Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85897.t1 | XP_003613950.2 | 95.5 | 334 | 15 | 0 | 1 | 334 | 1 | 334 | 7.00E-180 | 639.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85897.t1 | F4I241 | 53.4 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 7.3e-93 | 342.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85897.t1 | G7JWN6 | 95.5 | 334 | 15 | 0 | 1 | 334 | 1 | 334 | 5.1e-180 | 639.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40528 | MS.gene85897 | PPI |
| MS.gene90774 | MS.gene85897 | PPI |
| MS.gene048337 | MS.gene85897 | PPI |
| MS.gene046944 | MS.gene85897 | PPI |
| MS.gene008905 | MS.gene85897 | PPI |
| MS.gene065201 | MS.gene85897 | PPI |
| MS.gene024963 | MS.gene85897 | PPI |
| MS.gene92360 | MS.gene85897 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85897.t1 | MTR_5g043000 | 95.509 | 334 | 15 | 0 | 1 | 334 | 1 | 334 | 0.0 | 642 |
| MS.gene85897.t1 | MTR_5g005120 | 37.037 | 324 | 196 | 5 | 8 | 325 | 11 | 332 | 2.58e-69 | 220 |
| MS.gene85897.t1 | MTR_7g033060 | 86.765 | 68 | 9 | 0 | 12 | 79 | 25 | 92 | 5.30e-32 | 115 |
| MS.gene85897.t1 | MTR_8g068875 | 27.273 | 319 | 217 | 7 | 2 | 312 | 8 | 319 | 3.97e-29 | 115 |
| MS.gene85897.t1 | MTR_2g008410 | 27.134 | 328 | 209 | 13 | 9 | 318 | 17 | 332 | 3.19e-28 | 112 |
| MS.gene85897.t1 | MTR_1g492860 | 25.664 | 339 | 233 | 8 | 8 | 334 | 12 | 343 | 5.72e-25 | 103 |
| MS.gene85897.t1 | MTR_2g008410 | 26.006 | 323 | 201 | 11 | 9 | 318 | 17 | 314 | 1.12e-24 | 102 |
| MS.gene85897.t1 | MTR_2g008410 | 27.376 | 263 | 168 | 11 | 67 | 318 | 17 | 267 | 7.13e-20 | 88.6 |
| MS.gene85897.t1 | MTR_2g008410 | 25.969 | 258 | 160 | 9 | 67 | 318 | 17 | 249 | 2.42e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85897.t1 | AT1G69400 | 53.443 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 2.00e-115 | 337 |
| MS.gene85897.t1 | AT1G49910 | 38.006 | 321 | 191 | 5 | 11 | 325 | 9 | 327 | 1.57e-74 | 233 |
| MS.gene85897.t1 | AT1G69400 | 49.569 | 232 | 116 | 1 | 16 | 247 | 11 | 241 | 1.99e-74 | 231 |
| MS.gene85897.t1 | AT3G19590 | 38.037 | 326 | 194 | 6 | 6 | 325 | 5 | 328 | 9.09e-73 | 229 |
| MS.gene85897.t1 | AT1G80670 | 27.439 | 328 | 219 | 9 | 3 | 318 | 10 | 330 | 3.47e-31 | 120 |
Find 73 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGACCATCCTTTGATTT+TGG | 0.181469 | 5.3:+30666695 | None:intergenic |
| GAATCTTCGTTTATACGATT+TGG | 0.245023 | 5.3:-30670240 | MS.gene85897:CDS |
| GGATGGACGGGTTGCGTTGC+AGG | 0.250415 | 5.3:-30667436 | MS.gene85897:CDS |
| GCAGGTCTATTAATTACTTC+TGG | 0.255854 | 5.3:-30668293 | MS.gene85897:intron |
| CATGTCTGTCTCGGGGTTTA+AGG | 0.264299 | 5.3:-30668186 | MS.gene85897:CDS |
| AATTGACAATTTCTTTGATT+TGG | 0.265880 | 5.3:+30670437 | None:intergenic |
| TATAGGTATGACTTGCATTC+TGG | 0.273951 | 5.3:-30669319 | MS.gene85897:intron |
| ATTAGGCGCAAATTGAATTC+TGG | 0.291516 | 5.3:+30670395 | None:intergenic |
| ATGAGAAGGTTGTTAGAATT+AGG | 0.305472 | 5.3:+30670378 | None:intergenic |
| CAAGGCTCCATTGACAGGTT+TGG | 0.364972 | 5.3:+30668107 | None:intergenic |
| ATAATTTCTATTAGTATGTC+TGG | 0.377820 | 5.3:-30666564 | MS.gene85897:intron |
| ACAACCTTCTCATTTCATCT+TGG | 0.384200 | 5.3:-30670368 | MS.gene85897:CDS |
| ATCCTTGTCTTACAACCATT+CGG | 0.387136 | 5.3:-30666329 | MS.gene85897:CDS |
| CAACCTTCTCATTTCATCTT+GGG | 0.388828 | 5.3:-30670367 | MS.gene85897:CDS |
| GCTTTCTCTGTTGCTTCTGA+TGG | 0.394841 | 5.3:-30670140 | MS.gene85897:CDS |
| GATGACATGGCAACATGTAT+TGG | 0.408681 | 5.3:-30669271 | MS.gene85897:CDS |
| ACGAAGGTTATGCTACCATA+TGG | 0.423142 | 5.3:-30666521 | MS.gene85897:CDS |
| TCCTTGTCTTACAACCATTC+GGG | 0.424268 | 5.3:-30666328 | MS.gene85897:CDS |
| AAAGGATGGTCAGCATCATT+TGG | 0.429051 | 5.3:-30666687 | MS.gene85897:CDS |
| CATTGCAAGGCTCCATTGAC+AGG | 0.429640 | 5.3:+30668102 | None:intergenic |
| TTCCTCAATTTCAGTTTCCC+AGG | 0.443412 | 5.3:-30666369 | MS.gene85897:intron |
| CATCAAATTCGAATGACATT+GGG | 0.454646 | 5.3:-30667404 | MS.gene85897:intron |
| CCTACTTCTAGCATCCCATA+TGG | 0.464155 | 5.3:+30666506 | None:intergenic |
| TCAAGTGTTTATACATAAAG+TGG | 0.465769 | 5.3:-30666151 | MS.gene85897:CDS |
| CAGTTGGATCAGTGGATGGA+CGG | 0.467705 | 5.3:-30667449 | MS.gene85897:CDS |
