Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84419.t1 | XP_003618310.2 | 96.9 | 417 | 13 | 0 | 1 | 417 | 25 | 441 | 7.50E-240 | 839.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84419.t1 | Q8VZQ6 | 67.6 | 417 | 123 | 2 | 1 | 417 | 1 | 405 | 6.0e-169 | 595.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84419.t1 | G7KIT8 | 96.9 | 417 | 13 | 0 | 1 | 417 | 25 | 441 | 5.4e-240 | 839.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045143 | MS.gene84419 | PPI |
| MS.gene031394 | MS.gene84419 | PPI |
| MS.gene059857 | MS.gene84419 | PPI |
| MS.gene79098 | MS.gene84419 | PPI |
| MS.gene75502 | MS.gene84419 | PPI |
| MS.gene065179 | MS.gene84419 | PPI |
| MS.gene069370 | MS.gene84419 | PPI |
| MS.gene84700 | MS.gene84419 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84419.t1 | MTR_6g007490 | 96.882 | 417 | 13 | 0 | 1 | 417 | 25 | 441 | 0.0 | 842 |
| MS.gene84419.t1 | MTR_6g007490 | 96.743 | 307 | 10 | 0 | 1 | 307 | 25 | 331 | 0.0 | 625 |
| MS.gene84419.t1 | MTR_2g079700 | 64.354 | 418 | 147 | 2 | 1 | 417 | 1 | 417 | 0.0 | 565 |
| MS.gene84419.t1 | MTR_3g086910 | 47.570 | 391 | 183 | 8 | 42 | 417 | 32 | 415 | 1.03e-114 | 342 |
| MS.gene84419.t1 | MTR_3g086910 | 46.071 | 280 | 130 | 7 | 42 | 307 | 32 | 304 | 1.37e-72 | 230 |
| MS.gene84419.t1 | MTR_0040s0150 | 95.652 | 46 | 2 | 0 | 6 | 51 | 35 | 80 | 3.00e-25 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84419.t1 | AT2G20770 | 67.626 | 417 | 123 | 2 | 1 | 417 | 1 | 405 | 0.0 | 592 |
| MS.gene84419.t1 | AT1G52920 | 64.748 | 417 | 140 | 2 | 1 | 417 | 1 | 410 | 0.0 | 561 |
| MS.gene84419.t1 | AT5G65280 | 46.040 | 404 | 190 | 10 | 40 | 417 | 32 | 433 | 1.58e-113 | 339 |
| MS.gene84419.t1 | AT5G65280 | 47.756 | 312 | 147 | 6 | 120 | 417 | 2 | 311 | 4.23e-95 | 288 |
Find 118 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTATACTGTGGTCTTCT+TGG | 0.226548 | 4.1:+55988828 | MS.gene84419:CDS |
| TATGAATGTTCTTATGGATA+TGG | 0.244336 | 4.1:+55990859 | MS.gene84419:CDS |
| ATGCTGCTTCTCTTTCTTCC+AGG | 0.260657 | 4.1:+55988937 | MS.gene84419:CDS |
| GGTGCTGCGCATGGTTTGGC+TGG | 0.265944 | 4.1:+55990833 | MS.gene84419:CDS |
| CTGATGAGCTTGAGGATGTT+AGG | 0.277367 | 4.1:+55990891 | MS.gene84419:CDS |
| TTGTGACGGTGACTGCTTCT+TGG | 0.292863 | 4.1:-55988567 | None:intergenic |
| ACCTCCATGCATTTCACCTT+TGG | 0.308677 | 4.1:-55991773 | None:intergenic |
| TGGGATTATGAATGTTCTTA+TGG | 0.319356 | 4.1:+55990853 | MS.gene84419:CDS |
| CGTGCTGGTGTTTGTGCTCT+TGG | 0.319982 | 4.1:+55989496 | MS.gene84419:CDS |
| TGTTGATTCGGGTATGAATT+CGG | 0.321885 | 4.1:-55988524 | None:intergenic |
| CTTCCTGATGAGTTGCTATA+CGG | 0.322083 | 4.1:+55990523 | MS.gene84419:CDS |
| CACTGGTGCCATGGAGCTCC+TGG | 0.325907 | 4.1:+55991001 | MS.gene84419:CDS |
| CTGTCACTTTACCAACTTAC+CGG | 0.336129 | 4.1:+55991679 | MS.gene84419:CDS |
| TGGAGTTCCTGTTGGGTTGA+AGG | 0.353026 | 4.1:-55988547 | None:intergenic |
| ATGAATTCGGGCATGGGATT+GGG | 0.361724 | 4.1:-55988511 | None:intergenic |
| TGCTTCTTGGAGTTCCTGTT+GGG | 0.363023 | 4.1:-55988554 | None:intergenic |
| ATGGAAACATGGGGTTTAAC+TGG | 0.363392 | 4.1:+55988786 | MS.gene84419:CDS |
| CTGCTTCTTGGAGTTCCTGT+TGG | 0.363703 | 4.1:-55988555 | None:intergenic |
| GAACAGACTCACAGTATAAC+TGG | 0.369278 | 4.1:-55990611 | None:intergenic |
| TATGAATTCGGGCATGGGAT+TGG | 0.378818 | 4.1:-55988512 | None:intergenic |
| CTTAAACAAGCACCTTGGTC+AGG | 0.388780 | 4.1:+55990576 | MS.gene84419:CDS |
| GTTGATTCGGGTATGAATTC+GGG | 0.392509 | 4.1:-55988523 | None:intergenic |
| CTAACATCCTCAAGCTCATC+AGG | 0.402562 | 4.1:-55990890 | None:intergenic |
| GTATAAATACTTCGTGTTCC+CGG | 0.412099 | 4.1:-55991698 | None:intergenic |
| TGGAAGCAGGAGAGGTGGTT+TGG | 0.412671 | 4.1:+55991593 | MS.gene84419:CDS |
| TTGGGTTGAAGGTGTTGATT+CGG | 0.421183 | 4.1:-55988536 | None:intergenic |
| AGTGGTACGGAGAGAAGTAT+TGG | 0.422897 | 4.1:+55990810 | MS.gene84419:CDS |
| GTGGTACGGAGAGAAGTATT+GGG | 0.428107 | 4.1:+55990811 | MS.gene84419:CDS |
| TGGGTTGAAGGTGTTGATTC+GGG | 0.429203 | 4.1:-55988535 | None:intergenic |
| ATAAAGAATGGTAGGGCATT+GGG | 0.433708 | 4.1:+55990758 | MS.gene84419:CDS |
| CTACTCCTTCAAACAGTGAA+TGG | 0.433884 | 4.1:-55991804 | None:intergenic |
| TTGGGGTGCTGCGCATGGTT+TGG | 0.443842 | 4.1:+55990829 | MS.gene84419:CDS |
| GTGCTGCGCATGGTTTGGCT+GGG | 0.445559 | 4.1:+55990834 | MS.gene84419:CDS |
| AGAGCAAAGTGTTAAATCAT+TGG | 0.445589 | 4.1:-55988895 | None:intergenic |
| GAAGCAGTCACCGTCACAAC+GGG | 0.452280 | 4.1:+55988571 | MS.gene84419:CDS |
