AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058009


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058009.t1 MTR_4g098560 96.864 574 4 3 1 562 166 737 0.0 1120
MS.gene058009.t1 MTR_4g114950 71.892 370 25 4 4 363 1 301 7.42e-169 481
MS.gene058009.t1 MTR_2g020870 40.896 357 188 5 224 557 519 875 2.33e-71 245
MS.gene058009.t1 MTR_2g020870 48.066 181 81 2 224 394 519 696 3.84e-39 153
MS.gene058009.t1 MTR_1g089740 26.957 345 223 5 225 555 404 733 4.88e-30 125
MS.gene058009.t1 MTR_1g089740 26.957 345 223 5 225 555 429 758 5.77e-30 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058009.t1 AT2G35330 57.414 580 211 10 3 562 175 738 0.0 577
MS.gene058009.t1 AT2G35330 57.414 580 211 10 3 562 148 711 0.0 577
MS.gene058009.t1 AT1G32530 55.862 580 217 14 5 562 149 711 0.0 537
MS.gene058009.t1 AT4G03000 35.754 358 197 8 225 556 458 808 1.86e-55 200
MS.gene058009.t1 AT4G03000 35.754 358 197 8 225 556 458 808 1.86e-55 200
MS.gene058009.t1 AT1G03365 34.503 342 201 3 225 556 488 816 2.31e-49 183
MS.gene058009.t1 AT1G03365 34.503 342 201 3 225 556 488 816 2.31e-49 183
MS.gene058009.t1 AT4G03000 37.778 180 102 2 225 394 458 637 1.82e-27 117
MS.gene058009.t1 AT4G03000 37.778 180 102 2 225 394 458 637 1.99e-27 117
MS.gene058009.t1 AT4G03000 37.778 180 102 2 225 394 458 637 2.01e-27 117
MS.gene058009.t1 AT4G03000 37.778 180 102 2 225 394 458 637 2.01e-27 117

Find 158 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCCCTTTCTTCAATTTC+TGG 0.004804 8.1:-24277588 None:intergenic
TTGGATTCTCCGGTTGTATC+TGG 0.155255 8.1:+24277274 MS.gene058009:CDS
CGACTCTGATGCACTTAATT+TGG 0.180809 8.1:-24277755 None:intergenic
CTTGAATCTTGATGAAAATT+TGG 0.183926 8.1:+24277384 MS.gene058009:CDS
CAGATCGAACAGATGCTTTA+AGG 0.184682 8.1:-24279925 None:intergenic
TTTCATGAGGGGTGGGGATT+TGG 0.196073 8.1:+24277034 MS.gene058009:CDS
CAACAGAGAATCCGTGTATT+TGG 0.202063 8.1:+24280211 MS.gene058009:CDS
TGCTAAGCTGCTTCTGGATT+TGG 0.237221 8.1:+24280018 MS.gene058009:CDS
ATCCTTAATTACAGGCTAAA+TGG 0.256016 8.1:+24279726 MS.gene058009:intron
ATTTCATCAGATAAAGGATT+TGG 0.274722 8.1:+24277450 MS.gene058009:CDS
CCACCCCTCATGAAACTTAC+AGG 0.278418 8.1:-24277026 None:intergenic
GACAATTGCTAAGCTGCTTC+TGG 0.282396 8.1:+24280012 MS.gene058009:CDS
CTTTGATGGGTGAAGTATTT+TGG 0.282543 8.1:-24279961 None:intergenic
TCGTAGTGCTGTGTCGAATT+TGG 0.289373 8.1:+24277255 MS.gene058009:CDS
TTTCCCTTTCTTCAATTTCT+GGG 0.295767 8.1:-24277587 None:intergenic
AACAGAGAATCCGTGTATTT+GGG 0.305584 8.1:+24280212 MS.gene058009:CDS
AGGGGTGGGGATTTGGAAAT+GGG 0.324779 8.1:+24277041 MS.gene058009:CDS
CTCTTCAACAAGCACTTCAT+TGG 0.328174 8.1:-24277154 None:intergenic
GCATTTGGAGGAGTATTCTT+TGG 0.331101 8.1:+24276781 MS.gene058009:CDS
TTTCGCTGATTTGAAGCATT+TGG 0.335418 8.1:+24276766 MS.gene058009:CDS
TTAGCAATTGTCTCTCTTTG+AGG 0.339808 8.1:-24280001 None:intergenic
GGAGCTGCTGTTGTTGAATC+TGG 0.341405 8.1:+24276950 MS.gene058009:CDS
GAGGGGTGGGGATTTGGAAA+TGG 0.347011 8.1:+24277040 MS.gene058009:CDS
TGTACCCTCAAAGTCTTTGA+TGG 0.348726 8.1:-24279975 None:intergenic
GCATCACCTTTACTCAAATT+CGG 0.355254 8.1:-24276836 None:intergenic
TTGGAGGAGTATTCTTTGGC+TGG 0.358204 8.1:+24276785 MS.gene058009:CDS
CCCCTTCGCCTGCAATTGCT+TGG 0.358244 8.1:-24277215 None:intergenic
TGCTCGTGAGGGTGAGAATA+TGG 0.360974 8.1:+24276727 None:intergenic
GGCTTATCAGAAAGCATTGC+AGG 0.365464 8.1:+24277501 MS.gene058009:CDS
ATCTGATTCAGCTGCTTCCT+TGG 0.367941 8.1:-24279807 None:intergenic
GAGTATATTTCATCAGATAA+AGG 0.368409 8.1:+24277444 MS.gene058009:CDS
TTTGAAAGAGAAGATATTAG+AGG 0.370810 8.1:+24277878 MS.gene058009:CDS
CATCTCCGAGAGTCTCTTCA+TGG 0.375871 8.1:-24277629 None:intergenic
AGCCCATTCTTTCCGCTCCT+TGG 0.380485 8.1:-24277482 None:intergenic
TGGATTCTCCGGTTGTATCT+GGG 0.386567 8.1:+24277275 MS.gene058009:CDS
TCAATCTCCCTCTGCAAAAC+CGG 0.392850 8.1:-24277103 None:intergenic
GAAATTGAAGAAAGGGAAAC+AGG 0.404324 8.1:+24277591 MS.gene058009:CDS
GAGAAAGATCAAACCTCTTC+GGG 0.407254 8.1:-24277129 None:intergenic
AAGGGGAAGGCCAATGTTCT+TGG 0.414991 8.1:+24277232 MS.gene058009:CDS
TGATGAAAATTTGGAGTTTG+TGG 0.423422 8.1:+24277393 MS.gene058009:CDS
GATTACCCCACGAATGCAAA+TGG 0.426274 8.1:+24277064 MS.gene058009:CDS
CTTGAAGAAACTTCTAGCTT+GGG 0.427350 8.1:+24277818 MS.gene058009:intron
AGCAAACACCAAGCAATTGC+AGG 0.433045 8.1:+24277207 MS.gene058009:CDS
ACTTGAAGAAACTTCTAGCT+TGG 0.439554 8.1:+24277817 MS.gene058009:intron
CAATATCCCATTTGCATTCG+TGG 0.442568 8.1:-24277071 None:intergenic
CAGCTGAATCAGATAATAAG+AGG 0.444046 8.1:+24279816 MS.gene058009:CDS
GGAGAAAGATCAAACCTCTT+CGG 0.445672 8.1:-24277130 None:intergenic
GGAGTATTCTTTGGCTGGGA+TGG 0.447957 8.1:+24276790 MS.gene058009:CDS
CGCTGATTTGAAGCATTTGG+AGG 0.451062 8.1:+24276769 MS.gene058009:CDS
CAAATACACGGATTCTCTGT+TGG 0.455039 8.1:-24280210 None:intergenic
