | 159 | 3 | 366 | 608 | 1029 | 1280 | 6.12e-37 | 150 |
| MS.gene84020.t1 | AT4G32620 | 33.333 | 252 | 159 | 3 | 366 | 608 | 1029 | 1280 | 6.75e-37 | 149 |
Find 177 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCACTATGTGCATTTAT+TGG | 0.140530 | 1.3:-32251208 | None:intergenic |
| GCAATTCATCCTTGAATTTC+AGG | 0.156044 | 1.3:-32251258 | None:intergenic |
| CTGCGCAAAGTCATCGTTAA+AGG | 0.245710 | 1.3:-32251490 | None:intergenic |
| GTCTTTCTCAGCCTCCGTTT+TGG | 0.273603 | 1.3:-32250495 | None:intergenic |
| AAGGATCATGAGGAGGAAAT+TGG | 0.288724 | 1.3:+32251232 | MS.gene84020:CDS |
| TAGAGTCAGACCGGTGTTAC+AGG | 0.313544 | 1.3:+32251710 | MS.gene84020:CDS |
| AGAAGCAAGTTCTGCCAAAC+TGG | 0.314007 | 1.3:+32251636 | MS.gene84020:CDS |
| AAAACAGTCTATGCTAATTA+GGG | 0.315920 | 1.3:+32252356 | MS.gene84020:CDS |
| ATTCCAGTGCCAGGCGTTCA+TGG | 0.318264 | 1.3:+32251991 | MS.gene84020:CDS |
| TTAACTTCAACCGAATCTTC+TGG | 0.329904 | 1.3:-32250380 | None:intergenic |
| AAGGACATTCTTGGGATTGA+TGG | 0.344141 | 1.3:+32254221 | MS.gene84020:CDS |
| GCTCGAAACACTGCTTATAA+AGG | 0.348707 | 1.3:-32251945 | None:intergenic |
| TTTCTGCTTTGCAAACATAT+TGG | 0.349589 | 1.3:+32251684 | MS.gene84020:CDS |
| AGAAGCCATTCTGTTGAATC+AGG | 0.354670 | 1.3:-32251763 | None:intergenic |
| CCAACGTCTGCCAAGGGTAC+TGG | 0.373697 | 1.3:+32251370 | MS.gene84020:CDS |
| GACTGCTGGTGCTGCAAGCT+TGG | 0.379601 | 1.3:+32250604 | MS.gene84020:CDS |
| TGCTACTCGAAGCATCATTA+AGG | 0.381433 | 1.3:-32254156 | None:intergenic |
| GGGCAACCTCGTAGTCGAAA+TGG | 0.381967 | 1.3:+32251391 | MS.gene84020:CDS |
| TTTACATCAAAAGAATCATC+TGG | 0.388038 | 1.3:-32252249 | None:intergenic |
| TTGAAGCGGTATACACCTAT+TGG | 0.392750 | 1.3:+32252316 | MS.gene84020:CDS |
| ATCGGGTCGGGTCCTTCGAT+CGG | 0.407979 | 1.3:+32250343 | MS.gene84020:CDS |
| AAGAGACAGCCAAGTCAGTT+TGG | 0.410076 | 1.3:+32253353 | MS.gene84020:CDS |
| TTCTTTCGCAGAAAATGCTT+CGG | 0.411992 | 1.3:-32253320 | None:intergenic |
| ACATAAATGCATGGGTGAAC+CGG | 0.413342 | 1.3:-32251858 | None:intergenic |
| GCACAAGCACTAGCTGTTAC+TGG | 0.414640 | 1.3:+32254176 | MS.gene84020:CDS |
| TTCCAGTGCCAGGCGTTCAT+GGG | 0.416453 | 1.3:+32251992 | MS.gene84020:CDS |
| CCAAGATGGCATCCCTTGTT+CGG | 0.418104 | 1.3:-32251827 | None:intergenic |
| TTAAGTGGCGGCGGCGGGAT+AGG | 0.418342 | 1.3:-32250434 | None:intergenic |
| CCGGTTACTTCCAGAAGATT+CGG | 0.422495 | 1.3:+32250370 | MS.gene84020:CDS |
| TTGTGGCCAAGGACATTCTT+GGG | 0.422880 | 1.3:+32254213 | MS.gene84020:CDS |
| CTAGCTGTTACTGGAGAATC+AGG | 0.424103 | 1.3:+32254185 | MS.gene84020:CDS |
| CTTCTAATTGTTAAGAGAGA+TGG | 0.424431 | 1.3:+32251781 | MS.gene84020:CDS |
| AATTGTTAAGAGAGATGGAT+TGG | 0.427432 | 1.3:+32251786 | MS.gene84020:CDS |
| GTTGTGGCCAAGGACATTCT+TGG | 0.427784 | 1.3:+32254212 | MS.gene84020:CDS |
| CCGAACAAGGGATGCCATCT+TGG | 0.431215 | 1.3:+32251827 | MS.gene84020:CDS |
| CCGGCCACTCTTTGCAGCAC+AGG | 0.431892 | 1.3:-32250690 | None:intergenic |
| CTGTACACCCTGTGATGGTT+TGG | 0.435694 | 1.3:-32250801 | None:intergenic |
| AAACCAACAAAGACGAAAAC+CGG | 0.438125 | 1.3:-32250709 | None:intergenic |
| ACTTTGTGCTGAACCCAGTT+TGG | 0.441020 | 1.3:-32251650 | None:intergenic |
| GTTATGAAGGGATCCGAATC+GGG | 0.443088 | 1.3:+32250326 | MS.gene84020:CDS |
| GGTTCTCCTCCTTCCATCAC+TGG | 0.444043 | 1.3:+32251046 | MS.gene84020:CDS |
| GTCAGTAGTCGGCAGGATCT+TGG | 0.447012 | 1.3:+32252279 | MS.gene84020:CDS |
| ATCAGTAGCTTCGGATTTAG+TGG | 0.448386 | 1.3:+32251522 | MS.gene84020:CDS |
| ATGCAGATTTGGCAACCTAC+AGG | 0.458842 | 1.3:+32254132 | MS.gene84020:CDS |
| ACCCCATGAACGCCTGGCAC+TGG | 0.458914 | 1.3:-32251994 | None:intergenic |
| ATTGGATAATGGTTGGAAGC+TGG | 0.459036 | 1.3:+32251885 | MS.gene84020:CDS |
| AAATGCACATAGTGATGATA+AGG | 0.460161 | 1.3:+32251213 | MS.gene84020:CDS |
| TGGAGGTCATACCAGAGAAC+TGG | 0.460438 | 1.3:-32251564 | None:intergenic |
| CGGCCACTCTTTGCAGCACA+GGG | 0.460736 | 1.3:-32250689 | None:intergenic |
| TCAACAATATCAGACAAAAT+CGG | 0.469196 | 1.3:-32251280 | None:intergenic |
| TCACTGATTTGAATAACATC+AGG | 0.469881 | 1.3:-32251334 | None:intergenic |
| AAATTACCTCTCAACGAACT+TGG | 0.472554 | 1.3:-32253389 | None:intergenic |
| TCGAAGGACCCGACCCGATT+CGG | 0.473579 | 1.3:-32250339 | None:intergenic |
| AATTGGTTTCCTGAAATTCA+AGG | 0.476174 | 1.3:+32251249 | MS.gene84020:CDS |
| TCGGGTCGGGTCCTTCGATC+GGG | 0.476379 | 1.3:+32250344 | MS.gene84020:CDS |
| GGTTATGAAGGGATCCGAAT+CGG | 0.476678 | 1.3:+32250325 | MS.gene84020:CDS |
| GAGCGGTAAAGCCGGTGAAA+AGG | 0.478000 | 1.3:+32250519 | MS.gene84020:CDS |
| TGCCATCTTGGTCATCCAAC+CGG | 0.478412 | 1.3:+32251839 | MS.gene84020:CDS |
| AAATGCAATATCCAGTTCTC+TGG | 0.480618 | 1.3:+32251553 | MS.gene84020:CDS |
| CCGAATCTTCTGGAAGTAAC+CGG | 0.481216 | 1.3:-32250370 | None:intergenic |
| ACACCTATTGGATGAGAAAA+CGG | 0.482965 | 1.3:+32252328 | MS.gene84020:CDS |
| CTTTAAAGAGATGCCAGTCC+TGG | 0.483499 | 1.3:-32251921 | None:intergenic |
| GGAGGAGTTCACTCAAGAAA+AGG | 0.484445 | 1.3:+32251455 | MS.gene84020:CDS |
| AGTAAGAAAAGAGAAGAAAG+TGG | 0.488356 | 1.3:+32250635 | MS.gene84020:CDS |
| GACGGAGTGGACAGGATGTA+TGG | 0.489487 | 1.3:+32250554 | MS.gene84020:CDS |
| GGCAACCTCGTAGTCGAAAT+GGG | 0.490554 | 1.3:+32251392 | MS.gene84020:CDS |
| CCTGTTGCTATTCCAGTGCC+AGG | 0.491498 | 1.3:+32251982 | MS.gene84020:CDS |
| CCTGGCACTGGAATAGCAAC+AGG | 0.497247 | 1.3:-32251982 | None:intergenic |