| TGATGAGCTTGAGGATGTTA+GGG | 0.452334 | 4.1:+55990892 | MS.gene84419:CDS |
| ATCAACACCTTCAACCCAAC+AGG | 0.457726 | 4.1:+55988540 | MS.gene84419:CDS |
| TACTCCTTCAAACAGTGAAT+GGG | 0.459968 | 4.1:-55991803 | None:intergenic |
| TAAGAAGCATGCAAAAGCTT+TGG | 0.465503 | 4.1:-55991725 | None:intergenic |
| ACAAGTGTGAGAGCCATTCC+AGG | 0.465693 | 4.1:-55991019 | None:intergenic |
| AATAGGGTACAGTTTCTTTG+AGG | 0.466133 | 4.1:-55988669 | None:intergenic |
| GAGGCATGGCGAGGAGGTTG+AGG | 0.470761 | 4.1:-55988606 | None:intergenic |
| CGAGTCCTTGAGATACTACT+TGG | 0.473938 | 4.1:+55989549 | MS.gene84419:CDS |
| AGAATTCTTGGATGCAGCTA+TGG | 0.482838 | 4.1:+55991573 | MS.gene84419:CDS |
| TATAAAGAATGGTAGGGCAT+TGG | 0.483268 | 4.1:+55990757 | MS.gene84419:CDS |
| CTACTTGGCTCAGTTCCAAC+AGG | 0.485928 | 4.1:+55989564 | MS.gene84419:CDS |
| AACTCATCAGGAAGATCCTT+CGG | 0.492272 | 4.1:-55990514 | None:intergenic |
| CGGTAAGTTGGTAAAGTGAC+AGG | 0.492495 | 4.1:-55991678 | None:intergenic |
| GTGCCATGGAGCTCCTGGAA+TGG | 0.496830 | 4.1:+55991006 | MS.gene84419:CDS |
| TATTCTCATAGTTCATAAGC+AGG | 0.498619 | 4.1:-55991880 | None:intergenic |
| ACTTCGTGTTCCCGGTAAGT+TGG | 0.500841 | 4.1:-55991690 | None:intergenic |
| TCGGGTATGAATTCGGGCAT+GGG | 0.510233 | 4.1:-55988517 | None:intergenic |
| TTCAGATAGTGATGGAAACA+TGG | 0.511091 | 4.1:+55988775 | MS.gene84419:intron |
| CGCGGTTTGCTCAAGCGAGT+TGG | 0.514210 | 4.1:+55991619 | MS.gene84419:CDS |
| TTCCTGATGAGTTGCTATAC+GGG | 0.519020 | 4.1:+55990524 | MS.gene84419:CDS |
| ATGCGATTATAAAGAATGGT+AGG | 0.521880 | 4.1:+55990750 | MS.gene84419:CDS |
| GGAGAGGTGGTTTGGAGTCG+CGG | 0.523187 | 4.1:+55991601 | MS.gene84419:CDS |
| CTCCCGTATAGCAACTCATC+AGG | 0.523680 | 4.1:-55990526 | None:intergenic |
| GTGGATGCGATTATAAAGAA+TGG | 0.527571 | 4.1:+55990746 | MS.gene84419:CDS |
| TTCGGGTATGAATTCGGGCA+TGG | 0.532189 | 4.1:-55988518 | None:intergenic |
| TTGGATGCAGCTATGGAAGC+AGG | 0.535125 | 4.1:+55991580 | MS.gene84419:CDS |
| AGACCCCATTCACTGTTTGA+AGG | 0.537996 | 4.1:+55991799 | MS.gene84419:CDS |
| ATGCATTCCCACTGATACCA+TGG | 0.541610 | 4.1:-55991648 | None:intergenic |
| GTTCTTGTGCACTGGTGCCA+TGG | 0.544555 | 4.1:+55990992 | MS.gene84419:CDS |
| TGAGTCACCGCCCGTTGTGA+CGG | 0.546187 | 4.1:-55988581 | None:intergenic |
| AAGTATTGGGGTGCTGCGCA+TGG | 0.553718 | 4.1:+55990824 | MS.gene84419:CDS |
| TGTTTGTGCTCTTGGTGCTG+TGG | 0.555848 | 4.1:+55989504 | MS.gene84419:CDS |
| TGTCACTTTACCAACTTACC+GGG | 0.562638 | 4.1:+55991680 | MS.gene84419:CDS |
| CGCTCAAAGAGTGGAGCATG+AGG | 0.566052 | 4.1:-55988625 | None:intergenic |
| AAGCGAGTTGGTATTTGCCA+TGG | 0.571844 | 4.1:+55991631 | MS.gene84419:CDS |
| CCTTTGATGTTTGAGTGGTA+CGG | 0.572324 | 4.1:+55990797 | MS.gene84419:CDS |
| TCAGATAGTGATGGAAACAT+GGG | 0.574239 | 4.1:+55988776 | MS.gene84419:intron |
| CACACTTGTCAAAGCAGCTA+AGG | 0.574554 | 4.1:+55991033 | MS.gene84419:CDS |
| GCAGGGAATTTAGACTGTGA+AGG | 0.577883 | 4.1:-55991862 | None:intergenic |
| CTCGCAGGATAGTTTCCACT+AGG | 0.583639 | 4.1:-55990947 | None:intergenic |
| TGCAGCTATGGAAGCAGGAG+AGG | 0.584307 | 4.1:+55991585 | MS.gene84419:CDS |
| CATTCACTGTTTGAAGGAGT+AGG | 0.584822 | 4.1:+55991805 | MS.gene84419:CDS |
| GGGAAAGAATCGATTTGACA+TGG | 0.585620 | 4.1:-55988491 | None:intergenic |
| TTAAACAAGCACCTTGGTCA+GGG | 0.585758 | 4.1:+55990577 | MS.gene84419:CDS |
| TTGTTTGTTTCAGATAGTGA+TGG | 0.589398 | 4.1:+55988767 | MS.gene84419:intron |
| GTATTTGCCATGGTATCAGT+GGG | 0.589447 | 4.1:+55991641 | MS.gene84419:CDS |
| TGCGATTATAAAGAATGGTA+GGG | 0.592376 | 4.1:+55990751 | MS.gene84419:CDS |
| GGTATTTGCCATGGTATCAG+TGG | 0.592432 | 4.1:+55991640 | MS.gene84419:CDS |
| CGTTTGAGACGCTCAAAGAG+TGG | 0.593367 | 4.1:-55988634 | None:intergenic |
| ATACATAACCGCTTTCCTAG+TGG | 0.597661 | 4.1:+55990932 | MS.gene84419:CDS |
| GAGTTGCTATACGGGAGAGG+TGG | 0.605255 | 4.1:+55990532 | MS.gene84419:CDS |
| CCGTACCACTCAAACATCAA+AGG | 0.606044 | 4.1:-55990797 | None:intergenic |
| GAGCCATTCCAGGAGCTCCA+TGG | 0.608796 | 4.1:-55991009 | None:intergenic |
| AAAGAGTGGAGCATGAGGCA+TGG | 0.609365 | 4.1:-55988620 | None:intergenic |
| AATGTCCTTTGATGTTTGAG+TGG | 0.609506 | 4.1:+55990792 | MS.gene84419:CDS |
| CTGAGCCAAGTAGTATCTCA+AGG | 0.612427 | 4.1:-55989554 | None:intergenic |
| GATGAGTTGCTATACGGGAG+AGG | 0.614709 | 4.1:+55990529 | MS.gene84419:CDS |
| ATATCCAAAGGTGAAATGCA+TGG | 0.616983 | 4.1:+55991769 | MS.gene84419:CDS |
| CATTGGTATTGCAAGTGACG+TGG | 0.617956 | 4.1:-55988878 | None:intergenic |