TTCACCCATCAAAGACTTTG+AGG 0.458864 8.1:+24279970 MS.gene058009:CDS
TGACTGAGCTCAAAACATTA+CGG 0.460683 8.1:+24277548 MS.gene058009:CDS
GTTGAATCTGGTGGTGGTGG+TGG 0.462730 8.1:+24276962 MS.gene058009:CDS
GTACTAAACCGGTTGCTCAT+AGG 0.464174 8.1:+24276993 MS.gene058009:CDS
TGCTTCAAATCAGCGAAAAC+CGG 0.464549 8.1:-24276761 None:intergenic
TGCATTTAGCACACATGACT+TGG 0.467599 8.1:-24280132 None:intergenic
GATGGTGTGTTTGTTGCAAC+AGG 0.467679 8.1:+24276808 MS.gene058009:CDS
ACTATAGAGATTCCTGTGCC+TGG 0.471233 8.1:+24276905 MS.gene058009:CDS
GGTCAAGTGGACCGTGCAAA+TGG 0.472634 8.1:+24277676 MS.gene058009:CDS
AGGCCAAGGAGCGGAAAGAA+TGG 0.476091 8.1:+24277479 MS.gene058009:CDS
CTCTGATGCACTTAATTTGG+AGG 0.476899 8.1:-24277752 None:intergenic
AGACCCAGAAATTGAAGAAA+GGG 0.477258 8.1:+24277584 MS.gene058009:CDS
TCACCCATCAAAGACTTTGA+GGG 0.477605 8.1:+24279971 MS.gene058009:CDS
TTCAACAAGCACTTCATTGG+CGG 0.480061 8.1:-24277151 None:intergenic
GGAGTGCGAGTGCGGGTGCG+AGG 0.480751 8.1:+24276927 MS.gene058009:CDS
GAGTGCGAGTGCGGGTGCGA+GGG 0.482418 8.1:+24276928 MS.gene058009:CDS
AATATCCCATTTGCATTCGT+GGG 0.483953 8.1:-24277070 None:intergenic
TGTGTTTGTTGCAACAGGTT+AGG 0.484982 8.1:+24276813 MS.gene058009:CDS
TGGGATATTGTCTTGTGCTC+CGG 0.488650 8.1:+24277084 MS.gene058009:CDS
TAAATGGAAGGAGGAGTTGA+AGG 0.491096 8.1:+24279742 MS.gene058009:CDS
TTGATACGTGTGGACACTCT+CGG 0.491280 8.1:+24277311 MS.gene058009:CDS
AATGTTGCCATGTTTGCTGC+TGG 0.494753 8.1:+24277178 MS.gene058009:CDS
GGAAAAGACCTATGAGCAAC+CGG 0.500424 8.1:-24277001 None:intergenic
GAATATGGATGAGCTTGAAC+CGG 0.501233 8.1:+24276742 MS.gene058009:CDS
ACAGAAAGCTAAGCTGCAAA+AGG 0.502215 8.1:+24277845 MS.gene058009:CDS
GAGACCCAGAAATTGAAGAA+AGG 0.503278 8.1:+24277583 MS.gene058009:CDS
TTAGATCATCCTTGTGGCGC+TGG 0.503533 8.1:-24279877 None:intergenic
TGGAGGAGTATTCTTTGGCT+GGG 0.506088 8.1:+24276786 MS.gene058009:CDS
GCACCGAGTTCACAGCCTCT+TGG 0.507080 8.1:-24277345 None:intergenic
GGCCAAGGAGCGGAAAGAAT+GGG 0.512400 8.1:+24277480 MS.gene058009:CDS
TGCTGAAATCAGAGCAGAGA+TGG 0.515753 8.1:+24277726 MS.gene058009:CDS
GTACCCTCAAAGTCTTTGAT+GGG 0.516395 8.1:-24279974 None:intergenic
CCACCCTGTAAGTTTCATGA+GGG 0.516547 8.1:+24277022 MS.gene058009:CDS
GTGCCTGGGAGTGCGAGTGC+GGG 0.517029 8.1:+24276920 MS.gene058009:CDS
TTCTCTGTTGGATTTGAACT+CGG 0.517905 8.1:-24280198 None:intergenic
ACCAAGCAATTGCAGGCGAA+GGG 0.521306 8.1:+24277214 MS.gene058009:CDS
CTGTAAGTTTCATGAGGGGT+GGG 0.524003 8.1:+24277027 MS.gene058009:CDS
TCCACCCTGTAAGTTTCATG+AGG 0.526508 8.1:+24277021 MS.gene058009:CDS
GGGGTGGGGATTTGGAAATG+GGG 0.527002 8.1:+24277042 MS.gene058009:CDS
GTTTCAGCCCCAGATACAAC+CGG 0.528436 8.1:-24277283 None:intergenic
AAATTTGGAGTTTGTGGCTG+AGG 0.529000 8.1:+24277399 MS.gene058009:CDS
TGGTAAGGCTCGTACTAAAC+CGG 0.530336 8.1:+24276982 MS.gene058009:CDS
TGTGTCGAATTTGGATTCTC+CGG 0.531438 8.1:+24277264 MS.gene058009:CDS
CATGAAGAGACTCTCGGAGA+TGG 0.532852 8.1:+24277630 MS.gene058009:CDS
TGATACGTGTGGACACTCTC+GGG 0.533853 8.1:+24277312 MS.gene058009:CDS
TTCTCACAGCTCCATTTGCA+CGG 0.534333 8.1:-24277687 None:intergenic
AGTGCGAGTGCGGGTGCGAG+GGG 0.535788 8.1:+24276929 MS.gene058009:CDS
CACCAAGCAATTGCAGGCGA+AGG 0.537169 8.1:+24277213 MS.gene058009:CDS
GCAATTGCAGGCGAAGGGGA+AGG 0.538678 8.1:+24277219 MS.gene058009:CDS
AGTGATGAGTACGGGAAGAA+TGG 0.541897 8.1:+24280154 MS.gene058009:CDS
GAAGGCTCAAGAAGATGCCT+TGG 0.547605 8.1:+24279760 MS.gene058009:CDS
GATGGAGAATGCTTTGAGAA+AGG 0.547829 8.1:+24277648 MS.gene058009:CDS
GCTGTTGTTGAATCTGGTGG+TGG 0.548584 8.1:+24276956 MS.gene058009:CDS
TGTGCCTGGGAGTGCGAGTG+CGG 0.548643 8.1:+24276919 MS.gene058009:CDS
GGATTCTCCGGTTGTATCTG+GGG 0.550596 8.1:+24277276 MS.gene058009:CDS
GTTAGGCCGAATTTGAGTAA+AGG 0.551522 8.1:+24276830 MS.gene058009:CDS
TGTAAGTTTCATGAGGGGTG+GGG 0.551649 8.1:+24277028 MS.gene058009:CDS
GTTGTTGAATCTGGTGGTGG+TGG 0.554384 8.1:+24276959 MS.gene058009:CDS
TAATGAGTGATCTTCATGTT+GGG 0.554772 8.1:+24276873 MS.gene058009:CDS
AGAATGCATTATATGTATGA+AGG 0.554862 8.1:+24280075 MS.gene058009:CDS
TGTATCTGGGGCTGAAACCA+CGG 0.555470 8.1:+24277288 MS.gene058009:CDS
ATTACCCCACGAATGCAAAT+GGG 0.556457 8.1:+24277065 MS.gene058009:CDS
TCTAAAACCAGCAGCAAACA+TGG 0.556498 8.1:-24277185 None:intergenic
CTATAGAGATTCCTGTGCCT+GGG 0.558646 8.1:+24276906 MS.gene058009:CDS
TGAAGAGGAGCGCCGTTCCA+AGG 0.558816 8.1:+24279790 MS.gene058009:CDS
CTAATGAGTGATCTTCATGT+TGG 0.560824 8.1:+24276872 MS.gene058009:CDS
CACATGACTTGGTGAGCACA+CGG 0.563461 8.1:-24280121 None:intergenic
CCTGTAAGTTTCATGAGGGG+TGG 0.564269 8.1:+24277026 MS.gene058009:CDS
TGCCTTGGCACTCGTTGAAG+AGG 0.564467 8.1:+24279775 MS.gene058009:CDS
CACCCTGTAAGTTTCATGAG+GGG 0.565523 8.1:+24277023 MS.gene058009:CDS
CTCCTCTTCAACGAGTGCCA+AGG 0.565852 8.1:-24279777 None:intergenic
