Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85967.t1 | XP_013444608.1 | 97.4 | 623 | 16 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1137.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85967.t1 | A0A3Q7ELQ2 | 60.0 | 625 | 209 | 12 | 9 | 623 | 4 | 597 | 2.9e-188 | 659.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85967.t1 | A0A072TP53 | 97.4 | 623 | 16 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1137.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene85967.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050941 | MS.gene85967 | 0.835289 | 1.83E-56 | -1.69E-46 |
MS.gene051541 | MS.gene85967 | 0.805787 | 1.13E-49 | -1.69E-46 |
MS.gene058503 | MS.gene85967 | 0.804069 | 2.58E-49 | -1.69E-46 |
MS.gene059283 | MS.gene85967 | 0.817847 | 2.67E-52 | -1.69E-46 |
MS.gene06010 | MS.gene85967 | 0.833457 | 5.28E-56 | -1.69E-46 |
MS.gene060802 | MS.gene85967 | 0.809905 | 1.50E-50 | -1.69E-46 |
MS.gene060869 | MS.gene85967 | 0.813982 | 1.94E-51 | -1.69E-46 |
MS.gene060870 | MS.gene85967 | 0.830114 | 3.52E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene85967 | MS.gene018737 | PPI |
MS.gene85967 | MS.gene020342 | PPI |
MS.gene97030 | MS.gene85967 | PPI |
MS.gene23513 | MS.gene85967 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85967.t1 | MTR_8g027495 | 97.432 | 623 | 16 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1251 |
MS.gene85967.t1 | MTR_7g117670 | 56.719 | 640 | 169 | 19 | 12 | 623 | 8 | 567 | 0.0 | 601 |
MS.gene85967.t1 | MTR_7g096350 | 54.922 | 193 | 65 | 5 | 431 | 618 | 327 | 502 | 1.27e-55 | 197 |
MS.gene85967.t1 | MTR_7g096350 | 34.310 | 239 | 125 | 8 | 14 | 241 | 9 | 226 | 3.18e-31 | 128 |
MS.gene85967.t1 | MTR_8g067280 | 44.240 | 217 | 98 | 5 | 423 | 617 | 424 | 639 | 1.54e-43 | 166 |
MS.gene85967.t1 | MTR_8g067280 | 35.714 | 196 | 108 | 9 | 51 | 241 | 52 | 234 | 2.07e-21 | 99.0 |
MS.gene85967.t1 | MTR_5g030430 | 42.793 | 222 | 102 | 4 | 419 | 617 | 451 | 670 | 5.05e-42 | 162 |
MS.gene85967.t1 | MTR_5g030430 | 31.343 | 268 | 154 | 8 | 51 | 296 | 43 | 302 | 1.79e-22 | 102 |
MS.gene85967.t1 | MTR_8g024790 | 38.953 | 172 | 96 | 1 | 438 | 600 | 271 | 442 | 2.91e-33 | 133 |
MS.gene85967.t1 | MTR_8g024770 | 41.270 | 189 | 97 | 4 | 438 | 613 | 259 | 446 | 6.07e-33 | 132 |
MS.gene85967.t1 | MTR_5g030420 | 31.472 | 197 | 127 | 4 | 51 | 247 | 26 | 214 | 3.68e-22 | 96.3 |
MS.gene85967.t1 | MTR_5g030420 | 31.472 | 197 | 127 | 4 | 51 | 247 | 26 | 214 | 6.71e-22 | 95.9 |
MS.gene85967.t1 | MTR_8g098275 | 32.597 | 181 | 103 | 6 | 66 | 239 | 14 | 182 | 2.58e-17 | 86.3 |
MS.gene85967.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 398 | 469 | 1.02e-14 | 77.8 |
MS.gene85967.t1 | MTR_4g092700 | 38.938 | 113 | 61 | 2 | 456 | 560 | 156 | 268 | 2.13e-16 | 81.3 |
MS.gene85967.t1 | MTR_2g010450 | 31.618 | 136 | 84 | 2 | 458 | 584 | 177 | 312 | 2.94e-16 | 81.3 |
MS.gene85967.t1 | MTR_1g072320 | 28.283 | 198 | 119 | 7 | 50 | 241 | 8 | 188 | 6.78e-16 | 81.6 |
MS.gene85967.t1 | MTR_1g072320 | 55.000 | 60 | 27 | 0 | 458 | 517 | 470 | 529 | 2.36e-14 | 76.6 |
MS.gene85967.t1 | MTR_5g014640 | 39.252 | 107 | 60 | 2 | 459 | 560 | 155 | 261 | 1.36e-15 | 78.6 |
MS.gene85967.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 241 | 312 | 5.15e-15 | 78.2 |
MS.gene85967.t1 | MTR_5g014600 | 30.405 | 148 | 82 | 3 | 458 | 584 | 149 | 296 | 5.60e-15 | 77.0 |
MS.gene85967.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 305 | 376 | 7.51e-15 | 77.8 |
MS.gene85967.t1 | MTR_2g104550 | 29.221 | 154 | 81 | 3 | 435 | 560 | 96 | 249 | 1.33e-14 | 75.5 |
MS.gene85967.t1 | MTR_3g498695 | 37.500 | 120 | 65 | 1 | 456 | 565 | 296 | 415 | 1.38e-14 | 77.0 |
MS.gene85967.t1 | MTR_3g498695 | 37.500 | 120 | 65 | 1 | 456 | 565 | 296 | 415 | 1.42e-14 | 77.0 |
MS.gene85967.t1 | MTR_4g067010 | 30.286 | 175 | 101 | 3 | 437 | 603 | 136 | 297 | 1.47e-14 | 75.5 |
MS.gene85967.t1 | MTR_1g112680 | 41.489 | 94 | 49 | 2 | 423 | 516 | 288 | 375 | 3.99e-14 | 75.9 |
MS.gene85967.t1 | MTR_4g097950 | 34.711 | 121 | 64 | 2 | 458 | 563 | 70 | 190 | 4.43e-14 | 72.8 |
MS.gene85967.t1 | MTR_6g047550 | 51.562 | 64 | 31 | 0 | 458 | 521 | 173 | 236 | 5.89e-14 | 73.2 |
MS.gene85967.t1 | MTR_0250s0040 | 44.318 | 88 | 44 | 2 | 435 | 522 | 70 | 152 | 6.85e-14 | 72.8 |
MS.gene85967.t1 | MTR_4g097940 | 34.146 | 123 | 62 | 3 | 446 | 558 | 147 | 260 | 7.92e-14 | 73.6 |
MS.gene85967.t1 | MTR_2g084280 | 27.011 | 174 | 113 | 4 | 438 | 605 | 121 | 286 | 9.55e-14 | 73.2 |
