Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056254.t1 | RHN82609.1 | 86.5 | 520 | 69 | 1 | 1 | 519 | 1 | 520 | 5.00E-236 | 827 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056254.t1 | Q9SSE9 | 32.5 | 421 | 220 | 6 | 149 | 518 | 85 | 492 | 1.8e-48 | 195.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056254.t1 | G7IE64 | 86.5 | 520 | 69 | 1 | 1 | 519 | 1 | 520 | 3.6e-236 | 827.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053542 | MS.gene056254 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene056254 | MS.gene057208 | 0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene056254 | MS.gene058979 | 0.804915 | 1.72E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene067173 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene056254 | MS.gene24067 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene056254 | MS.gene25696 | 0.812017 | 5.24E-51 | -1.69E-46 |
| MS.gene056254 | MS.gene31445 | 0.806184 | 9.30E-50 | -1.69E-46 |
| MS.gene056254 | MS.gene34232 | 0.815711 | 8.04E-52 | -1.69E-46 |
| MS.gene056254 | MS.gene35528 | 0.827012 | 1.98E-54 | -1.69E-46 |
| MS.gene056254 | MS.gene35529 | 0.828821 | 7.26E-55 | -1.69E-46 |
| MS.gene056254 | MS.gene35703 | 0.803402 | 3.55E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene49320 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene71308 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene75587 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene056254 | MS.gene79448 | 0.802172 | 6.36E-49 | -1.69E-46 |
| MS.gene056254 | MS.gene84020 | 0.807397 | 5.16E-50 | -1.69E-46 |
| MS.gene056254 | MS.gene94498 | 0.800243 | 1.58E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056254.t1 | MTR_1g114070 | 90.192 | 520 | 50 | 1 | 1 | 519 | 1 | 520 | 0.0 | 879 |
| MS.gene056254.t1 | MTR_1g114150 | 64.722 | 360 | 124 | 2 | 159 | 518 | 278 | 634 | 2.15e-153 | 462 |
| MS.gene056254.t1 | MTR_1g114150 | 50.000 | 162 | 59 | 5 | 42 | 194 | 7 | 155 | 9.02e-26 | 112 |
| MS.gene056254.t1 | MTR_1g114150 | 64.722 | 360 | 124 | 2 | 159 | 518 | 278 | 634 | 2.35e-152 | 463 |
| MS.gene056254.t1 | MTR_1g114150 | 50.000 | 162 | 59 | 5 | 42 | 194 | 7 | 155 | 6.91e-26 | 112 |
| MS.gene056254.t1 | MTR_1g114130 | 59.057 | 403 | 158 | 4 | 135 | 533 | 237 | 636 | 2.79e-146 | 448 |
| MS.gene056254.t1 | MTR_1g114130 | 63.131 | 198 | 65 | 2 | 1 | 194 | 1 | 194 | 1.03e-61 | 219 |
| MS.gene056254.t1 | MTR_1g069565 | 70.492 | 305 | 89 | 1 | 224 | 527 | 144 | 448 | 1.10e-138 | 423 |
| MS.gene056254.t1 | MTR_1g069565 | 70.492 | 305 | 89 | 1 | 224 | 527 | 144 | 448 | 6.99e-138 | 422 |
| MS.gene056254.t1 | MTR_5g065200 | 62.975 | 316 | 116 | 1 | 213 | 527 | 129 | 444 | 1.61e-126 | 390 |
| MS.gene056254.t1 | MTR_8g062940 | 51.864 | 295 | 127 | 2 | 224 | 518 | 33 | 312 | 3.44e-92 | 286 |
| MS.gene056254.t1 | MTR_0020s0100 | 60.082 | 243 | 94 | 2 | 288 | 527 | 81 | 323 | 9.05e-91 | 293 |
| MS.gene056254.t1 | MTR_5g047620 | 58.921 | 241 | 95 | 2 | 288 | 527 | 139 | 376 | 1.10e-82 | 274 |
| MS.gene056254.t1 | MTR_7g117445 | 34.383 | 413 | 241 | 10 | 139 | 527 | 43 | 449 | 2.71e-57 | 205 |
| MS.gene056254.t1 | MTR_7g117445 | 34.383 | 413 | 241 | 10 | 139 | 527 | 43 | 449 | 3.55e-57 | 206 |
| MS.gene056254.t1 | MTR_7g117445 | 34.383 | 413 | 241 | 10 | 139 | 527 | 43 | 449 | 4.11e-57 | 205 |
| MS.gene056254.t1 | MTR_7g117445 | 34.383 | 413 | 241 | 10 | 139 | 527 | 43 | 449 | 5.61e-57 | 205 |
| MS.gene056254.t1 | MTR_4g132540 | 37.226 | 274 | 150 | 8 | 224 | 493 | 168 | 423 | 1.01e-47 | 178 |
| MS.gene056254.t1 | MTR_1g008060 | 37.874 | 301 | 148 | 9 | 224 | 518 | 870 | 1137 | 3.32e-47 | 177 |
| MS.gene056254.t1 | MTR_1g008060 | 37.874 | 301 | 148 | 9 | 224 | 518 | 861 | 1128 | 3.74e-47 | 177 |
| MS.gene056254.t1 | MTR_2g024140 | 37.143 | 280 | 150 | 8 | 224 | 498 | 34 | 292 | 7.81e-47 | 174 |
| MS.gene056254.t1 | MTR_2g024270 | 39.785 | 279 | 150 | 7 | 224 | 498 | 154 | 418 | 6.51e-46 | 172 |