GCACTCGCACTCCCAGGCAC+AGG 0.573638 8.1:-24276917 None:intergenic
TAACCAAGAGGCTGTGAACT+CGG 0.574321 8.1:+24277342 MS.gene058009:CDS
ATTCAGCTGCTTCCTTGGAA+CGG 0.574952 8.1:-24279802 None:intergenic
TTAATTACAGGCTAAATGGA+AGG 0.576922 8.1:+24279730 MS.gene058009:intron
GCTAAATGCAGTGATGAGTA+CGG 0.582217 8.1:+24280145 MS.gene058009:CDS
GCTGCTGTTGTTGAATCTGG+TGG 0.582460 8.1:+24276953 MS.gene058009:CDS
GAGAAAGGCTAGTGGTCAAG+TGG 0.583903 8.1:+24277663 MS.gene058009:CDS
CACCCCTCATGAAACTTACA+GGG 0.584927 8.1:-24277025 None:intergenic
GCACCCGCACTCGCACTCCC+AGG 0.592742 8.1:-24276923 None:intergenic
AGCTGAATCAGATAATAAGA+GGG 0.599087 8.1:+24279817 MS.gene058009:CDS
TGAGCTCAAAACATTACGGA+TGG 0.602903 8.1:+24277552 MS.gene058009:CDS
GAAAGGGAAACAGGCACTTG+AGG 0.609973 8.1:+24277600 MS.gene058009:CDS
CTAAATGCAGTGATGAGTAC+GGG 0.613638 8.1:+24280146 MS.gene058009:CDS
CAAATTAAGTGCATCAGAGT+CGG 0.614461 8.1:+24277756 MS.gene058009:CDS
CCAAGCAATTGCAGGCGAAG+GGG 0.618090 8.1:+24277215 MS.gene058009:CDS
TGAGTACGGGAAGAATGGTA+AGG 0.622531 8.1:+24280159 MS.gene058009:CDS
ACGAGCATGCCCCAAATACA+CGG 0.623089 8.1:-24280222 None:intergenic
CACAACCATGAAGAGACTCT+CGG 0.624070 8.1:+24277624 MS.gene058009:CDS
ACAGAGAATCCGTGTATTTG+GGG 0.627894 8.1:+24280213 MS.gene058009:CDS
TGGATTTGAACTCGGCAGCA+AGG 0.632471 8.1:-24280190 None:intergenic
TGAAATCAGAGCAGAGATGG+AGG 0.635617 8.1:+24277729 MS.gene058009:CDS
GTCTGCTTAGATCATCCTTG+TGG 0.636940 8.1:-24279883 None:intergenic
ATTAGATTTCCAGCGCCACA+AGG 0.640698 8.1:+24279868 MS.gene058009:CDS
GTTTGTGGCTGAGGATCAGA+AGG 0.647016 8.1:+24277408 MS.gene058009:CDS
AGCACTACGACCAAGAACAT+TGG 0.647666 8.1:-24277242 None:intergenic
ATATCCCATTTGCATTCGTG+GGG 0.649876 8.1:-24277069 None:intergenic
ATTACAGGCTAAATGGAAGG+AGG 0.652771 8.1:+24279733 MS.gene058009:intron
GAAACCACGGTTGATACGTG+TGG 0.654330 8.1:+24277301 MS.gene058009:CDS
GGGAGATTGAATTCCCGAAG+AGG 0.662042 8.1:+24277116 MS.gene058009:CDS
CCCTCATGAAACTTACAGGG+TGG 0.674174 8.1:-24277022 None:intergenic
AGCACACGGCAAGAAAACAA+CGG 0.693474 8.1:-24280107 None:intergenic
GCTGAATCAGATAATAAGAG+GGG 0.694209 8.1:+24279818 MS.gene058009:CDS
CTGAATCAGATAATAAGAGG+GGG 0.702623 8.1:+24279819 MS.gene058009:CDS
TCGGGTTGTTGATAACCAAG+AGG 0.705979 8.1:+24277330 MS.gene058009:CDS
TGAGTAAAGGTGATGCAATG+TGG 0.707299 8.1:+24276843 MS.gene058009:CDS
AATGCTTTGAGAAAGGCTAG+TGG 0.716247 8.1:+24277655 MS.gene058009:CDS
GTGTCCACACGTATCAACCG+TGG 0.738404 8.1:-24277305 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAATAAAATAATAA+GGG - chr8.1:24277964-24277983 None:intergenic 0.0%
!! TATATATAAATAAAATAATA+AGG - chr8.1:24277965-24277984 None:intergenic 0.0%
!! AGAATATCAAAATATTTAGA+AGG - chr8.1:24279258-24279277 None:intergenic 15.0%
!! ATTTGTAATATACACATAAT+TGG + chr8.1:24278804-24278823 MS.gene058009:intron 15.0%
!! GAATATCAAAATATTTAGAA+GGG - chr8.1:24279257-24279276 None:intergenic 15.0%
!!! AGGTATTTTCTTATTAATAA+AGG + chr8.1:24279398-24279417 MS.gene058009:intron 15.0%
!!! CAAATTATTGTTTTTCTTTT+TGG - chr8.1:24279679-24279698 None:intergenic 15.0%
!! ATACCTATAGAATATAAGTT+AGG - chr8.1:24279384-24279403 None:intergenic 20.0%
!! ATTTATTAATCAGTACCATT+AGG - chr8.1:24279457-24279476 None:intergenic 20.0%
!! ATTTGAAAGATACGTATTAT+TGG - chr8.1:24279627-24279646 None:intergenic 20.0%
!! TAAGGATTATGCAAAATAAA+TGG - chr8.1:24279713-24279732 None:intergenic 20.0%
!! TAATTGGTATTTGATACTAA+AGG + chr8.1:24278820-24278839 MS.gene058009:intron 20.0%
!! TGTTAGATACAAAAACAAAT+AGG - chr8.1:24278972-24278991 None:intergenic 20.0%
!! TTTATTAATCAGTACCATTA+GGG - chr8.1:24279456-24279475 None:intergenic 20.0%
!!! ATATCACTTTTTAGTGTATT+TGG + chr8.1:24279283-24279302 MS.gene058009:intron 20.0%
!!! CACATGACTTATTTTTAAAA+TGG + chr8.1:24279151-24279170 MS.gene058009:intron 20.0%
!!! TATTTGTTTTTGTATCTAAC+AGG + chr8.1:24278971-24278990 MS.gene058009:intron 20.0%
!!! TGAAACAAGTAATTTTCTTT+GGG - chr8.1:24278252-24278271 None:intergenic 20.0%
!!! TTGAAACAAGTAATTTTCTT+TGG - chr8.1:24278253-24278272 None:intergenic 20.0%
! AGAATGCATTATATGTATGA+AGG + chr8.1:24280075-24280094 MS.gene058009:CDS 25.0%
! ATTTCATCAGATAAAGGATT+TGG + chr8.1:24277450-24277469 MS.gene058009:CDS 25.0%
! CATAGAATGAGTTTATTGAT+CGG + chr8.1:24278049-24278068 MS.gene058009:intron 25.0%
! CATTGAATGCATATCTAATT+GGG + chr8.1:24278363-24278382 MS.gene058009:intron 25.0%
! CTTGAATCTTGATGAAAATT+TGG + chr8.1:24277384-24277403 MS.gene058009:CDS 25.0%
! GAGTATATTTCATCAGATAA+AGG + chr8.1:24277444-24277463 MS.gene058009:CDS 25.0%
! GATCCTAACTTATATTCTAT+AGG + chr8.1:24279378-24279397 MS.gene058009:intron 25.0%
! TATCAAAATATTTAGAAGGG+AGG - chr8.1:24279254-24279273 None:intergenic 25.0%
! TCATTGAATGCATATCTAAT+TGG + chr8.1:24278362-24278381 MS.gene058009:intron 25.0%