| ATCAATCCCAAGAATGTCCT+TGG | 0.498569 | 1.3:-32254219 | None:intergenic |
| CAACGTCTGCCAAGGGTACT+GGG | 0.498684 | 1.3:+32251371 | MS.gene84020:CDS |
| AAAACTTCTATGTCTCTTAG+TGG | 0.499781 | 1.3:-32251584 | None:intergenic |
| GGCGGTGGATAGAATGCATA+AGG | 0.502054 | 1.3:+32254028 | MS.gene84020:CDS |
| ATCTGTGGTCAGTAGTCGGC+AGG | 0.504431 | 1.3:+32252272 | MS.gene84020:CDS |
| GAAGGGATCCGAATCGGGTC+GGG | 0.504994 | 1.3:+32250331 | MS.gene84020:CDS |
| AAGTAATGGATCAGTAGCTT+CGG | 0.507359 | 1.3:+32251513 | MS.gene84020:CDS |
| ATTGTTGTTGCTTTCAGCAT+AGG | 0.507378 | 1.3:-32252022 | None:intergenic |
| CCTGTGCTGCAAAGAGTGGC+CGG | 0.513843 | 1.3:+32250690 | MS.gene84020:CDS |
| ATCCTTACCAACGTCTGCCA+AGG | 0.517440 | 1.3:+32251363 | MS.gene84020:CDS |
| GCTGGAGTTTACCGATCGCC+AGG | 0.518344 | 1.3:+32251903 | MS.gene84020:CDS |
| CTTCCATCACTGGAATCTGC+CGG | 0.519060 | 1.3:+32251056 | MS.gene84020:CDS |
| CAAAGCCGCTGTGACGAGAA+AGG | 0.519996 | 1.3:+32250460 | MS.gene84020:CDS |
| AGTTTACCGATCGCCAGGAC+TGG | 0.520174 | 1.3:+32251908 | MS.gene84020:CDS |
| ATGACTTTGCGCAGAAGTAA+TGG | 0.520985 | 1.3:+32251499 | MS.gene84020:CDS |
| GGGTCCTTCGATCGGGTCGC+CGG | 0.521578 | 1.3:+32250351 | MS.gene84020:CDS |
| GGCGCCAGTTGTACCCAAAA+CGG | 0.521873 | 1.3:+32250481 | MS.gene84020:CDS |
| TTTGTCAATGAGAATACTGC+CGG | 0.523079 | 1.3:+32251604 | MS.gene84020:CDS |
| TGCACTTGCAAAGCCGAACA+AGG | 0.525919 | 1.3:+32251814 | MS.gene84020:CDS |
| TGCTCAGATATATATGTGGC+TGG | 0.526253 | 1.3:-32252060 | None:intergenic |
| TCAGTAGCTTCGGATTTAGT+GGG | 0.530671 | 1.3:+32251523 | MS.gene84020:CDS |
| CCAATGAAAACATAAATGCA+TGG | 0.530684 | 1.3:-32251867 | None:intergenic |
| CACCATCTTCCCTGTAACAC+CGG | 0.530929 | 1.3:-32251720 | None:intergenic |
| AAAAGGAGCCGGGTCGGTGA+CGG | 0.533834 | 1.3:+32250536 | MS.gene84020:CDS |
| CAGCCAAGTCAGTTTGGTAG+AGG | 0.535226 | 1.3:+32253359 | MS.gene84020:CDS |
| AGATGCCTGATTCAACAGAA+TGG | 0.537696 | 1.3:+32251758 | MS.gene84020:CDS |
| ACGAGGTTGCCCAGTACCCT+TGG | 0.537923 | 1.3:-32251380 | None:intergenic |
| ACCCTTGGCAGACGTTGGTA+AGG | 0.538536 | 1.3:-32251365 | None:intergenic |
| GAAGAGACCCCATGAACGCC+TGG | 0.541615 | 1.3:-32252000 | None:intergenic |
| AAAGCCGGTGAAAAGGAGCC+GGG | 0.541897 | 1.3:+32250526 | MS.gene84020:CDS |
| ATCAGGAGAAGTTGTGGCCA+AGG | 0.544435 | 1.3:+32254202 | MS.gene84020:CDS |
| GGGTCGGTGACGGAGTGGAC+AGG | 0.544625 | 1.3:+32250546 | MS.gene84020:CDS |
| TAAAGCCGGTGAAAAGGAGC+CGG | 0.545137 | 1.3:+32250525 | MS.gene84020:CDS |
| CCACATATATATCTGAGCAC+GGG | 0.547333 | 1.3:+32252064 | MS.gene84020:CDS |
| GGTAGCTGAACAAGATGCCT+TGG | 0.547413 | 1.3:+32254007 | MS.gene84020:CDS |
| CTGCCTCTACCAAACTGACT+TGG | 0.548178 | 1.3:-32253362 | None:intergenic |
| CAATGAAAACATAAATGCAT+GGG | 0.550024 | 1.3:-32251866 | None:intergenic |
| TAGGTATGAGACGGTCCACT+AGG | 0.555582 | 1.3:+32250291 | MS.gene84020:CDS |
| GACCGGTGTTACAGGGAAGA+TGG | 0.559609 | 1.3:+32251718 | MS.gene84020:CDS |
| AAACCGGCAGATTCCAGTGA+TGG | 0.561380 | 1.3:-32251059 | None:intergenic |
| GTCAGATTCATCAATCAAAG+AGG | 0.569477 | 1.3:+32253285 | MS.gene84020:intron |
| TGAACAAGATGCCTTGGCGG+TGG | 0.576229 | 1.3:+32254013 | MS.gene84020:CDS |
| TGCAGATTTGGCAACCTACA+GGG | 0.576329 | 1.3:+32254133 | MS.gene84020:CDS |
| ACAGGGTGTACAGTTTCTGC+AGG | 0.577440 | 1.3:+32250811 | MS.gene84020:CDS |
| CCAGTACCCTTGGCAGACGT+TGG | 0.578814 | 1.3:-32251370 | None:intergenic |
| CGTATACTAGAAAGCGGAGA+AGG | 0.579580 | 1.3:+32250582 | MS.gene84020:CDS |
| TCCTTACCAACGTCTGCCAA+GGG | 0.580011 | 1.3:+32251364 | MS.gene84020:CDS |
| CTAGATGCATTCAGAAGAGG+AGG | 0.580727 | 1.3:+32251437 | MS.gene84020:CDS |
| TCGGCAGGATCTTGGTAGCA+TGG | 0.581768 | 1.3:+32252287 | MS.gene84020:CDS |
| TCCAGTGCCAGGCGTTCATG+GGG | 0.583739 | 1.3:+32251993 | MS.gene84020:CDS |
| GAAAGAGAACCTTCTGCAAG+TGG | 0.585591 | 1.3:+32251301 | MS.gene84020:CDS |
| CGGCAGATTCCAGTGATGGA+AGG | 0.587061 | 1.3:-32251055 | None:intergenic |
| AGAAAGCGGAGAAGGACTGC+TGG | 0.587629 | 1.3:+32250590 | MS.gene84020:CDS |
| GAAGCAAGTTCTGCCAAACT+GGG | 0.589286 | 1.3:+32251637 | MS.gene84020:CDS |
| GAAAGACCGAGCGGTAAAGC+CGG | 0.589396 | 1.3:+32250511 | MS.gene84020:CDS |
| GAGAGAACGAAGGAGATGAC+TGG | 0.590576 | 1.3:+32250411 | MS.gene84020:CDS |
| AAGATAAAGAGAGAGAACGA+AGG | 0.592927 | 1.3:+32250401 | MS.gene84020:CDS |
| TCAGATTCATCAATCAAAGA+GGG | 0.595884 | 1.3:+32253286 | MS.gene84020:intron |
| TAAAATCTGTGGTCAGTAGT+CGG | 0.596604 | 1.3:+32252268 | MS.gene84020:CDS |
| GCCACATATATATCTGAGCA+CGG | 0.597345 | 1.3:+32252063 | MS.gene84020:CDS |
| AGCTGAACAAGATGCCTTGG+CGG | 0.604732 | 1.3:+32254010 | MS.gene84020:CDS |
| TGGAGAATCAGGAGAAGTTG+TGG | 0.604884 | 1.3:+32254196 | MS.gene84020:CDS |
| ACTCTAGATGCATTCAGAAG+AGG | 0.606395 | 1.3:+32251434 | MS.gene84020:CDS |
| GAGATGCCAGTCCTGGCGAT+CGG | 0.606528 | 1.3:-32251914 | None:intergenic |
| AGAGTCAGACCGGTGTTACA+GGG | 0.606619 | 1.3:+32251711 | MS.gene84020:CDS |
| CACTGATTTGAATAACATCA+GGG | 0.607166 | 1.3:-32251333 | None:intergenic |
| TGACATGGACGCTGAAGATG+AGG | 0.609862 | 1.3:+32252128 | MS.gene84020:CDS |
| AAGCATCATTAAGGCCCTGT+AGG | 0.610386 | 1.3:-32254147 | None:intergenic |
| CCCGTGCTCAGATATATATG+TGG | 0.610797 | 1.3:-32252064 | None:intergenic |
| GAGCCGGGTCGGTGACGGAG+TGG | 0.610854 | 1.3:+32250541 | MS.gene84020:CDS |
| TGAAGGGATCCGAATCGGGT+CGG | 0.612265 | 1.3:+32250330 | MS.gene84020:CDS |