| AGCTATGGAAGCAGGAGAGG+TGG | 0.624432 | 4.1:+55991588 | MS.gene84419:CDS |
| GCTCATAATCTGATATCCAA+AGG | 0.624432 | 4.1:+55991757 | MS.gene84419:CDS |
| GTGGAGCATGAGGCATGGCG+AGG | 0.625084 | 4.1:-55988615 | None:intergenic |
| GATAGTTTCCACTAGGAAAG+CGG | 0.626371 | 4.1:-55990940 | None:intergenic |
| AGAGCGATGTTCTTGTGCAC+TGG | 0.628574 | 4.1:+55990984 | MS.gene84419:CDS |
| GTTTGAAGGAGTAGGATGCA+TGG | 0.629244 | 4.1:+55991813 | MS.gene84419:CDS |
| GAGCATGAGGCATGGCGAGG+AGG | 0.629695 | 4.1:-55988612 | None:intergenic |
| GGTTTAACTGGACAACATGT+TGG | 0.634315 | 4.1:+55988798 | MS.gene84419:CDS |
| AGAAGCAGTCACCGTCACAA+CGG | 0.634571 | 4.1:+55988570 | MS.gene84419:CDS |
| GCAGTCACCGTCACAACGGG+CGG | 0.635258 | 4.1:+55988574 | MS.gene84419:CDS |
| TTGTTCTTAAACAAGCACCT+TGG | 0.637354 | 4.1:+55990571 | MS.gene84419:CDS |
| AAGGAACTGTTCCCTGACCA+AGG | 0.641537 | 4.1:-55990588 | None:intergenic |
| ATTGAAGCCTGATGAGCTTG+AGG | 0.641987 | 4.1:+55990883 | MS.gene84419:CDS |
| AGACTCACAGTATAACTGGA+AGG | 0.642357 | 4.1:-55990607 | None:intergenic |
| ATTCTCATAGTTCATAAGCA+GGG | 0.648421 | 4.1:-55991879 | None:intergenic |
| CAGATAGTGATGGAAACATG+GGG | 0.649481 | 4.1:+55988777 | MS.gene84419:intron |
| TGGTACGGAGAGAAGTATTG+GGG | 0.653870 | 4.1:+55990812 | MS.gene84419:CDS |
| ACTCCTTCAAACAGTGAATG+GGG | 0.660012 | 4.1:-55991802 | None:intergenic |
| GCTGTGGCTGCAAAACATGT+TGG | 0.660846 | 4.1:+55989520 | MS.gene84419:CDS |
| GATGTAGATTAAGCTACCGA+AGG | 0.665710 | 4.1:+55990498 | MS.gene84419:intron |
| TATAATCGCATCCACTACTG+TGG | 0.682978 | 4.1:-55990738 | None:intergenic |
| GATGAGCTTGAGGATGTTAG+GGG | 0.695654 | 4.1:+55990893 | MS.gene84419:CDS |
| GGTGACTTCACTCTATACTG+TGG | 0.705407 | 4.1:+55988819 | MS.gene84419:CDS |
| TCCAAAGGTGAAATGCATGG+AGG | 0.765404 | 4.1:+55991772 | MS.gene84419:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAGAAATGATTAGT+TGG | - | chr4.1:55990428-55990447 | None:intergenic | 15.0% |
| !! | ATAAATCATCAATAATGAAA+CGG | - | chr4.1:55991197-55991216 | None:intergenic | 15.0% |
| !! | TTAAAAAAACATGTTATCAA+TGG | - | chr4.1:55991080-55991099 | None:intergenic | 15.0% |
| !!! | AATTATGGGAATTTTTTTTT+TGG | + | chr4.1:55990329-55990348 | MS.gene84419:intron | 15.0% |
| !!! | CTATATAGGTTTTTTAAAAA+AGG | - | chr4.1:55991473-55991492 | None:intergenic | 15.0% |
| !!! | CTTTTTTAAAAAACCTATAT+AGG | + | chr4.1:55991471-55991490 | MS.gene84419:intron | 15.0% |
| !!! | TTATTTTTTTTACCAAATAG+AGG | - | chr4.1:55989026-55989045 | None:intergenic | 15.0% |
| !!! | TTCATTATTGATGATTTATT+AGG | + | chr4.1:55991198-55991217 | MS.gene84419:intron | 15.0% |
| !!! | TTTTGGTTACATTTAATTAT+GGG | + | chr4.1:55990346-55990365 | MS.gene84419:intron | 15.0% |
| !!! | TTTTTGATTCAAATATTACA+CGG | + | chr4.1:55990274-55990293 | MS.gene84419:intron | 15.0% |
| !!! | TTTTTGGTTACATTTAATTA+TGG | + | chr4.1:55990345-55990364 | MS.gene84419:intron | 15.0% |
| !! | AAATTATGAAGGATCAAAAT+GGG | + | chr4.1:55989801-55989820 | MS.gene84419:intron | 20.0% |
| !! | AATCGATAAACAGTTTATAT+CGG | + | chr4.1:55989055-55989074 | MS.gene84419:intron | 20.0% |
| !! | ATAAGCACTAAACTAAAAAA+TGG | + | chr4.1:55989395-55989414 | MS.gene84419:intron | 20.0% |
| !! | TTACATTTAATTATGGGAAT+TGG | + | chr4.1:55990352-55990371 | MS.gene84419:intron | 20.0% |
| !!! | AATTTTGATTCAAGGTTTAT+GGG | + | chr4.1:55990297-55990316 | MS.gene84419:intron | 20.0% |
| !!! | AGGTTTTTTAAAAAAGGTTT+TGG | - | chr4.1:55991467-55991486 | None:intergenic | 20.0% |
| !!! | AGTCTTTGAAATTTTTACAA+GGG | + | chr4.1:55989686-55989705 | MS.gene84419:intron | 20.0% |
| !!! | ATATTTTATTAGCCTCTATT+TGG | + | chr4.1:55989011-55989030 | MS.gene84419:intron | 20.0% |
| !!! | ATGGGTTGAAATTTAATTAT+GGG | + | chr4.1:55990315-55990334 | MS.gene84419:intron | 20.0% |
| !!! | ATTGAAATATGTTTCTGTAA+TGG | + | chr4.1:55990158-55990177 | MS.gene84419:intron | 20.0% |
| !!! | ATTTTTTCCAATTAAGATCA+TGG | + | chr4.1:55989254-55989273 | MS.gene84419:intron | 20.0% |
| !!! | GGTTTTTTAAAAAAGGTTTT+GGG | - | chr4.1:55991466-55991485 | None:intergenic | 20.0% |
| !!! | TAGTCTTTGAAATTTTTACA+AGG | + | chr4.1:55989685-55989704 | MS.gene84419:intron | 20.0% |
| !!! | TATGGGTTGAAATTTAATTA+TGG | + | chr4.1:55990314-55990333 | MS.gene84419:intron | 20.0% |
| ! | AAAACGTACAATTTGACAAA+GGG | - | chr4.1:55990654-55990673 | None:intergenic | 25.0% |
| ! | AAAGTTCAAAACTACTTTAC+GGG | - | chr4.1:55989437-55989456 | None:intergenic | 25.0% |
| ! | AACAAAGATGATTCCTATAT+AGG | - | chr4.1:55991487-55991506 | None:intergenic | 25.0% |