! TGAACTTTACATGTAGTTTA+CGG + chr8.1:24278157-24278176 MS.gene058009:intron 25.0%
! TTTGAAAGAGAAGATATTAG+AGG + chr8.1:24277878-24277897 MS.gene058009:CDS 25.0%
! TTTGCATAATCCTTAATTAC+AGG + chr8.1:24279718-24279737 MS.gene058009:intron 25.0%
!! AACTCAAGTATTTAAAGTTC+AGG - chr8.1:24279223-24279242 None:intergenic 25.0%
!! AATTGATCGTTTTGTCATAA+AGG + chr8.1:24278330-24278349 MS.gene058009:intron 25.0%
!! ATATTCATGGGTGTTTATTT+TGG + chr8.1:24279313-24279332 MS.gene058009:intron 25.0%
!! ATTGATCGTTTTGTCATAAA+GGG + chr8.1:24278331-24278350 MS.gene058009:intron 25.0%
!! TGATATTTTCTGTTCCTTTT+TGG - chr8.1:24278015-24278034 None:intergenic 25.0%
!!! AGCAAACAAGTTTTTTCATA+TGG - chr8.1:24279342-24279361 None:intergenic 25.0%
!!! AGTATTGACAAACAAAGATA+CGG - chr8.1:24278640-24278659 None:intergenic 25.0%
AAAATGAGTCACACAGATTA+TGG - chr8.1:24278116-24278135 None:intergenic 30.0%
AAATTACCAGTATGCATCAA+AGG - chr8.1:24278477-24278496 None:intergenic 30.0%
ACATGTAAAGTTCAACCAAA+TGG - chr8.1:24278151-24278170 None:intergenic 30.0%
AGCTGAATCAGATAATAAGA+GGG + chr8.1:24279817-24279836 MS.gene058009:CDS 30.0%
ATCATTGCTAACAAAATCAC+AGG - chr8.1:24279592-24279611 None:intergenic 30.0%
ATCCTTAATTACAGGCTAAA+TGG + chr8.1:24279726-24279745 MS.gene058009:intron 30.0%
ATTCACATTGCATCTATCTT+TGG - chr8.1:24278775-24278794 None:intergenic 30.0%
CAGTCAACAAAAGAAAATTC+AGG - chr8.1:24279563-24279582 None:intergenic 30.0%
GATAAAGGATTTGGAAAAAC+AGG + chr8.1:24277459-24277478 MS.gene058009:CDS 30.0%
GCACACTAATTCAAATTCTA+TGG + chr8.1:24278593-24278612 MS.gene058009:intron 30.0%
TAATGAGTGATCTTCATGTT+GGG + chr8.1:24276873-24276892 MS.gene058009:CDS 30.0%
TCCATGCAATTGTAATCTTA+TGG + chr8.1:24278946-24278965 MS.gene058009:intron 30.0%
TTAATTACAGGCTAAATGGA+AGG + chr8.1:24279730-24279749 MS.gene058009:intron 30.0%
TTCAAAATCAGACATCAACA+TGG + chr8.1:24278268-24278287 MS.gene058009:intron 30.0%
TTCCATTTAGCCTGTAATTA+AGG - chr8.1:24279731-24279750 None:intergenic 30.0%
TTTCCCTTTCTTCAATTTCT+GGG - chr8.1:24277590-24277609 None:intergenic 30.0%
TTTGCACATTGAATTCCATT+TGG + chr8.1:24278133-24278152 MS.gene058009:intron 30.0%
! ATACGTATTATTGGTTGAAG+TGG - chr8.1:24279618-24279637 None:intergenic 30.0%
! TATTTAAAGTTCAGGTCCTA+CGG - chr8.1:24279215-24279234 None:intergenic 30.0%
! TATTTTCTGTTCCTTTTTGG+TGG - chr8.1:24278012-24278031 None:intergenic 30.0%
! TGATGAAAATTTGGAGTTTG+TGG + chr8.1:24277393-24277412 MS.gene058009:CDS 30.0%
! TTAGCAGCTGTATCATATTT+TGG - chr8.1:24278728-24278747 None:intergenic 30.0%
! TTTTTGTATCTAACAGGTAG+AGG + chr8.1:24278977-24278996 MS.gene058009:intron 30.0%
AAACTGTGTCACACTAGTAT+AGG - chr8.1:24278294-24278313 None:intergenic 35.0%
AACAGAGAATCCGTGTATTT+GGG + chr8.1:24280212-24280231 MS.gene058009:CDS 35.0%
AACTGAGCCATTGTTTCATA+CGG + chr8.1:24278531-24278550 MS.gene058009:intron 35.0%
AAGGCACGAAAAAGAAGAAA+AGG - chr8.1:24278458-24278477 None:intergenic 35.0%
AATATCCCATTTGCATTCGT+GGG - chr8.1:24277073-24277092 None:intergenic 35.0%
AGACCCAGAAATTGAAGAAA+GGG + chr8.1:24277584-24277603 MS.gene058009:CDS 35.0%
AGATTACAATTGCATGGAAG+AGG - chr8.1:24278944-24278963 None:intergenic 35.0%
ATTTCCCTTATAGGGAAACT+AGG - chr8.1:24279112-24279131 None:intergenic 35.0%
ATTTGGTTGCTGCATATTCA+TGG + chr8.1:24279300-24279319 MS.gene058009:intron 35.0%
CAAATTAAGTGCATCAGAGT+CGG + chr8.1:24277756-24277775 MS.gene058009:CDS 35.0%
CAGCTGAATCAGATAATAAG+AGG + chr8.1:24279816-24279835 MS.gene058009:CDS 35.0%
CTAATGAGTGATCTTCATGT+TGG + chr8.1:24276872-24276891 MS.gene058009:CDS 35.0%
CTCAAGTACTTCTTGATTCT+CGG + chr8.1:24278891-24278910 MS.gene058009:intron 35.0%
CTGAATCAGATAATAAGAGG+GGG + chr8.1:24279819-24279838 MS.gene058009:CDS 35.0%
GAAATTGAAGAAAGGGAAAC+AGG + chr8.1:24277591-24277610 MS.gene058009:CDS 35.0%
GCATCACCTTTACTCAAATT+CGG - chr8.1:24276839-24276858 None:intergenic 35.0%
GCCATAAGATTACAATTGCA+TGG - chr8.1:24278950-24278969 None:intergenic 35.0%
GCTGAATCAGATAATAAGAG+GGG + chr8.1:24279818-24279837 MS.gene058009:CDS 35.0%
GTTTCCCTTTCTTCAATTTC+TGG - chr8.1:24277591-24277610 None:intergenic 35.0%
TGAAGTTTGTGTCAAGACAT+GGG + chr8.1:24278562-24278581 MS.gene058009:intron 35.0%
TGACTGAGCTCAAAACATTA+CGG + chr8.1:24277548-24277567 MS.gene058009:CDS 35.0%
TTAGCAATTGTCTCTCTTTG+AGG - chr8.1:24280004-24280023 None:intergenic 35.0%
TTATGTGCCGTATGAAACAA+TGG - chr8.1:24278541-24278560 None:intergenic 35.0%
TTCTCTGTTGGATTTGAACT+CGG - chr8.1:24280201-24280220 None:intergenic 35.0%
TTGAAGTTTGTGTCAAGACA+TGG + chr8.1:24278561-24278580 MS.gene058009:intron 35.0%
TTTCCCTATAAGGGAAATAG+CGG + chr8.1:24279114-24279133 MS.gene058009:intron 35.0%
TTTGGTTGCTGCATATTCAT+GGG + chr8.1:24279301-24279320 MS.gene058009:intron 35.0%
! ACTTGAAGAAACTTCTAGCT+TGG + chr8.1:24277817-24277836 MS.gene058009:intron 35.0%