| AAGCCCTGTGCTGCAAAGAG+TGG | 0.614863 | 1.3:+32250686 | MS.gene84020:CDS |
| GACCGTCTCATACCTACCGC+CGG | 0.614906 | 1.3:-32250284 | None:intergenic |
| AACCGGTTGGATGACCAAGA+TGG | 0.614948 | 1.3:-32251841 | None:intergenic |
| GTCTCAAGAGCATGTTTCAG+AGG | 0.615748 | 1.3:+32252176 | MS.gene84020:CDS |
| TGTCCACTCCGTCACCGACC+CGG | 0.617457 | 1.3:-32250544 | None:intergenic |
| CCGGTGAAAAGGAGCCGGGT+CGG | 0.618330 | 1.3:+32250530 | MS.gene84020:CDS |
| CTGGAATAGCAACAGGACCA+TGG | 0.621104 | 1.3:-32251975 | None:intergenic |
| TGCCGGCGGTAGGTATGAGA+CGG | 0.622471 | 1.3:+32250282 | MS.gene84020:CDS |
| TAGTGATGATAAGGATCATG+AGG | 0.622607 | 1.3:+32251222 | MS.gene84020:CDS |
| CAGATTCCAGTGATGGAAGG+AGG | 0.623059 | 1.3:-32251052 | None:intergenic |
| TATTGGTTATAGAGTCAGAC+CGG | 0.623990 | 1.3:+32251701 | MS.gene84020:CDS |
| CACATATATATCTGAGCACG+GGG | 0.625244 | 1.3:+32252065 | MS.gene84020:CDS |
| AGGTATGAGACGGTCCACTA+GGG | 0.626801 | 1.3:+32250292 | MS.gene84020:CDS |
| TGAGATACATGATGGTGATG+AGG | 0.631289 | 1.3:+32250738 | MS.gene84020:CDS |
| AAATGCATGGGTGAACCGGT+TGG | 0.632842 | 1.3:-32251854 | None:intergenic |
| GTTCACAGTTACATTACCTG+AGG | 0.636371 | 1.3:+32250760 | MS.gene84020:CDS |
| GTAGCTTCGGATTTAGTGGG+TGG | 0.639037 | 1.3:+32251526 | MS.gene84020:CDS |
| ACTTCTATGTCTCTTAGTGG+AGG | 0.640511 | 1.3:-32251581 | None:intergenic |
| ATGCATTCTATCCACCGCCA+AGG | 0.641897 | 1.3:-32254024 | None:intergenic |
| TGTTTCGAGCGAAATATCCA+TGG | 0.643290 | 1.3:+32251958 | MS.gene84020:CDS |
| TAGCATGGAAGTTATTGAAG+CGG | 0.643998 | 1.3:+32252302 | MS.gene84020:CDS |
| GTAACCGGCGACCCGATCGA+AGG | 0.645454 | 1.3:-32250355 | None:intergenic |
| TGATGATAAGGATCATGAGG+AGG | 0.647896 | 1.3:+32251225 | MS.gene84020:CDS |
| AGTCAACCAAGTTCGTTGAG+AGG | 0.653009 | 1.3:+32253383 | MS.gene84020:CDS |
| TTTCTGTCCAAACCATCACA+GGG | 0.657037 | 1.3:+32250794 | MS.gene84020:CDS |
| GCACTTGCAAAGCCGAACAA+GGG | 0.662447 | 1.3:+32251815 | MS.gene84020:CDS |
| TGGACGCTGAAGATGAGGAA+TGG | 0.663026 | 1.3:+32252133 | MS.gene84020:CDS |
| CGTACGGCAATGCCGGCGGT+AGG | 0.664015 | 1.3:+32250272 | None:intergenic |
| AACCACTCCGAAAACCCTAG+TGG | 0.665327 | 1.3:-32250306 | None:intergenic |
| ATAACAGTACCACTTGCAGA+AGG | 0.666674 | 1.3:-32251310 | None:intergenic |
| GCCAGTTGTACCCAAAACGG+AGG | 0.675709 | 1.3:+32250484 | MS.gene84020:CDS |
| GTATTACGTATACTAGAAAG+CGG | 0.683047 | 1.3:+32250576 | MS.gene84020:CDS |
| AACTGCCCATTTCGACTACG+AGG | 0.690123 | 1.3:-32251397 | None:intergenic |
| AGAAACTGTACACCCTGTGA+TGG | 0.702125 | 1.3:-32250806 | None:intergenic |
| GAGAACTGCAAATTATGACA+TGG | 0.702818 | 1.3:+32252113 | MS.gene84020:CDS |
| AGATAACTAGAGCAATGACA+AGG | 0.706697 | 1.3:+32252091 | MS.gene84020:CDS |
| TGGCGCCTTTCTCGTCACAG+CGG | 0.766115 | 1.3:-32250465 | None:intergenic |
| GGAGGCTGAGAAAGACCGAG+CGG | 0.797044 | 1.3:+32250502 | MS.gene84020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATGCATATTTAATTATA+TGG | + | chr1.3:32253832-32253851 | MS.gene84020:intron | 10.0% |
| !! | AAAATATAACTAATACATGA+TGG | - | chr1.3:32252399-32252418 | None:intergenic | 15.0% |
| !! | AATTGCATTTAAAAATTACA+TGG | + | chr1.3:32252802-32252821 | MS.gene84020:intron | 15.0% |
| !! | AATTTAGTAAATCAAGTTAA+AGG | - | chr1.3:32250862-32250881 | None:intergenic | 15.0% |
| !! | ACTTGATTTACTAAATTTAT+TGG | + | chr1.3:32250865-32250884 | MS.gene84020:intron | 15.0% |
| !!! | TGTTTTTTCTTTATTCTTTA+CGG | + | chr1.3:32253519-32253538 | MS.gene84020:intron | 15.0% |
| !! | AAAAAGTCATGAAAATTACA+TGG | + | chr1.3:32252740-32252759 | MS.gene84020:intron | 20.0% |
| !! | AACCATATTAGTAAAAACAA+AGG | - | chr1.3:32252618-32252637 | None:intergenic | 20.0% |
| !! | AATGAAATACCTAAAAAACA+AGG | - | chr1.3:32253674-32253693 | None:intergenic | 20.0% |
| !! | ATCTTTATTATCATTGAGAT+TGG | - | chr1.3:32252910-32252929 | None:intergenic | 20.0% |
| !! | TAGAAATAATGCAATTTATG+TGG | + | chr1.3:32253074-32253093 | MS.gene84020:intron | 20.0% |
| !! | TTAATTATATGGTAGAACAA+CGG | + | chr1.3:32253843-32253862 | MS.gene84020:intron | 20.0% |
| !! | TTATTTACCATTTCATAACA+TGG | + | chr1.3:32253747-32253766 | MS.gene84020:intron | 20.0% |
| !!! | CATAAATTGCATTATTTCTA+TGG | - | chr1.3:32253074-32253093 | None:intergenic | 20.0% |
| !!! | TAAGAAAAGCACAATATATT+AGG | - | chr1.3:32252594-32252613 | None:intergenic | 20.0% |
| !!! | TTCCAGATTTTCAAAATATA+TGG | - | chr1.3:32252549-32252568 | None:intergenic | 20.0% |
| !!! | TTCCATATATTTTGAAAATC+TGG | + | chr1.3:32252544-32252563 | MS.gene84020:intron | 20.0% |
| !!! | TTTATGTTTTCATTGGATAA+TGG | + | chr1.3:32251874-32251893 | MS.gene84020:CDS | 20.0% |
| ! | AAAAACAGTCTATGCTAATT+AGG | + | chr1.3:32252355-32252374 | MS.gene84020:CDS | 25.0% |
| ! | AAAACAGTCTATGCTAATTA+GGG | + | chr1.3:32252356-32252375 | MS.gene84020:CDS | 25.0% |
| ! | AAATTAAGAATACTTAGGTG+TGG | + | chr1.3:32253202-32253221 | MS.gene84020:intron | 25.0% |
| ! | AACATGACCAAATAAAATAG+AGG | - | chr1.3:32253568-32253587 | None:intergenic | 25.0% |
| ! | AACATGATATTTGTACAAAC+TGG | - | chr1.3:32253614-32253633 | None:intergenic | 25.0% |
| ! | AATTAAGAATACTTAGGTGT+GGG | + | chr1.3:32253203-32253222 | MS.gene84020:intron | 25.0% |
| ! | ACGCTCTTTATATTTAACAT+AGG | - | chr1.3:32253948-32253967 | None:intergenic | 25.0% |
| ! | CAAGAAAAAATTAAGAGACA+AGG | - | chr1.3:32252775-32252794 | None:intergenic | 25.0% |