| ! | ACTTTGAATTATTTGTTTGC+AGG | + | chr4.1:55989452-55989471 | MS.gene84419:intron | 25.0% |
| ! | AGAAGATGATATGATGAATA+GGG | - | chr4.1:55988688-55988707 | None:intergenic | 25.0% |
| ! | AGAGTTATAGATATTGAACA+AGG | - | chr4.1:55990230-55990249 | None:intergenic | 25.0% |
| ! | AGTGTAGTAAAATAATCTTG+AGG | + | chr4.1:55991434-55991453 | MS.gene84419:intron | 25.0% |
| ! | CAAAGTTCAAAACTACTTTA+CGG | - | chr4.1:55989438-55989457 | None:intergenic | 25.0% |
| ! | CATGAGAAAAAAATGTTTAG+AGG | - | chr4.1:55991235-55991254 | None:intergenic | 25.0% |
| ! | CTTTGAATTATTTGTTTGCA+GGG | + | chr4.1:55989453-55989472 | MS.gene84419:intron | 25.0% |
| ! | GAAATTATGAAGGATCAAAA+TGG | + | chr4.1:55989800-55989819 | MS.gene84419:intron | 25.0% |
| ! | GCTAGTCAAAATAAGTTATA+TGG | + | chr4.1:55989314-55989333 | MS.gene84419:intron | 25.0% |
| ! | TATGAATGTTCTTATGGATA+TGG | + | chr4.1:55990859-55990878 | MS.gene84419:CDS | 25.0% |
| ! | TGCTTCATACTATTAAGATT+GGG | + | chr4.1:55990012-55990031 | MS.gene84419:intron | 25.0% |
| ! | TTCAATATCTATAACTCTAG+TGG | + | chr4.1:55990232-55990251 | MS.gene84419:intron | 25.0% |
| !! | CAAAAAAAGCTAGCTTATAA+CGG | + | chr4.1:55989140-55989159 | MS.gene84419:intron | 25.0% |
| !! | TAATTCAACCGCTAATTTTA+TGG | - | chr4.1:55989202-55989221 | None:intergenic | 25.0% |
| !! | TTTGATGTTATTTATTGTCC+CGG | + | chr4.1:55989759-55989778 | MS.gene84419:intron | 25.0% |
| !!! | GAATTTTGATTCAAGGTTTA+TGG | + | chr4.1:55990296-55990315 | MS.gene84419:intron | 25.0% |
| !!! | GTCTTTGAAATTTTTACAAG+GGG | + | chr4.1:55989687-55989706 | MS.gene84419:intron | 25.0% |
| !!! | TTTTGGAGATAAAGAATTCT+TGG | + | chr4.1:55991561-55991580 | MS.gene84419:CDS | 25.0% |
| AAATTACCAACTTTGAACTC+TGG | - | chr4.1:55990125-55990144 | None:intergenic | 30.0% | |
| AATACTAGAAATGCATGAGA+TGG | - | chr4.1:55991285-55991304 | None:intergenic | 30.0% | |
| ACAAACAAGTGGTAAATGAA+AGG | - | chr4.1:55991515-55991534 | None:intergenic | 30.0% | |
| ACACGGTATAATACAAAACA+CGG | - | chr4.1:55988971-55988990 | None:intergenic | 30.0% | |
| ATGCGATTATAAAGAATGGT+AGG | + | chr4.1:55990750-55990769 | MS.gene84419:CDS | 30.0% | |
| CAAAACGTACAATTTGACAA+AGG | - | chr4.1:55990655-55990674 | None:intergenic | 30.0% | |
| CAAACAAGTGGTAAATGAAA+GGG | - | chr4.1:55991514-55991533 | None:intergenic | 30.0% | |
| CAAAGGGAAAAATAAAGAGT+TGG | - | chr4.1:55990638-55990657 | None:intergenic | 30.0% | |
| CTATAACTCTAGTGGTTTAT+GGG | + | chr4.1:55990240-55990259 | MS.gene84419:intron | 30.0% | |
| GAGAAGATGATATGATGAAT+AGG | - | chr4.1:55988689-55988708 | None:intergenic | 30.0% | |
| GATAAAATCTCCACATAATC+TGG | + | chr4.1:55991100-55991119 | MS.gene84419:intron | 30.0% | |
| GTAATTGAATGTAATCGTGT+CGG | - | chr4.1:55989922-55989941 | None:intergenic | 30.0% | |
| GTAGTGTTCCATAAAATTAG+CGG | + | chr4.1:55989191-55989210 | MS.gene84419:intron | 30.0% | |
| GTCCCTGTATGAAAATATAA+GGG | + | chr4.1:55989731-55989750 | MS.gene84419:intron | 30.0% | |
| GTGCTTCATACTATTAAGAT+TGG | + | chr4.1:55990011-55990030 | MS.gene84419:intron | 30.0% | |
| TACCACTTGTTTGTAACTTT+AGG | + | chr4.1:55991521-55991540 | MS.gene84419:intron | 30.0% | |
| TCTATAACTCTAGTGGTTTA+TGG | + | chr4.1:55990239-55990258 | MS.gene84419:intron | 30.0% | |
| TGCGATTATAAAGAATGGTA+GGG | + | chr4.1:55990751-55990770 | MS.gene84419:CDS | 30.0% | |
| TGGGATTATGAATGTTCTTA+TGG | + | chr4.1:55990853-55990872 | MS.gene84419:CDS | 30.0% | |
| TGTCCCTGTATGAAAATATA+AGG | + | chr4.1:55989730-55989749 | MS.gene84419:intron | 30.0% | |
| TTATGCGCAATATCAAGAAT+TGG | - | chr4.1:55991364-55991383 | None:intergenic | 30.0% | |
| TTCCTAAAGTTACAAACAAG+TGG | - | chr4.1:55991526-55991545 | None:intergenic | 30.0% | |
| TTGACTAAAAAAGACTCGTT+TGG | - | chr4.1:55989360-55989379 | None:intergenic | 30.0% | |
| TTGTCATACAAATAGCATCA+AGG | + | chr4.1:55991310-55991329 | MS.gene84419:intron | 30.0% | |
| TTGTTTGTTTCAGATAGTGA+TGG | + | chr4.1:55988767-55988786 | MS.gene84419:intron | 30.0% | |
| TTTAGCACCATGATCTTAAT+TGG | - | chr4.1:55989264-55989283 | None:intergenic | 30.0% | |
| ! | AAAAACAATCCTCAGGTTTT+TGG | + | chr4.1:55991544-55991563 | MS.gene84419:intron | 30.0% |
| ! | AGAGCAAAGTGTTAAATCAT+TGG | - | chr4.1:55988898-55988917 | None:intergenic | 30.0% |
| ! | AGTCCCTTATATTTTCATAC+AGG | - | chr4.1:55989737-55989756 | None:intergenic | 30.0% |
| ! | GGAACAAGGTTTTTAAATCA+TGG | + | chr4.1:55991331-55991350 | MS.gene84419:intron | 30.0% |