! TGCATCTATCTTTGGTGTAA+TGG - chr8.1:24278767-24278786 None:intergenic 35.0%
!! CTTGAAGAAACTTCTAGCTT+GGG + chr8.1:24277818-24277837 MS.gene058009:intron 35.0%
!! CTTTGATGGGTGAAGTATTT+TGG - chr8.1:24279964-24279983 None:intergenic 35.0%
!! TTTCGCTGATTTGAAGCATT+TGG + chr8.1:24276766-24276785 MS.gene058009:CDS 35.0%
AAGTTTGTGTCAAGACATGG+GGG + chr8.1:24278564-24278583 MS.gene058009:intron 40.0%
ACAAGTAGGAGTTTAAGTCC+TGG + chr8.1:24278186-24278205 MS.gene058009:intron 40.0%
ACAGAAAGCTAAGCTGCAAA+AGG + chr8.1:24277845-24277864 MS.gene058009:CDS 40.0%
ACAGAGAATCCGTGTATTTG+GGG + chr8.1:24280213-24280232 MS.gene058009:CDS 40.0%
ACTAATCCCTGTTTGGGAAT+TGG - chr8.1:24278218-24278237 None:intergenic 40.0%
ACTGTCCTAGTTTCCCTATA+AGG + chr8.1:24279104-24279123 MS.gene058009:intron 40.0%
AGATAATAAGAGGGGGTTTG+AGG + chr8.1:24279826-24279845 MS.gene058009:CDS 40.0%
AGTGCTAATCAATGCCCTAA+TGG + chr8.1:24279439-24279458 MS.gene058009:intron 40.0%
ATATCCCATTTGCATTCGTG+GGG - chr8.1:24277072-24277091 None:intergenic 40.0%
ATTACAGGCTAAATGGAAGG+AGG + chr8.1:24279733-24279752 MS.gene058009:intron 40.0%
ATTACCCCACGAATGCAAAT+GGG + chr8.1:24277065-24277084 MS.gene058009:CDS 40.0%
ATTGCTACTATGTTCACCGT+AGG + chr8.1:24279196-24279215 MS.gene058009:intron 40.0%
CAAATACACGGATTCTCTGT+TGG - chr8.1:24280213-24280232 None:intergenic 40.0%
CAACAGAGAATCCGTGTATT+TGG + chr8.1:24280211-24280230 MS.gene058009:CDS 40.0%
CAAGTAGGAGTTTAAGTCCT+GGG + chr8.1:24278187-24278206 MS.gene058009:intron 40.0%
CAATATCCCATTTGCATTCG+TGG - chr8.1:24277074-24277093 None:intergenic 40.0%
CAGATCGAACAGATGCTTTA+AGG - chr8.1:24279928-24279947 None:intergenic 40.0%
CATTCTGCCATGAACTATTC+TGG - chr8.1:24278687-24278706 None:intergenic 40.0%
CGACTCTGATGCACTTAATT+TGG - chr8.1:24277758-24277777 None:intergenic 40.0%
CTAAATGCAGTGATGAGTAC+GGG + chr8.1:24280146-24280165 MS.gene058009:CDS 40.0%
CTCTTCAACAAGCACTTCAT+TGG - chr8.1:24277157-24277176 None:intergenic 40.0%
CTGTCCTAGTTTCCCTATAA+GGG + chr8.1:24279105-24279124 MS.gene058009:intron 40.0%
GAAGTTTGTGTCAAGACATG+GGG + chr8.1:24278563-24278582 MS.gene058009:intron 40.0%
GAATAGTTCATGGCAGAATG+TGG + chr8.1:24278687-24278706 MS.gene058009:intron 40.0%
GAATATGGATGAGCTTGAAC+CGG + chr8.1:24276742-24276761 MS.gene058009:CDS 40.0%
GAGAAAGATCAAACCTCTTC+GGG - chr8.1:24277132-24277151 None:intergenic 40.0%
GAGACCCAGAAATTGAAGAA+AGG + chr8.1:24277583-24277602 MS.gene058009:CDS 40.0%
GCTAAATGCAGTGATGAGTA+CGG + chr8.1:24280145-24280164 MS.gene058009:CDS 40.0%
GGAGAAAGATCAAACCTCTT+CGG - chr8.1:24277133-24277152 None:intergenic 40.0%
GTACCCTCAAAGTCTTTGAT+GGG - chr8.1:24279977-24279996 None:intergenic 40.0%
GTTAGGCCGAATTTGAGTAA+AGG + chr8.1:24276830-24276849 MS.gene058009:CDS 40.0%
GTTTACGGCTTGAAACAAGT+AGG + chr8.1:24278172-24278191 MS.gene058009:intron 40.0%
TAAATGGAAGGAGGAGTTGA+AGG + chr8.1:24279742-24279761 MS.gene058009:CDS 40.0%
TCACCCATCAAAGACTTTGA+GGG + chr8.1:24279971-24279990 MS.gene058009:CDS 40.0%
TGAACCATGTATGCATAGCT+TGG + chr8.1:24278502-24278521 MS.gene058009:intron 40.0%
TGAGCTCAAAACATTACGGA+TGG + chr8.1:24277552-24277571 MS.gene058009:CDS 40.0%
TGAGTAAAGGTGATGCAATG+TGG + chr8.1:24276843-24276862 MS.gene058009:CDS 40.0%
TGCATTTAGCACACATGACT+TGG - chr8.1:24280135-24280154 None:intergenic 40.0%
TGCTTCAAATCAGCGAAAAC+CGG - chr8.1:24276764-24276783 None:intergenic 40.0%
TGTACCCTCAAAGTCTTTGA+TGG - chr8.1:24279978-24279997 None:intergenic 40.0%
TGTGTCGAATTTGGATTCTC+CGG + chr8.1:24277264-24277283 MS.gene058009:CDS 40.0%
TTCAACAAGCACTTCATTGG+CGG - chr8.1:24277154-24277173 None:intergenic 40.0%
TTCACCCATCAAAGACTTTG+AGG + chr8.1:24279970-24279989 MS.gene058009:CDS 40.0%
! AAATTTGGAGTTTGTGGCTG+AGG + chr8.1:24277399-24277418 MS.gene058009:CDS 40.0%
! ATTTTCTTTGGGTGAGACTG+TGG - chr8.1:24278241-24278260 None:intergenic 40.0%
! CTCTGATGCACTTAATTTGG+AGG - chr8.1:24277755-24277774 None:intergenic 40.0%
! TCTAAAACCAGCAGCAAACA+TGG - chr8.1:24277188-24277207 None:intergenic 40.0%
! TGTGTTTGTTGCAACAGGTT+AGG + chr8.1:24276813-24276832 MS.gene058009:CDS 40.0%
!! AATGCTTTGAGAAAGGCTAG+TGG + chr8.1:24277655-24277674 MS.gene058009:CDS 40.0%
!! GATGGAGAATGCTTTGAGAA+AGG + chr8.1:24277648-24277667 MS.gene058009:CDS 40.0%
!! GCATTTGGAGGAGTATTCTT+TGG + chr8.1:24276781-24276800 MS.gene058009:CDS 40.0%
AATTCTTTAGCCAATGCCCC+TGG + chr8.1:24279504-24279523 MS.gene058009:intron 45.0%
ACTATAGAGATTCCTGTGCC+TGG + chr8.1:24276905-24276924 MS.gene058009:CDS 45.0%
AGCAAACACCAAGCAATTGC+AGG + chr8.1:24277207-24277226 MS.gene058009:CDS 45.0%
AGCACACGGCAAGAAAACAA+CGG - chr8.1:24280110-24280129 None:intergenic 45.0%
AGCACTACGACCAAGAACAT+TGG - chr8.1:24277245-24277264 None:intergenic 45.0%
AGTCATGTGTAGCACACATG+CGG - chr8.1:24279140-24279159 None:intergenic 45.0%
AGTGATGAGTACGGGAAGAA+TGG + chr8.1:24280154-24280173 MS.gene058009:CDS 45.0%