| ATTGACACCATGTCTGTCTC+GGG | 0.468873 | 5.3:-30668194 | MS.gene85897:CDS |
| TTGACAAGAAGTTATTATCA+TGG | 0.470217 | 5.3:-30668268 | MS.gene85897:CDS |
| CTTCTGATGGATTCATTCGA+AGG | 0.471299 | 5.3:-30670127 | MS.gene85897:intron |
| TGCAACACTATTTGAGTACC+TGG | 0.472971 | 5.3:+30666351 | None:intergenic |
| TTTAAGGTTACTGTAGGCAT+TGG | 0.475663 | 5.3:-30668170 | MS.gene85897:CDS |
| CGACAAACCAAACCTGTCAA+TGG | 0.476431 | 5.3:-30668114 | MS.gene85897:CDS |
| TCATCAAATTCGAATGACAT+TGG | 0.478333 | 5.3:-30667405 | MS.gene85897:CDS |
| TGGTACATACCTTCTGCATA+AGG | 0.481320 | 5.3:+30668050 | None:intergenic |
| AAAGTGGACAACATTGATAT+CGG | 0.487576 | 5.3:-30666135 | MS.gene85897:CDS |
| TTTCTTGCAGGATTTGCAGT+TGG | 0.488184 | 5.3:-30667465 | MS.gene85897:intron |
| TCTGGAATTGTTGACCCAAT+GGG | 0.493986 | 5.3:-30669301 | MS.gene85897:CDS |
| TGACAAGAAGTTATTATCAT+GGG | 0.507588 | 5.3:-30668267 | MS.gene85897:CDS |
| AAGAAATTGTCAATTCCAAT+CGG | 0.510013 | 5.3:-30670429 | MS.gene85897:CDS |
| CTGGAAATTGCATCACCGAT+TGG | 0.511355 | 5.3:+30670414 | None:intergenic |
| TGTCATCGTGACTACCCATT+GGG | 0.522131 | 5.3:+30669287 | None:intergenic |
| GATTGACACCATGTCTGTCT+CGG | 0.530535 | 5.3:-30668195 | MS.gene85897:CDS |
| CGTTCAATTCCTTATGCAGA+AGG | 0.531080 | 5.3:-30668059 | MS.gene85897:intron |
| ATGTCTGGTGCATTTGTCAC+TGG | 0.544544 | 5.3:-30666549 | MS.gene85897:CDS |
| ATGTCATCGTGACTACCCAT+TGG | 0.545659 | 5.3:+30669286 | None:intergenic |
| TCGGGGTTTAAGGTTACTGT+AGG | 0.551548 | 5.3:-30668176 | MS.gene85897:CDS |
| AAGTAGGAAAAGACTAATTG+AGG | 0.554607 | 5.3:-30666490 | MS.gene85897:intron |
| CGAAGGTTATGCTACCATAT+GGG | 0.555039 | 5.3:-30666520 | MS.gene85897:CDS |
| CTTAATTGTGTACCATTGCA+AGG | 0.556384 | 5.3:+30668089 | None:intergenic |
| ATACGATTTGGACGCTTCTG+TGG | 0.562700 | 5.3:-30670228 | MS.gene85897:CDS |
| ACTCTGACAGATATACGTTC+CGG | 0.567876 | 5.3:-30666724 | MS.gene85897:intron |
| TTCTGGAATTGTTGACCCAA+TGG | 0.569817 | 5.3:-30669302 | MS.gene85897:CDS |
| CCATATGGGATGCTAGAAGT+AGG | 0.571549 | 5.3:-30666506 | MS.gene85897:CDS |
| TCTTGATTGTTGTTTCTCTG+AGG | 0.576939 | 5.3:-30670174 | MS.gene85897:CDS |
| TTTGCAGTTGGATCAGTGGA+TGG | 0.578867 | 5.3:-30667453 | MS.gene85897:CDS |
| CCGGTGTCATCCAAAATCAA+AGG | 0.586288 | 5.3:-30666705 | MS.gene85897:CDS |
| TCCCGAATGGTTGTAAGACA+AGG | 0.598890 | 5.3:+30666327 | None:intergenic |
| CAGCTAGAAGCTGTCCCGAA+TGG | 0.610239 | 5.3:+30666314 | None:intergenic |
| AGTTGGATCAGTGGATGGAC+GGG | 0.611964 | 5.3:-30667448 | MS.gene85897:CDS |
| CTGTCAATGGAGCCTTGCAA+TGG | 0.616655 | 5.3:-30668101 | MS.gene85897:CDS |
| AATGGGTAGTCACGATGACA+TGG | 0.618721 | 5.3:-30669284 | MS.gene85897:CDS |
| TCGGATCAAGTTCTGCTCGA+AGG | 0.619168 | 5.3:-30666116 | MS.gene85897:CDS |
| ACTTTATGTATAAACACTTG+AGG | 0.625298 | 5.3:+30666153 | None:intergenic |
| TGTCATCCAAAATCAAAGGA+TGG | 0.627782 | 5.3:-30666701 | MS.gene85897:CDS |
| TTATGTATAAACACTTGAGG+AGG | 0.628759 | 5.3:+30666156 | None:intergenic |
| AGTTGCGTAAATCATAAACA+TGG | 0.628890 | 5.3:+30668138 | None:intergenic |
| AGGATTTGCAGTTGGATCAG+TGG | 0.634576 | 5.3:-30667457 | MS.gene85897:CDS |
| TTGACACCATGTCTGTCTCG+GGG | 0.635349 | 5.3:-30668193 | MS.gene85897:CDS |
| CTTAAACCCCGAGACAGACA+TGG | 0.644412 | 5.3:+30668187 | None:intergenic |
| TGTCCCAAGATGAAATGAGA+AGG | 0.647507 | 5.3:+30670364 | None:intergenic |
| TTTGTCACTGGTGATAACGA+AGG | 0.671951 | 5.3:-30666537 | MS.gene85897:CDS |
| GCAACACTATTTGAGTACCT+GGG | 0.674620 | 5.3:+30666352 | None:intergenic |
| AGAAGCAACAGAGAAAGCAA+CGG | 0.681074 | 5.3:+30670145 | None:intergenic |
| CTTCTGCATAAGGAATTGAA+CGG | 0.696295 | 5.3:+30668060 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTATAATAATTTAAA+TGG | + | chr5.3:30669960-30669979 | None:intergenic | 0.0% |
| !! | ATGTTATTATATTTAAATTG+AGG | - | chr5.3:30666559-30666578 | MS.gene85897:intron | 10.0% |
| !! | TGTTATTATATTTAAATTGA+GGG | - | chr5.3:30666560-30666579 | MS.gene85897:intron | 10.0% |
| !! | TTGTTAATAATTCTAAATTA+TGG | - | chr5.3:30669460-30669479 | MS.gene85897:intron | 10.0% |
| !!! | TATACTTTTAAAATATGATT+TGG | + | chr5.3:30668149-30668168 | None:intergenic | 10.0% |