MS.gene85967.t1 | MTR_0246s0020 | 44.872 | 78 | 37 | 1 | 444 | 521 | 190 | 261 | 1.11e-13 | 73.6 |
MS.gene85967.t1 | MTR_2g038040 | 29.268 | 164 | 95 | 4 | 459 | 601 | 53 | 216 | 1.26e-13 | 71.6 |
MS.gene85967.t1 | MTR_0246s0020 | 44.872 | 78 | 37 | 1 | 444 | 521 | 190 | 261 | 1.27e-13 | 73.6 |
MS.gene85967.t1 | MTR_5g014520 | 27.922 | 154 | 103 | 1 | 458 | 603 | 157 | 310 | 1.45e-13 | 72.8 |
MS.gene85967.t1 | MTR_4g066380 | 46.753 | 77 | 31 | 1 | 437 | 513 | 142 | 208 | 1.48e-13 | 72.8 |
MS.gene85967.t1 | MTR_4g057270 | 32.353 | 170 | 100 | 7 | 462 | 616 | 153 | 322 | 1.62e-13 | 72.4 |
MS.gene85967.t1 | MTR_4g066460 | 46.753 | 77 | 31 | 1 | 437 | 513 | 144 | 210 | 3.26e-13 | 71.6 |
MS.gene85967.t1 | MTR_0011s0210 | 29.885 | 174 | 107 | 3 | 458 | 619 | 183 | 353 | 4.97e-13 | 71.2 |
MS.gene85967.t1 | MTR_0011s0260 | 28.736 | 174 | 109 | 3 | 458 | 619 | 183 | 353 | 5.03e-13 | 71.2 |
MS.gene85967.t1 | MTR_6g047570 | 29.221 | 154 | 93 | 2 | 458 | 599 | 159 | 308 | 5.42e-13 | 70.9 |
MS.gene85967.t1 | MTR_3g030700 | 26.131 | 199 | 133 | 3 | 438 | 622 | 176 | 374 | 6.37e-13 | 71.2 |
MS.gene85967.t1 | MTR_7g083900 | 53.333 | 60 | 28 | 0 | 456 | 515 | 284 | 343 | 7.00e-13 | 71.6 |
MS.gene85967.t1 | MTR_7g083900 | 53.333 | 60 | 28 | 0 | 456 | 515 | 284 | 343 | 7.08e-13 | 71.6 |
MS.gene85967.t1 | MTR_5g014560 | 26.744 | 172 | 103 | 3 | 460 | 615 | 133 | 297 | 1.80e-12 | 68.9 |
MS.gene85967.t1 | MTR_2g104490 | 31.405 | 121 | 76 | 3 | 446 | 560 | 126 | 245 | 3.97e-12 | 68.2 |
MS.gene85967.t1 | MTR_2g104490 | 31.405 | 121 | 76 | 3 | 446 | 560 | 126 | 245 | 4.04e-12 | 67.8 |
MS.gene85967.t1 | MTR_4g009110 | 38.961 | 77 | 43 | 1 | 444 | 520 | 164 | 236 | 4.97e-12 | 68.2 |
MS.gene85967.t1 | MTR_2g104560 | 24.405 | 168 | 120 | 2 | 459 | 619 | 55 | 222 | 5.90e-12 | 66.2 |
MS.gene85967.t1 | MTR_4g097920 | 48.276 | 58 | 30 | 0 | 454 | 511 | 136 | 193 | 8.08e-12 | 67.0 |
MS.gene85967.t1 | MTR_3g104100 | 24.432 | 176 | 114 | 4 | 462 | 618 | 199 | 374 | 8.61e-12 | 67.8 |
MS.gene85967.t1 | MTR_4g097920 | 48.276 | 58 | 30 | 0 | 454 | 511 | 151 | 208 | 9.02e-12 | 67.0 |
MS.gene85967.t1 | MTR_4g009540 | 37.662 | 77 | 44 | 1 | 444 | 520 | 142 | 214 | 1.50e-11 | 66.2 |
MS.gene85967.t1 | MTR_4g009540 | 37.662 | 77 | 44 | 1 | 444 | 520 | 142 | 214 | 1.77e-11 | 66.2 |
MS.gene85967.t1 | MTR_2g081040 | 24.432 | 176 | 114 | 4 | 462 | 618 | 181 | 356 | 1.87e-11 | 66.6 |
MS.gene85967.t1 | MTR_8g009010 | 30.075 | 133 | 92 | 1 | 382 | 513 | 57 | 189 | 2.58e-11 | 65.9 |
MS.gene85967.t1 | MTR_2g022280 | 24.479 | 192 | 120 | 4 | 457 | 623 | 1 | 192 | 9.97e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85967.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene85967.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene85967.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene85967.t1 | AT2G46510 | 44.427 | 637 | 233 | 16 | 13 | 622 | 8 | 550 | 7.89e-165 | 483 |
MS.gene85967.t1 | AT1G32640 | 32.781 | 604 | 317 | 17 | 51 | 616 | 66 | 618 | 5.47e-73 | 246 |
MS.gene85967.t1 | AT4G16430 | 44.444 | 234 | 101 | 7 | 397 | 618 | 251 | 467 | 2.24e-51 | 184 |
MS.gene85967.t1 | AT4G16430 | 38.610 | 259 | 136 | 9 | 9 | 260 | 2 | 244 | 1.38e-40 | 154 |
MS.gene85967.t1 | AT5G46760 | 44.954 | 218 | 104 | 5 | 413 | 616 | 369 | 584 | 9.11e-46 | 171 |
MS.gene85967.t1 | AT5G46760 | 36.224 | 196 | 102 | 8 | 51 | 237 | 50 | 231 | 3.97e-21 | 98.2 |
MS.gene85967.t1 | AT4G17880 | 42.254 | 213 | 110 | 4 | 419 | 619 | 373 | 584 | 1.67e-43 | 165 |
MS.gene85967.t1 | AT4G17880 | 33.054 | 239 | 140 | 6 | 12 | 241 | 23 | 250 | 3.70e-25 | 110 |
MS.gene85967.t1 | AT5G46830 | 41.772 | 158 | 86 | 2 | 449 | 600 | 334 | 491 | 1.10e-30 | 126 |
MS.gene85967.t1 | AT5G46830 | 31.489 | 235 | 143 | 6 | 71 | 296 | 49 | 274 | 4.05e-16 | 82.0 |
MS.gene85967.t1 | AT4G09820 | 31.351 | 185 | 113 | 4 | 63 | 241 | 25 | 201 | 1.58e-20 | 95.9 |
MS.gene85967.t1 | AT4G09820 | 48.649 | 74 | 27 | 1 | 438 | 511 | 354 | 416 | 6.37e-14 | 75.1 |
MS.gene85967.t1 | AT5G57150 | 32.796 | 186 | 102 | 5 | 438 | 606 | 40 | 219 | 1.01e-19 | 89.4 |
MS.gene85967.t1 | AT4G00870 | 50.549 | 91 | 35 | 1 | 443 | 523 | 224 | 314 | 1.32e-19 | 92.0 |
MS.gene85967.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 17 | 211 | 2.85e-19 | 92.4 |
MS.gene85967.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 440 | 510 | 1.69e-12 | 70.9 |
MS.gene85967.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 12 | 206 | 2.88e-19 | 92.4 |