| MS.gene056254.t1 | MTR_6g051900 | 58.219 | 146 | 47 | 3 | 1 | 138 | 1 | 140 | 2.05e-40 | 143 |
| MS.gene056254.t1 | MTR_5g098590 | 55.294 | 170 | 47 | 7 | 41 | 202 | 3 | 151 | 9.16e-36 | 131 |
| MS.gene056254.t1 | MTR_1g083120 | 31.599 | 269 | 153 | 6 | 224 | 491 | 215 | 453 | 1.84e-35 | 142 |
| MS.gene056254.t1 | MTR_1g083120 | 31.599 | 269 | 153 | 6 | 224 | 491 | 198 | 436 | 2.17e-35 | 141 |
| MS.gene056254.t1 | MTR_1g083120 | 31.599 | 269 | 153 | 6 | 224 | 491 | 198 | 436 | 2.32e-35 | 141 |
| MS.gene056254.t1 | MTR_1g083120 | 31.599 | 269 | 153 | 6 | 224 | 491 | 198 | 436 | 2.66e-35 | 141 |
| MS.gene056254.t1 | MTR_2g011630 | 31.579 | 304 | 185 | 9 | 224 | 519 | 207 | 495 | 1.36e-29 | 124 |
| MS.gene056254.t1 | MTR_4g091520 | 37.143 | 175 | 100 | 4 | 224 | 389 | 260 | 433 | 1.32e-28 | 121 |
| MS.gene056254.t1 | MTR_4g091520 | 37.143 | 175 | 100 | 4 | 224 | 389 | 260 | 433 | 1.51e-28 | 121 |
| MS.gene056254.t1 | MTR_4g091520 | 37.143 | 175 | 100 | 4 | 224 | 389 | 260 | 433 | 1.58e-28 | 121 |
| MS.gene056254.t1 | MTR_4g091520 | 37.143 | 175 | 100 | 4 | 224 | 389 | 260 | 433 | 1.61e-28 | 121 |
| MS.gene056254.t1 | MTR_1g114110 | 53.261 | 92 | 35 | 2 | 55 | 138 | 1 | 92 | 4.63e-18 | 79.7 |
| MS.gene056254.t1 | MTR_2g011630 | 30.342 | 234 | 142 | 7 | 293 | 519 | 64 | 283 | 1.31e-16 | 83.6 |
| MS.gene056254.t1 | MTR_2g011630 | 30.342 | 234 | 142 | 7 | 293 | 519 | 32 | 251 | 1.53e-16 | 83.6 |
| MS.gene056254.t1 | MTR_6g051930 | 86.207 | 29 | 4 | 0 | 355 | 383 | 45 | 73 | 7.71e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056254.t1 | AT1G11950 | 37.874 | 301 | 167 | 7 | 219 | 518 | 188 | 469 | 3.46e-50 | 184 |
| MS.gene056254.t1 | AT1G11950 | 37.874 | 301 | 167 | 7 | 219 | 518 | 188 | 469 | 4.69e-50 | 185 |
| MS.gene056254.t1 | AT1G11950 | 37.874 | 301 | 167 | 7 | 219 | 518 | 188 | 469 | 4.69e-50 | 185 |
| MS.gene056254.t1 | AT3G07610 | 38.843 | 242 | 146 | 2 | 170 | 410 | 100 | 340 | 2.76e-49 | 183 |
| MS.gene056254.t1 | AT3G07610 | 38.843 | 242 | 146 | 2 | 170 | 410 | 100 | 340 | 3.75e-49 | 183 |
| MS.gene056254.t1 | AT1G62310 | 38.571 | 280 | 160 | 5 | 223 | 501 | 208 | 476 | 5.04e-49 | 182 |
| MS.gene056254.t1 | AT3G07610 | 35.540 | 287 | 175 | 3 | 133 | 410 | 55 | 340 | 6.80e-49 | 181 |
| MS.gene056254.t1 | AT1G09060 | 28.421 | 380 | 240 | 8 | 115 | 490 | 112 | 463 | 2.37e-36 | 144 |
| MS.gene056254.t1 | AT1G09060 | 28.421 | 380 | 240 | 8 | 115 | 490 | 112 | 463 | 2.37e-36 | 144 |
| MS.gene056254.t1 | AT1G09060 | 28.421 | 380 | 240 | 8 | 115 | 490 | 98 | 449 | 3.05e-36 | 144 |
| MS.gene056254.t1 | AT1G09060 | 28.421 | 380 | 240 | 8 | 115 | 490 | 98 | 449 | 3.05e-36 | 144 |
| MS.gene056254.t1 | AT4G00990 | 31.410 | 312 | 188 | 9 | 220 | 527 | 76 | 365 | 7.94e-34 | 137 |
| MS.gene056254.t1 | AT4G00990 | 31.410 | 312 | 188 | 9 | 220 | 527 | 76 | 365 | 9.63e-34 | 136 |
| MS.gene056254.t1 | AT4G00990 | 31.410 | 312 | 188 | 9 | 220 | 527 | 76 | 365 | 9.65e-34 | 136 |
| MS.gene056254.t1 | AT4G21430 | 29.299 | 157 | 108 | 3 | 224 | 378 | 227 | 382 | 1.57e-11 | 67.8 |
Find 115 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCACTCTCTTTCAATTT+AGG | 0.147719 | 1.3:-76936710 | None:intergenic |
| AAATCATACTCAAGCTTAAT+TGG | 0.220679 | 1.3:-76937376 | None:intergenic |
| TCACATTCATTATCAGCTTT+TGG | 0.248622 | 1.3:-76937538 | None:intergenic |
| TGTCATTTCTTTGACATTGA+TGG | 0.286327 | 1.3:-76936421 | None:intergenic |
| CTCCGTGGTGGGAAGCTTCT+AGG | 0.287089 | 1.3:+76937343 | MS.gene056254:CDS |
| ACTAACTCAGAGATGCAATT+TGG | 0.317312 | 1.3:-76937595 | None:intergenic |
| CGACAGCGACACCACCGTTT+TGG | 0.322177 | 1.3:-76935939 | None:intergenic |
| AGGGATGCAGAAGCGTTGTT+AGG | 0.362991 | 1.3:+76936106 | MS.gene056254:CDS |
| ATTCGTGAGTGGTCAAGATC+TGG | 0.381498 | 1.3:+76937481 | MS.gene056254:CDS |
| CTAAAGATGAGCGTGTGTTC+TGG | 0.394804 | 1.3:+76937153 | MS.gene056254:CDS |
| CTCAAAGCTAAATATAAAAC+CGG | 0.396606 | 1.3:+76937121 | MS.gene056254:CDS |
| CTCAACCTCCTCCTCGTTGT+TGG | 0.396999 | 1.3:-76936914 | None:intergenic |