| !! | AATATACTACATTTATGATA+TGG | + | chr5.3:30668047-30668066 | None:intergenic | 15.0% |
| !! | ATATTTAAGTGATCTATTAT+TGG | - | chr5.3:30667626-30667645 | MS.gene85897:intron | 15.0% |
| !! | ATCATAATATAAACTTTACA+TGG | + | chr5.3:30668243-30668262 | None:intergenic | 15.0% |
| !! | ATGATTAATAAATTCTGAAT+AGG | - | chr5.3:30667955-30667974 | MS.gene85897:intron | 15.0% |
| !! | TATTCATGAAAATTGAAAAA+TGG | + | chr5.3:30667842-30667861 | None:intergenic | 15.0% |
| !! | TGATTAATAAATTCTGAATA+GGG | - | chr5.3:30667956-30667975 | MS.gene85897:intron | 15.0% |
| !! | TTTGTTAATATGATATTGAA+AGG | - | chr5.3:30667720-30667739 | MS.gene85897:intron | 15.0% |
| !!! | ATTTTCAAATTTGAGTTTAA+AGG | - | chr5.3:30666829-30666848 | MS.gene85897:intron | 15.0% |
| !!! | TATCTTATTTTTAGTTACTT+GGG | - | chr5.3:30668979-30668998 | MS.gene85897:intron | 15.0% |
| !!! | TGAATCAAAATATTTTATGT+TGG | - | chr5.3:30669766-30669785 | MS.gene85897:intron | 15.0% |
| !!! | TTATCTTATTTTTAGTTACT+TGG | - | chr5.3:30668978-30668997 | MS.gene85897:intron | 15.0% |
| !! | AAATGGAACAAATAAAAACA+AGG | + | chr5.3:30667363-30667382 | None:intergenic | 20.0% |
| !! | AAATTACTAATAAATGCAAC+TGG | + | chr5.3:30669574-30669593 | None:intergenic | 20.0% |
| !! | AATAAAAATTGTTTGGATGT+TGG | - | chr5.3:30668173-30668192 | MS.gene85897:CDS | 20.0% |
| !! | AATTGACAATTTCTTTGATT+TGG | + | chr5.3:30666132-30666151 | None:intergenic | 20.0% |
| !! | ATAAAATAAGACAGATTTGA+TGG | + | chr5.3:30668539-30668558 | None:intergenic | 20.0% |
| !! | ATAATTTCTATTAGTATGTC+TGG | - | chr5.3:30670002-30670021 | MS.gene85897:intron | 20.0% |
| !! | ATGATATTGAAAGGATATAT+TGG | - | chr5.3:30667729-30667748 | MS.gene85897:intron | 20.0% |
| !! | ATGTAATGTATAATTACAAC+TGG | + | chr5.3:30668100-30668119 | None:intergenic | 20.0% |
| !! | ATTCTTCTAACAAAAAAGTA+TGG | - | chr5.3:30668742-30668761 | MS.gene85897:intron | 20.0% |
| !! | TAACAAATAGTCATTAATGT+CGG | + | chr5.3:30666606-30666625 | None:intergenic | 20.0% |
| !! | TGGTCTCAAATATAATTATT+AGG | - | chr5.3:30669539-30669558 | MS.gene85897:intron | 20.0% |
| !!! | AAAACAAATTTAGTTTTGAG+AGG | + | chr5.3:30669741-30669760 | None:intergenic | 20.0% |
| !!! | AAGTAACTTACATTTTACAT+TGG | + | chr5.3:30667326-30667345 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGTTAGAAGAATA+GGG | + | chr5.3:30668741-30668760 | None:intergenic | 20.0% |
| !!! | ATAATGCACCTAATTTTTTT+GGG | + | chr5.3:30669237-30669256 | None:intergenic | 20.0% |
| !!! | TACTTTTTTGTTAGAAGAAT+AGG | + | chr5.3:30668742-30668761 | None:intergenic | 20.0% |
| !!! | TATAATGCACCTAATTTTTT+TGG | + | chr5.3:30669238-30669257 | None:intergenic | 20.0% |
| !!! | TTATTTTATTTTGTCAACCT+TGG | - | chr5.3:30668550-30668569 | MS.gene85897:intron | 20.0% |
| !!! | TTTTTATTTGTTCCATTTGT+TGG | - | chr5.3:30667365-30667384 | MS.gene85897:intron | 20.0% |
| ! | AAAACAATAGAGAGAATGTT+AGG | - | chr5.3:30667421-30667440 | MS.gene85897:CDS | 25.0% |
| ! | AAACAATAGAGAGAATGTTA+GGG | - | chr5.3:30667422-30667441 | MS.gene85897:CDS | 25.0% |
| ! | AACTAAACACAAATGAAACA+TGG | + | chr5.3:30670112-30670131 | None:intergenic | 25.0% |
| ! | AAGAAATTGTCAATTCCAAT+CGG | - | chr5.3:30666137-30666156 | MS.gene85897:CDS | 25.0% |
| ! | ACTTTATGTATAAACACTTG+AGG | + | chr5.3:30670416-30670435 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5.3:30666718-30666737 | MS.gene85897:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr5.3:30666737-30666718 | None:intergenic | 25.0% |
| ! | CTCTGTAAGTTACAAAATAA+AGG | + | chr5.3:30670385-30670404 | None:intergenic | 25.0% |
| ! | GAAAACTTTCTTAAACTTCA+TGG | + | chr5.3:30670349-30670368 | None:intergenic | 25.0% |
| ! | GGAAAACCAAGAAAAAATAT+AGG | - | chr5.3:30667582-30667601 | MS.gene85897:intron | 25.0% |
| ! | TACATATTATACATTCTCTC+TGG | - | chr5.3:30666661-30666680 | MS.gene85897:CDS | 25.0% |
| ! | TACATGGACATAATAAAACA+TGG | + | chr5.3:30668227-30668246 | None:intergenic | 25.0% |
| ! | TAGCAAATTATTAGAACATG+TGG | + | chr5.3:30669816-30669835 | None:intergenic | 25.0% |
| ! | TCAAGTGTTTATACATAAAG+TGG | - | chr5.3:30670415-30670434 | MS.gene85897:CDS | 25.0% |
| ! | TGAAATTGAGGAAAAAAAGA+TGG | + | chr5.3:30670190-30670209 | None:intergenic | 25.0% |