MS.gene85967.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 435 | 505 | 1.80e-12 | 70.9 |
MS.gene85967.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 20 | 214 | 3.31e-19 | 92.4 |
MS.gene85967.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 443 | 513 | 1.88e-12 | 70.9 |
MS.gene85967.t1 | AT5G57150 | 32.778 | 180 | 98 | 5 | 438 | 600 | 40 | 213 | 4.78e-19 | 87.0 |
MS.gene85967.t1 | AT5G57150 | 32.778 | 180 | 98 | 5 | 438 | 600 | 41 | 214 | 5.77e-19 | 86.7 |
MS.gene85967.t1 | AT5G57150 | 34.591 | 159 | 87 | 4 | 459 | 600 | 56 | 214 | 6.32e-19 | 86.3 |
MS.gene85967.t1 | AT5G57150 | 33.333 | 159 | 89 | 3 | 459 | 600 | 56 | 214 | 6.84e-19 | 87.4 |
MS.gene85967.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.76e-18 | 89.7 |
MS.gene85967.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.38e-13 | 73.2 |
MS.gene85967.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.76e-18 | 89.7 |
MS.gene85967.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.38e-13 | 73.2 |
MS.gene85967.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.76e-18 | 89.7 |
MS.gene85967.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.38e-13 | 73.2 |
MS.gene85967.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 7.10e-18 | 87.4 |
MS.gene85967.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 1.00e-17 | 87.0 |
MS.gene85967.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 1.60e-17 | 86.7 |
MS.gene85967.t1 | AT4G37850 | 29.648 | 199 | 120 | 3 | 425 | 608 | 119 | 312 | 1.17e-16 | 82.0 |
MS.gene85967.t1 | AT4G37850 | 29.648 | 199 | 120 | 3 | 425 | 608 | 119 | 312 | 1.17e-16 | 82.0 |
MS.gene85967.t1 | AT4G29930 | 28.994 | 169 | 105 | 5 | 442 | 605 | 43 | 201 | 1.50e-15 | 76.6 |
MS.gene85967.t1 | AT4G29930 | 29.268 | 164 | 101 | 5 | 442 | 600 | 43 | 196 | 1.55e-15 | 77.0 |
MS.gene85967.t1 | AT4G29930 | 28.144 | 167 | 112 | 3 | 442 | 605 | 43 | 204 | 2.07e-15 | 76.3 |
MS.gene85967.t1 | AT4G29930 | 58.621 | 58 | 24 | 0 | 460 | 517 | 56 | 113 | 3.96e-14 | 71.6 |
MS.gene85967.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 4.80e-14 | 73.2 |
MS.gene85967.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 4.80e-14 | 73.2 |
MS.gene85967.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 5.40e-14 | 72.8 |
MS.gene85967.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 137 | 269 | 1.15e-13 | 73.2 |
MS.gene85967.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 137 | 269 | 1.18e-13 | 73.2 |
MS.gene85967.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 133 | 265 | 1.28e-13 | 72.8 |
MS.gene85967.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.28e-13 | 73.9 |
MS.gene85967.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 109 | 241 | 1.35e-13 | 72.4 |
MS.gene85967.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 109 | 241 | 1.39e-13 | 72.4 |
MS.gene85967.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.53e-13 | 73.9 |
MS.gene85967.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.53e-13 | 73.9 |
MS.gene85967.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.53e-13 | 73.9 |
MS.gene85967.t1 | AT1G12860 | 49.333 | 75 | 34 | 1 | 456 | 530 | 265 | 335 | 1.76e-13 | 73.2 |
MS.gene85967.t1 | AT1G12860 | 49.333 | 75 | 34 | 1 | 456 | 530 | 265 | 335 | 2.04e-13 | 73.2 |
MS.gene85967.t1 | AT2G22760 | 33.333 | 117 | 59 | 3 | 459 | 560 | 120 | 232 | 2.64e-13 | 71.2 |
MS.gene85967.t1 | AT2G22760 | 33.333 | 117 | 59 | 3 | 459 | 560 | 120 | 232 | 2.67e-13 | 71.6 |
MS.gene85967.t1 | AT2G16910 | 53.846 | 65 | 29 | 1 | 462 | 526 | 318 | 381 | 3.10e-13 | 73.2 |
MS.gene85967.t1 | AT2G28160 | 30.380 | 158 | 96 | 5 | 462 | 606 | 135 | 291 | 2.29e-12 | 68.9 |
MS.gene85967.t1 | AT2G28160 | 30.380 | 158 | 96 | 5 | 462 | 606 | 135 | 291 | 2.32e-12 | 68.9 |
MS.gene85967.t1 | AT2G22770 | 50.000 | 66 | 30 | 1 | 452 | 514 | 123 | 188 | 4.72e-12 | 68.2 |
MS.gene85967.t1 | AT1G10610 | 26.452 | 155 | 102 | 3 | 459 | 601 | 265 | 419 | 9.17e-11 | 64.7 |
Find 117 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGAAAAGGAACAGAATT+TGG | 0.212083 | 8.2:-70376875 | MS.gene85967:CDS |
CTATAAGGAGTTGGTTTCTT+TGG | 0.221769 | 8.2:+70375328 | None:intergenic |
GATGATGACAATTATGCTTT+TGG | 0.241708 | 8.2:-70376766 | MS.gene85967:CDS |
GTAGCTCTGATTATTGTGTT+AGG | 0.270853 | 8.2:-70376609 | MS.gene85967:CDS |
CTGATGTTGAAGCTTCTTGC+AGG | 0.272050 | 8.2:-70375910 | MS.gene85967:CDS |
GGTTCTACCCTTCCATTTGC+TGG | 0.277893 | 8.2:+70375833 | None:intergenic |