| GTTCTTGCTCGAAACCTGTT+AGG | 0.397008 | 1.3:+76937686 | MS.gene056254:CDS |
| TAGAGGAGACTCGTGATAAT+AGG | 0.397753 | 1.3:+76937662 | MS.gene056254:CDS |
| TGATCAGGAATGGGTTCATC+TGG | 0.401180 | 1.3:-76935725 | None:intergenic |
| ATCCTCCAACGGTACCGTTT+CGG | 0.404627 | 1.3:-76935786 | None:intergenic |
| ATATCATCGGTGTACCTAAC+AGG | 0.407455 | 1.3:-76937700 | None:intergenic |
| GACGATGAAGGTTCGGTTGA+AGG | 0.422097 | 1.3:+76935965 | MS.gene056254:CDS |
| CAGAAATTGAAAAGATGAAG+AGG | 0.429960 | 1.3:+76936086 | MS.gene056254:CDS |
| CGAGGTCGCAATTATCTACA+TGG | 0.434006 | 1.3:+76937400 | MS.gene056254:CDS |
| AGGCTCTTCATCATTTCAAC+TGG | 0.442693 | 1.3:+76936171 | MS.gene056254:CDS |
| GGAATGGGTTCATCTGGATC+AGG | 0.444988 | 1.3:-76935719 | None:intergenic |
| AACAGAATAAAGGAAGAAAC+TGG | 0.451192 | 1.3:+76936130 | MS.gene056254:CDS |
| TACCGTTTCGGCGCCAACAT+TGG | 0.457827 | 1.3:-76935774 | None:intergenic |
| CGCCGAAACGGTACCGTTGG+AGG | 0.461207 | 1.3:+76935784 | MS.gene056254:CDS |
| TCTTCCACATTTAAGACGGT+TGG | 0.461419 | 1.3:+76936963 | MS.gene056254:CDS |
| GAAGTATCCTTCTCAGTTCA+AGG | 0.464781 | 1.3:-76937570 | None:intergenic |
| GGCCAATGTTGGCGCCGAAA+CGG | 0.467500 | 1.3:+76935772 | MS.gene056254:CDS |
| GTTTCTCGATGATCATGATC+AGG | 0.474522 | 1.3:-76935740 | None:intergenic |
| TTAAGTTTCTTGTGGACTTG+TGG | 0.479397 | 1.3:-76936253 | None:intergenic |
| AGCTGAAACGTCGTCGTTGA+AGG | 0.484777 | 1.3:+76935838 | MS.gene056254:CDS |
| CGATGATCATGATCAGGAAT+GGG | 0.491693 | 1.3:-76935734 | None:intergenic |
| AGGTGATAACATTGCAGCTA+GGG | 0.495234 | 1.3:+76935985 | MS.gene056254:CDS |
| TCGATGATCATGATCAGGAA+TGG | 0.497827 | 1.3:-76935735 | None:intergenic |
| GTTGTTAGGGAACAGAATAA+AGG | 0.500566 | 1.3:+76936120 | MS.gene056254:CDS |
| ATCAATGTCAAAGAAATGAC+AGG | 0.501804 | 1.3:+76936423 | MS.gene056254:CDS |
| GAGACGCGGCAGAAAGAGAA+AGG | 0.502047 | 1.3:+76936201 | MS.gene056254:CDS |
| GCACATCATGTATACAAAAG+TGG | 0.504161 | 1.3:+76936489 | MS.gene056254:CDS |
| GTCGAAGGACGATGAAGGTT+CGG | 0.505191 | 1.3:+76935958 | MS.gene056254:CDS |
| GGGATGCAGAAGCGTTGTTA+GGG | 0.509891 | 1.3:+76936107 | MS.gene056254:CDS |
| ACTGGTAAAGATGTGGTAGC+TGG | 0.518953 | 1.3:+76936148 | MS.gene056254:CDS |
| CGCAGCAACAGAGGAGACAA+AGG | 0.527535 | 1.3:-76937318 | None:intergenic |
| GCTGATAATGAATGTGATCA+TGG | 0.528933 | 1.3:+76937544 | MS.gene056254:CDS |
| TGAAGAACAAATGATTGAGA+AGG | 0.530667 | 1.3:+76936987 | MS.gene056254:CDS |
| GTTGCTGCGAGCTCCGTGGT+GGG | 0.531732 | 1.3:+76937332 | MS.gene056254:CDS |
| ATGGTTTCCTTGAACTGAGA+AGG | 0.533086 | 1.3:+76937563 | MS.gene056254:CDS |
| TATAGGAATACCTCGTCTCC+TGG | 0.539286 | 1.3:-76937019 | None:intergenic |
| TATGCATGTTGGCGCCAAAA+CGG | 0.540397 | 1.3:+76935925 | MS.gene056254:CDS |
| AACGGTGGTGTCGCTGTCGA+AGG | 0.540573 | 1.3:+76935943 | MS.gene056254:CDS |
| TGTGTTATTGTGTATATCAT+CGG | 0.540704 | 1.3:-76937713 | None:intergenic |
| TTCGTGAGTGGTCAAGATCT+GGG | 0.542666 | 1.3:+76937482 | MS.gene056254:CDS |
| TCGGCGCCAACATTGGCCGT+AGG | 0.543112 | 1.3:-76935767 | None:intergenic |
| TTAGATGCACAAAATGCAAA+CGG | 0.550175 | 1.3:+76936456 | MS.gene056254:CDS |
| TCATCCAACCGTCTTAAATG+TGG | 0.550657 | 1.3:-76936967 | None:intergenic |
| AACTCAGAGATGCAATTTGG+AGG | 0.551495 | 1.3:-76937592 | None:intergenic |
| TGGTGTAGATCTACAGCCCT+TGG | 0.555022 | 1.3:-76937783 | None:intergenic |
| TTGACATTGATGGCACATTG+AGG | 0.559359 | 1.3:-76936411 | None:intergenic |
| GTGGCACAAGCTATCGGTGT+TGG | 0.561909 | 1.3:+76935815 | MS.gene056254:CDS |
| TGTTGCTGCGAGCTCCGTGG+TGG | 0.562600 | 1.3:+76937331 | MS.gene056254:CDS |
| TTCTCTAAGTATCTGCTGAA+AGG | 0.564863 | 1.3:+76936937 | MS.gene056254:CDS |
| GACTTCTTCCACATTTAAGA+CGG | 0.566290 | 1.3:+76936959 | MS.gene056254:CDS |
| AGAAATTGAAAAGATGAAGA+GGG | 0.567266 | 1.3:+76936087 | MS.gene056254:CDS |
| ATTTGAAATTTCAATGGCGG+AGG | 0.570807 | 1.3:+76935640 | None:intergenic |
| AAGGTGATAACATTGCAGCT+AGG | 0.571180 | 1.3:+76935984 | MS.gene056254:CDS |