| ! | TGACAAGAAGTTATTATCAT+GGG | - | chr5.3:30668299-30668318 | MS.gene85897:intron | 25.0% |
| ! | TTAAATATGCATACGTGAAA+TGG | + | chr5.3:30669195-30669214 | None:intergenic | 25.0% |
| ! | TTGACAAGAAGTTATTATCA+TGG | - | chr5.3:30668298-30668317 | MS.gene85897:intron | 25.0% |
| !! | AACATGTTGCTATTAAGATT+TGG | - | chr5.3:30668573-30668592 | MS.gene85897:intron | 25.0% |
| !! | TCTACTATTTTGTTAAACAG+CGG | - | chr5.3:30669365-30669384 | MS.gene85897:intron | 25.0% |
| !! | TGAAGTTTAAGAAAGTTTTC+TGG | - | chr5.3:30670349-30670368 | MS.gene85897:intron | 25.0% |
| !!! | ATGCTATTTGCATAGTTTTT+AGG | + | chr5.3:30668914-30668933 | None:intergenic | 25.0% |
| !!! | ATTGAATCGATTTTGTGTTT+TGG | - | chr5.3:30666296-30666315 | MS.gene85897:CDS | 25.0% |
| !!! | CTTTTTTGTTAGAAGAATAG+GGG | + | chr5.3:30668740-30668759 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGCTGAAAT+GGG | - | chr5.3:30666506-30666525 | MS.gene85897:CDS | 25.0% |
| !!! | GTAAGAAACTTTTCACTTTT+TGG | + | chr5.3:30666711-30666692 | None:intergenic | 25.0% |
| !!! | TGACATTTATTTTGCTGAAA+TGG | - | chr5.3:30666505-30666524 | MS.gene85897:CDS | 25.0% |
| AAAACATGCATCATGATCAT+AGG | + | chr5.3:30667018-30667037 | None:intergenic | 30.0% | |
| AAAACATGCATCATGATCAT+GGG | + | chr5.3:30667018-30667037 | None:intergenic | 30.0% | |
| AAAGTGGACAACATTGATAT+CGG | - | chr5.3:30670431-30670450 | MS.gene85897:CDS | 30.0% | |
| AAATGAAAATATACTCCCTC+TGG | + | chr5.3:30666813-30666832 | None:intergenic | 30.0% | |
| AAGGACAATTCAATAACTAG+CGG | - | chr5.3:30667555-30667574 | MS.gene85897:intron | 30.0% | |
| AAGTAGGAAAAGACTAATTG+AGG | - | chr5.3:30670076-30670095 | MS.gene85897:intron | 30.0% | |
| ACAAATAAAAACAAGGAGCA+AGG | + | chr5.3:30667356-30667375 | None:intergenic | 30.0% | |
| AGTTGCGTAAATCATAAACA+TGG | + | chr5.3:30668431-30668450 | None:intergenic | 30.0% | |
| ATATAAAACGCTCTTGCATA+TGG | - | chr5.3:30668777-30668796 | MS.gene85897:intron | 30.0% | |
| ATGAGAAGGTTGTTAGAATT+AGG | + | chr5.3:30666191-30666210 | None:intergenic | 30.0% | |
| ATTATGATCATGATTGTTGC+AGG | - | chr5.3:30668255-30668274 | MS.gene85897:CDS | 30.0% | |
| ATTGTCCTTCATAGTTCATA+TGG | + | chr5.3:30667544-30667563 | None:intergenic | 30.0% | |
| CATCAAATTCGAATGACATT+GGG | - | chr5.3:30669162-30669181 | MS.gene85897:intron | 30.0% | |
| CCCAATATTAGGTTAAGAAT+GGG | + | chr5.3:30668666-30668685 | None:intergenic | 30.0% | |
| CCCATTCTTAACCTAATATT+GGG | - | chr5.3:30668663-30668682 | MS.gene85897:intron | 30.0% | |
| CCTATAAATTTCAGCTTAAC+AGG | + | chr5.3:30667233-30667252 | None:intergenic | 30.0% | |
| CCTGTTAAGCTGAAATTTAT+AGG | - | chr5.3:30667230-30667249 | MS.gene85897:intron | 30.0% | |
| GAATCTTCGTTTATACGATT+TGG | - | chr5.3:30666326-30666345 | MS.gene85897:CDS | 30.0% | |
| GGAGCACAAATGAAATAAAA+AGG | - | chr5.3:30667977-30667996 | MS.gene85897:intron | 30.0% | |
| GTTTAAAGGACATGCATTAT+CGG | - | chr5.3:30666843-30666862 | MS.gene85897:intron | 30.0% | |
| TAAATATCCCATGTAGTATC+AGG | + | chr5.3:30669008-30669027 | None:intergenic | 30.0% | |
| TACATTTATGATATGGCAAG+TGG | + | chr5.3:30668040-30668059 | None:intergenic | 30.0% | |
| TCATCAAATTCGAATGACAT+TGG | - | chr5.3:30669161-30669180 | MS.gene85897:intron | 30.0% | |
| TGATAAGATGAAACATACAG+TGG | + | chr5.3:30669931-30669950 | None:intergenic | 30.0% | |
| TTATGTATAAACACTTGAGG+AGG | + | chr5.3:30670413-30670432 | None:intergenic | 30.0% | |
| TTTCAAATGCACAACATACA+AGG | - | chr5.3:30669412-30669431 | MS.gene85897:intron | 30.0% | |
| TTTCTTAAACTTCATGGTTC+AGG | + | chr5.3:30670343-30670362 | None:intergenic | 30.0% | |
| ! | AAGTGATCAAGTTCTTTTGT+GGG | + | chr5.3:30669295-30669314 | None:intergenic | 30.0% |
| ! | ACATGGATTTTATCAATGCT+AGG | + | chr5.3:30666942-30666961 | None:intergenic | 30.0% |
| ! | ATAGTAGAGTCTTGTCTTAA+AGG | - | chr5.3:30667465-30667484 | MS.gene85897:intron | 30.0% |
| ! | TAGTAGAGTCTTGTCTTAAA+GGG | - | chr5.3:30667466-30667485 | MS.gene85897:intron | 30.0% |
| ! | TTCTTACATTTTAGACCAGA+GGG | - | chr5.3:30666795-30666814 | MS.gene85897:intron | 30.0% |
| ! | TTTCTTACATTTTAGACCAG+AGG | - | chr5.3:30666794-30666813 | MS.gene85897:intron | 30.0% |