ATGAAGATTGAAGTGGGTTT+AGG | 0.280941 | 8.2:-70377177 | MS.gene85967:CDS |
GAAACTTGCTATTAGGAAAA+TGG | 0.287769 | 8.2:-70376221 | MS.gene85967:CDS |
TTCGGGAGAAACTTGCTATT+AGG | 0.295924 | 8.2:-70376228 | MS.gene85967:CDS |
AAGTGGGTTTAGGAGGAAAT+AGG | 0.302141 | 8.2:-70377167 | MS.gene85967:CDS |
CGAATTTCTCAGTCAAAGTT+TGG | 0.303426 | 8.2:-70376946 | MS.gene85967:CDS |
TGATTTAGGTGTTGTTGAAT+TGG | 0.318577 | 8.2:-70376536 | MS.gene85967:CDS |
TTGTCCATCTTGGAAATATT+CGG | 0.320643 | 8.2:+70375734 | None:intergenic |
GAGGAAAAGGAACAGAATTT+GGG | 0.321673 | 8.2:-70376874 | MS.gene85967:CDS |
CCAACTTTCAAACAAGAAAA+AGG | 0.322553 | 8.2:+70376385 | None:intergenic |
CAAAGATGCTTTGTCCATCT+TGG | 0.334458 | 8.2:+70375724 | None:intergenic |
CGACTCAACGATATCGATTT+CGG | 0.339702 | 8.2:+70375448 | None:intergenic |
CTTGAACCCTGAACACCATT+TGG | 0.342953 | 8.2:+70376148 | None:intergenic |
CAGAAGCTTCATGCGACATT+TGG | 0.343871 | 8.2:-70376796 | MS.gene85967:CDS |
TCAGTCAAAGTTTGGTGATT+GGG | 0.345613 | 8.2:-70376938 | MS.gene85967:CDS |
GTTTAGGAGGAAATAGGTTA+TGG | 0.348725 | 8.2:-70377161 | MS.gene85967:CDS |
CAAATCCTGCCCGAAAATCT+TGG | 0.349356 | 8.2:+70376267 | None:intergenic |
GTTGGGGAGATGGGTGTTGT+AGG | 0.351229 | 8.2:-70376909 | MS.gene85967:CDS |
TAGCTCTGATTATTGTGTTA+GGG | 0.371392 | 8.2:-70376608 | MS.gene85967:CDS |
CTCAGTCAAAGTTTGGTGAT+TGG | 0.372558 | 8.2:-70376939 | MS.gene85967:CDS |
TTTCGGTGTCTTTGAATGAT+TGG | 0.372935 | 8.2:+70375465 | None:intergenic |
CCTGGTCCACCATGTCCATT+AGG | 0.373360 | 8.2:+70376685 | None:intergenic |
GGCTTTCTGCCACGTTTCCT+TGG | 0.373396 | 8.2:+70375854 | None:intergenic |
GAATATGAACTATGGCTATA+AGG | 0.379179 | 8.2:+70375313 | None:intergenic |
ATGGACAAAGCATCTTTGTT+AGG | 0.382051 | 8.2:-70375719 | MS.gene85967:CDS |
AAGAACAATAGTAATAATAA+TGG | 0.400503 | 8.2:-70376352 | MS.gene85967:CDS |
GATTTAGGTGTTGTTGAATT+GGG | 0.403406 | 8.2:-70376535 | MS.gene85967:CDS |
CTCTGCCTCCACATGATTGA+GGG | 0.404175 | 8.2:+70375811 | None:intergenic |
GAATCCGAGAGAGAGCAATT+AGG | 0.414650 | 8.2:-70375647 | MS.gene85967:CDS |
TTGGGTTCTGTTAGAATTGT+TGG | 0.414761 | 8.2:-70376517 | MS.gene85967:CDS |
TCTCTGCCTCCACATGATTG+AGG | 0.421326 | 8.2:+70375810 | None:intergenic |
CATAGTAGAGTTGAGGGGAT+TGG | 0.428756 | 8.2:-70376295 | MS.gene85967:CDS |
GCAGCTTGAATATCGATATC+AGG | 0.436804 | 8.2:+70375551 | None:intergenic |
TTGCATCTGGGAAGCATTTG+TGG | 0.438927 | 8.2:-70376654 | MS.gene85967:CDS |
CAACACAATCATCGTTTGCT+AGG | 0.442496 | 8.2:-70376453 | MS.gene85967:CDS |
GAGATCAATTGTTGGTGAAT+CGG | 0.451925 | 8.2:-70375939 | MS.gene85967:CDS |
AAATCCTGCCCGAAAATCTT+GGG | 0.454281 | 8.2:+70376268 | None:intergenic |
ATCCTAGTCCCTCCGATGAT+AGG | 0.458410 | 8.2:-70375880 | MS.gene85967:CDS |
AATAATCATAGTAGAGTTGA+GGG | 0.462171 | 8.2:-70376301 | MS.gene85967:CDS |
CCTAATGGACATGGTGGACC+AGG | 0.463512 | 8.2:-70376685 | MS.gene85967:CDS |
GGTTAAGTCGATTTCATCGT+TGG | 0.463827 | 8.2:-70376431 | MS.gene85967:CDS |
AAGCTTCATGCGACATTTGG+TGG | 0.467090 | 8.2:-70376793 | MS.gene85967:CDS |
CGTGGCAGAAAGCCAGCAAA+TGG | 0.467789 | 8.2:-70375845 | MS.gene85967:CDS |
CTATTAGGAAAATGGATGAT+AGG | 0.467799 | 8.2:-70376213 | MS.gene85967:CDS |
CATGGGGAGGCCGTCCGAAT+GGG | 0.483663 | 8.2:-70376186 | MS.gene85967:CDS |
GAACTATGGCTATAAGGAGT+TGG | 0.485125 | 8.2:+70375319 | None:intergenic |
CTAACGTTTCGAATTTCAGT+TGG | 0.492616 | 8.2:-70376987 | MS.gene85967:CDS |
AAATGGATGATAGGCAATCA+TGG | 0.495557 | 8.2:-70376204 | MS.gene85967:CDS |
CTCCTATCATCGGAGGGACT+AGG | 0.496928 | 8.2:+70375878 | None:intergenic |
CCTTCAGTGAGATCAATTGT+TGG | 0.497365 | 8.2:-70375947 | MS.gene85967:CDS |
GGAGGCCGTCCGAATGGGAA+TGG | 0.498948 | 8.2:-70376181 | MS.gene85967:CDS |
AAGATTGAAGTGGGTTTAGG+AGG | 0.500123 | 8.2:-70377174 | MS.gene85967:CDS |
TTTCCTTGGCCTCCTATCAT+CGG | 0.501052 | 8.2:+70375868 | None:intergenic |
AAACTAATTCCATTCCCATT+CGG | 0.503424 | 8.2:+70376172 | None:intergenic |
TGATGTTGAAGCTTCTTGCA+GGG | 0.510338 | 8.2:-70375909 | MS.gene85967:CDS |
GGAACCTAAAGAGGAGGAAA+AGG | 0.510397 | 8.2:-70376887 | MS.gene85967:CDS |
TCATGGGGAGGCCGTCCGAA+TGG | 0.512768 | 8.2:-70376187 | MS.gene85967:CDS |
AACACAATCATCGTTTGCTA+GGG | 0.513978 | 8.2:-70376452 | MS.gene85967:CDS |
CTTCTCCTTTGTCAGCTGCT+CGG | 0.521163 | 8.2:+70375367 | None:intergenic |
TTGGGGAGATGGGTGTTGTA+GGG | 0.522649 | 8.2:-70376908 | MS.gene85967:CDS |
GCATTGCTCGATGAAGGCCT+AGG | 0.526359 | 8.2:+70376073 | None:intergenic |