| ACACAACCTACGGCCAATGT+TGG | 0.573109 | 1.3:+76935761 | MS.gene056254:CDS |
| ACAGCACACAGGGCATGCCT+TGG | 0.575809 | 1.3:-76936735 | None:intergenic |
| TGTCAAAGAAATGACAGGGC+CGG | 0.578080 | 1.3:+76936428 | MS.gene056254:CDS |
| CGCCGCCGCAGCTTTAGCAG+AGG | 0.580166 | 1.3:-76936014 | None:intergenic |
| CACGGAGCTCGCAGCAACAG+AGG | 0.580415 | 1.3:-76937327 | None:intergenic |
| TGCAATTATCACAGCACACA+GGG | 0.584315 | 1.3:-76936745 | None:intergenic |
| ACTATAGGAAATGAAGCGTA+AGG | 0.584966 | 1.3:+76936885 | MS.gene056254:intron |
| GGTGACGTGGCACAAGCTAT+CGG | 0.585670 | 1.3:+76935809 | MS.gene056254:CDS |
| AATCAAGCTTCAAGATGTAG+AGG | 0.589159 | 1.3:+76937645 | MS.gene056254:CDS |
| TGAAACCAACAACGAGGAGG+AGG | 0.589775 | 1.3:+76936909 | MS.gene056254:CDS |
| GAATGGGTTCATCTGGATCA+GGG | 0.590909 | 1.3:-76935718 | None:intergenic |
| TGGACAAGGAATGCTACCAT+CGG | 0.593451 | 1.3:-76937518 | None:intergenic |
| GCAATTGCAAAGCATGCTTG+CGG | 0.593478 | 1.3:+76936765 | MS.gene056254:CDS |
| TGGCGCCGAAACGGTACCGT+TGG | 0.594492 | 1.3:+76935781 | MS.gene056254:CDS |
| AATCAGCGAGAGTAATGCTA+AGG | 0.594627 | 1.3:+76936276 | MS.gene056254:CDS |
| TTGAGAAGGAAAGAGAAGCC+AGG | 0.596035 | 1.3:+76937001 | MS.gene056254:CDS |
| GAAAGAGAAGCCAGGAGACG+AGG | 0.596795 | 1.3:+76937009 | MS.gene056254:CDS |
| AGAAAGTGTATCACATGCAG+AGG | 0.606509 | 1.3:+76937447 | MS.gene056254:CDS |
| CACCTAGAAGCTTCCCACCA+CGG | 0.608942 | 1.3:-76937345 | None:intergenic |
| TCATCGAGAAACACAACCTA+CGG | 0.610549 | 1.3:+76935751 | MS.gene056254:CDS |
| GGGTTCATCTGGATCAGGGA+GGG | 0.610921 | 1.3:-76935714 | None:intergenic |
| GGAAGAAACTGGTAAAGATG+TGG | 0.613492 | 1.3:+76936141 | MS.gene056254:CDS |
| GAAACGGTACCGTTGGAGGA+TGG | 0.613747 | 1.3:+76935788 | MS.gene056254:CDS |
| CTCTGTTGCTGCGAGCTCCG+TGG | 0.620459 | 1.3:+76937328 | MS.gene056254:CDS |
| TTGCAATTATCACAGCACAC+AGG | 0.625183 | 1.3:-76936746 | None:intergenic |
| GAAAGAGAGTGATATTGCCA+AGG | 0.625820 | 1.3:+76936718 | MS.gene056254:CDS |
| TCGCTGTCGAAGGACGATGA+AGG | 0.626327 | 1.3:+76935953 | MS.gene056254:CDS |
| TATACACAATAACACAAGGA+AGG | 0.636388 | 1.3:+76937720 | MS.gene056254:CDS |
| ATCCTCTGCTAAAGCTGCGG+CGG | 0.638471 | 1.3:+76936012 | MS.gene056254:CDS |
| ACCGTTGGAGGATGGTGACG+TGG | 0.648574 | 1.3:+76935796 | MS.gene056254:CDS |
| GGTAAAGATGTGGTAGCTGG+AGG | 0.648889 | 1.3:+76936151 | MS.gene056254:CDS |
| TTCATCCTCTGCTAAAGCTG+CGG | 0.652304 | 1.3:+76936009 | MS.gene056254:CDS |
| TCATCTTTAGAATAATCCGC+CGG | 0.653440 | 1.3:-76937140 | None:intergenic |
| CGTGGTGGGAAGCTTCTAGG+TGG | 0.658159 | 1.3:+76937346 | MS.gene056254:CDS |
| GCGGCGGCGATAATGAAATG+CGG | 0.661761 | 1.3:+76936028 | MS.gene056254:CDS |
| AAAGCTAAATATAAAACCGG+CGG | 0.661902 | 1.3:+76937124 | MS.gene056254:CDS |
| GCCACGTCACCATCCTCCAA+CGG | 0.665173 | 1.3:-76935797 | None:intergenic |
| GGGTGGCATGCAAATGCCGA+TGG | 0.671435 | 1.3:+76937502 | MS.gene056254:CDS |
| ATGAGTCTACGATTCGTGAG+TGG | 0.678627 | 1.3:+76937470 | MS.gene056254:CDS |
| ACGCGGCAGAAAGAGAAAGG+CGG | 0.678843 | 1.3:+76936204 | MS.gene056254:CDS |
| TGGGTTCATCTGGATCAGGG+AGG | 0.685323 | 1.3:-76935715 | None:intergenic |
| TCAATGTCAAAGAAATGACA+GGG | 0.687101 | 1.3:+76936424 | MS.gene056254:CDS |
| GGTCGCAATTATCTACATGG+TGG | 0.698999 | 1.3:+76937403 | MS.gene056254:CDS |
| GGCTGAAACCAACAACGAGG+AGG | 0.705772 | 1.3:+76936906 | MS.gene056254:CDS |
| ATGATATACACAATAACACA+AGG | 0.707929 | 1.3:+76937716 | MS.gene056254:CDS |
| GGACGATGAACGTGATGACG+TGG | 0.712626 | 1.3:+76935859 | MS.gene056254:CDS |
| GCATGTTGGCGCCAAAACGG+TGG | 0.714446 | 1.3:+76935928 | MS.gene056254:CDS |
| CAACTGGTGAGAAAGAGACG+CGG | 0.745058 | 1.3:+76936187 | MS.gene056254:CDS |
| CGATGAACGTGATGACGTGG+TGG | 0.763971 | 1.3:+76935862 | MS.gene056254:CDS |
| GTGAGTGGTCAAGATCTGGG+TGG | 0.773278 | 1.3:+76937485 | MS.gene056254:CDS |
| TAAGGCTGAAACCAACAACG+AGG | 0.802053 | 1.3:+76936903 | MS.gene056254:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTATAATTTGATTTT+GGG | + | chr1.3:76937075-76937094 | MS.gene056254:intron | 10.0% |