| !! | AGCATTGATAAAATCCATGT+TGG | - | chr5.3:30666942-30666961 | MS.gene85897:intron | 30.0% |
| !! | CTATTATTGGTCTTGATTTG+TGG | - | chr5.3:30667639-30667658 | MS.gene85897:intron | 30.0% |
| !! | TCTTTAGAATTGAGAGTTCA+GGG | + | chr5.3:30668642-30668661 | None:intergenic | 30.0% |
| !!! | ACCTAATTTTTTTGGGAAGA+GGG | + | chr5.3:30669230-30669249 | None:intergenic | 30.0% |
| !!! | ATTGTTTGGATGTTGGTTTT+AGG | - | chr5.3:30668180-30668199 | MS.gene85897:CDS | 30.0% |
| !!! | GCTTGACCTATATTTTTTCT+TGG | + | chr5.3:30667591-30667610 | None:intergenic | 30.0% |
| !!! | GTTTTTAGGATGTAGTTAAC+TGG | + | chr5.3:30668900-30668919 | None:intergenic | 30.0% |
| AAAATTGCAACTCAAAGCTC+TGG | - | chr5.3:30668000-30668019 | MS.gene85897:intron | 35.0% | |
| AAGATAATTCCTTCTCTGCA+TGG | - | chr5.3:30667810-30667829 | MS.gene85897:intron | 35.0% | |
| AAGCTTAGAAATCCATCTTG+TGG | + | chr5.3:30668689-30668708 | None:intergenic | 35.0% | |
| AATTCAATAACTAGCGGTAG+AGG | - | chr5.3:30667561-30667580 | MS.gene85897:intron | 35.0% | |
| ACAACAGGAAAAAGGGAAAA+AGG | + | chr5.3:30669270-30669289 | None:intergenic | 35.0% | |
| ACAACCTTCTCATTTCATCT+TGG | - | chr5.3:30666198-30666217 | MS.gene85897:intron | 35.0% | |
| ACAAGATGGAGTATGATACA+TGG | + | chr5.3:30666899-30666918 | None:intergenic | 35.0% | |
| ACTAATAAATGCAACTGGCT+AGG | + | chr5.3:30669569-30669588 | None:intergenic | 35.0% | |
| AGAGAAGGAATTATCTTGTG+TGG | + | chr5.3:30667807-30667826 | None:intergenic | 35.0% | |
| ATAAGCGTAGTAGGAAAGAT+AGG | + | chr5.3:30667784-30667803 | None:intergenic | 35.0% | |
| ATCCTTGTCTTACAACCATT+CGG | - | chr5.3:30670237-30670256 | MS.gene85897:CDS | 35.0% | |
| ATGGATTTCTAAGCTTCACA+AGG | - | chr5.3:30668693-30668712 | MS.gene85897:intron | 35.0% | |
| ATTAGGCGCAAATTGAATTC+TGG | + | chr5.3:30666174-30666193 | None:intergenic | 35.0% | |
| CAAAACATGCATCATGATCA+TGG | + | chr5.3:30667019-30667038 | None:intergenic | 35.0% | |
| CAAACAACAACTCAACAAGA+TGG | + | chr5.3:30666913-30666932 | None:intergenic | 35.0% | |
| CAACCTTCTCATTTCATCTT+GGG | - | chr5.3:30666199-30666218 | MS.gene85897:intron | 35.0% | |
| CTTAATAGCAACATGTTCCA+AGG | + | chr5.3:30668570-30668589 | None:intergenic | 35.0% | |
| CTTAATTGTGTACCATTGCA+AGG | + | chr5.3:30668480-30668499 | None:intergenic | 35.0% | |
| CTTCTGCATAAGGAATTGAA+CGG | + | chr5.3:30668509-30668528 | None:intergenic | 35.0% | |
| GCAGGTCTATTAATTACTTC+TGG | - | chr5.3:30668273-30668292 | MS.gene85897:CDS | 35.0% | |
| GCCCAATATTAGGTTAAGAA+TGG | + | chr5.3:30668667-30668686 | None:intergenic | 35.0% | |
| GCCCATTCTTAACCTAATAT+TGG | - | chr5.3:30668662-30668681 | MS.gene85897:intron | 35.0% | |
| GTAGACCATATGAACTATGA+AGG | - | chr5.3:30667536-30667555 | MS.gene85897:intron | 35.0% | |
| TAACCCCAAAAACTAGCTAA+AGG | + | chr5.3:30668612-30668631 | None:intergenic | 35.0% | |
| TCCCTCTTCCCAAAAAAATT+AGG | - | chr5.3:30669226-30669245 | MS.gene85897:intron | 35.0% | |
| TGTCAGAGAAAATCAGTCTA+GGG | + | chr5.3:30669645-30669664 | None:intergenic | 35.0% | |
| TGTCATCCAAAATCAAAGGA+TGG | - | chr5.3:30669865-30669884 | MS.gene85897:intron | 35.0% | |
| TTGTCAGAGAAAATCAGTCT+AGG | + | chr5.3:30669646-30669665 | None:intergenic | 35.0% | |
| ! | AATCCATGTTGGTCTATAAG+TGG | - | chr5.3:30666953-30666972 | MS.gene85897:intron | 35.0% |
| ! | AATGGGCAATTTTCGTTGAA+AGG | - | chr5.3:30666523-30666542 | MS.gene85897:CDS | 35.0% |
| ! | AGCCTTTGAAAAAGTTCTCA+AGG | + | chr5.3:30668959-30668978 | None:intergenic | 35.0% |
| ! | AGTAGAGTCTTGTCTTAAAG+GGG | - | chr5.3:30667467-30667486 | MS.gene85897:intron | 35.0% |
| ! | ATGGATTAAAGACACGAGAA+AGG | - | chr5.3:30669479-30669498 | MS.gene85897:intron | 35.0% |
| ! | ATGGGCAATTTTCGTTGAAA+GGG | - | chr5.3:30666524-30666543 | MS.gene85897:CDS | 35.0% |
| ! | CAAGTGATCAAGTTCTTTTG+TGG | + | chr5.3:30669296-30669315 | None:intergenic | 35.0% |
| ! | CTCACATTTCTTTTGCTTCT+TGG | + | chr5.3:30670297-30670316 | None:intergenic | 35.0% |
| ! | CTTTGAAAAAGTTCTCAAGG+TGG | + | chr5.3:30668956-30668975 | None:intergenic | 35.0% |
| ! | GTAAACCAGTTTTACACTGA+CGG | - | chr5.3:30666867-30666886 | MS.gene85897:intron | 35.0% |
| ! | GTTTTGCAGTTTTACACTGA+CGG | - | chr5.3:30667033-30667052 | MS.gene85897:intron | 35.0% |