| ! | GTCCCTTATATTTTCATACA+GGG | - | chr4.1:55989736-55989755 | None:intergenic | 30.0% |
| ! | GTTGATAAGCTAGCTTATAA+CGG | + | chr4.1:55989107-55989126 | MS.gene84419:intron | 30.0% |
| ! | TGTACGTTTTGCATTGAATT+GGG | + | chr4.1:55990664-55990683 | MS.gene84419:intron | 30.0% |
| ! | TTGTACGTTTTGCATTGAAT+TGG | + | chr4.1:55990663-55990682 | MS.gene84419:intron | 30.0% |
| !! | CTTCATTGCATTTGTTGTTT+AGG | + | chr4.1:55991153-55991172 | MS.gene84419:intron | 30.0% |
| !! | GTGTTTCTGAATTTGTTTTC+AGG | + | chr4.1:55990715-55990734 | MS.gene84419:intron | 30.0% |
| !!! | GCTAGCTTTTTTTGTTTTGA+AGG | - | chr4.1:55989134-55989153 | None:intergenic | 30.0% |
| !!! | TTACACGGAATTTTGATTCA+AGG | + | chr4.1:55990289-55990308 | MS.gene84419:intron | 30.0% |
| AATAGGGTACAGTTTCTTTG+AGG | - | chr4.1:55988672-55988691 | None:intergenic | 35.0% | |
| AATGTCCTTTGATGTTTGAG+TGG | + | chr4.1:55990792-55990811 | MS.gene84419:CDS | 35.0% | |
| ACAAATAGCATCAAGGAACA+AGG | + | chr4.1:55991317-55991336 | MS.gene84419:intron | 35.0% | |
| ATATCCAAAGGTGAAATGCA+TGG | + | chr4.1:55991769-55991788 | MS.gene84419:CDS | 35.0% | |
| ATATGGTCATCAGAAAGTGA+CGG | + | chr4.1:55989331-55989350 | MS.gene84419:intron | 35.0% | |
| GCTCATAATCTGATATCCAA+AGG | + | chr4.1:55991757-55991776 | MS.gene84419:CDS | 35.0% | |
| GGTAAACTACCGTTATGATT+TGG | - | chr4.1:55990407-55990426 | None:intergenic | 35.0% | |
| GTAAAATAATCTTGAGGCCA+AGG | + | chr4.1:55991440-55991459 | MS.gene84419:intron | 35.0% | |
| GTATAAATACTTCGTGTTCC+CGG | - | chr4.1:55991701-55991720 | None:intergenic | 35.0% | |
| GTGGATGCGATTATAAAGAA+TGG | + | chr4.1:55990746-55990765 | MS.gene84419:CDS | 35.0% | |
| TACTCCTTCAAACAGTGAAT+GGG | - | chr4.1:55991806-55991825 | None:intergenic | 35.0% | |
| TATAAAGAATGGTAGGGCAT+TGG | + | chr4.1:55990757-55990776 | MS.gene84419:CDS | 35.0% | |
| TATGAAATTGAAATCACCCC+AGG | + | chr4.1:55990379-55990398 | MS.gene84419:intron | 35.0% | |
| TATGTAGATTGAGAGTCACA+TGG | + | chr4.1:55989868-55989887 | MS.gene84419:intron | 35.0% | |
| TCTGCTTTCAATATCTTGTC+CGG | + | chr4.1:55989976-55989995 | MS.gene84419:intron | 35.0% | |
| TCTTTATCTCCAAAAACCTG+AGG | - | chr4.1:55991556-55991575 | None:intergenic | 35.0% | |
| TTATTGTCCCGGATTGAATT+GGG | + | chr4.1:55989770-55989789 | MS.gene84419:intron | 35.0% | |
| TTGTTCTTAAACAAGCACCT+TGG | + | chr4.1:55990571-55990590 | MS.gene84419:CDS | 35.0% | |
| TTTATTGTCCCGGATTGAAT+TGG | + | chr4.1:55989769-55989788 | MS.gene84419:intron | 35.0% | |
| ! | AAAGACTGTATTGATCTGCA+AGG | - | chr4.1:55989644-55989663 | None:intergenic | 35.0% |
| ! | ATAAAGAATGGTAGGGCATT+GGG | + | chr4.1:55990758-55990777 | MS.gene84419:CDS | 35.0% |
| ! | ATGCATGGCTTATCTCTTTT+TGG | + | chr4.1:55991828-55991847 | MS.gene84419:CDS | 35.0% |
| ! | CTTTAGGAAAAACAATCCTC+AGG | + | chr4.1:55991537-55991556 | MS.gene84419:intron | 35.0% |
| ! | TAAGAAGCATGCAAAAGCTT+TGG | - | chr4.1:55991728-55991747 | None:intergenic | 35.0% |
| ! | TCAGATAGTGATGGAAACAT+GGG | + | chr4.1:55988776-55988795 | MS.gene84419:intron | 35.0% |
| ! | TTCAGATAGTGATGGAAACA+TGG | + | chr4.1:55988775-55988794 | MS.gene84419:intron | 35.0% |
| ! | TTTTCTATCTGACACGTGTT+TGG | + | chr4.1:55989893-55989912 | MS.gene84419:intron | 35.0% |
| !! | AGGGATGTGACTTTTATTTG+TGG | + | chr4.1:55989472-55989491 | MS.gene84419:intron | 35.0% |
| !! | CATTGCATTTGTTGTTTAGG+TGG | + | chr4.1:55991156-55991175 | MS.gene84419:intron | 35.0% |
| !! | TGTTGATTCGGGTATGAATT+CGG | - | chr4.1:55988527-55988546 | None:intergenic | 35.0% |
| !! | TTCTTATCTTTTTCACTCGC+AGG | - | chr4.1:55990965-55990984 | None:intergenic | 35.0% |
| !!! | TTAAAAAAGGTTTTGGGCCT+TGG | - | chr4.1:55991460-55991479 | None:intergenic | 35.0% |
| AAATAAGCCACATTTGACCG+TGG | - | chr4.1:55991387-55991406 | None:intergenic | 40.0% | |
| AACTCATCAGGAAGATCCTT+CGG | - | chr4.1:55990517-55990536 | None:intergenic | 40.0% | |
| ACGGTCAAATGTGGCTTATT+TGG | + | chr4.1:55991386-55991405 | MS.gene84419:intron | 40.0% | |
| ACTCCTTCAAACAGTGAATG+GGG | - | chr4.1:55991805-55991824 | None:intergenic | 40.0% | |
| ACTCTATACTGTGGTCTTCT+TGG | + | chr4.1:55988828-55988847 | MS.gene84419:CDS | 40.0% | |
| AGAATTCTTGGATGCAGCTA+TGG | + | chr4.1:55991573-55991592 | MS.gene84419:CDS | 40.0% | |
| AGACTCACAGTATAACTGGA+AGG | - | chr4.1:55990610-55990629 | None:intergenic | 40.0% | |
| AGTCACATTGCAATACCTGT+TGG | - | chr4.1:55989582-55989601 | None:intergenic | 40.0% | |
| ATACATAACCGCTTTCCTAG+TGG | + | chr4.1:55990932-55990951 | MS.gene84419:CDS | 40.0% | |