| !!! | TTCATTTTATAATTTGATTT+TGG | + | chr1.3:76937074-76937093 | MS.gene056254:intron | 10.0% |
| !! | TAGATTTCAAATATAGACTA+CGG | - | chr1.3:76936853-76936872 | None:intergenic | 20.0% |
| !!! | ATATTTGAAATCTATCCATT+TGG | + | chr1.3:76936859-76936878 | MS.gene056254:intron | 20.0% |
| ! | AAATCATACTCAAGCTTAAT+TGG | - | chr1.3:76937379-76937398 | None:intergenic | 25.0% |
| ! | ACAAAGTAAAACAGAAGTTA+AGG | - | chr1.3:76936523-76936542 | None:intergenic | 25.0% |
| ! | AGAAATTGAAAAGATGAAGA+GGG | + | chr1.3:76936087-76936106 | MS.gene056254:CDS | 25.0% |
| ! | ATATCACTCTCTTTCAATTT+AGG | - | chr1.3:76936713-76936732 | None:intergenic | 25.0% |
| ! | ATGATATACACAATAACACA+AGG | + | chr1.3:76937716-76937735 | MS.gene056254:CDS | 25.0% |
| ! | ATTTCCTATAGTAAACCAAA+TGG | - | chr1.3:76936877-76936896 | None:intergenic | 25.0% |
| ! | CTCAAAGCTAAATATAAAAC+CGG | + | chr1.3:76937121-76937140 | MS.gene056254:CDS | 25.0% |
| ! | CTGCTCATTTATATATGTTT+GGG | + | chr1.3:76936320-76936339 | MS.gene056254:intron | 25.0% |
| ! | TATTGCACATATTACATGTT+TGG | + | chr1.3:76936628-76936647 | MS.gene056254:intron | 25.0% |
| ! | TCTGCTCATTTATATATGTT+TGG | + | chr1.3:76936319-76936338 | MS.gene056254:intron | 25.0% |
| ! | TGTAATATGTGCAATAACTT+CGG | - | chr1.3:76936624-76936643 | None:intergenic | 25.0% |
| !! | ACAAATTTTTATACTGTCCA+AGG | + | chr1.3:76937766-76937785 | MS.gene056254:CDS | 25.0% |
| !! | CAAATTTTCTCTGACTATAT+AGG | - | chr1.3:76937039-76937058 | None:intergenic | 25.0% |
| !! | CAAATTTTTATACTGTCCAA+GGG | + | chr1.3:76937767-76937786 | MS.gene056254:CDS | 25.0% |
| !! | CATATTACATGTTTGGATTT+TGG | + | chr1.3:76936635-76936654 | MS.gene056254:intron | 25.0% |
| !! | CATTTATATATGTTTGGGTT+TGG | + | chr1.3:76936325-76936344 | MS.gene056254:intron | 25.0% |
| !! | TGTGTTATTGTGTATATCAT+CGG | - | chr1.3:76937716-76937735 | None:intergenic | 25.0% |
| !!! | AATATGCCTTGTTTGATAAT+TGG | + | chr1.3:76936590-76936609 | MS.gene056254:intron | 25.0% |
| !!! | ATATGCCTTGTTTGATAATT+GGG | + | chr1.3:76936591-76936610 | MS.gene056254:intron | 25.0% |
| !!! | TTAATCAACAGTGTTTTGAA+GGG | + | chr1.3:76936384-76936403 | MS.gene056254:intron | 25.0% |
| AAAGCTAAATATAAAACCGG+CGG | + | chr1.3:76937124-76937143 | MS.gene056254:CDS | 30.0% | |
| AACAGAATAAAGGAAGAAAC+TGG | + | chr1.3:76936130-76936149 | MS.gene056254:CDS | 30.0% | |
| AAGAATAGTTAATCGTGGAA+GGG | - | chr1.3:76936821-76936840 | None:intergenic | 30.0% | |
| ATCAATGTCAAAGAAATGAC+AGG | + | chr1.3:76936423-76936442 | MS.gene056254:CDS | 30.0% | |
| ATCAGAAGAATAGTTAATCG+TGG | - | chr1.3:76936826-76936845 | None:intergenic | 30.0% | |
| CAGAAATTGAAAAGATGAAG+AGG | + | chr1.3:76936086-76936105 | MS.gene056254:CDS | 30.0% | |
| GAAAAACAAGATATGCATGT+TGG | + | chr1.3:76935914-76935933 | MS.gene056254:CDS | 30.0% | |
| TACATCCCAATTATCAAACA+AGG | - | chr1.3:76936599-76936618 | None:intergenic | 30.0% | |
| TATACACAATAACACAAGGA+AGG | + | chr1.3:76937720-76937739 | MS.gene056254:CDS | 30.0% | |
| TCAATGTCAAAGAAATGACA+GGG | + | chr1.3:76936424-76936443 | MS.gene056254:CDS | 30.0% | |
| TGAAGAACAAATGATTGAGA+AGG | + | chr1.3:76936987-76937006 | MS.gene056254:CDS | 30.0% | |
| TTAGATGCACAAAATGCAAA+CGG | + | chr1.3:76936456-76936475 | MS.gene056254:CDS | 30.0% | |
| ! | ATTTAGGATACCTTAGCAAA+AGG | - | chr1.3:76936697-76936716 | None:intergenic | 30.0% |
| ! | CTATCCATTTGGTTTACTAT+AGG | + | chr1.3:76936870-76936889 | MS.gene056254:intron | 30.0% |
| ! | TCACATTCATTATCAGCTTT+TGG | - | chr1.3:76937541-76937560 | None:intergenic | 30.0% |
| ! | TGTCATTTCTTTGACATTGA+TGG | - | chr1.3:76936424-76936443 | None:intergenic | 30.0% |
| !! | CTTAATCAACAGTGTTTTGA+AGG | + | chr1.3:76936383-76936402 | MS.gene056254:intron | 30.0% |
| !!! | ATATCTTGTTTTTCTCGATC+AGG | - | chr1.3:76935908-76935927 | None:intergenic | 30.0% |
| !!! | ATTTTGGGATGTGAATTACA+GGG | + | chr1.3:76937090-76937109 | MS.gene056254:intron | 30.0% |