| ! | TATAGGTATGACTTGCATTC+TGG | - | chr5.3:30667247-30667266 | MS.gene85897:intron | 35.0% |
| ! | TCTAAGTCTGATTTTCTTGC+AGG | - | chr5.3:30669089-30669108 | MS.gene85897:intron | 35.0% |
| ! | TGTTCCATTTGTTGGATGAA+TGG | - | chr5.3:30667373-30667392 | MS.gene85897:intron | 35.0% |
| ! | TTATATTTGAGACCAGAGCA+TGG | + | chr5.3:30669534-30669553 | None:intergenic | 35.0% |
| ! | TTTAAGGTTACTGTAGGCAT+TGG | - | chr5.3:30668396-30668415 | MS.gene85897:intron | 35.0% |
| !! | CTCTTTAGAATTGAGAGTTC+AGG | + | chr5.3:30668643-30668662 | None:intergenic | 35.0% |
| !! | TATTGGTCTTGATTTGTGGT+TGG | - | chr5.3:30667643-30667662 | MS.gene85897:intron | 35.0% |
| !! | TCTTGATTGTTGTTTCTCTG+AGG | - | chr5.3:30666392-30666411 | MS.gene85897:intron | 35.0% |
| !!! | CACCTAATTTTTTTGGGAAG+AGG | + | chr5.3:30669231-30669250 | None:intergenic | 35.0% |
| !!! | CACCTTGAGAACTTTTTCAA+AGG | - | chr5.3:30668954-30668973 | MS.gene85897:intron | 35.0% |
| AAAAACTAGCTAAAGGAGGG+AGG | + | chr5.3:30668605-30668624 | None:intergenic | 40.0% | |
| AAAACTAGCTAAAGGAGGGA+GGG | + | chr5.3:30668604-30668623 | None:intergenic | 40.0% | |
| AAAGGATGGTCAGCATCATT+TGG | - | chr5.3:30669879-30669898 | MS.gene85897:intron | 40.0% | |
| AAGTGGTAGCCTTCAAAATC+AGG | - | chr5.3:30666970-30666989 | MS.gene85897:intron | 40.0% | |
| ACGAAGGTTATGCTACCATA+TGG | - | chr5.3:30670045-30670064 | MS.gene85897:intron | 40.0% | |
| ACTCTGACAGATATACGTTC+CGG | - | chr5.3:30669842-30669861 | MS.gene85897:intron | 40.0% | |
| AGAAGCAACAGAGAAAGCAA+CGG | + | chr5.3:30666424-30666443 | None:intergenic | 40.0% | |
| AGCCTTCAAAATCAGGCATT+TGG | - | chr5.3:30666977-30666996 | MS.gene85897:intron | 40.0% | |
| AGGAAAAAGGGAAAAAGGAG+AGG | + | chr5.3:30669265-30669284 | None:intergenic | 40.0% | |
| ATAATATGTACAACCTCCGC+AGG | + | chr5.3:30666651-30666670 | None:intergenic | 40.0% | |
| CCCAAAAACTAGCTAAAGGA+GGG | + | chr5.3:30668608-30668627 | None:intergenic | 40.0% | |
| CGAAGGTTATGCTACCATAT+GGG | - | chr5.3:30670046-30670065 | MS.gene85897:intron | 40.0% | |
| CGTTCAATTCCTTATGCAGA+AGG | - | chr5.3:30668507-30668526 | MS.gene85897:intron | 40.0% | |
| CTACCACTTATAGACCAACA+TGG | + | chr5.3:30666959-30666978 | None:intergenic | 40.0% | |
| GATGACATGGCAACATGTAT+TGG | - | chr5.3:30667295-30667314 | MS.gene85897:intron | 40.0% | |
| GCAACACTATTTGAGTACCT+GGG | + | chr5.3:30670217-30670236 | None:intergenic | 40.0% | |
| GTGTCCATTCATCCAACAAA+TGG | + | chr5.3:30667380-30667399 | None:intergenic | 40.0% | |
| TAAAACGCTCTTGCATATGG+AGG | - | chr5.3:30668780-30668799 | MS.gene85897:intron | 40.0% | |
| TAATATGTACAACCTCCGCA+GGG | + | chr5.3:30666650-30666669 | None:intergenic | 40.0% | |
| TACCTGGGAAACTGAAATTG+AGG | + | chr5.3:30670202-30670221 | None:intergenic | 40.0% | |
| TCCTTGTCTTACAACCATTC+GGG | - | chr5.3:30670238-30670257 | MS.gene85897:CDS | 40.0% | |
| TGATTCAAAATCCAACCCTG+CGG | - | chr5.3:30666632-30666651 | MS.gene85897:intron | 40.0% | |
| TGCAACACTATTTGAGTACC+TGG | + | chr5.3:30670218-30670237 | None:intergenic | 40.0% | |
| TGGGTTTCCTGATACTACAT+GGG | - | chr5.3:30668998-30669017 | MS.gene85897:intron | 40.0% | |
| TGGTACATACCTTCTGCATA+AGG | + | chr5.3:30668519-30668538 | None:intergenic | 40.0% | |
| TGTCCCAAGATGAAATGAGA+AGG | + | chr5.3:30666205-30666224 | None:intergenic | 40.0% | |
| TTCCTCAATTTCAGTTTCCC+AGG | - | chr5.3:30670197-30670216 | MS.gene85897:CDS | 40.0% | |
| TTGACTGCTTCTCAAGCTTT+GGG | - | chr5.3:30667914-30667933 | MS.gene85897:intron | 40.0% | |
| TTGGGTTTCCTGATACTACA+TGG | - | chr5.3:30668997-30669016 | MS.gene85897:intron | 40.0% | |
| TTTCTTGCAGGATTTGCAGT+TGG | - | chr5.3:30669101-30669120 | MS.gene85897:intron | 40.0% | |
| TTTGACTGCTTCTCAAGCTT+TGG | - | chr5.3:30667913-30667932 | MS.gene85897:intron | 40.0% | |
| ! | AGCCAAATGCCTGATTTTGA+AGG | + | chr5.3:30666982-30667001 | None:intergenic | 40.0% |
| ! | GGCAAACGAAAGGTATATCA+AGG | - | chr5.3:30668201-30668220 | MS.gene85897:CDS | 40.0% |
| ! | TCTGGAATTGTTGACCCAAT+GGG | - | chr5.3:30667265-30667284 | MS.gene85897:intron | 40.0% |
| ! | TGATCACTTGCTGAATGTCA+AGG | - | chr5.3:30669306-30669325 | MS.gene85897:CDS | 40.0% |