ATCTGATTCAGCTGCTTCCT+TGG - chr8.1:24279810-24279829 None:intergenic 45.0%
ATTAGATTTCCAGCGCCACA+AGG + chr8.1:24279868-24279887 MS.gene058009:CDS 45.0%
ATTCAGCTGCTTCCTTGGAA+CGG - chr8.1:24279805-24279824 None:intergenic 45.0%
ATTCTTTAGCCAATGCCCCT+GGG + chr8.1:24279505-24279524 MS.gene058009:intron 45.0%
CACAACCATGAAGAGACTCT+CGG + chr8.1:24277624-24277643 MS.gene058009:CDS 45.0%
CACCCCTCATGAAACTTACA+GGG - chr8.1:24277028-24277047 None:intergenic 45.0%
CACCCTGTAAGTTTCATGAG+GGG + chr8.1:24277023-24277042 MS.gene058009:CDS 45.0%
CCACACACAAACCACCAAAA+AGG + chr8.1:24277998-24278017 MS.gene058009:intron 45.0%
CCACCCTGTAAGTTTCATGA+GGG + chr8.1:24277022-24277041 MS.gene058009:CDS 45.0%
CTATAGAGATTCCTGTGCCT+GGG + chr8.1:24276906-24276925 MS.gene058009:CDS 45.0%
CTGTAAGTTTCATGAGGGGT+GGG + chr8.1:24277027-24277046 MS.gene058009:CDS 45.0%
CTTGATTCTCGGCTTCTTCT+TGG + chr8.1:24278902-24278921 MS.gene058009:intron 45.0%
GACAATTGCTAAGCTGCTTC+TGG + chr8.1:24280012-24280031 MS.gene058009:CDS 45.0%
GATTACCCCACGAATGCAAA+TGG + chr8.1:24277064-24277083 MS.gene058009:CDS 45.0%
GCACACACCAGAATAGTTCA+TGG + chr8.1:24278677-24278696 MS.gene058009:intron 45.0%
GGAAAAGACCTATGAGCAAC+CGG - chr8.1:24277004-24277023 None:intergenic 45.0%
GGATTTGGAAAAACAGGCCA+AGG + chr8.1:24277465-24277484 MS.gene058009:CDS 45.0%
GTACTAAACCGGTTGCTCAT+AGG + chr8.1:24276993-24277012 MS.gene058009:CDS 45.0%
GTCTCCAAGCTATGCATACA+TGG - chr8.1:24278509-24278528 None:intergenic 45.0%
GTCTGCTTAGATCATCCTTG+TGG - chr8.1:24279886-24279905 None:intergenic 45.0%
GTGTCTTGACTCTTGAGTAC+TGG - chr8.1:24278849-24278868 None:intergenic 45.0%
TAACCAAGAGGCTGTGAACT+CGG + chr8.1:24277342-24277361 MS.gene058009:CDS 45.0%
TCAATCTCCCTCTGCAAAAC+CGG - chr8.1:24277106-24277125 None:intergenic 45.0%
TCCACCCTGTAAGTTTCATG+AGG + chr8.1:24277021-24277040 MS.gene058009:CDS 45.0%
TCGTAGTGCTGTGTCGAATT+TGG + chr8.1:24277255-24277274 MS.gene058009:CDS 45.0%
TGAAATCAGAGCAGAGATGG+AGG + chr8.1:24277729-24277748 MS.gene058009:CDS 45.0%
TGAGTACGGGAAGAATGGTA+AGG + chr8.1:24280159-24280178 MS.gene058009:CDS 45.0%
TGCTAAGCTGCTTCTGGATT+TGG + chr8.1:24280018-24280037 MS.gene058009:CDS 45.0%
TGCTGAAATCAGAGCAGAGA+TGG + chr8.1:24277726-24277745 MS.gene058009:CDS 45.0%
TGGATTCTCCGGTTGTATCT+GGG + chr8.1:24277275-24277294 MS.gene058009:CDS 45.0%
TGGGATATTGTCTTGTGCTC+CGG + chr8.1:24277084-24277103 MS.gene058009:CDS 45.0%
TGGTAAGGCTCGTACTAAAC+CGG + chr8.1:24276982-24277001 MS.gene058009:CDS 45.0%
TGTAAGTTTCATGAGGGGTG+GGG + chr8.1:24277028-24277047 MS.gene058009:CDS 45.0%
TTCGTGCCTTTGATGCATAC+TGG + chr8.1:24278468-24278487 MS.gene058009:intron 45.0%
TTCTCACAGCTCCATTTGCA+CGG - chr8.1:24277690-24277709 None:intergenic 45.0%
TTGATACGTGTGGACACTCT+CGG + chr8.1:24277311-24277330 MS.gene058009:CDS 45.0%
TTGGATTCTCCGGTTGTATC+TGG + chr8.1:24277274-24277293 MS.gene058009:CDS 45.0%
! AATGTTGCCATGTTTGCTGC+TGG + chr8.1:24277178-24277197 MS.gene058009:CDS 45.0%
! ACTGTGGACTAATCCCTGTT+TGG - chr8.1:24278225-24278244 None:intergenic 45.0%
! AGAGAACCTCGGCTTCTTTT+TGG - chr8.1:24277935-24277954 None:intergenic 45.0%
! CTGTGGACTAATCCCTGTTT+GGG - chr8.1:24278224-24278243 None:intergenic 45.0%
! GATGGTGTGTTTGTTGCAAC+AGG + chr8.1:24276808-24276827 MS.gene058009:CDS 45.0%
! TGTCAAGACATGGGGGTATA+CGG + chr8.1:24278571-24278590 MS.gene058009:intron 45.0%
!! CCTTTTTGGTGGTTTGTGTG+TGG - chr8.1:24278001-24278020 None:intergenic 45.0%
!! CGCTGATTTGAAGCATTTGG+AGG + chr8.1:24276769-24276788 MS.gene058009:CDS 45.0%
!! GGCTTATCAGAAAGCATTGC+AGG + chr8.1:24277501-24277520 MS.gene058009:CDS 45.0%
!! TCGGGTTGTTGATAACCAAG+AGG + chr8.1:24277330-24277349 MS.gene058009:CDS 45.0%
!! TGGAGGAGTATTCTTTGGCT+GGG + chr8.1:24276786-24276805 MS.gene058009:CDS 45.0%
!! TTGGAGGAGTATTCTTTGGC+TGG + chr8.1:24276785-24276804 MS.gene058009:CDS 45.0%
!! TATATAAATAAAATAATAAG+GGG - chr8.1:24277963-24277982 None:intergenic 5.0%
AAGGGGAAGGCCAATGTTCT+TGG + chr8.1:24277232-24277251 MS.gene058009:CDS 50.0%
ACCAAGCAATTGCAGGCGAA+GGG + chr8.1:24277214-24277233 MS.gene058009:CDS 50.0%
ACGAGCATGCCCCAAATACA+CGG - chr8.1:24280225-24280244 None:intergenic 50.0%
AGGGGTGGGGATTTGGAAAT+GGG + chr8.1:24277041-24277060 MS.gene058009:CDS 50.0%
AGTCATGCTAACCAATGCCC+AGG - chr8.1:24279525-24279544 None:intergenic 50.0%
CATCTCCGAGAGTCTCTTCA+TGG - chr8.1:24277632-24277651 None:intergenic 50.0%
CATGAAGAGACTCTCGGAGA+TGG + chr8.1:24277630-24277649 MS.gene058009:CDS 50.0%
CCACCCCTCATGAAACTTAC+AGG - chr8.1:24277029-24277048 None:intergenic 50.0%
CCCTCATGAAACTTACAGGG+TGG - chr8.1:24277025-24277044 None:intergenic 50.0%
CCTGTAAGTTTCATGAGGGG+TGG + chr8.1:24277026-24277045 MS.gene058009:CDS 50.0%
GAAAGGGAAACAGGCACTTG+AGG + chr8.1:24277600-24277619 MS.gene058009:CDS 50.0%