| !!! | TAATCAACAGTGTTTTGAAG+GGG | + | chr1.3:76936385-76936404 | MS.gene056254:intron | 30.0% |
| !!! | TTTTTTGTTGCCTTTTGCTA+AGG | + | chr1.3:76936684-76936703 | MS.gene056254:intron | 30.0% |
| AATCAAGCTTCAAGATGTAG+AGG | + | chr1.3:76937645-76937664 | MS.gene056254:CDS | 35.0% | |
| ACTAACTCAGAGATGCAATT+TGG | - | chr1.3:76937598-76937617 | None:intergenic | 35.0% | |
| ACTATAGGAAATGAAGCGTA+AGG | + | chr1.3:76936885-76936904 | MS.gene056254:intron | 35.0% | |
| AGAACAAACTGACACAACAT+AGG | - | chr1.3:76936560-76936579 | None:intergenic | 35.0% | |
| GAAAGAAACCACCAAAAATG+AGG | + | chr1.3:76936228-76936247 | MS.gene056254:CDS | 35.0% | |
| GAAGAATAGTTAATCGTGGA+AGG | - | chr1.3:76936822-76936841 | None:intergenic | 35.0% | |
| GACTTCTTCCACATTTAAGA+CGG | + | chr1.3:76936959-76936978 | MS.gene056254:CDS | 35.0% | |
| GCACATCATGTATACAAAAG+TGG | + | chr1.3:76936489-76936508 | MS.gene056254:CDS | 35.0% | |
| GTTGTTAGGGAACAGAATAA+AGG | + | chr1.3:76936120-76936139 | MS.gene056254:CDS | 35.0% | |
| TTAAGTTTCTTGTGGACTTG+TGG | - | chr1.3:76936256-76936275 | None:intergenic | 35.0% | |
| TTCTCTAAGTATCTGCTGAA+AGG | + | chr1.3:76936937-76936956 | MS.gene056254:CDS | 35.0% | |
| ! | AAGCTTGAGTATGATTTTCG+AGG | + | chr1.3:76937382-76937401 | MS.gene056254:CDS | 35.0% |
| ! | GCTGATAATGAATGTGATCA+TGG | + | chr1.3:76937544-76937563 | MS.gene056254:CDS | 35.0% |
| ! | TCATTATCAGCTTTTGGACA+AGG | - | chr1.3:76937535-76937554 | None:intergenic | 35.0% |
| !! | TCATCTTTAGAATAATCCGC+CGG | - | chr1.3:76937143-76937162 | None:intergenic | 35.0% |
| !!! | CGCTGATTTTAAGTTTCTTG+TGG | - | chr1.3:76936264-76936283 | None:intergenic | 35.0% |
| !!! | GATTTTGGGATGTGAATTAC+AGG | + | chr1.3:76937089-76937108 | MS.gene056254:intron | 35.0% |
| AACTCAGAGATGCAATTTGG+AGG | - | chr1.3:76937595-76937614 | None:intergenic | 40.0% | |
| AAGGTGATAACATTGCAGCT+AGG | + | chr1.3:76935984-76936003 | MS.gene056254:CDS | 40.0% | |
| AATAGTTAATCGTGGAAGGG+TGG | - | chr1.3:76936818-76936837 | None:intergenic | 40.0% | |
| AATCAGCGAGAGTAATGCTA+AGG | + | chr1.3:76936276-76936295 | MS.gene056254:CDS | 40.0% | |
| AGGCTCTTCATCATTTCAAC+TGG | + | chr1.3:76936171-76936190 | MS.gene056254:CDS | 40.0% | |
| AGGTGATAACATTGCAGCTA+GGG | + | chr1.3:76935985-76936004 | MS.gene056254:CDS | 40.0% | |
| ATATCATCGGTGTACCTAAC+AGG | - | chr1.3:76937703-76937722 | None:intergenic | 40.0% | |
| ATGGTTTCCTTGAACTGAGA+AGG | + | chr1.3:76937563-76937582 | MS.gene056254:CDS | 40.0% | |
| CGATGATCATGATCAGGAAT+GGG | - | chr1.3:76935737-76935756 | None:intergenic | 40.0% | |
| GAAAGAGAGTGATATTGCCA+AGG | + | chr1.3:76936718-76936737 | MS.gene056254:CDS | 40.0% | |
| GGAAGAAACTGGTAAAGATG+TGG | + | chr1.3:76936141-76936160 | MS.gene056254:CDS | 40.0% | |
| GGCAGAAAGAAAAAGAAACG+TGG | + | chr1.3:76936049-76936068 | MS.gene056254:CDS | 40.0% | |
| GTTTCTCGATGATCATGATC+AGG | - | chr1.3:76935743-76935762 | None:intergenic | 40.0% | |
| TAGAGGAGACTCGTGATAAT+AGG | + | chr1.3:76937662-76937681 | MS.gene056254:CDS | 40.0% | |
| TCATCCAACCGTCTTAAATG+TGG | - | chr1.3:76936970-76936989 | None:intergenic | 40.0% | |
| TCATCGAGAAACACAACCTA+CGG | + | chr1.3:76935751-76935770 | MS.gene056254:CDS | 40.0% | |
| TCGATGATCATGATCAGGAA+TGG | - | chr1.3:76935738-76935757 | None:intergenic | 40.0% | |
| TGCAATTATCACAGCACACA+GGG | - | chr1.3:76936748-76936767 | None:intergenic | 40.0% | |
| TGTTCTGGTAAGGACTGATT+TGG | + | chr1.3:76937168-76937187 | MS.gene056254:intron | 40.0% | |
| TTGCAATTATCACAGCACAC+AGG | - | chr1.3:76936749-76936768 | None:intergenic | 40.0% | |
| ! | AGAAAGTGTATCACATGCAG+AGG | + | chr1.3:76937447-76937466 | MS.gene056254:CDS | 40.0% |
| ! | AGCATTTTGTACAGCTTCTG+TGG | - | chr1.3:76937291-76937310 | None:intergenic | 40.0% |
| ! | GAAGTATCCTTCTCAGTTCA+AGG | - | chr1.3:76937573-76937592 | None:intergenic | 40.0% |
| ! | GACTTGTGGAACCTCATTTT+TGG | - | chr1.3:76936242-76936261 | None:intergenic | 40.0% |
| ! | GGTGTTATACGCTGTAATTG+TGG | + | chr1.3:76936346-76936365 | MS.gene056254:intron | 40.0% |