GATTCCTAATTGCTCTCTCT+CGG | 0.526835 | 8.2:+70375643 | None:intergenic |
TTAGGAATCGCTTCTAGAGA+TGG | 0.528320 | 8.2:-70375629 | MS.gene85967:CDS |
GATATTCAAGCTGCACAAGA+TGG | 0.542476 | 8.2:-70375542 | MS.gene85967:CDS |
TCAGCTGCATTGCTCGATGA+AGG | 0.543958 | 8.2:+70376067 | None:intergenic |
CCAGATGCAAAACACTTACC+TGG | 0.548160 | 8.2:+70376667 | None:intergenic |
AATGGATGATAGGCAATCAT+GGG | 0.552039 | 8.2:-70376203 | MS.gene85967:CDS |
AAGTCGATTTCATCGTTGGA+TGG | 0.552935 | 8.2:-70376427 | MS.gene85967:CDS |
TGTGCCGAATATTTCCAAGA+TGG | 0.560772 | 8.2:-70375738 | MS.gene85967:CDS |
ATTGGACCGTGTGACCGATA+CGG | 0.561637 | 8.2:-70376743 | MS.gene85967:CDS |
AATGCAGCTGAGCTAGCAAA+CGG | 0.565987 | 8.2:-70376055 | MS.gene85967:CDS |
CTTGGCCTCCTATCATCGGA+GGG | 0.566577 | 8.2:+70375872 | None:intergenic |
GCAGAAAGCCAGCAAATGGA+AGG | 0.566807 | 8.2:-70375841 | MS.gene85967:CDS |
CCTTGGCCTCCTATCATCGG+AGG | 0.567260 | 8.2:+70375871 | None:intergenic |
TAATAATCATAGTAGAGTTG+AGG | 0.568424 | 8.2:-70376302 | MS.gene85967:CDS |
CTGAGCTAGCAAACGGTGTG+AGG | 0.568947 | 8.2:-70376048 | MS.gene85967:CDS |
TTCTAGAGATGGATCATCAT+CGG | 0.575066 | 8.2:-70375618 | MS.gene85967:CDS |
TTGAGGATGAAGATTGAAGT+GGG | 0.584907 | 8.2:-70377183 | None:intergenic |
CTAGTCCCTCCGATGATAGG+AGG | 0.585538 | 8.2:-70375877 | MS.gene85967:CDS |
TTTCGGGCAGGATTTGAACT+CGG | 0.588089 | 8.2:-70376260 | MS.gene85967:CDS |
ATGGTGTTCAGGGTTCAAGT+TGG | 0.593722 | 8.2:-70376144 | MS.gene85967:CDS |
TCTGCCTCCACATGATTGAG+GGG | 0.599597 | 8.2:+70375812 | None:intergenic |
GTGTTGTAGGGAACCTAAAG+AGG | 0.602831 | 8.2:-70376896 | MS.gene85967:CDS |
TAATTCCATTCCCATTCGGA+CGG | 0.603735 | 8.2:+70376176 | None:intergenic |
AAGAAAGAACATCTCCGTAT+CGG | 0.609322 | 8.2:+70376729 | None:intergenic |
TCAACAACACCTAAATCAGT+AGG | 0.611590 | 8.2:+70376541 | None:intergenic |
CCTCCGATGATAGGAGGCCA+AGG | 0.615234 | 8.2:-70375871 | MS.gene85967:CDS |
AGGTTCCGAGCAGCTGACAA+AGG | 0.619745 | 8.2:-70375372 | MS.gene85967:CDS |
GTTCAGGGTTCAAGTTGGAG+AGG | 0.625845 | 8.2:-70376139 | MS.gene85967:CDS |
ACAAGATGGAGTTATCGTAA+AGG | 0.628284 | 8.2:-70375528 | MS.gene85967:CDS |
CCAACAATTGATCTCACTGA+AGG | 0.629626 | 8.2:+70375947 | None:intergenic |
TCAAGCAAAACTCAAGACGA+TGG | 0.633732 | 8.2:-70375669 | MS.gene85967:CDS |
AAGCTCGTTGATGTAAGCAA+TGG | 0.643072 | 8.2:+70375691 | None:intergenic |
AAGTTTCTCCCGAAAATGTG+TGG | 0.644313 | 8.2:+70376237 | None:intergenic |
GGTAGAACCCCTCAATCATG+TGG | 0.644553 | 8.2:-70375819 | MS.gene85967:CDS |
GTGACTTAATTATGAATGTG+TGG | 0.646250 | 8.2:+70375396 | None:intergenic |
AGGAAAAGGAACAGAATTTG+GGG | 0.646477 | 8.2:-70376873 | MS.gene85967:CDS |
ACATCTCCGTATCGGTCACA+CGG | 0.649933 | 8.2:+70376737 | None:intergenic |
GATAGGAGGCCAAGGAAACG+TGG | 0.651587 | 8.2:-70375863 | MS.gene85967:CDS |
TTTGAGGATGAAGATTGAAG+TGG | 0.652782 | 8.2:-70377184 | None:intergenic |
TCAACAACTATCAACAGCAA+CGG | 0.665554 | 8.2:-70376012 | MS.gene85967:CDS |
GGAGAGGTAGTCAAGTTGTG+AGG | 0.666503 | 8.2:-70376123 | MS.gene85967:CDS |
TTGTAGGGAACCTAAAGAGG+AGG | 0.672145 | 8.2:-70376893 | MS.gene85967:CDS |
TGTTGAAGCTTCTTGCAGGG+AGG | 0.673213 | 8.2:-70375906 | MS.gene85967:CDS |
TCAATCATGTGGAGGCAGAG+AGG | 0.677489 | 8.2:-70375808 | MS.gene85967:CDS |
AGAACCCCTCAATCATGTGG+AGG | 0.677611 | 8.2:-70375816 | MS.gene85967:CDS |
GATGATAGGCAATCATGGGG+AGG | 0.677666 | 8.2:-70376199 | MS.gene85967:CDS |
CAGAAAGCCAGCAAATGGAA+GGG | 0.688128 | 8.2:-70375840 | MS.gene85967:CDS |
ACATTCATAATTAAGTCACA+AGG | 0.691255 | 8.2:-70375392 | MS.gene85967:CDS |
TCTCACTGAAGGTCTCGATG+TGG | 0.695158 | 8.2:+70375958 | None:intergenic |
ATGGATGATAGGCAATCATG+GGG | 0.703008 | 8.2:-70376202 | MS.gene85967:CDS |
ATAATCATAGTAGAGTTGAG+GGG | 0.723398 | 8.2:-70376300 | MS.gene85967:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAACAATAGTAATAATAA+TGG | - | chr8.2:70376153-70376172 | MS.gene85967:CDS | 15.0% |
!!! | TGTTAATGCTTTTGATTATT+TGG | - | chr8.2:70375405-70375424 | MS.gene85967:CDS | 20.0% |
! | AATAATCATAGTAGAGTTGA+GGG | - | chr8.2:70376204-70376223 | MS.gene85967:CDS | 25.0% |
! | ACATTCATAATTAAGTCACA+AGG | - | chr8.2:70377113-70377132 | MS.gene85967:CDS | 25.0% |
! | ATGAAAAACAACAAAGAATG+AGG | - | chr8.2:70375674-70375693 | MS.gene85967:CDS | 25.0% |
! | GAAAAATCAATTTGCATTTG+TGG | + | chr8.2:70376522-70376541 | None:intergenic | 25.0% |
! | TAATAATCATAGTAGAGTTG+AGG | - | chr8.2:70376203-70376222 | MS.gene85967:CDS | 25.0% |
!! | ATGTATTTCTCTTTTCCTAA+TGG | - | chr8.2:70375805-70375824 | MS.gene85967:CDS | 25.0% |