| ! | CAATGAAAACATAAATGCAT+GGG | - | chr1.3:32251869-32251888 | None:intergenic | 25.0% |
| ! | CTAAAAAACAAGGAAAATGT+AGG | - | chr1.3:32253664-32253683 | None:intergenic | 25.0% |
| ! | GAAATGGTAAATAAAGAATG+TGG | - | chr1.3:32253741-32253760 | None:intergenic | 25.0% |
| ! | GTACAAAAATTCCATCATTA+AGG | - | chr1.3:32252888-32252907 | None:intergenic | 25.0% |
| ! | TAATTATATGGTAGAACAAC+GGG | + | chr1.3:32253844-32253863 | MS.gene84020:intron | 25.0% |
| ! | TCAACAATATCAGACAAAAT+CGG | - | chr1.3:32251283-32251302 | None:intergenic | 25.0% |
| ! | TCATGATATATGTATATGCA+GGG | + | chr1.3:32251025-32251044 | MS.gene84020:intron | 25.0% |
| ! | TGATAATAAAGATGCTAGAA+TGG | + | chr1.3:32252917-32252936 | MS.gene84020:intron | 25.0% |
| ! | TGGCAAAATTAAGAATACTT+AGG | + | chr1.3:32253197-32253216 | MS.gene84020:intron | 25.0% |
| ! | TTTACATCAAAAGAATCATC+TGG | - | chr1.3:32252252-32252271 | None:intergenic | 25.0% |
| !! | TGCTTTTAGATTTTCTCTTT+AGG | + | chr1.3:32251164-32251183 | MS.gene84020:intron | 25.0% |
| !! | TTAAGGACCTCTATTTTATT+TGG | + | chr1.3:32253558-32253577 | MS.gene84020:intron | 25.0% |
| !! | TTCTTTTGATGTAAAATCTG+TGG | + | chr1.3:32252257-32252276 | MS.gene84020:CDS | 25.0% |
| !!! | AGCCTTTGTTTTTACTAATA+TGG | + | chr1.3:32252613-32252632 | MS.gene84020:intron | 25.0% |
| !!! | CTACATTTTCCTTGTTTTTT+AGG | + | chr1.3:32253662-32253681 | MS.gene84020:intron | 25.0% |
| AAAACTTCTATGTCTCTTAG+TGG | - | chr1.3:32251587-32251606 | None:intergenic | 30.0% | |
| AAATGCACATAGTGATGATA+AGG | + | chr1.3:32251213-32251232 | MS.gene84020:CDS | 30.0% | |
| AACCATGTCAACTAGATAAT+AGG | - | chr1.3:32253257-32253276 | None:intergenic | 30.0% | |
| AATCTATCTAGATGTGTTCA+AGG | - | chr1.3:32253158-32253177 | None:intergenic | 30.0% | |
| AATTGTTAAGAGAGATGGAT+TGG | + | chr1.3:32251786-32251805 | MS.gene84020:CDS | 30.0% | |
| ACCATGTCAACTAGATAATA+GGG | - | chr1.3:32253256-32253275 | None:intergenic | 30.0% | |
| AGTAAGAAAAGAGAAGAAAG+TGG | + | chr1.3:32250635-32250654 | MS.gene84020:CDS | 30.0% | |
| ATGCAATTTATGTGGTTTGA+AGG | + | chr1.3:32253082-32253101 | MS.gene84020:intron | 30.0% | |
| ATTAAGAATACTTAGGTGTG+GGG | + | chr1.3:32253204-32253223 | MS.gene84020:intron | 30.0% | |
| CCAATGAAAACATAAATGCA+TGG | - | chr1.3:32251870-32251889 | None:intergenic | 30.0% | |
| CTCATGATATATGTATATGC+AGG | + | chr1.3:32251024-32251043 | MS.gene84020:intron | 30.0% | |
| CTTCTAATTGTTAAGAGAGA+TGG | + | chr1.3:32251781-32251800 | MS.gene84020:CDS | 30.0% | |
| GAAGAATTCCTCATTTAATC+TGG | - | chr1.3:32253434-32253453 | None:intergenic | 30.0% | |
| GTATGAGTAGATAAGGATTA+AGG | + | chr1.3:32253541-32253560 | MS.gene84020:intron | 30.0% | |
| GTATTACGTATACTAGAAAG+CGG | + | chr1.3:32250576-32250595 | MS.gene84020:CDS | 30.0% | |
| GTGTTCAAGGTATATAAGAT+TGG | - | chr1.3:32253145-32253164 | None:intergenic | 30.0% | |
| TCAGATTCATCAATCAAAGA+GGG | + | chr1.3:32253286-32253305 | MS.gene84020:intron | 30.0% | |
| TCATCACTATGTGCATTTAT+TGG | - | chr1.3:32251211-32251230 | None:intergenic | 30.0% | |
| TCTTGCTAAAAATGCAGATT+TGG | + | chr1.3:32254121-32254140 | MS.gene84020:CDS | 30.0% | |
| TGCAATTTATGTGGTTTGAA+GGG | + | chr1.3:32253083-32253102 | MS.gene84020:intron | 30.0% | |
| TGCAGATACTCAAAATAAAC+CGG | - | chr1.3:32251136-32251155 | None:intergenic | 30.0% | |
| TTTCTGCTTTGCAAACATAT+TGG | + | chr1.3:32251684-32251703 | MS.gene84020:CDS | 30.0% | |
| ! | AATTGGTTTCCTGAAATTCA+AGG | + | chr1.3:32251249-32251268 | MS.gene84020:CDS | 30.0% |
| ! | CCATGCATTTATGTTTTCAT+TGG | + | chr1.3:32251867-32251886 | MS.gene84020:CDS | 30.0% |
| ! | TATGCTAATTAGGGTTTTTG+AGG | + | chr1.3:32252365-32252384 | MS.gene84020:CDS | 30.0% |
| ! | TTCAGTTAGTTTGAATACTG+TGG | + | chr1.3:32253024-32253043 | MS.gene84020:intron | 30.0% |
| ! | TTTTCTCTCGATCTAAGTTT+TGG | + | chr1.3:32253177-32253196 | MS.gene84020:intron | 30.0% |
| !! | AATCATTGATGCTTTTGAGA+AGG | + | chr1.3:32252212-32252231 | MS.gene84020:CDS | 30.0% |
| !! | CACTGATTTGAATAACATCA+GGG | - | chr1.3:32251336-32251355 | None:intergenic | 30.0% |
| !! | TCACTGATTTGAATAACATC+AGG | - | chr1.3:32251337-32251356 | None:intergenic | 30.0% |
| !! | TGTTTTCATTGGATAATGGT+TGG | + | chr1.3:32251878-32251897 | MS.gene84020:CDS | 30.0% |
| !!! | CTTGTATTGATTTTCAGCAA+TGG | + | chr1.3:32253986-32254005 | MS.gene84020:intron | 30.0% |
| !!! | TTCGATTTTGAGATACATGA+TGG | + | chr1.3:32250730-32250749 | MS.gene84020:CDS | 30.0% |
| AAACCAACAAAGACGAAAAC+CGG | - | chr1.3:32250712-32250731 | None:intergenic | 35.0% | |
| AAATGCAATATCCAGTTCTC+TGG | + | chr1.3:32251553-32251572 | MS.gene84020:CDS | 35.0% | |
| AAATTACCTCTCAACGAACT+TGG | - | chr1.3:32253392-32253411 | None:intergenic | 35.0% | |
| AAGATAAAGAGAGAGAACGA+AGG | + | chr1.3:32250401-32250420 | MS.gene84020:CDS | 35.0% | |
| ACACCTATTGGATGAGAAAA+CGG | + | chr1.3:32252328-32252347 | MS.gene84020:CDS | 35.0% | |
| ACTGTGTGATCTCAAAAAAC+CGG | - | chr1.3:32251078-32251097 | None:intergenic | 35.0% | |
| AGAAAAAAGGCAAAAACCTC+AGG | - | chr1.3:32250779-32250798 | None:intergenic | 35.0% | |
| AGATAACTAGAGCAATGACA+AGG | + | chr1.3:32252091-32252110 | MS.gene84020:CDS | 35.0% | |
| AGTAATTCTTGGGAAGACAA+CGG | - | chr1.3:32252494-32252513 | None:intergenic | 35.0% | |
| CAAGCAAGAACGAATAAAAG+TGG | - | chr1.3:32252695-32252714 | None:intergenic | 35.0% | |
| CATACACACCAGTAATTCTT+GGG | - | chr1.3:32252504-32252523 | None:intergenic | 35.0% | |