| ATCTACATCCCACGACAATA+AGG | - | chr4.1:55990487-55990506 | None:intergenic | 40.0% | |
| ATGGAAACATGGGGTTTAAC+TGG | + | chr4.1:55988786-55988805 | MS.gene84419:CDS | 40.0% | |
| CACCAAATAGAGACACAACA+CGG | - | chr4.1:55988988-55989007 | None:intergenic | 40.0% | |
| CATTCACTGTTTGAAGGAGT+AGG | + | chr4.1:55991805-55991824 | MS.gene84419:CDS | 40.0% | |
| CCTTTGATGTTTGAGTGGTA+CGG | + | chr4.1:55990797-55990816 | MS.gene84419:CDS | 40.0% | |
| CTACTCCTTCAAACAGTGAA+TGG | - | chr4.1:55991807-55991826 | None:intergenic | 40.0% | |
| CTGCTTTCAATATCTTGTCC+GGG | + | chr4.1:55989977-55989996 | MS.gene84419:intron | 40.0% | |
| CTTCCTGATGAGTTGCTATA+CGG | + | chr4.1:55990523-55990542 | MS.gene84419:CDS | 40.0% | |
| CTTGATATTGCGCATAACCA+CGG | + | chr4.1:55991367-55991386 | MS.gene84419:intron | 40.0% | |
| GAACAGACTCACAGTATAAC+TGG | - | chr4.1:55990614-55990633 | None:intergenic | 40.0% | |
| GATAGTTTCCACTAGGAAAG+CGG | - | chr4.1:55990943-55990962 | None:intergenic | 40.0% | |
| GATCTGCAAGGAAATTGCAA+AGG | - | chr4.1:55989632-55989651 | None:intergenic | 40.0% | |
| GATGTAGATTAAGCTACCGA+AGG | + | chr4.1:55990498-55990517 | MS.gene84419:intron | 40.0% | |
| GGTTTAACTGGACAACATGT+TGG | + | chr4.1:55988798-55988817 | MS.gene84419:CDS | 40.0% | |
| GTATTTGCCATGGTATCAGT+GGG | + | chr4.1:55991641-55991660 | MS.gene84419:CDS | 40.0% | |
| TACCGTGTTGTGTCTCTATT+TGG | + | chr4.1:55988983-55989002 | MS.gene84419:intron | 40.0% | |
| TATAATCGCATCCACTACTG+TGG | - | chr4.1:55990741-55990760 | None:intergenic | 40.0% | |
| TGATGAGCTTGAGGATGTTA+GGG | + | chr4.1:55990892-55990911 | MS.gene84419:CDS | 40.0% | |
| TTAAACAAGCACCTTGGTCA+GGG | + | chr4.1:55990577-55990596 | MS.gene84419:CDS | 40.0% | |
| TTCCTGATGAGTTGCTATAC+GGG | + | chr4.1:55990524-55990543 | MS.gene84419:CDS | 40.0% | |
| TTGAACAAGGTCACGCATTA+AGG | - | chr4.1:55990217-55990236 | None:intergenic | 40.0% | |
| ! | CAGATAGTGATGGAAACATG+GGG | + | chr4.1:55988777-55988796 | MS.gene84419:intron | 40.0% |
| ! | GGCTTATCTCTTTTTGGACA+TGG | + | chr4.1:55991834-55991853 | MS.gene84419:CDS | 40.0% |
| !! | AAAGACTTGTTAGACGTGTG+TGG | - | chr4.1:55988727-55988746 | None:intergenic | 40.0% |
| !! | ACCGTTATGATTTGGTTCCT+GGG | - | chr4.1:55990399-55990418 | None:intergenic | 40.0% |
| !! | ACTACTTTACGGGTCTTGTT+TGG | - | chr4.1:55989427-55989446 | None:intergenic | 40.0% |
| !! | ACTTTTATTTGTGGACGTGC+TGG | + | chr4.1:55989481-55989500 | MS.gene84419:CDS | 40.0% |
| !! | CTGTCACTTTACCAACTTAC+CGG | + | chr4.1:55991679-55991698 | MS.gene84419:CDS | 40.0% |
| !! | GTTGATTCGGGTATGAATTC+GGG | - | chr4.1:55988526-55988545 | None:intergenic | 40.0% |
| !! | TACCGTTATGATTTGGTTCC+TGG | - | chr4.1:55990400-55990419 | None:intergenic | 40.0% |
| !! | TGACTAAGCCTTATTGTCGT+GGG | + | chr4.1:55990476-55990495 | MS.gene84419:intron | 40.0% |
| !! | TGTCACTTTACCAACTTACC+GGG | + | chr4.1:55991680-55991699 | MS.gene84419:CDS | 40.0% |
| !! | TTGACTAAGCCTTATTGTCG+TGG | + | chr4.1:55990475-55990494 | MS.gene84419:intron | 40.0% |
| !! | TTGGGTTGAAGGTGTTGATT+CGG | - | chr4.1:55988539-55988558 | None:intergenic | 40.0% |
| ACCTCCATGCATTTCACCTT+TGG | - | chr4.1:55991776-55991795 | None:intergenic | 45.0% | |
| AGACCCCATTCACTGTTTGA+AGG | + | chr4.1:55991799-55991818 | MS.gene84419:CDS | 45.0% | |
| ATCAACACCTTCAACCCAAC+AGG | + | chr4.1:55988540-55988559 | MS.gene84419:CDS | 45.0% | |
| ATGAATTCGGGCATGGGATT+GGG | - | chr4.1:55988514-55988533 | None:intergenic | 45.0% | |
| ATGCATTCCCACTGATACCA+TGG | - | chr4.1:55991651-55991670 | None:intergenic | 45.0% | |
| ATTGAAGCCTGATGAGCTTG+AGG | + | chr4.1:55990883-55990902 | MS.gene84419:CDS | 45.0% | |
| CAAAACACGGTGAATGAACC+TGG | - | chr4.1:55988958-55988977 | None:intergenic | 45.0% | |
| CACACTTGTCAAAGCAGCTA+AGG | + | chr4.1:55991033-55991052 | MS.gene84419:CDS | 45.0% | |
| CATTGGTATTGCAAGTGACG+TGG | - | chr4.1:55988881-55988900 | None:intergenic | 45.0% | |
| CCCCAGGAACCAAATCATAA+CGG | + | chr4.1:55990395-55990414 | MS.gene84419:intron | 45.0% | |
| CCGTACCACTCAAACATCAA+AGG | - | chr4.1:55990800-55990819 | None:intergenic | 45.0% | |
| CGAAATTGTGCTCTCAATCG+TGG | + | chr4.1:55991410-55991429 | MS.gene84419:intron | 45.0% | |
| CGAGTCCTTGAGATACTACT+TGG | + | chr4.1:55989549-55989568 | MS.gene84419:CDS | 45.0% | |
| CGTGTTGTGTCTCTATTTGG+TGG | + | chr4.1:55988986-55989005 | MS.gene84419:intron | 45.0% | |
| CTAACATCCTCAAGCTCATC+AGG | - | chr4.1:55990893-55990912 | None:intergenic | 45.0% | |