GAAGGCTCAAGAAGATGCCT+TGG + chr8.1:24279760-24279779 MS.gene058009:CDS 50.0%
GAGAAAGGCTAGTGGTCAAG+TGG + chr8.1:24277663-24277682 MS.gene058009:CDS 50.0%
GCCAAGCCAATTCCCAAACA+GGG + chr8.1:24278209-24278228 MS.gene058009:intron 50.0%
GCTGCTGTTGTTGAATCTGG+TGG + chr8.1:24276953-24276972 MS.gene058009:CDS 50.0%
GCTGTTGTTGAATCTGGTGG+TGG + chr8.1:24276956-24276975 MS.gene058009:CDS 50.0%
GGAGCTGCTGTTGTTGAATC+TGG + chr8.1:24276950-24276969 MS.gene058009:CDS 50.0%
GGATTCTCCGGTTGTATCTG+GGG + chr8.1:24277276-24277295 MS.gene058009:CDS 50.0%
GGGAGATTGAATTCCCGAAG+AGG + chr8.1:24277116-24277135 MS.gene058009:CDS 50.0%
GTCATGCTAACCAATGCCCA+GGG - chr8.1:24279524-24279543 None:intergenic 50.0%
GTTTCAGCCCCAGATACAAC+CGG - chr8.1:24277286-24277305 None:intergenic 50.0%
GTTTGTGGCTGAGGATCAGA+AGG + chr8.1:24277408-24277427 MS.gene058009:CDS 50.0%
TCATGCTAACCAATGCCCAG+GGG - chr8.1:24279523-24279542 None:intergenic 50.0%
TCCCTGTTTGGGAATTGGCT+TGG - chr8.1:24278213-24278232 None:intergenic 50.0%
TGATACGTGTGGACACTCTC+GGG + chr8.1:24277312-24277331 MS.gene058009:CDS 50.0%
TGGAAAAACAGGCCAAGGAG+CGG + chr8.1:24277470-24277489 MS.gene058009:CDS 50.0%
TGGATTTGAACTCGGCAGCA+AGG - chr8.1:24280193-24280212 None:intergenic 50.0%
TTAGATCATCCTTGTGGCGC+TGG - chr8.1:24279880-24279899 None:intergenic 50.0%
TTTCATGAGGGGTGGGGATT+TGG + chr8.1:24277034-24277053 MS.gene058009:CDS 50.0%
! CGGCCGCTATTTCCCTTATA+GGG - chr8.1:24279120-24279139 None:intergenic 50.0%
! GAAACCACGGTTGATACGTG+TGG + chr8.1:24277301-24277320 MS.gene058009:CDS 50.0%
! GGAGTATTCTTTGGCTGGGA+TGG + chr8.1:24276790-24276809 MS.gene058009:CDS 50.0%
! GTATTTGGGGCATGCTCGTA+GGG + chr8.1:24280226-24280245 MS.gene058009:CDS 50.0%
! TGTATCTGGGGCTGAAACCA+CGG + chr8.1:24277288-24277307 MS.gene058009:CDS 50.0%
! TGTATTTGGGGCATGCTCGT+AGG + chr8.1:24280225-24280244 MS.gene058009:CDS 50.0%
! TTGTGCTCCGGTTTTGCAGA+GGG + chr8.1:24277096-24277115 MS.gene058009:CDS 50.0%
!! CACATGACTTGGTGAGCACA+CGG - chr8.1:24280124-24280143 None:intergenic 50.0%
!! GTTGTTGAATCTGGTGGTGG+TGG + chr8.1:24276959-24276978 MS.gene058009:CDS 50.0%
AAGGGGCGAAGAGAGAACCT+CGG - chr8.1:24277946-24277965 None:intergenic 55.0%
AGCCCATTCTTTCCGCTCCT+TGG - chr8.1:24277485-24277504 None:intergenic 55.0%
AGGCCAAGGAGCGGAAAGAA+TGG + chr8.1:24277479-24277498 MS.gene058009:CDS 55.0%
CACCAAGCAATTGCAGGCGA+AGG + chr8.1:24277213-24277232 MS.gene058009:CDS 55.0%
CCAAGCAATTGCAGGCGAAG+GGG + chr8.1:24277215-24277234 MS.gene058009:CDS 55.0%
CTCCTCTTCAACGAGTGCCA+AGG - chr8.1:24279780-24279799 None:intergenic 55.0%
GAGGGGTGGGGATTTGGAAA+TGG + chr8.1:24277040-24277059 MS.gene058009:CDS 55.0%
GGCCAAGCCAATTCCCAAAC+AGG + chr8.1:24278208-24278227 MS.gene058009:intron 55.0%
GGCCAAGGAGCGGAAAGAAT+GGG + chr8.1:24277480-24277499 MS.gene058009:CDS 55.0%
GGGGTGGGGATTTGGAAATG+GGG + chr8.1:24277042-24277061 MS.gene058009:CDS 55.0%
GGTCAAGTGGACCGTGCAAA+TGG + chr8.1:24277676-24277695 MS.gene058009:CDS 55.0%
GTGTCCACACGTATCAACCG+TGG - chr8.1:24277308-24277327 None:intergenic 55.0%
TGCCTTGGCACTCGTTGAAG+AGG + chr8.1:24279775-24279794 MS.gene058009:CDS 55.0%
! CTTGTGCTCCGGTTTTGCAG+AGG + chr8.1:24277095-24277114 MS.gene058009:CDS 55.0%
! GCGGCCGCTATTTCCCTTAT+AGG - chr8.1:24279121-24279140 None:intergenic 55.0%
! TAACCAATGCCCAGGGGCAT+TGG - chr8.1:24279517-24279536 None:intergenic 55.0%
!! ATCTGGTGGTGGTGGTGGTA+AGG + chr8.1:24276967-24276986 MS.gene058009:CDS 55.0%
!! GTTGAATCTGGTGGTGGTGG+TGG + chr8.1:24276962-24276981 MS.gene058009:CDS 55.0%
!! TTTGGGAATTGGCTTGGCCC+AGG - chr8.1:24278207-24278226 None:intergenic 55.0%
CCCCTTCGCCTGCAATTGCT+TGG - chr8.1:24277218-24277237 None:intergenic 60.0%
GCAATTGCAGGCGAAGGGGA+AGG + chr8.1:24277219-24277238 MS.gene058009:CDS 60.0%
GCACCGAGTTCACAGCCTCT+TGG - chr8.1:24277348-24277367 None:intergenic 60.0%
GCAGCGCCAAAAAGAAGCCG+AGG + chr8.1:24277926-24277945 MS.gene058009:CDS 60.0%
TAGCCAATGCCCCTGGGCAT+TGG + chr8.1:24279511-24279530 MS.gene058009:intron 60.0%
!! TGAAGAGGAGCGCCGTTCCA+AGG + chr8.1:24279790-24279809 MS.gene058009:CDS 60.0%
! TGTGCCTGGGAGTGCGAGTG+CGG + chr8.1:24276919-24276938 MS.gene058009:CDS 65.0%
AGTGCGAGTGCGGGTGCGAG+GGG + chr8.1:24276929-24276948 MS.gene058009:CDS 70.0%
GAGTGCGAGTGCGGGTGCGA+GGG + chr8.1:24276928-24276947 MS.gene058009:CDS 70.0%
GCACTCGCACTCCCAGGCAC+AGG - chr8.1:24276920-24276939 None:intergenic 70.0%
! GTGCCTGGGAGTGCGAGTGC+GGG + chr8.1:24276920-24276939 MS.gene058009:CDS 70.0%
GCACCCGCACTCGCACTCCC+AGG - chr8.1:24276926-24276945 None:intergenic 75.0%
GGAGTGCGAGTGCGGGTGCG+AGG + chr8.1:24276927-24276946 MS.gene058009:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 24276737 24280246 24276737 ID=MS.gene058009
chr8.1 mRNA 24276737 24280246 24276737 ID=MS.gene058009.t1;Parent=MS.gene058009