| CCAAGTACCATGTTATGAAA+TGG | - | chr1.3:32253757-32253776 | None:intergenic | 35.0% | |
| CCATTTCATAACATGGTACT+TGG | + | chr1.3:32253754-32253773 | MS.gene84020:intron | 35.0% | |
| CTGGAAGTTCACATGTATTA+TGG | + | chr1.3:32252563-32252582 | MS.gene84020:intron | 35.0% | |
| CTTTACGGTATGAGTAGATA+AGG | + | chr1.3:32253534-32253553 | MS.gene84020:intron | 35.0% | |
| GAAAAATCAACAGAGAACGA+TGG | - | chr1.3:32251106-32251125 | None:intergenic | 35.0% | |
| GAGAACTGCAAATTATGACA+TGG | + | chr1.3:32252113-32252132 | MS.gene84020:CDS | 35.0% | |
| GCAATTCATCCTTGAATTTC+AGG | - | chr1.3:32251261-32251280 | None:intergenic | 35.0% | |
| GCAATTTATGTGGTTTGAAG+GGG | + | chr1.3:32253084-32253103 | MS.gene84020:intron | 35.0% | |
| GTCAGATTCATCAATCAAAG+AGG | + | chr1.3:32253285-32253304 | MS.gene84020:intron | 35.0% | |
| GTCTTCAACCAGATTAAATG+AGG | + | chr1.3:32253423-32253442 | MS.gene84020:intron | 35.0% | |
| GTGGCTAGAAACACTTATTT+GGG | - | chr1.3:32252982-32253001 | None:intergenic | 35.0% | |
| TAAAATCTGTGGTCAGTAGT+CGG | + | chr1.3:32252268-32252287 | MS.gene84020:CDS | 35.0% | |
| TAGCATGGAAGTTATTGAAG+CGG | + | chr1.3:32252302-32252321 | MS.gene84020:CDS | 35.0% | |
| TAGTGATGATAAGGATCATG+AGG | + | chr1.3:32251222-32251241 | MS.gene84020:CDS | 35.0% | |
| TCATACACACCAGTAATTCT+TGG | - | chr1.3:32252505-32252524 | None:intergenic | 35.0% | |
| TCCCTATTATCTAGTTGACA+TGG | + | chr1.3:32253252-32253271 | MS.gene84020:intron | 35.0% | |
| TGGCTAGAAACACTTATTTG+GGG | - | chr1.3:32252981-32253000 | None:intergenic | 35.0% | |
| TGTGGCTAGAAACACTTATT+TGG | - | chr1.3:32252983-32253002 | None:intergenic | 35.0% | |
| TTAACTTCAACCGAATCTTC+TGG | - | chr1.3:32250383-32250402 | None:intergenic | 35.0% | |
| TTCTTTCGCAGAAAATGCTT+CGG | - | chr1.3:32253323-32253342 | None:intergenic | 35.0% | |
| TTTGTCAATGAGAATACTGC+CGG | + | chr1.3:32251604-32251623 | MS.gene84020:CDS | 35.0% | |
| ! | AACACTTATTTGGGGTGTAA+TGG | - | chr1.3:32252973-32252992 | None:intergenic | 35.0% |
| ! | AAGACAACGGACATTGTTTT+GGG | - | chr1.3:32252481-32252500 | None:intergenic | 35.0% |
| ! | ACACTTATTTGGGGTGTAAT+GGG | - | chr1.3:32252972-32252991 | None:intergenic | 35.0% |
| ! | ACTTGCTTCTTTTAAGCTTC+CGG | - | chr1.3:32251626-32251645 | None:intergenic | 35.0% |
| ! | TATTGGTTATAGAGTCAGAC+CGG | + | chr1.3:32251701-32251720 | MS.gene84020:CDS | 35.0% |
| ! | TGATGGTTTGGACAGAAAAA+AGG | - | chr1.3:32250792-32250811 | None:intergenic | 35.0% |
| !! | AAGTAATGGATCAGTAGCTT+CGG | + | chr1.3:32251513-32251532 | MS.gene84020:CDS | 35.0% |
| !! | ATAAGTGTTTCTAGCCACAT+TGG | + | chr1.3:32252984-32253003 | MS.gene84020:intron | 35.0% |
| !! | ATTGTTGTTGCTTTCAGCAT+AGG | - | chr1.3:32252025-32252044 | None:intergenic | 35.0% |
| !! | TTGCATTATTTCTATGGCAC+TGG | - | chr1.3:32253068-32253087 | None:intergenic | 35.0% |
| !! | TTTTTCAATGGCTGTTTCAG+TGG | - | chr1.3:32254084-32254103 | None:intergenic | 35.0% |
| !!! | CTATGGTTGGTGTTGAATTT+TGG | + | chr1.3:32253490-32253509 | MS.gene84020:intron | 35.0% |
| !!! | TGTTGATTTTTCTGCTGTTC+CGG | + | chr1.3:32251114-32251133 | MS.gene84020:CDS | 35.0% |
| !!! | TGTTTTGACTCCAAACATGT+TGG | + | chr1.3:32253461-32253480 | MS.gene84020:intron | 35.0% |
| !!! | TTCAGTGGATTTTTTTGCTG+AGG | - | chr1.3:32254069-32254088 | None:intergenic | 35.0% |
| AAGGACATTCTTGGGATTGA+TGG | + | chr1.3:32254221-32254240 | MS.gene84020:CDS | 40.0% | |
| AAGGATCATGAGGAGGAAAT+TGG | + | chr1.3:32251232-32251251 | MS.gene84020:CDS | 40.0% | |
| ACATAAATGCATGGGTGAAC+CGG | - | chr1.3:32251861-32251880 | None:intergenic | 40.0% | |
| ACTCTAGATGCATTCAGAAG+AGG | + | chr1.3:32251434-32251453 | MS.gene84020:CDS | 40.0% | |
| ACTTCTATGTCTCTTAGTGG+AGG | - | chr1.3:32251584-32251603 | None:intergenic | 40.0% | |
| AGAAGCCATTCTGTTGAATC+AGG | - | chr1.3:32251766-32251785 | None:intergenic | 40.0% | |
| AGATGCCTGATTCAACAGAA+TGG | + | chr1.3:32251758-32251777 | MS.gene84020:CDS | 40.0% | |
| AGCCATTGAAAAACGCAAAG+AGG | + | chr1.3:32254091-32254110 | MS.gene84020:CDS | 40.0% | |
| ATAACAGTACCACTTGCAGA+AGG | - | chr1.3:32251313-32251332 | None:intergenic | 40.0% | |
| ATAGTGAAGGCCAACATGTT+TGG | - | chr1.3:32253474-32253493 | None:intergenic | 40.0% | |
| ATCAATCCCAAGAATGTCCT+TGG | - | chr1.3:32254222-32254241 | None:intergenic | 40.0% | |
| ATCAGTAGCTTCGGATTTAG+TGG | + | chr1.3:32251522-32251541 | MS.gene84020:CDS | 40.0% | |
| ATGACTTTGCGCAGAAGTAA+TGG | + | chr1.3:32251499-32251518 | MS.gene84020:CDS | 40.0% | |
| CACATATATATCTGAGCACG+GGG | + | chr1.3:32252065-32252084 | MS.gene84020:CDS | 40.0% | |
| CCACATATATATCTGAGCAC+GGG | + | chr1.3:32252064-32252083 | MS.gene84020:CDS | 40.0% | |
| CCACTAGTGATCCTTAATGA+TGG | + | chr1.3:32252874-32252893 | MS.gene84020:intron | 40.0% | |
| CCATCATTAAGGATCACTAG+TGG | - | chr1.3:32252877-32252896 | None:intergenic | 40.0% | |
| CTTCTGTTCTTAAGTCGCAA+TGG | + | chr1.3:32253879-32253898 | MS.gene84020:intron | 40.0% | |
| GCCACATATATATCTGAGCA+CGG | + | chr1.3:32252063-32252082 | MS.gene84020:CDS | 40.0% | |
| GCTCGAAACACTGCTTATAA+AGG | - | chr1.3:32251948-32251967 | None:intergenic | 40.0% | |
| GTGTATGAGCTGTGGTAAAA+TGG | + | chr1.3:32252517-32252536 | MS.gene84020:intron | 40.0% | |
| GTTCACAGTTACATTACCTG+AGG | + | chr1.3:32250760-32250779 | MS.gene84020:CDS | 40.0% | |
| GTTCTTGCTTGTCTGCAAAT+TGG | + | chr1.3:32252704-32252723 | MS.gene84020:intron | 40.0% | |