!!! | AATGGAATTAGTTTTCCAAA+TGG | - | chr8.2:70376342-70376361 | MS.gene85967:CDS | 25.0% |
!!! | CAAATGCAAATTGATTTTTC+AGG | - | chr8.2:70376522-70376541 | MS.gene85967:CDS | 25.0% |
!!! | CTTTTTCTTGTTTGAAAGTT+GGG | - | chr8.2:70376121-70376140 | MS.gene85967:CDS | 25.0% |
!!! | TTTTTCTTGTTTGAAAGTTG+GGG | - | chr8.2:70376122-70376141 | MS.gene85967:CDS | 25.0% |
AAACTAATTCCATTCCCATT+CGG | + | chr8.2:70376336-70376355 | None:intergenic | 30.0% | |
ATAATCATAGTAGAGTTGAG+GGG | - | chr8.2:70376205-70376224 | MS.gene85967:CDS | 30.0% | |
CCAACTTTCAAACAAGAAAA+AGG | + | chr8.2:70376123-70376142 | None:intergenic | 30.0% | |
CTATTAGGAAAATGGATGAT+AGG | - | chr8.2:70376292-70376311 | MS.gene85967:CDS | 30.0% | |
GAATGAAGATGAAAAAGCTA+TGG | - | chr8.2:70375366-70375385 | MS.gene85967:CDS | 30.0% | |
GTGACTTAATTATGAATGTG+TGG | + | chr8.2:70377112-70377131 | None:intergenic | 30.0% | |
TTGTCCATCTTGGAAATATT+CGG | + | chr8.2:70376774-70376793 | None:intergenic | 30.0% | |
! | AGAATCTTTTGACAGCAATT+GGG | - | chr8.2:70375449-70375468 | MS.gene85967:CDS | 30.0% |
! | GATGATGACAATTATGCTTT+TGG | - | chr8.2:70375739-70375758 | MS.gene85967:CDS | 30.0% |
! | TGACAATTATGCTTTTGGAT+TGG | - | chr8.2:70375744-70375763 | MS.gene85967:CDS | 30.0% |
!! | CCTTTTTCTTGTTTGAAAGT+TGG | - | chr8.2:70376120-70376139 | MS.gene85967:CDS | 30.0% |
!! | GAAACTTGCTATTAGGAAAA+TGG | - | chr8.2:70376284-70376303 | MS.gene85967:CDS | 30.0% |
!! | GATTTAGGTGTTGTTGAATT+GGG | - | chr8.2:70375970-70375989 | MS.gene85967:CDS | 30.0% |
!! | TAGCTCTGATTATTGTGTTA+GGG | - | chr8.2:70375897-70375916 | MS.gene85967:CDS | 30.0% |
!! | TGATTTAGGTGTTGTTGAAT+TGG | - | chr8.2:70375969-70375988 | MS.gene85967:CDS | 30.0% |
!!! | GTTGGAATTATGCGATTTTT+TGG | - | chr8.2:70375536-70375555 | MS.gene85967:CDS | 30.0% |
!!! | GTTTTAGTTCCTACTGATTT+AGG | - | chr8.2:70375955-70375974 | MS.gene85967:CDS | 30.0% |
!!! | TTATTGTGTTAGGGCTTTTT+TGG | - | chr8.2:70375906-70375925 | MS.gene85967:CDS | 30.0% |
AAATGGATGATAGGCAATCA+TGG | - | chr8.2:70376301-70376320 | MS.gene85967:CDS | 35.0% | |
AAGAAAGAACATCTCCGTAT+CGG | + | chr8.2:70375779-70375798 | None:intergenic | 35.0% | |
AATGGATGATAGGCAATCAT+GGG | - | chr8.2:70376302-70376321 | MS.gene85967:CDS | 35.0% | |
ACAAGATGGAGTTATCGTAA+AGG | - | chr8.2:70376977-70376996 | MS.gene85967:CDS | 35.0% | |
AGGAAAAGGAACAGAATTTG+GGG | - | chr8.2:70375632-70375651 | MS.gene85967:CDS | 35.0% | |
CGAATTTCTCAGTCAAAGTT+TGG | - | chr8.2:70375559-70375578 | MS.gene85967:CDS | 35.0% | |
CTAACGTTTCGAATTTCAGT+TGG | - | chr8.2:70375518-70375537 | MS.gene85967:CDS | 35.0% | |
GAGGAAAAGGAACAGAATTT+GGG | - | chr8.2:70375631-70375650 | MS.gene85967:CDS | 35.0% | |
GTTTAGGAGGAAATAGGTTA+TGG | - | chr8.2:70375344-70375363 | MS.gene85967:CDS | 35.0% | |
TCAACAACACCTAAATCAGT+AGG | + | chr8.2:70375967-70375986 | None:intergenic | 35.0% | |
TCAACAACTATCAACAGCAA+CGG | - | chr8.2:70376493-70376512 | MS.gene85967:CDS | 35.0% | |
TGAAGATGAAAAAGCTATGG+TGG | - | chr8.2:70375369-70375388 | MS.gene85967:CDS | 35.0% | |
TTGGGTTCTGTTAGAATTGT+TGG | - | chr8.2:70375988-70376007 | MS.gene85967:CDS | 35.0% | |
! | AACACAATCATCGTTTGCTA+GGG | - | chr8.2:70376053-70376072 | MS.gene85967:CDS | 35.0% |
! | AGTTTTCCAAATGGTGTTCA+GGG | - | chr8.2:70376351-70376370 | MS.gene85967:CDS | 35.0% |
! | ATGAAGATTGAAGTGGGTTT+AGG | - | chr8.2:70375328-70375347 | MS.gene85967:CDS | 35.0% |
! | ATGGACAAAGCATCTTTGTT+AGG | - | chr8.2:70376786-70376805 | MS.gene85967:CDS | 35.0% |
! | ATTGGAGTTCCCAAGATTTT+CGG | - | chr8.2:70376228-70376247 | MS.gene85967:CDS | 35.0% |
! | CTATAAGGAGTTGGTTTCTT+TGG | + | chr8.2:70377180-70377199 | None:intergenic | 35.0% |
! | GAGAATCTTTTGACAGCAAT+TGG | - | chr8.2:70375448-70375467 | MS.gene85967:CDS | 35.0% |
! | GAGATCAATTGTTGGTGAAT+CGG | - | chr8.2:70376566-70376585 | MS.gene85967:CDS | 35.0% |
! | TAGTTTTCCAAATGGTGTTC+AGG | - | chr8.2:70376350-70376369 | MS.gene85967:CDS | 35.0% |
! | TCAGTCAAAGTTTGGTGATT+GGG | - | chr8.2:70375567-70375586 | MS.gene85967:CDS | 35.0% |
! | TTCTAGAGATGGATCATCAT+CGG | - | chr8.2:70376887-70376906 | MS.gene85967:CDS | 35.0% |
!! | AAGTTTGGTGATTGGGTTTT+AGG | - | chr8.2:70375574-70375593 | MS.gene85967:CDS | 35.0% |
!! | GTAGCTCTGATTATTGTGTT+AGG | - | chr8.2:70375896-70375915 | MS.gene85967:CDS | 35.0% |
!! | TTCTCTTTTCCTAATGGACA+TGG | - | chr8.2:70375811-70375830 | MS.gene85967:CDS | 35.0% |
!! | TTTCGGTGTCTTTGAATGAT+TGG | + | chr8.2:70377043-70377062 | None:intergenic | 35.0% |