| ! | TCTTCCACATTTAAGACGGT+TGG | + | chr1.3:76936963-76936982 | MS.gene056254:CDS | 40.0% |
| ! | TTGACATTGATGGCACATTG+AGG | - | chr1.3:76936414-76936433 | None:intergenic | 40.0% |
| ! | TTTTGTGCATCTAACAACGC+CGG | - | chr1.3:76936450-76936469 | None:intergenic | 40.0% |
| !! | TTGTGGAACCTCATTTTTGG+TGG | - | chr1.3:76936239-76936258 | None:intergenic | 40.0% |
| ACTGGTAAAGATGTGGTAGC+TGG | + | chr1.3:76936148-76936167 | MS.gene056254:CDS | 45.0% | |
| ATGAGTCTACGATTCGTGAG+TGG | + | chr1.3:76937470-76937489 | MS.gene056254:CDS | 45.0% | |
| ATTCGTGAGTGGTCAAGATC+TGG | + | chr1.3:76937481-76937500 | MS.gene056254:CDS | 45.0% | |
| CGAGGTCGCAATTATCTACA+TGG | + | chr1.3:76937400-76937419 | MS.gene056254:CDS | 45.0% | |
| CTAAAGATGAGCGTGTGTTC+TGG | + | chr1.3:76937153-76937172 | MS.gene056254:CDS | 45.0% | |
| GCAATTGCAAAGCATGCTTG+CGG | + | chr1.3:76936765-76936784 | MS.gene056254:CDS | 45.0% | |
| GGTCGCAATTATCTACATGG+TGG | + | chr1.3:76937403-76937422 | MS.gene056254:CDS | 45.0% | |
| GTTCTTGCTCGAAACCTGTT+AGG | + | chr1.3:76937686-76937705 | MS.gene056254:CDS | 45.0% | |
| TAAGGCTGAAACCAACAACG+AGG | + | chr1.3:76936903-76936922 | MS.gene056254:CDS | 45.0% | |
| TATAGGAATACCTCGTCTCC+TGG | - | chr1.3:76937022-76937041 | None:intergenic | 45.0% | |
| TATGCATGTTGGCGCCAAAA+CGG | + | chr1.3:76935925-76935944 | MS.gene056254:CDS | 45.0% | |
| TGGACAAGGAATGCTACCAT+CGG | - | chr1.3:76937521-76937540 | None:intergenic | 45.0% | |
| TGTCAAAGAAATGACAGGGC+CGG | + | chr1.3:76936428-76936447 | MS.gene056254:CDS | 45.0% | |
| TTCATCCTCTGCTAAAGCTG+CGG | + | chr1.3:76936009-76936028 | MS.gene056254:CDS | 45.0% | |
| TTCGTGAGTGGTCAAGATCT+GGG | + | chr1.3:76937482-76937501 | MS.gene056254:CDS | 45.0% | |
| TTGAGAAGGAAAGAGAAGCC+AGG | + | chr1.3:76937001-76937020 | MS.gene056254:CDS | 45.0% | |
| ! | GAATGGGTTCATCTGGATCA+GGG | - | chr1.3:76935721-76935740 | None:intergenic | 45.0% |
| ! | TGATCAGGAATGGGTTCATC+TGG | - | chr1.3:76935728-76935747 | None:intergenic | 45.0% |
| ACACAACCTACGGCCAATGT+TGG | + | chr1.3:76935761-76935780 | MS.gene056254:CDS | 50.0% | |
| AGCTGAAACGTCGTCGTTGA+AGG | + | chr1.3:76935838-76935857 | MS.gene056254:CDS | 50.0% | |
| ATCCTCCAACGGTACCGTTT+CGG | - | chr1.3:76935789-76935808 | None:intergenic | 50.0% | |
| CAACTGGTGAGAAAGAGACG+CGG | + | chr1.3:76936187-76936206 | MS.gene056254:CDS | 50.0% | |
| GATGAGCGTGTGTTCTGGTA+AGG | + | chr1.3:76937158-76937177 | MS.gene056254:intron | 50.0% | |
| GGTAAAGATGTGGTAGCTGG+AGG | + | chr1.3:76936151-76936170 | MS.gene056254:CDS | 50.0% | |
| GTCGAAGGACGATGAAGGTT+CGG | + | chr1.3:76935958-76935977 | MS.gene056254:CDS | 50.0% | |
| TGAAACCAACAACGAGGAGG+AGG | + | chr1.3:76936909-76936928 | MS.gene056254:CDS | 50.0% | |
| ! | GACGATGAAGGTTCGGTTGA+AGG | + | chr1.3:76935965-76935984 | MS.gene056254:CDS | 50.0% |
| ! | GGAATGGGTTCATCTGGATC+AGG | - | chr1.3:76935722-76935741 | None:intergenic | 50.0% |
| !! | AGGGATGCAGAAGCGTTGTT+AGG | + | chr1.3:76936106-76936125 | MS.gene056254:CDS | 50.0% |
| !! | GGGATGCAGAAGCGTTGTTA+GGG | + | chr1.3:76936107-76936126 | MS.gene056254:CDS | 50.0% |
| ACGCGGCAGAAAGAGAAAGG+CGG | + | chr1.3:76936204-76936223 | MS.gene056254:CDS | 55.0% | |
| ATCCTCTGCTAAAGCTGCGG+CGG | + | chr1.3:76936012-76936031 | MS.gene056254:CDS | 55.0% | |
| CACCTAGAAGCTTCCCACCA+CGG | - | chr1.3:76937348-76937367 | None:intergenic | 55.0% | |
| CGCAGCAACAGAGGAGACAA+AGG | - | chr1.3:76937321-76937340 | None:intergenic | 55.0% | |
| CTCAACCTCCTCCTCGTTGT+TGG | - | chr1.3:76936917-76936936 | None:intergenic | 55.0% | |
| GAAACGGTACCGTTGGAGGA+TGG | + | chr1.3:76935788-76935807 | MS.gene056254:CDS | 55.0% | |
| GAAAGAGAAGCCAGGAGACG+AGG | + | chr1.3:76937009-76937028 | MS.gene056254:CDS | 55.0% | |
| GAGACGCGGCAGAAAGAGAA+AGG | + | chr1.3:76936201-76936220 | MS.gene056254:CDS | 55.0% | |
| GCGGCGGCGATAATGAAATG+CGG | + | chr1.3:76936028-76936047 | MS.gene056254:CDS | 55.0% | |
| GGCTGAAACCAACAACGAGG+AGG | + | chr1.3:76936906-76936925 | MS.gene056254:CDS | 55.0% | |