| GTTGTCTTCCCAAGAATTAC+TGG | + | chr1.3:32252493-32252512 | MS.gene84020:intron | 40.0% | |
| TAAAGATGCTAGAATGGCAC+CGG | + | chr1.3:32252923-32252942 | MS.gene84020:intron | 40.0% | |
| TCAGTAGCTTCGGATTTAGT+GGG | + | chr1.3:32251523-32251542 | MS.gene84020:CDS | 40.0% | |
| TGATGATAAGGATCATGAGG+AGG | + | chr1.3:32251225-32251244 | MS.gene84020:CDS | 40.0% | |
| TGCTCAGATATATATGTGGC+TGG | - | chr1.3:32252063-32252082 | None:intergenic | 40.0% | |
| TGTTTCGAGCGAAATATCCA+TGG | + | chr1.3:32251958-32251977 | MS.gene84020:CDS | 40.0% | |
| TTCAACACCAACCATAGTGA+AGG | - | chr1.3:32253487-32253506 | None:intergenic | 40.0% | |
| TTGAAGCGGTATACACCTAT+TGG | + | chr1.3:32252316-32252335 | MS.gene84020:CDS | 40.0% | |
| TTTCTGTCCAAACCATCACA+GGG | + | chr1.3:32250794-32250813 | MS.gene84020:CDS | 40.0% | |
| ! | AGCATTTTCTGCGAAAGAAG+AGG | + | chr1.3:32253324-32253343 | MS.gene84020:CDS | 40.0% |
| ! | ATTGGATAATGGTTGGAAGC+TGG | + | chr1.3:32251885-32251904 | MS.gene84020:CDS | 40.0% |
| ! | CTTCCGTTTTCTCATCCAAT+AGG | - | chr1.3:32252334-32252353 | None:intergenic | 40.0% |
| ! | GAAGACAACGGACATTGTTT+TGG | - | chr1.3:32252482-32252501 | None:intergenic | 40.0% |
| ! | GTTTTCGGAGTGGTTATGAA+GGG | + | chr1.3:32250314-32250333 | MS.gene84020:CDS | 40.0% |
| ! | TGAGATACATGATGGTGATG+AGG | + | chr1.3:32250738-32250757 | MS.gene84020:CDS | 40.0% |
| ! | TGCTACTCGAAGCATCATTA+AGG | - | chr1.3:32254159-32254178 | None:intergenic | 40.0% |
| ! | TTTCTAGCCACATTGGTTGA+GGG | + | chr1.3:32252991-32253010 | MS.gene84020:intron | 40.0% |
| ! | TTTTCTGTCCAAACCATCAC+AGG | + | chr1.3:32250793-32250812 | MS.gene84020:CDS | 40.0% |
| !! | AAACATGTTGGCCTTCACTA+TGG | + | chr1.3:32253473-32253492 | MS.gene84020:intron | 40.0% |
| !! | AGCCTCTTTGCGTTTTTCAA+TGG | - | chr1.3:32254096-32254115 | None:intergenic | 40.0% |
| !!! | ACAGCGGCTTTGTTTTTAAG+TGG | - | chr1.3:32250452-32250471 | None:intergenic | 40.0% |
| !!! | CTAAGCCCTTGCTTTTTATG+TGG | + | chr1.3:32252666-32252685 | MS.gene84020:intron | 40.0% |
| AAGAGACAGCCAAGTCAGTT+TGG | + | chr1.3:32253353-32253372 | MS.gene84020:CDS | 45.0% | |
| AAGCATCATTAAGGCCCTGT+AGG | - | chr1.3:32254150-32254169 | None:intergenic | 45.0% | |
| ACTGGAAATTGCATCCGTCA+CGG | - | chr1.3:32253050-32253069 | None:intergenic | 45.0% | |
| ACTTTGTGCTGAACCCAGTT+TGG | - | chr1.3:32251653-32251672 | None:intergenic | 45.0% | |
| AGAAACTGTACACCCTGTGA+TGG | - | chr1.3:32250809-32250828 | None:intergenic | 45.0% | |
| AGAAGCAAGTTCTGCCAAAC+TGG | + | chr1.3:32251636-32251655 | MS.gene84020:CDS | 45.0% | |
| AGTCAACCAAGTTCGTTGAG+AGG | + | chr1.3:32253383-32253402 | MS.gene84020:CDS | 45.0% | |
| ATGCAGATTTGGCAACCTAC+AGG | + | chr1.3:32254132-32254151 | MS.gene84020:CDS | 45.0% | |
| CATCCCTTGCTTTGGTTAAC+CGG | - | chr1.3:32252945-32252964 | None:intergenic | 45.0% | |
| CCCGTGCTCAGATATATATG+TGG | - | chr1.3:32252067-32252086 | None:intergenic | 45.0% | |
| CCGGTTACTTCCAGAAGATT+CGG | + | chr1.3:32250370-32250389 | MS.gene84020:CDS | 45.0% | |
| CGTATACTAGAAAGCGGAGA+AGG | + | chr1.3:32250582-32250601 | MS.gene84020:CDS | 45.0% | |
| CTAGATGCATTCAGAAGAGG+AGG | + | chr1.3:32251437-32251456 | MS.gene84020:CDS | 45.0% | |
| CTAGCTGTTACTGGAGAATC+AGG | + | chr1.3:32254185-32254204 | MS.gene84020:CDS | 45.0% | |
| CTGCGCAAAGTCATCGTTAA+AGG | - | chr1.3:32251493-32251512 | None:intergenic | 45.0% | |
| GAAAGAGAACCTTCTGCAAG+TGG | + | chr1.3:32251301-32251320 | MS.gene84020:CDS | 45.0% | |
| GAAGCAAGTTCTGCCAAACT+GGG | + | chr1.3:32251637-32251656 | MS.gene84020:CDS | 45.0% | |
| GGAGGAGTTCACTCAAGAAA+AGG | + | chr1.3:32251455-32251474 | MS.gene84020:CDS | 45.0% | |
| GGCCTCCACATAAAAAGCAA+GGG | - | chr1.3:32252674-32252693 | None:intergenic | 45.0% | |
| GGTTATGAAGGGATCCGAAT+CGG | + | chr1.3:32250325-32250344 | MS.gene84020:CDS | 45.0% | |
| GTTATGAAGGGATCCGAATC+GGG | + | chr1.3:32250326-32250345 | MS.gene84020:CDS | 45.0% | |
| TGCAGATTTGGCAACCTACA+GGG | + | chr1.3:32254133-32254152 | MS.gene84020:CDS | 45.0% | |
| TGGAGAATCAGGAGAAGTTG+TGG | + | chr1.3:32254196-32254215 | MS.gene84020:CDS | 45.0% | |
| TGGCCTCCACATAAAAAGCA+AGG | - | chr1.3:32252675-32252694 | None:intergenic | 45.0% | |
| TGGGATTTCATCCCTTGCTT+TGG | - | chr1.3:32252953-32252972 | None:intergenic | 45.0% | |
| TTACTGGTGTGTATGAGCTG+TGG | + | chr1.3:32252509-32252528 | MS.gene84020:intron | 45.0% | |
| TTGTGGCCAAGGACATTCTT+GGG | + | chr1.3:32254213-32254232 | MS.gene84020:CDS | 45.0% | |
| TTTGAATACTGTGGCCGTGA+CGG | + | chr1.3:32253033-32253052 | MS.gene84020:intron | 45.0% | |
| ! | CCGAATCTTCTGGAAGTAAC+CGG | - | chr1.3:32250373-32250392 | None:intergenic | 45.0% |
| ! | CTTTAAAGAGATGCCAGTCC+TGG | - | chr1.3:32251924-32251943 | None:intergenic | 45.0% |
| ! | GGTTTTCGGAGTGGTTATGA+AGG | + | chr1.3:32250313-32250332 | MS.gene84020:CDS | 45.0% |
| ! | GTCTCAAGAGCATGTTTCAG+AGG | + | chr1.3:32252176-32252195 | MS.gene84020:CDS | 45.0% |
| ! | TCTTTCTCAGCCTCCGTTTT+GGG | - | chr1.3:32250497-32250516 | None:intergenic | 45.0% |
| !! | ATGTTGGCCTTCACTATGGT+TGG | + | chr1.3:32253477-32253496 | MS.gene84020:intron | 45.0% |
| !! | GTTTCTAGCCACATTGGTTG+AGG | + | chr1.3:32252990-32253009 | MS.gene84020:intron | 45.0% |
| !!! | AGCCCTTGCTTTTTATGTGG+AGG | + | chr1.3:32252669-32252688 | MS.gene84020:intron | 45.0% |
| !!! | CGGACATTGTTTTGGGACTT+AGG | - | chr1.3:32252474-32252493 | None:intergenic | 45.0% |