!!! | GATTGGACGAGTTTTGAAAT+AGG | + | chr8.2:70377026-70377045 | None:intergenic | 35.0% |
!!! | GCTTTTTTGGCTAAATCTGT+TGG | - | chr8.2:70375919-70375938 | MS.gene85967:CDS | 35.0% |
AAATCCTGCCCGAAAATCTT+GGG | + | chr8.2:70376240-70376259 | None:intergenic | 40.0% | |
AAGCTCGTTGATGTAAGCAA+TGG | + | chr8.2:70376817-70376836 | None:intergenic | 40.0% | |
AAGTTTCTCCCGAAAATGTG+TGG | + | chr8.2:70376271-70376290 | None:intergenic | 40.0% | |
ATGGATGATAGGCAATCATG+GGG | - | chr8.2:70376303-70376322 | MS.gene85967:CDS | 40.0% | |
CAAAGATGCTTTGTCCATCT+TGG | + | chr8.2:70376784-70376803 | None:intergenic | 40.0% | |
CAACACAATCATCGTTTGCT+AGG | - | chr8.2:70376052-70376071 | MS.gene85967:CDS | 40.0% | |
CCAACAATTGATCTCACTGA+AGG | + | chr8.2:70376561-70376580 | None:intergenic | 40.0% | |
CCTTCAGTGAGATCAATTGT+TGG | - | chr8.2:70376558-70376577 | MS.gene85967:CDS | 40.0% | |
GATATTCAAGCTGCACAAGA+TGG | - | chr8.2:70376963-70376982 | MS.gene85967:CDS | 40.0% | |
GATTCCTAATTGCTCTCTCT+CGG | + | chr8.2:70376865-70376884 | None:intergenic | 40.0% | |
GCAGCTTGAATATCGATATC+AGG | + | chr8.2:70376957-70376976 | None:intergenic | 40.0% | |
GGAGGAAAAGGAACAGAATT+TGG | - | chr8.2:70375630-70375649 | MS.gene85967:CDS | 40.0% | |
TAATTCCATTCCCATTCGGA+CGG | + | chr8.2:70376332-70376351 | None:intergenic | 40.0% | |
TCAAGCAAAACTCAAGACGA+TGG | - | chr8.2:70376836-70376855 | MS.gene85967:CDS | 40.0% | |
TGATGTTGAAGCTTCTTGCA+GGG | - | chr8.2:70376596-70376615 | MS.gene85967:CDS | 40.0% | |
TGTGCCGAATATTTCCAAGA+TGG | - | chr8.2:70376767-70376786 | MS.gene85967:CDS | 40.0% | |
! | AAGATTGAAGTGGGTTTAGG+AGG | - | chr8.2:70375331-70375350 | MS.gene85967:CDS | 40.0% |
! | AAGTCGATTTCATCGTTGGA+TGG | - | chr8.2:70376078-70376097 | MS.gene85967:CDS | 40.0% |
! | AAGTGGGTTTAGGAGGAAAT+AGG | - | chr8.2:70375338-70375357 | MS.gene85967:CDS | 40.0% |
! | CAGGTAAGTGTTTTGCATCT+GGG | - | chr8.2:70375839-70375858 | MS.gene85967:CDS | 40.0% |
! | CTCAGTCAAAGTTTGGTGAT+TGG | - | chr8.2:70375566-70375585 | MS.gene85967:CDS | 40.0% |
! | GCTATGGTGGTTGAAGTTTT+AGG | - | chr8.2:70375382-70375401 | MS.gene85967:CDS | 40.0% |
! | GGTTAAGTCGATTTCATCGT+TGG | - | chr8.2:70376074-70376093 | MS.gene85967:CDS | 40.0% |
! | TGTTCCTTTTCCTCCTCTTT+AGG | + | chr8.2:70375625-70375644 | None:intergenic | 40.0% |
! | TTAGGAATCGCTTCTAGAGA+TGG | - | chr8.2:70376876-70376895 | MS.gene85967:CDS | 40.0% |
! | TTGGAGTTCCCAAGATTTTC+GGG | - | chr8.2:70376229-70376248 | MS.gene85967:CDS | 40.0% |
!! | CGACTCAACGATATCGATTT+CGG | + | chr8.2:70377060-70377079 | None:intergenic | 40.0% |
!! | TCTTTTCCTAATGGACATGG+TGG | - | chr8.2:70375814-70375833 | MS.gene85967:CDS | 40.0% |
!! | TTCGGGAGAAACTTGCTATT+AGG | - | chr8.2:70376277-70376296 | MS.gene85967:CDS | 40.0% |
!!! | TGGTGATTGGGTTTTAGGTT+GGG | - | chr8.2:70375579-70375598 | MS.gene85967:CDS | 40.0% |
!!! | TTGGTGATTGGGTTTTAGGT+TGG | - | chr8.2:70375578-70375597 | MS.gene85967:CDS | 40.0% |
!!! | TTTTCTGCTCTAGAGTTTGC+TGG | + | chr8.2:70376918-70376937 | None:intergenic | 40.0% |
AAGCTTCATGCGACATTTGG+TGG | - | chr8.2:70375712-70375731 | MS.gene85967:CDS | 45.0% | |
AATGCAGCTGAGCTAGCAAA+CGG | - | chr8.2:70376450-70376469 | MS.gene85967:CDS | 45.0% | |
ATGGTGTTCAGGGTTCAAGT+TGG | - | chr8.2:70376361-70376380 | MS.gene85967:CDS | 45.0% | |
CAAATCCTGCCCGAAAATCT+TGG | + | chr8.2:70376241-70376260 | None:intergenic | 45.0% | |
CAGAAAGCCAGCAAATGGAA+GGG | - | chr8.2:70376665-70376684 | MS.gene85967:CDS | 45.0% | |
CAGAAGCTTCATGCGACATT+TGG | - | chr8.2:70375709-70375728 | MS.gene85967:CDS | 45.0% | |
CATAGTAGAGTTGAGGGGAT+TGG | - | chr8.2:70376210-70376229 | MS.gene85967:CDS | 45.0% | |
CCAGATGCAAAACACTTACC+TGG | + | chr8.2:70375841-70375860 | None:intergenic | 45.0% | |
CTAGGAGCAAAAACATCGAC+AGG | + | chr8.2:70376417-70376436 | None:intergenic | 45.0% | |
CTCGTAATGCGTAAAAACGC+TGG | + | chr8.2:70376743-70376762 | None:intergenic | 45.0% | |
CTGATGTTGAAGCTTCTTGC+AGG | - | chr8.2:70376595-70376614 | MS.gene85967:CDS | 45.0% | |
CTTGAACCCTGAACACCATT+TGG | + | chr8.2:70376360-70376379 | None:intergenic | 45.0% | |
GAATCCGAGAGAGAGCAATT+AGG | - | chr8.2:70376858-70376877 | MS.gene85967:CDS | 45.0% | |
GGAACCTAAAGAGGAGGAAA+AGG | - | chr8.2:70375618-70375637 | MS.gene85967:CDS | 45.0% | |
GTGTTGTAGGGAACCTAAAG+AGG | - | chr8.2:70375609-70375628 | MS.gene85967:CDS | 45.0% | |
TTGTAGGGAACCTAAAGAGG+AGG | - | chr8.2:70375612-70375631 | MS.gene85967:CDS | 45.0% | |