| CTGAGCCAAGTAGTATCTCA+AGG | - | chr4.1:55989557-55989576 | None:intergenic | 45.0% | |
| CTGATGAGCTTGAGGATGTT+AGG | + | chr4.1:55990891-55990910 | MS.gene84419:CDS | 45.0% | |
| CTTAAACAAGCACCTTGGTC+AGG | + | chr4.1:55990576-55990595 | MS.gene84419:CDS | 45.0% | |
| GATGAGCTTGAGGATGTTAG+GGG | + | chr4.1:55990893-55990912 | MS.gene84419:CDS | 45.0% | |
| GCAGGGAATTTAGACTGTGA+AGG | - | chr4.1:55991865-55991884 | None:intergenic | 45.0% | |
| GCTTAGTCAAGCTAGTTGAG+CGG | - | chr4.1:55990465-55990484 | None:intergenic | 45.0% | |
| GGGCTGCAAGGAAATTATGA+AGG | + | chr4.1:55989790-55989809 | MS.gene84419:intron | 45.0% | |
| GGTATTTGCCATGGTATCAG+TGG | + | chr4.1:55991640-55991659 | MS.gene84419:CDS | 45.0% | |
| GGTGACTTCACTCTATACTG+TGG | + | chr4.1:55988819-55988838 | MS.gene84419:CDS | 45.0% | |
| GTTTGAAGGAGTAGGATGCA+TGG | + | chr4.1:55991813-55991832 | MS.gene84419:CDS | 45.0% | |
| TATGAATTCGGGCATGGGAT+TGG | - | chr4.1:55988515-55988534 | None:intergenic | 45.0% | |
| TCCAAAGGTGAAATGCATGG+AGG | + | chr4.1:55991772-55991791 | MS.gene84419:CDS | 45.0% | |
| TGATCTCGATCGCATGGTTA+TGG | + | chr4.1:55990187-55990206 | MS.gene84419:intron | 45.0% | |
| TGCTTCTTGGAGTTCCTGTT+GGG | - | chr4.1:55988557-55988576 | None:intergenic | 45.0% | |
| TTGCAACTCGCCAGATTATG+TGG | - | chr4.1:55991113-55991132 | None:intergenic | 45.0% | |
| ! | AGTGGTACGGAGAGAAGTAT+TGG | + | chr4.1:55990810-55990829 | MS.gene84419:CDS | 45.0% |
| ! | ATGCTGCTTCTCTTTCTTCC+AGG | + | chr4.1:55988937-55988956 | MS.gene84419:CDS | 45.0% |
| !! | AAGCGAGTTGGTATTTGCCA+TGG | + | chr4.1:55991631-55991650 | MS.gene84419:CDS | 45.0% |
| !! | CCGTTATGATTTGGTTCCTG+GGG | - | chr4.1:55990398-55990417 | None:intergenic | 45.0% |
| !! | CGGTAAGTTGGTAAAGTGAC+AGG | - | chr4.1:55991681-55991700 | None:intergenic | 45.0% |
| !! | GTGGTACGGAGAGAAGTATT+GGG | + | chr4.1:55990811-55990830 | MS.gene84419:CDS | 45.0% |
| !! | TGGGTTGAAGGTGTTGATTC+GGG | - | chr4.1:55988538-55988557 | None:intergenic | 45.0% |
| !! | TGGTACGGAGAGAAGTATTG+GGG | + | chr4.1:55990812-55990831 | MS.gene84419:CDS | 45.0% |
| !! | TTGTTTTCAGGCCACAGTAG+TGG | + | chr4.1:55990727-55990746 | MS.gene84419:intron | 45.0% |
| !!! | ACGGGAGAGGTGGTTTTTTA+TGG | + | chr4.1:55990542-55990561 | MS.gene84419:CDS | 45.0% |
| !!! | CGGGAGAGGTGGTTTTTTAT+GGG | + | chr4.1:55990543-55990562 | MS.gene84419:CDS | 45.0% |
| AAAGAGTGGAGCATGAGGCA+TGG | - | chr4.1:55988623-55988642 | None:intergenic | 50.0% | |
| AAGGAACTGTTCCCTGACCA+AGG | - | chr4.1:55990591-55990610 | None:intergenic | 50.0% | |
| ACAAGTGTGAGAGCCATTCC+AGG | - | chr4.1:55991022-55991041 | None:intergenic | 50.0% | |
| ACCATGCGATCGAGATCAGA+CGG | - | chr4.1:55990185-55990204 | None:intergenic | 50.0% | |
| ACTTCGTGTTCCCGGTAAGT+TGG | - | chr4.1:55991693-55991712 | None:intergenic | 50.0% | |
| AGAAGCAGTCACCGTCACAA+CGG | + | chr4.1:55988570-55988589 | MS.gene84419:CDS | 50.0% | |
| AGAGCGATGTTCTTGTGCAC+TGG | + | chr4.1:55990984-55991003 | MS.gene84419:CDS | 50.0% | |
| CCTTGCAGCCCAATTCAATC+CGG | - | chr4.1:55989781-55989800 | None:intergenic | 50.0% | |
| CGCATAACCACGGTCAAATG+TGG | + | chr4.1:55991377-55991396 | MS.gene84419:intron | 50.0% | |
| CGTGACAAATCAATGACGCC+TGG | - | chr4.1:55990077-55990096 | None:intergenic | 50.0% | |
| CTACTTGGCTCAGTTCCAAC+AGG | + | chr4.1:55989564-55989583 | MS.gene84419:CDS | 50.0% | |
| CTCCCGTATAGCAACTCATC+AGG | - | chr4.1:55990529-55990548 | None:intergenic | 50.0% | |
| CTCGCAGGATAGTTTCCACT+AGG | - | chr4.1:55990950-55990969 | None:intergenic | 50.0% | |
| CTGCTTCTTGGAGTTCCTGT+TGG | - | chr4.1:55988558-55988577 | None:intergenic | 50.0% | |
| CTTGCAGCCCAATTCAATCC+GGG | - | chr4.1:55989780-55989799 | None:intergenic | 50.0% | |
| GACGGTCCAGAGTTCAAAGT+TGG | + | chr4.1:55990116-55990135 | MS.gene84419:intron | 50.0% | |
| GATGAGTTGCTATACGGGAG+AGG | + | chr4.1:55990529-55990548 | MS.gene84419:CDS | 50.0% | |
| GCTGTGGCTGCAAAACATGT+TGG | + | chr4.1:55989520-55989539 | MS.gene84419:CDS | 50.0% | |
| GTTGCAGAATTGATGCAGCC+AGG | + | chr4.1:55990056-55990075 | MS.gene84419:intron | 50.0% | |
| TAGTCAAGCTAGTTGAGCGG+TGG | - | chr4.1:55990462-55990481 | None:intergenic | 50.0% | |
| TCGGGTATGAATTCGGGCAT+GGG | - | chr4.1:55988520-55988539 | None:intergenic | 50.0% | |
| TGAACTCTGGACCGTCTGAT+CGG | - | chr4.1:55990112-55990131 | None:intergenic | 50.0% | |
| TTCGGGTATGAATTCGGGCA+TGG | - | chr4.1:55988521-55988540 | None:intergenic | 50.0% | |