| !!! | GCGGCTTTGTTTTTAAGTGG+CGG | - | chr1.3:32250449-32250468 | None:intergenic | 45.0% |
| !!! | GCTTTGTTTTTAAGTGGCGG+CGG | - | chr1.3:32250446-32250465 | None:intergenic | 45.0% |
| AAACCGGCAGATTCCAGTGA+TGG | - | chr1.3:32251062-32251081 | None:intergenic | 50.0% | |
| AAATGCATGGGTGAACCGGT+TGG | - | chr1.3:32251857-32251876 | None:intergenic | 50.0% | |
| AACCACTCCGAAAACCCTAG+TGG | - | chr1.3:32250309-32250328 | None:intergenic | 50.0% | |
| AACCGGTTGGATGACCAAGA+TGG | - | chr1.3:32251844-32251863 | None:intergenic | 50.0% | |
| AACTGCCCATTTCGACTACG+AGG | - | chr1.3:32251400-32251419 | None:intergenic | 50.0% | |
| ACAGGGTGTACAGTTTCTGC+AGG | + | chr1.3:32250811-32250830 | MS.gene84020:CDS | 50.0% | |
| AGCTGAACAAGATGCCTTGG+CGG | + | chr1.3:32254010-32254029 | MS.gene84020:CDS | 50.0% | |
| AGGTATGAGACGGTCCACTA+GGG | + | chr1.3:32250292-32250311 | MS.gene84020:CDS | 50.0% | |
| ATCAGGAGAAGTTGTGGCCA+AGG | + | chr1.3:32254202-32254221 | MS.gene84020:CDS | 50.0% | |
| ATCCTTACCAACGTCTGCCA+AGG | + | chr1.3:32251363-32251382 | MS.gene84020:CDS | 50.0% | |
| ATGCATTCTATCCACCGCCA+AGG | - | chr1.3:32254027-32254046 | None:intergenic | 50.0% | |
| CACCATCTTCCCTGTAACAC+CGG | - | chr1.3:32251723-32251742 | None:intergenic | 50.0% | |
| CAGCCAAGTCAGTTTGGTAG+AGG | + | chr1.3:32253359-32253378 | MS.gene84020:CDS | 50.0% | |
| CCAAGATGGCATCCCTTGTT+CGG | - | chr1.3:32251830-32251849 | None:intergenic | 50.0% | |
| CTGCCTCTACCAAACTGACT+TGG | - | chr1.3:32253365-32253384 | None:intergenic | 50.0% | |
| CTGGAATAGCAACAGGACCA+TGG | - | chr1.3:32251978-32251997 | None:intergenic | 50.0% | |
| CTGTACACCCTGTGATGGTT+TGG | - | chr1.3:32250804-32250823 | None:intergenic | 50.0% | |
| CTTCCATCACTGGAATCTGC+CGG | + | chr1.3:32251056-32251075 | MS.gene84020:CDS | 50.0% | |
| GAGAGAACGAAGGAGATGAC+TGG | + | chr1.3:32250411-32250430 | MS.gene84020:CDS | 50.0% | |
| GCACAAGCACTAGCTGTTAC+TGG | + | chr1.3:32254176-32254195 | MS.gene84020:CDS | 50.0% | |
| GCACTTGCAAAGCCGAACAA+GGG | + | chr1.3:32251815-32251834 | MS.gene84020:CDS | 50.0% | |
| GGCAACCTCGTAGTCGAAAT+GGG | + | chr1.3:32251392-32251411 | MS.gene84020:CDS | 50.0% | |
| GGCGGTGGATAGAATGCATA+AGG | + | chr1.3:32254028-32254047 | MS.gene84020:CDS | 50.0% | |
| GGTAGCTGAACAAGATGCCT+TGG | + | chr1.3:32254007-32254026 | MS.gene84020:CDS | 50.0% | |
| GTAGCTTCGGATTTAGTGGG+TGG | + | chr1.3:32251526-32251545 | MS.gene84020:CDS | 50.0% | |
| GTTGTGGCCAAGGACATTCT+TGG | + | chr1.3:32254212-32254231 | MS.gene84020:CDS | 50.0% | |
| TAAAGCCGGTGAAAAGGAGC+CGG | + | chr1.3:32250525-32250544 | MS.gene84020:CDS | 50.0% | |
| TAGGTATGAGACGGTCCACT+AGG | + | chr1.3:32250291-32250310 | MS.gene84020:CDS | 50.0% | |
| TCCTTACCAACGTCTGCCAA+GGG | + | chr1.3:32251364-32251383 | MS.gene84020:CDS | 50.0% | |
| TCGTTTGCCCTCAACCAATG+TGG | - | chr1.3:32253001-32253020 | None:intergenic | 50.0% | |
| TGACATGGACGCTGAAGATG+AGG | + | chr1.3:32252128-32252147 | MS.gene84020:CDS | 50.0% | |
| TGCACTTGCAAAGCCGAACA+AGG | + | chr1.3:32251814-32251833 | MS.gene84020:CDS | 50.0% | |
| TGCCATCTTGGTCATCCAAC+CGG | + | chr1.3:32251839-32251858 | MS.gene84020:CDS | 50.0% | |
| TGGACGCTGAAGATGAGGAA+TGG | + | chr1.3:32252133-32252152 | MS.gene84020:CDS | 50.0% | |
| TGGAGGTCATACCAGAGAAC+TGG | - | chr1.3:32251567-32251586 | None:intergenic | 50.0% | |
| ! | AGACGGTCCACTAGGGTTTT+CGG | + | chr1.3:32250299-32250318 | MS.gene84020:CDS | 50.0% |
| ! | CAGATTCCAGTGATGGAAGG+AGG | - | chr1.3:32251055-32251074 | None:intergenic | 50.0% |
| ! | GTCTTTCTCAGCCTCCGTTT+TGG | - | chr1.3:32250498-32250517 | None:intergenic | 50.0% |
| !! | AGAGTCAGACCGGTGTTACA+GGG | + | chr1.3:32251711-32251730 | MS.gene84020:CDS | 50.0% |
| !! | GCACCGGTTAACCAAAGCAA+GGG | + | chr1.3:32252939-32252958 | MS.gene84020:intron | 50.0% |
| !! | TAGAGTCAGACCGGTGTTAC+AGG | + | chr1.3:32251710-32251729 | MS.gene84020:CDS | 50.0% |
| !! | TGGCCGGTTTTCGTCTTTGT+TGG | + | chr1.3:32250706-32250725 | MS.gene84020:CDS | 50.0% |
| !!! | TTGTTTTTAAGTGGCGGCGG+CGG | - | chr1.3:32250443-32250462 | None:intergenic | 50.0% |
| !!! | TTTTCACCGGCTTTACCGCT+CGG | - | chr1.3:32250520-32250539 | None:intergenic | 50.0% |
| AAAGCCGGTGAAAAGGAGCC+GGG | + | chr1.3:32250526-32250545 | MS.gene84020:CDS | 55.0% | |
| AAGCCCTGTGCTGCAAAGAG+TGG | + | chr1.3:32250686-32250705 | MS.gene84020:CDS | 55.0% | |
| ACCCTTGGCAGACGTTGGTA+AGG | - | chr1.3:32251368-32251387 | None:intergenic | 55.0% | |
| AGAAAGCGGAGAAGGACTGC+TGG | + | chr1.3:32250590-32250609 | MS.gene84020:CDS | 55.0% | |
| AGTTTACCGATCGCCAGGAC+TGG | + | chr1.3:32251908-32251927 | MS.gene84020:CDS | 55.0% | |
| ATCTGTGGTCAGTAGTCGGC+AGG | + | chr1.3:32252272-32252291 | MS.gene84020:CDS | 55.0% | |
| ATTCCAGTGCCAGGCGTTCA+TGG | + | chr1.3:32251991-32252010 | MS.gene84020:CDS | 55.0% | |
| CAAAGCCGCTGTGACGAGAA+AGG | + | chr1.3:32250460-32250479 | MS.gene84020:CDS | 55.0% | |
| CCGAACAAGGGATGCCATCT+TGG | + | chr1.3:32251827-32251846 | MS.gene84020:CDS | 55.0% | |
| GAAAGACCGAGCGGTAAAGC+CGG | + | chr1.3:32250511-32250530 | MS.gene84020:CDS | 55.0% | |
| GACGGAGTGGACAGGATGTA+TGG | + | chr1.3:32250554-32250573 | MS.gene84020:CDS | 55.0% | |
| GAGCGGTAAAGCCGGTGAAA+AGG | + | chr1.3:32250519-32250538 | MS.gene84020:CDS | 55.0% | |
| GCCAGTTGTACCCAAAACGG+AGG | + | chr1.3:32250484-32250503 | MS.gene84020:CDS | 55.0% | |