| GGGTTCATCTGGATCAGGGA+GGG | - | chr1.3:76935717-76935736 | None:intergenic | 55.0% | |
| GGTGACGTGGCACAAGCTAT+CGG | + | chr1.3:76935809-76935828 | MS.gene056254:CDS | 55.0% | |
| GTGAGTGGTCAAGATCTGGG+TGG | + | chr1.3:76937485-76937504 | MS.gene056254:CDS | 55.0% | |
| GTGGCACAAGCTATCGGTGT+TGG | + | chr1.3:76935815-76935834 | MS.gene056254:CDS | 55.0% | |
| TACCGTTTCGGCGCCAACAT+TGG | - | chr1.3:76935777-76935796 | None:intergenic | 55.0% | |
| TCGCTGTCGAAGGACGATGA+AGG | + | chr1.3:76935953-76935972 | MS.gene056254:CDS | 55.0% | |
| TGGGTTCATCTGGATCAGGG+AGG | - | chr1.3:76935718-76935737 | None:intergenic | 55.0% | |
| ! | CGATGAACGTGATGACGTGG+TGG | + | chr1.3:76935862-76935881 | MS.gene056254:CDS | 55.0% |
| ! | GGACGATGAACGTGATGACG+TGG | + | chr1.3:76935859-76935878 | MS.gene056254:CDS | 55.0% |
| ACAGCACACAGGGCATGCCT+TGG | - | chr1.3:76936738-76936757 | None:intergenic | 60.0% | |
| GCATGTTGGCGCCAAAACGG+TGG | + | chr1.3:76935928-76935947 | MS.gene056254:CDS | 60.0% | |
| GCCACGTCACCATCCTCCAA+CGG | - | chr1.3:76935800-76935819 | None:intergenic | 60.0% | |
| GGGTGGCATGCAAATGCCGA+TGG | + | chr1.3:76937502-76937521 | MS.gene056254:CDS | 60.0% | |
| ! | ACCGTTGGAGGATGGTGACG+TGG | + | chr1.3:76935796-76935815 | MS.gene056254:CDS | 60.0% |
| ! | CGACAGCGACACCACCGTTT+TGG | - | chr1.3:76935942-76935961 | None:intergenic | 60.0% |
| ! | CGTGGTGGGAAGCTTCTAGG+TGG | + | chr1.3:76937346-76937365 | MS.gene056254:CDS | 60.0% |
| ! | CTCCGTGGTGGGAAGCTTCT+AGG | + | chr1.3:76937343-76937362 | MS.gene056254:CDS | 60.0% |
| ! | GGCCAATGTTGGCGCCGAAA+CGG | + | chr1.3:76935772-76935791 | MS.gene056254:CDS | 60.0% |
| !! | AACGGTGGTGTCGCTGTCGA+AGG | + | chr1.3:76935943-76935962 | MS.gene056254:CDS | 60.0% |
| CACGGAGCTCGCAGCAACAG+AGG | - | chr1.3:76937330-76937349 | None:intergenic | 65.0% | |
| CGCCGAAACGGTACCGTTGG+AGG | + | chr1.3:76935784-76935803 | MS.gene056254:CDS | 65.0% | |
| CTCTGTTGCTGCGAGCTCCG+TGG | + | chr1.3:76937328-76937347 | MS.gene056254:CDS | 65.0% | |
| GTTGCTGCGAGCTCCGTGGT+GGG | + | chr1.3:76937332-76937351 | MS.gene056254:CDS | 65.0% | |
| TCGGCGCCAACATTGGCCGT+AGG | - | chr1.3:76935770-76935789 | None:intergenic | 65.0% | |
| TGTTGCTGCGAGCTCCGTGG+TGG | + | chr1.3:76937331-76937350 | MS.gene056254:CDS | 65.0% | |
| ! | TGGCGCCGAAACGGTACCGT+TGG | + | chr1.3:76935781-76935800 | MS.gene056254:CDS | 65.0% |
| ! | CGCCGCCGCAGCTTTAGCAG+AGG | - | chr1.3:76936017-76936036 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76935653 | 76937795 | 76935653 | ID=MS.gene056254 |
| chr1.3 | mRNA | 76935653 | 76937795 | 76935653 | ID=MS.gene056254.t1;Parent=MS.gene056254 |
| chr1.3 | exon | 76935653 | 76936297 | 76935653 | ID=MS.gene056254.t1.exon1;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76935653 | 76936297 | 76935653 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| chr1.3 | exon | 76936395 | 76936510 | 76936395 | ID=MS.gene056254.t1.exon2;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76936395 | 76936510 | 76936395 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| chr1.3 | exon | 76936706 | 76936805 | 76936706 | ID=MS.gene056254.t1.exon3;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76936706 | 76936805 | 76936706 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| chr1.3 | exon | 76936892 | 76937030 | 76936892 | ID=MS.gene056254.t1.exon4;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76936892 | 76937030 | 76936892 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| chr1.3 | exon | 76937111 | 76937174 | 76937111 | ID=MS.gene056254.t1.exon5;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76937111 | 76937174 | 76937111 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| chr1.3 | exon | 76937258 | 76937795 | 76937258 | ID=MS.gene056254.t1.exon6;Parent=MS.gene056254.t1 |
| chr1.3 | CDS | 76937258 | 76937795 | 76937258 | ID=cds.MS.gene056254.t1;Parent=MS.gene056254.t1 |
| Gene Sequence |
| Protein sequence |