| TTGGATGCAGCTATGGAAGC+AGG | + | chr4.1:55991580-55991599 | MS.gene84419:CDS | 50.0% | |
| TTGTGACGGTGACTGCTTCT+TGG | - | chr4.1:55988570-55988589 | None:intergenic | 50.0% | |
| ! | CGTTTGAGACGCTCAAAGAG+TGG | - | chr4.1:55988637-55988656 | None:intergenic | 50.0% |
| !! | TGGAGTTCCTGTTGGGTTGA+AGG | - | chr4.1:55988550-55988569 | None:intergenic | 50.0% |
| !! | TGTTTGTGCTCTTGGTGCTG+TGG | + | chr4.1:55989504-55989523 | MS.gene84419:CDS | 50.0% |
| ACCGTCTGATCTCGATCGCA+TGG | + | chr4.1:55990181-55990200 | MS.gene84419:intron | 55.0% | |
| AGCTATGGAAGCAGGAGAGG+TGG | + | chr4.1:55991588-55991607 | MS.gene84419:CDS | 55.0% | |
| CCGGATTGAATTGGGCTGCA+AGG | + | chr4.1:55989778-55989797 | MS.gene84419:intron | 55.0% | |
| CGCTCAAAGAGTGGAGCATG+AGG | - | chr4.1:55988628-55988647 | None:intergenic | 55.0% | |
| CTGGACCGTCTGATCGGAAT+CGG | - | chr4.1:55990106-55990125 | None:intergenic | 55.0% | |
| GAAGCACAGACACTAACGCC+CGG | - | chr4.1:55989998-55990017 | None:intergenic | 55.0% | |
| GAAGCAGTCACCGTCACAAC+GGG | + | chr4.1:55988571-55988590 | MS.gene84419:CDS | 55.0% | |
| GACGTCCGATTCCGATCAGA+CGG | + | chr4.1:55990098-55990117 | MS.gene84419:intron | 55.0% | |
| GAGTTGCTATACGGGAGAGG+TGG | + | chr4.1:55990532-55990551 | MS.gene84419:CDS | 55.0% | |
| GCAACTGCATGCAGTCTGCA+TGG | - | chr4.1:55990041-55990060 | None:intergenic | 55.0% | |
| TGCAGCTATGGAAGCAGGAG+AGG | + | chr4.1:55991585-55991604 | MS.gene84419:CDS | 55.0% | |
| TGGAAGCAGGAGAGGTGGTT+TGG | + | chr4.1:55991593-55991612 | MS.gene84419:CDS | 55.0% | |
| ! | CGTGCTGGTGTTTGTGCTCT+TGG | + | chr4.1:55989496-55989515 | MS.gene84419:CDS | 55.0% |
| ! | GTTCTTGTGCACTGGTGCCA+TGG | + | chr4.1:55990992-55991011 | MS.gene84419:CDS | 55.0% |
| !! | AAGTATTGGGGTGCTGCGCA+TGG | + | chr4.1:55990824-55990843 | MS.gene84419:CDS | 55.0% |
| GAGCCATTCCAGGAGCTCCA+TGG | - | chr4.1:55991012-55991031 | None:intergenic | 60.0% | |
| GTGCCATGGAGCTCCTGGAA+TGG | + | chr4.1:55991006-55991025 | MS.gene84419:CDS | 60.0% | |
| TGAGTCACCGCCCGTTGTGA+CGG | - | chr4.1:55988584-55988603 | None:intergenic | 60.0% | |
| ! | CGCGGTTTGCTCAAGCGAGT+TGG | + | chr4.1:55991619-55991638 | MS.gene84419:CDS | 60.0% |
| ! | GGAGAGGTGGTTTGGAGTCG+CGG | + | chr4.1:55991601-55991620 | MS.gene84419:CDS | 60.0% |
| ! | GTGCTGCGCATGGTTTGGCT+GGG | + | chr4.1:55990834-55990853 | MS.gene84419:CDS | 60.0% |
| !! | TTGGGGTGCTGCGCATGGTT+TGG | + | chr4.1:55990829-55990848 | MS.gene84419:CDS | 60.0% |
| GAGCATGAGGCATGGCGAGG+AGG | - | chr4.1:55988615-55988634 | None:intergenic | 65.0% | |
| GAGGCATGGCGAGGAGGTTG+AGG | - | chr4.1:55988609-55988628 | None:intergenic | 65.0% | |
| GCAGTCACCGTCACAACGGG+CGG | + | chr4.1:55988574-55988593 | MS.gene84419:CDS | 65.0% | |
| GTGGAGCATGAGGCATGGCG+AGG | - | chr4.1:55988618-55988637 | None:intergenic | 65.0% | |
| ! | GGTGCTGCGCATGGTTTGGC+TGG | + | chr4.1:55990833-55990852 | MS.gene84419:CDS | 65.0% |
| !! | CACTGGTGCCATGGAGCTCC+TGG | + | chr4.1:55991001-55991020 | MS.gene84419:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 55988493 | 55991897 | 55988493 | ID=MS.gene84419 |
| chr4.1 | mRNA | 55988493 | 55991897 | 55988493 | ID=MS.gene84419.t1;Parent=MS.gene84419 |
| chr4.1 | exon | 55988493 | 55988681 | 55988493 | ID=MS.gene84419.t1.exon1;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55988493 | 55988681 | 55988493 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| chr4.1 | exon | 55988780 | 55988958 | 55988780 | ID=MS.gene84419.t1.exon2;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55988780 | 55988958 | 55988780 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| chr4.1 | exon | 55989474 | 55989585 | 55989474 | ID=MS.gene84419.t1.exon3;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55989474 | 55989585 | 55989474 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| chr4.1 | exon | 55990505 | 55990621 | 55990505 | ID=MS.gene84419.t1.exon4;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55990505 | 55990621 | 55990505 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| chr4.1 | exon | 55990737 | 55991054 | 55990737 | ID=MS.gene84419.t1.exon5;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55990737 | 55991054 | 55990737 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| chr4.1 | exon | 55991559 | 55991897 | 55991559 | ID=MS.gene84419.t1.exon6;Parent=MS.gene84419.t1 |
| chr4.1 | CDS | 55991559 | 55991897 | 55991559 | ID=cds.MS.gene84419.t1;Parent=MS.gene84419.t1 |
| Gene Sequence |
| Protein sequence |