chr8.1 exon 24276737 24277795 24276737 ID=MS.gene058009.t1.exon1;Parent=MS.gene058009.t1
chr8.1 CDS 24276737 24277795 24276737 ID=cds.MS.gene058009.t1;Parent=MS.gene058009.t1
chr8.1 exon 24277825 24277947 24277825 ID=MS.gene058009.t1.exon2;Parent=MS.gene058009.t1
chr8.1 CDS 24277825 24277947 24277825 ID=cds.MS.gene058009.t1;Parent=MS.gene058009.t1
chr8.1 exon 24279740 24280246 24279740 ID=MS.gene058009.t1.exon3;Parent=MS.gene058009.t1
chr8.1 CDS 24279740 24280246 24279740 ID=cds.MS.gene058009.t1;Parent=MS.gene058009.t1
Gene Sequence

>MS.gene058009

GGTGAGAATATGGATGAGCTTGAACCGGTTTTCGCTGATTTGAAGCATTTGGAGGAGTATTCTTTGGCTGGGATGGTGTGTTTGTTGCAACAGGTTAGGCCGAATTTGAGTAAAGGTGATGCAATGTGGTGTTTGCTAATGAGTGATCTTCATGTTGGGAAAGCTAGTACTATAGAGATTCCTGTGCCTGGGAGTGCGAGTGCGGGTGCGAGGGGAGCTGCTGTTGTTGAATCTGGTGGTGGTGGTGGTAAGGCTCGTACTAAACCGGTTGCTCATAGGTCTTTTCCACCCTGTAAGTTTCATGAGGGGTGGGGATTTGGAAATGGGGATTACCCCACGAATGCAAATGGGATATTGTCTTGTGCTCCGGTTTTGCAGAGGGAGATTGAATTCCCGAAGAGGTTTGATCTTTCTCCGCCAATGAAGTGCTTGTTGAAGAGAAATGTTGCCATGTTTGCTGCTGGTTTTAGAGCAAACACCAAGCAATTGCAGGCGAAGGGGAAGGCCAATGTTCTTGGTCGTAGTGCTGTGTCGAATTTGGATTCTCCGGTTGTATCTGGGGCTGAAACCACGGTTGATACGTGTGGACACTCTCGGGTTGTTGATAACCAAGAGGCTGTGAACTCGGTGCTGAGTAAATTTCGTGACTTGAATCTTGATGAAAATTTGGAGTTTGTGGCTGAGGATCAGAAGGATGAAGTGATAGTGAGTATATTTCATCAGATAAAGGATTTGGAAAAACAGGCCAAGGAGCGGAAAGAATGGGCTTATCAGAAAGCATTGCAGGCTGCGAAGAAGCTAAGCAGTGATTTGACTGAGCTCAAAACATTACGGATGGATAGAGAAGAGACCCAGAAATTGAAGAAAGGGAAACAGGCACTTGAGGACACAACCATGAAGAGACTCTCGGAGATGGAGAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCAAATGGAGCTGTGAGAAGATTAGAGACTGAGAATGCTGAAATCAGAGCAGAGATGGAGGCCTCCAAATTAAGTGCATCAGAGTCGGTGACAGCTTGCTTAGAAGTTGCAAAAAAGAGAAAAAGTACTTGAAGAAACTTCTAGCTTGGGAAAAACAGAAAGCTAAGCTGCAAAAGGAGATTTCTGATTTGAAAGAGAAGATATTAGAGGATCGAGAAGTGTCAGCTCAGAATAAGCAGCGCCAAAAAGAAGCCGAGGTTCTCTCTTCGCCCCTTATTATTTTATTTATATATATCTATTGACAATGCCACACACAAACCACCAAAAAGGAACAGAAAATATCATTCTGCTCTGTTTGCATAGAATGAGTTTATTGATCGGAATTGCATGTTGCATGTCAGAATAAAAGTAACATGTTTCAACCATAATCTGTGTGACTCATTTTGCACATTGAATTCCATTTGGTTGAACTTTACATGTAGTTTACGGCTTGAAACAAGTAGGAGTTTAAGTCCTGGGCCAAGCCAATTCCCAAACAGGGATTAGTCCACAGTCTCACCCAAAGAAAATTACTTGTTTCAAAATCAGACATCAACATGGCCTATACTAGTGTGACACAGTTTGCTATTGTCACGTTGAAATTGATCGTTTTGTCATAAAGGGATTTTCAGTCATTGAATGCATATCTAATTGGGAGATTAATATCTTATAGTTCAGTGTAGCAGTTTATGATTATTAGTTGAAAAAGATTACAATTTTGTATTCCTTTTCTTCTTTTTCGTGCCTTTGATGCATACTGGTAATTTATCAATGAACCATGTATGCATAGCTTGGAGACAAAACTGAGCCATTGTTTCATACGGCACATAATTGAAGTTTGTGTCAAGACATGGGGGTATACGGCACACTAATTCAAATTCTATGGCACATTTCAAATTTTCTGCATCCGTATCTTTGTTTGTCAATACTTGATTGCATGTATTTATGCACACACCAGAATAGTTCATGGCAGAATGTGGTTCGAAGCAGCTGCTCCAAAATATGATACAGCTGCTAAGCAGATAGCAGAATGACCATTACACCAAAGATAGATGCAATGTGAATTTTTTTATAATTTGTAATATACACATAATTGGTATTTGATACTAAAGGTCTCCAGTACTCAAGAGTCAAGACACATTTATCATTAATAATCAAAATCTCAAGTACTTCTTGATTCTCGGCTTCTTCTTGGCGCTGTGTATTCTGAGCCTCTTCCATGCAATTGTAATCTTATGGCCTATTTGTTTTTGTATCTAACAGGTAGAGGTTATAATTCTTATCTTATTTTATGTTATAACAATGTTGTTAAATAGCAGCATTAAAGCGATATAGCAAAACATATTTTGATAACTCTGCTATGAGAACTTCGACACTGTCCTAGTTTCCCTATAAGGGAAATAGCGGCCGCATGTGTGCTACACATGACTTATTTTTAAAATGGAAAAACTGAATAGTTATTGAATATTGCTACTATGTTCACCGTAGGACCTGAACTTTAAATACTTGAGTTTTGCTCTGCCTCCCTTCTAAATATTTTGATATTCTGTACTATATCACTTTTTAGTGTATTTGGTTGCTGCATATTCATGGGTGTTTATTTTGGTAGCCATATGAAAAAACTTGTTTGCTTGCTTCAATTCTTGATGATCCTAACTTATATTCTATAGGTATTTTCTTATTAATAAAGGCGTAAGTGACTTTAAGAAAGTGCTAATCAATGCCCTAATGGTACTGATTAATAAATCAAAAGTTATGAAGTTTTTCATATAACAATTCTTTAGCCAATGCCCCTGGGCATTGGTTAGCATGACTCTTGATATTATCACACCTGAATTTTCTTTTGTTGACTGTATATTCCTGTGATTTTGTTAGCAATGATCTGCCACTTCAACCAATAATACGTATCTTTCAAATAAATCTGTGCTGAAAAGTGCATCTCGTCACCAAAAAGAAAAACAATAATTTGTTATTTCTAAACCATTTATTTTGCATAATCCTTAATTACAGGCTAAATGGAAGGAGGAGTTGAAGGCTCAAGAAGATGCCTTGGCACTCGTTGAAGAGGAGCGCCGTTCCAAGGAAGCAGCTGAATCAGATAATAAGAGGGGGTTTGAGGCTTTGCGTCTGAAAATAGAATTAGATTTCCAGCGCCACAAGGATGATCTAAGCAGACTTGAGAATGATCTTTCGCGCCTTAAAGCATCTGTTCGATCTGCTGCATTGCATCACCAAAATACTTCACCCATCAAAGACTTTGAGGGTACAAAGCCTCAAAGAGAGACAATTGCTAAGCTGCTTCTGGATTTGGATGATTTATCAGAAAGTGAAGCTAATAACAACAGAGAATGCATTATATGTATGAAGGATGAAGTCTCCGTTGTTTTCTTGCCGTGTGCTCACCAAGTCATGTGTGCTAAATGCAGTGATGAGTACGGGAAGAATGGTAAGGCTGCTTGTCCTTGCTGCCGAGTTCAAATCCAACAGAGAATCCGTGTATTTGGGGCATGCTCGTAG

Protein sequence

>MS.gene058009.t1

GENMDELEPVFADLKHLEEYSLAGMVCLLQQVRPNLSKGDAMWCLLMSDLHVGKASTIEIPVPGSASAGARGAAVVESGGGGGKARTKPVAHRSFPPCKFHEGWGFGNGDYPTNANGILSCAPVLQREIEFPKRFDLSPPMKCLLKRNVAMFAAGFRANTKQLQAKGKANVLGRSAVSNLDSPVVSGAETTVDTCGHSRVVDNQEAVNSVLSKFRDLNLDENLEFVAEDQKDEVIVSIFHQIKDLEKQAKERKEWAYQKALQAAKKLSSDLTELKTLRMDREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANGAVRRLETENAEIRAEMEASKLSASESVTACLEKLLAWEKQKAKLQKEISDLKEKILEDREVSAQNKQRQKEAEAKWKEELKAQEDALALVEEERRSKEAAESDNKRGFEALRLKIELDFQRHKDDLSRLENDLSRLKASVRSAALHHQNTSPIKDFEGTKPQRETIAKLLLDLDDLSESEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKNGKAACPCCRVQIQQRIRVFGACS