| ! | TGGGCAATTTTCGTTGAAAG+GGG | - | chr5.3:30666525-30666544 | MS.gene85897:CDS | 40.0% |
| ! | TTTGTCACTGGTGATAACGA+AGG | - | chr5.3:30670029-30670048 | MS.gene85897:intron | 40.0% |
| !! | CCTTTGATTTTGGATGACAC+CGG | + | chr5.3:30669864-30669883 | None:intergenic | 40.0% |
| !! | CTTCTGATGGATTCATTCGA+AGG | - | chr5.3:30666439-30666458 | MS.gene85897:intron | 40.0% |
| !! | GTCTTGATTTGTGGTTGGAT+AGG | - | chr5.3:30667648-30667667 | MS.gene85897:intron | 40.0% |
| !! | TCAAGGATCTTGTTGACTCA+AGG | - | chr5.3:30669323-30669342 | MS.gene85897:intron | 40.0% |
| !! | TGCTGACCATCCTTTGATTT+TGG | + | chr5.3:30669874-30669893 | None:intergenic | 40.0% |
| !! | TTCTGGAATTGTTGACCCAA+TGG | - | chr5.3:30667264-30667283 | MS.gene85897:intron | 40.0% |
| !!! | CCCTCCTTTAGCTAGTTTTT+GGG | - | chr5.3:30668605-30668624 | MS.gene85897:intron | 40.0% |
| !!! | CCTCCTTTAGCTAGTTTTTG+GGG | - | chr5.3:30668606-30668625 | MS.gene85897:intron | 40.0% |
| !!! | GTTGGTTTTAGGCAAACGAA+AGG | - | chr5.3:30668191-30668210 | MS.gene85897:CDS | 40.0% |
| !!! | TCCCTCCTTTAGCTAGTTTT+TGG | - | chr5.3:30668604-30668623 | MS.gene85897:intron | 40.0% |
| AAACTAGCTAAAGGAGGGAG+GGG | + | chr5.3:30668603-30668622 | None:intergenic | 45.0% | |
| AAGTCTGAGTTCAGGGATTC+AGG | - | chr5.3:30669061-30669080 | MS.gene85897:intron | 45.0% | |
| AATGGGTAGTCACGATGACA+TGG | - | chr5.3:30667282-30667301 | MS.gene85897:intron | 45.0% | |
| ACACCAAGAAGTCTGAGTTC+AGG | - | chr5.3:30669053-30669072 | MS.gene85897:intron | 45.0% | |
| AGGAAAGATAGGAAGAGCAG+AGG | + | chr5.3:30667773-30667792 | None:intergenic | 45.0% | |
| AGGATTTGCAGTTGGATCAG+TGG | - | chr5.3:30669109-30669128 | MS.gene85897:intron | 45.0% | |
| ATCCCTGAACTCAGACTTCT+TGG | + | chr5.3:30669059-30669078 | None:intergenic | 45.0% | |
| ATGCACCGTCAGTGTAAAAC+TGG | + | chr5.3:30666875-30666894 | None:intergenic | 45.0% | |
| ATGTCATCGTGACTACCCAT+TGG | + | chr5.3:30667283-30667302 | None:intergenic | 45.0% | |
| ATGTCTGGTGCATTTGTCAC+TGG | - | chr5.3:30670017-30670036 | MS.gene85897:intron | 45.0% | |
| ATTGACACCATGTCTGTCTC+GGG | - | chr5.3:30668372-30668391 | MS.gene85897:intron | 45.0% | |
| CACCAAGAAGTCTGAGTTCA+GGG | - | chr5.3:30669054-30669073 | MS.gene85897:intron | 45.0% | |
| CCATATGGGATGCTAGAAGT+AGG | - | chr5.3:30670060-30670079 | MS.gene85897:intron | 45.0% | |
| CCATCTTGTGGCCCAATATT+AGG | + | chr5.3:30668677-30668696 | None:intergenic | 45.0% | |
| CCATGCTTTGTGTGTGCAAT+AGG | + | chr5.3:30669438-30669457 | None:intergenic | 45.0% | |
| CCCCAAAAACTAGCTAAAGG+AGG | + | chr5.3:30668609-30668628 | None:intergenic | 45.0% | |
| CCTAATATTGGGCCACAAGA+TGG | - | chr5.3:30668674-30668693 | MS.gene85897:intron | 45.0% | |
| CCTACTTCTAGCATCCCATA+TGG | + | chr5.3:30670063-30670082 | None:intergenic | 45.0% | |
| CCTATTGCACACACAAAGCA+TGG | - | chr5.3:30669435-30669454 | MS.gene85897:intron | 45.0% | |
| CGACAAACCAAACCTGTCAA+TGG | - | chr5.3:30668452-30668471 | MS.gene85897:intron | 45.0% | |
| CTGGAAATTGCATCACCGAT+TGG | + | chr5.3:30666155-30666174 | None:intergenic | 45.0% | |
| CTTGTGTGGATAAGCGTAGT+AGG | + | chr5.3:30667793-30667812 | None:intergenic | 45.0% | |
| GAGACCAGAGCATGGTTTAT+AGG | + | chr5.3:30669526-30669545 | None:intergenic | 45.0% | |
| GATTGACACCATGTCTGTCT+CGG | - | chr5.3:30668371-30668390 | MS.gene85897:intron | 45.0% | |
| GTGACCTATAAACCATGCTC+TGG | - | chr5.3:30669519-30669538 | MS.gene85897:intron | 45.0% | |
| GTGGGCAACAACAGGAAAAA+GGG | + | chr5.3:30669277-30669296 | None:intergenic | 45.0% | |
| TAGAAGAATAGGGGTAGCAG+CGG | + | chr5.3:30668731-30668750 | None:intergenic | 45.0% | |
| TCCCGAATGGTTGTAAGACA+AGG | + | chr5.3:30670242-30670261 | None:intergenic | 45.0% | |
| TGGAAGAAACCATGCAGAGA+AGG | + | chr5.3:30667822-30667841 | None:intergenic | 45.0% | |
| TGTCATCGTGACTACCCATT+GGG | + | chr5.3:30667282-30667301 | None:intergenic | 45.0% | |
| TGTGGGCAACAACAGGAAAA+AGG | + | chr5.3:30669278-30669297 | None:intergenic | 45.0% | |
| TTTGCAGTTGGATCAGTGGA+TGG | - | chr5.3:30669113-30669132 | MS.gene85897:intron | 45.0% | |
| ! | ATACGATTTGGACGCTTCTG+TGG | - | chr5.3:30666338-30666357 | MS.gene85897:CDS | 45.0% |
| ! | GCTTTCTCTGTTGCTTCTGA+TGG | - | chr5.3:30666426-30666445 | MS.gene85897:intron | 45.0% |