| GGCGCCAGTTGTACCCAAAA+CGG | + | chr1.3:32250481-32250500 | MS.gene84020:CDS | 55.0% | |
| GGGCAACCTCGTAGTCGAAA+TGG | + | chr1.3:32251391-32251410 | MS.gene84020:CDS | 55.0% | |
| GGTTCTCCTCCTTCCATCAC+TGG | + | chr1.3:32251046-32251065 | MS.gene84020:CDS | 55.0% | |
| GTCAGTAGTCGGCAGGATCT+TGG | + | chr1.3:32252279-32252298 | MS.gene84020:CDS | 55.0% | |
| TGAACAAGATGCCTTGGCGG+TGG | + | chr1.3:32254013-32254032 | MS.gene84020:CDS | 55.0% | |
| TGAAGGGATCCGAATCGGGT+CGG | + | chr1.3:32250330-32250349 | MS.gene84020:CDS | 55.0% | |
| TTCCAGTGCCAGGCGTTCAT+GGG | + | chr1.3:32251992-32252011 | MS.gene84020:CDS | 55.0% | |
| ! | CCTGGCACTGGAATAGCAAC+AGG | - | chr1.3:32251985-32252004 | None:intergenic | 55.0% |
| ! | CCTGTTGCTATTCCAGTGCC+AGG | + | chr1.3:32251982-32252001 | MS.gene84020:CDS | 55.0% |
| ! | CGGCAGATTCCAGTGATGGA+AGG | - | chr1.3:32251058-32251077 | None:intergenic | 55.0% |
| ! | GTCCACTAGGGTTTTCGGAG+TGG | + | chr1.3:32250304-32250323 | MS.gene84020:CDS | 55.0% |
| ! | TCGGCAGGATCTTGGTAGCA+TGG | + | chr1.3:32252287-32252306 | MS.gene84020:CDS | 55.0% |
| !! | CAACGTCTGCCAAGGGTACT+GGG | + | chr1.3:32251371-32251390 | MS.gene84020:CDS | 55.0% |
| !! | GACCGGTGTTACAGGGAAGA+TGG | + | chr1.3:32251718-32251737 | MS.gene84020:CDS | 55.0% |
| !! | GCCTCCGTTTTGGGTACAAC+TGG | - | chr1.3:32250488-32250507 | None:intergenic | 55.0% |
| !! | GGCACCGGTTAACCAAAGCA+AGG | + | chr1.3:32252938-32252957 | MS.gene84020:intron | 55.0% |
| !!! | TGTTTTTAAGTGGCGGCGGC+GGG | - | chr1.3:32250442-32250461 | None:intergenic | 55.0% |
| AAAAGGAGCCGGGTCGGTGA+CGG | + | chr1.3:32250536-32250555 | MS.gene84020:CDS | 60.0% | |
| ACGAGGTTGCCCAGTACCCT+TGG | - | chr1.3:32251383-32251402 | None:intergenic | 60.0% | |
| ATCGGGTCGGGTCCTTCGAT+CGG | + | chr1.3:32250343-32250362 | MS.gene84020:CDS | 60.0% | |
| CCAGTACCCTTGGCAGACGT+TGG | - | chr1.3:32251373-32251392 | None:intergenic | 60.0% | |
| CCTGTGCTGCAAAGAGTGGC+CGG | + | chr1.3:32250690-32250709 | MS.gene84020:CDS | 60.0% | |
| CGGCCACTCTTTGCAGCACA+GGG | - | chr1.3:32250692-32250711 | None:intergenic | 60.0% | |
| GAAGAGACCCCATGAACGCC+TGG | - | chr1.3:32252003-32252022 | None:intergenic | 60.0% | |
| GAAGGGATCCGAATCGGGTC+GGG | + | chr1.3:32250331-32250350 | MS.gene84020:CDS | 60.0% | |
| GACCGTCTCATACCTACCGC+CGG | - | chr1.3:32250287-32250306 | None:intergenic | 60.0% | |
| GAGATGCCAGTCCTGGCGAT+CGG | - | chr1.3:32251917-32251936 | None:intergenic | 60.0% | |
| GCTGGAGTTTACCGATCGCC+AGG | + | chr1.3:32251903-32251922 | MS.gene84020:CDS | 60.0% | |
| GGAGGCTGAGAAAGACCGAG+CGG | + | chr1.3:32250502-32250521 | MS.gene84020:CDS | 60.0% | |
| TCCAGTGCCAGGCGTTCATG+GGG | + | chr1.3:32251993-32252012 | MS.gene84020:CDS | 60.0% | |
| TCGAAGGACCCGACCCGATT+CGG | - | chr1.3:32250342-32250361 | None:intergenic | 60.0% | |
| TGCCGGCGGTAGGTATGAGA+CGG | + | chr1.3:32250282-32250301 | MS.gene84020:CDS | 60.0% | |
| TGGCGCCTTTCTCGTCACAG+CGG | - | chr1.3:32250468-32250487 | None:intergenic | 60.0% | |
| ! | CCAACGTCTGCCAAGGGTAC+TGG | + | chr1.3:32251370-32251389 | MS.gene84020:CDS | 60.0% |
| !! | GACTGCTGGTGCTGCAAGCT+TGG | + | chr1.3:32250604-32250623 | MS.gene84020:CDS | 60.0% |
| ACCCCATGAACGCCTGGCAC+TGG | - | chr1.3:32251997-32252016 | None:intergenic | 65.0% | |
| CCGGCCACTCTTTGCAGCAC+AGG | - | chr1.3:32250693-32250712 | None:intergenic | 65.0% | |
| CCGGTGAAAAGGAGCCGGGT+CGG | + | chr1.3:32250530-32250549 | MS.gene84020:CDS | 65.0% | |
| GTAACCGGCGACCCGATCGA+AGG | - | chr1.3:32250358-32250377 | None:intergenic | 65.0% | |
| TCGGGTCGGGTCCTTCGATC+GGG | + | chr1.3:32250344-32250363 | MS.gene84020:CDS | 65.0% | |
| TGTCCACTCCGTCACCGACC+CGG | - | chr1.3:32250547-32250566 | None:intergenic | 65.0% | |
| TTAAGTGGCGGCGGCGGGAT+AGG | - | chr1.3:32250437-32250456 | None:intergenic | 65.0% | |
| ! | CCGACCCGGCTCCTTTTCAC+CGG | - | chr1.3:32250533-32250552 | None:intergenic | 65.0% |
| GGGTCCTTCGATCGGGTCGC+CGG | + | chr1.3:32250351-32250370 | MS.gene84020:CDS | 70.0% | |
| !! | GGGTCGGTGACGGAGTGGAC+AGG | + | chr1.3:32250546-32250565 | MS.gene84020:CDS | 70.0% |
| !! | GAGCCGGGTCGGTGACGGAG+TGG | + | chr1.3:32250541-32250560 | MS.gene84020:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 32250281 | 32254247 | 32250281 | ID=MS.gene84020 |
| chr1.3 | mRNA | 32250281 | 32254247 | 32250281 | ID=MS.gene84020.t1;Parent=MS.gene84020 |
| chr1.3 | exon | 32250281 | 32250832 | 32250281 | ID=MS.gene84020.t1.exon1;Parent=MS.gene84020.t1 |
| chr1.3 | CDS | 32250281 | 32250832 | 32250281 | ID=cds.MS.gene84020.t1;Parent=MS.gene84020.t1 |
| chr1.3 | exon | 32251046 | 32251135 | 32251046 | ID=MS.gene84020.t1.exon2;Parent=MS.gene84020.t1 |
| chr1.3 | CDS | 32251046 | 32251135 | 32251046 | ID=cds.MS.gene84020.t1;Parent=MS.gene84020.t1 |
| chr1.3 | exon | 32251205 | 32252386 | 32251205 | ID=MS.gene84020.t1.exon3;Parent=MS.gene84020.t1 |
| chr1.3 | CDS | 32251205 | 32252386 | 32251205 | ID=cds.MS.gene84020.t1;Parent=MS.gene84020.t1 |
| chr1.3 | exon | 32253290 | 32253404 | 32253290 | ID=MS.gene84020.t1.exon4;Parent=MS.gene84020.t1 |
| chr1.3 | CDS | 32253290 | 32253404 | 32253290 | ID=cds.MS.gene84020.t1;Parent=MS.gene84020.t1 |
| chr1.3 | exon | 32254003 | 32254247 | 32254003 | ID=MS.gene84020.t1.exon5;Parent=MS.gene84020.t1 |
| chr1.3 | CDS | 32254003 | 32254247 | 32254003 | ID=cds.MS.gene84020.t1;Parent=MS.gene84020.t1 |
| Gene Sequence |
| Protein sequence |