| ! | GTTCTTTTGTGGGCAACAAC+AGG | + | chr5.3:30669285-30669304 | None:intergenic | 45.0% |
| ! | TCGGGGTTTAAGGTTACTGT+AGG | - | chr5.3:30668390-30668409 | MS.gene85897:intron | 45.0% |
| !! | CCGGTGTCATCCAAAATCAA+AGG | - | chr5.3:30669861-30669880 | MS.gene85897:intron | 45.0% |
| !!! | TTTTTTGGGAAGAGGGAGAG+AGG | + | chr5.3:30669223-30669242 | None:intergenic | 45.0% |
| !! | ATATAAAAATAAAAATTGTT+TGG | - | chr5.3:30668166-30668185 | MS.gene85897:CDS | 5.0% |
| AACTAGCTAAAGGAGGGAGG+GGG | + | chr5.3:30668602-30668621 | None:intergenic | 50.0% | |
| AGGAGTCAACTCCTGCTAGT+GGG | - | chr5.3:30667668-30667687 | MS.gene85897:intron | 50.0% | |
| AGTTGGATCAGTGGATGGAC+GGG | - | chr5.3:30669118-30669137 | MS.gene85897:intron | 50.0% | |
| CAAGGCTCCATTGACAGGTT+TGG | + | chr5.3:30668462-30668481 | None:intergenic | 50.0% | |
| CAGTTGGATCAGTGGATGGA+CGG | - | chr5.3:30669117-30669136 | MS.gene85897:intron | 50.0% | |
| CATGTCTGTCTCGGGGTTTA+AGG | - | chr5.3:30668380-30668399 | MS.gene85897:intron | 50.0% | |
| CATTGCAAGGCTCCATTGAC+AGG | + | chr5.3:30668467-30668486 | None:intergenic | 50.0% | |
| CCTGCTAGTGGGAAATGCTT+TGG | - | chr5.3:30667679-30667698 | MS.gene85897:intron | 50.0% | |
| CTGTCAATGGAGCCTTGCAA+TGG | - | chr5.3:30668465-30668484 | MS.gene85897:intron | 50.0% | |
| CTTAAACCCCGAGACAGACA+TGG | + | chr5.3:30668382-30668401 | None:intergenic | 50.0% | |
| TAGGAGTCAACTCCTGCTAG+TGG | - | chr5.3:30667667-30667686 | MS.gene85897:intron | 50.0% | |
| TCGGATCAAGTTCTGCTCGA+AGG | - | chr5.3:30670450-30670469 | MS.gene85897:CDS | 50.0% | |
| TTCAAAATCCAACCCTGCGG+AGG | - | chr5.3:30666635-30666654 | MS.gene85897:intron | 50.0% | |
| TTGACACCATGTCTGTCTCG+GGG | - | chr5.3:30668373-30668392 | MS.gene85897:intron | 50.0% | |
| ! | CCAAAGCATTTCCCACTAGC+AGG | + | chr5.3:30667682-30667701 | None:intergenic | 50.0% |
| ATGTACAACCTCCGCAGGGT+TGG | + | chr5.3:30666646-30666665 | None:intergenic | 55.0% | |
| CAGCTAGAAGCTGTCCCGAA+TGG | + | chr5.3:30670255-30670274 | None:intergenic | 55.0% | |
| !! | GGATGGACGGGTTGCGTTGC+AGG | - | chr5.3:30669130-30669149 | MS.gene85897:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 30666107 | 30670481 | 30666107 | ID=MS.gene85897 |
| chr5.3 | mRNA | 30666107 | 30670481 | 30666107 | ID=MS.gene85897.t1;Parent=MS.gene85897 |
| chr5.3 | exon | 30670362 | 30670481 | 30670362 | ID=MS.gene85897.t1.exon1;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30670362 | 30670481 | 30670362 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30670128 | 30670261 | 30670128 | ID=MS.gene85897.t1.exon2;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30670128 | 30670261 | 30670128 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30669254 | 30669336 | 30669254 | ID=MS.gene85897.t1.exon3;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30669254 | 30669336 | 30669254 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30668060 | 30668311 | 30668060 | ID=MS.gene85897.t1.exon4;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30668060 | 30668311 | 30668060 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30667405 | 30667477 | 30667405 | ID=MS.gene85897.t1.exon5;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30667405 | 30667477 | 30667405 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30666656 | 30666736 | 30666656 | ID=MS.gene85897.t1.exon6;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30666656 | 30666736 | 30666656 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30666491 | 30666572 | 30666491 | ID=MS.gene85897.t1.exon7;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30666491 | 30666572 | 30666491 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30666277 | 30666377 | 30666277 | ID=MS.gene85897.t1.exon8;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30666277 | 30666377 | 30666277 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| chr5.3 | exon | 30666107 | 30666185 | 30666107 | ID=MS.gene85897.t1.exon9;Parent=MS.gene85897.t1 |
| chr5.3 | CDS | 30666107 | 30666185 | 30666107 | ID=cds.MS.gene85897.t1;Parent=MS.gene85897.t1 |
| Gene Sequence |
| Protein sequence |