TTTCCTTGGCCTCCTATCAT+CGG | + | chr8.2:70376640-70376659 | None:intergenic | 45.0% | |
TTTCGGGCAGGATTTGAACT+CGG | - | chr8.2:70376245-70376264 | MS.gene85967:CDS | 45.0% | |
! | CCAGGTAAGTGTTTTGCATC+TGG | - | chr8.2:70375838-70375857 | MS.gene85967:CDS | 45.0% |
! | CTTTTGACAGCAATTGGGAG+TGG | - | chr8.2:70375454-70375473 | MS.gene85967:CDS | 45.0% |
! | TGAACTCGGCCACACATTTT+CGG | - | chr8.2:70376259-70376278 | MS.gene85967:CDS | 45.0% |
!! | CTGTCGATGTTTTTGCTCCT+AGG | - | chr8.2:70376415-70376434 | MS.gene85967:CDS | 45.0% |
!! | TTGCATCTGGGAAGCATTTG+TGG | - | chr8.2:70375851-70375870 | MS.gene85967:CDS | 45.0% |
!!! | GGTGATTGGGTTTTAGGTTG+GGG | - | chr8.2:70375580-70375599 | MS.gene85967:CDS | 45.0% |
AGAACCCCTCAATCATGTGG+AGG | - | chr8.2:70376689-70376708 | MS.gene85967:CDS | 50.0% | |
ATCCTAGTCCCTCCGATGAT+AGG | - | chr8.2:70376625-70376644 | MS.gene85967:CDS | 50.0% | |
ATTGGACCGTGTGACCGATA+CGG | - | chr8.2:70375762-70375781 | MS.gene85967:CDS | 50.0% | |
CTCTGCCTCCACATGATTGA+GGG | + | chr8.2:70376697-70376716 | None:intergenic | 50.0% | |
CTTCTCCTTTGTCAGCTGCT+CGG | + | chr8.2:70377141-70377160 | None:intergenic | 50.0% | |
GATGATAGGCAATCATGGGG+AGG | - | chr8.2:70376306-70376325 | MS.gene85967:CDS | 50.0% | |
GCAGAAAGCCAGCAAATGGA+AGG | - | chr8.2:70376664-70376683 | MS.gene85967:CDS | 50.0% | |
GGTAGAACCCCTCAATCATG+TGG | - | chr8.2:70376686-70376705 | MS.gene85967:CDS | 50.0% | |
GGTTCTACCCTTCCATTTGC+TGG | + | chr8.2:70376675-70376694 | None:intergenic | 50.0% | |
TCAATCATGTGGAGGCAGAG+AGG | - | chr8.2:70376697-70376716 | MS.gene85967:CDS | 50.0% | |
TCAGCTGCATTGCTCGATGA+AGG | + | chr8.2:70376441-70376460 | None:intergenic | 50.0% | |
TCTCACTGAAGGTCTCGATG+TGG | + | chr8.2:70376550-70376569 | None:intergenic | 50.0% | |
TCTCTGCCTCCACATGATTG+AGG | + | chr8.2:70376698-70376717 | None:intergenic | 50.0% | |
TCTGCCTCCACATGATTGAG+GGG | + | chr8.2:70376696-70376715 | None:intergenic | 50.0% | |
TGTTGAAGCTTCTTGCAGGG+AGG | - | chr8.2:70376599-70376618 | MS.gene85967:CDS | 50.0% | |
! | ACATCTCCGTATCGGTCACA+CGG | + | chr8.2:70375771-70375790 | None:intergenic | 50.0% |
! | GAACTCGGCCACACATTTTC+GGG | - | chr8.2:70376260-70376279 | MS.gene85967:CDS | 50.0% |
! | GGAGAGGTAGTCAAGTTGTG+AGG | - | chr8.2:70376382-70376401 | MS.gene85967:CDS | 50.0% |
! | TTGGGGAGATGGGTGTTGTA+GGG | - | chr8.2:70375597-70375616 | MS.gene85967:CDS | 50.0% |
!! | AGTTCCCAAGATTTTCGGGC+AGG | - | chr8.2:70376233-70376252 | MS.gene85967:CDS | 50.0% |
!! | GTTCAGGGTTCAAGTTGGAG+AGG | - | chr8.2:70376366-70376385 | MS.gene85967:CDS | 50.0% |
!!! | GGGTTTTAGGTTGGGGAGAT+GGG | - | chr8.2:70375587-70375606 | MS.gene85967:CDS | 50.0% |
!!! | TGGGTTTTAGGTTGGGGAGA+TGG | - | chr8.2:70375586-70375605 | MS.gene85967:CDS | 50.0% |
AGGTTCCGAGCAGCTGACAA+AGG | - | chr8.2:70377133-70377152 | MS.gene85967:CDS | 55.0% | |
CCTGGTCCACCATGTCCATT+AGG | + | chr8.2:70375823-70375842 | None:intergenic | 55.0% | |
CGTGGCAGAAAGCCAGCAAA+TGG | - | chr8.2:70376660-70376679 | MS.gene85967:CDS | 55.0% | |
CTAGTCCCTCCGATGATAGG+AGG | - | chr8.2:70376628-70376647 | MS.gene85967:CDS | 55.0% | |
CTCCTATCATCGGAGGGACT+AGG | + | chr8.2:70376630-70376649 | None:intergenic | 55.0% | |
CTGAGCTAGCAAACGGTGTG+AGG | - | chr8.2:70376457-70376476 | MS.gene85967:CDS | 55.0% | |
CTTGGCCTCCTATCATCGGA+GGG | + | chr8.2:70376636-70376655 | None:intergenic | 55.0% | |
GATAGGAGGCCAAGGAAACG+TGG | - | chr8.2:70376642-70376661 | MS.gene85967:CDS | 55.0% | |
GCATTGCTCGATGAAGGCCT+AGG | + | chr8.2:70376435-70376454 | None:intergenic | 55.0% | |
GGCTTTCTGCCACGTTTCCT+TGG | + | chr8.2:70376654-70376673 | None:intergenic | 55.0% | |
! | GTTGGGGAGATGGGTGTTGT+AGG | - | chr8.2:70375596-70375615 | MS.gene85967:CDS | 55.0% |
!! | CCTAATGGACATGGTGGACC+AGG | - | chr8.2:70375820-70375839 | MS.gene85967:CDS | 55.0% |
CCTCCGATGATAGGAGGCCA+AGG | - | chr8.2:70376634-70376653 | MS.gene85967:CDS | 60.0% | |
CCTTGGCCTCCTATCATCGG+AGG | + | chr8.2:70376637-70376656 | None:intergenic | 60.0% | |
CATGGGGAGGCCGTCCGAAT+GGG | - | chr8.2:70376319-70376338 | MS.gene85967:CDS | 65.0% | |
GGAGGCCGTCCGAATGGGAA+TGG | - | chr8.2:70376324-70376343 | MS.gene85967:CDS | 65.0% | |
TCATGGGGAGGCCGTCCGAA+TGG | - | chr8.2:70376318-70376337 | MS.gene85967:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 70375328 | 70377199 | 70375328 | ID=MS.gene85967 |
chr8.2 | mRNA | 70375328 | 70377199 | 70375328 | ID=MS.gene85967.t1;Parent=MS.gene85967 |
chr8.2 | exon | 70375328 | 70377199 | 70375328 | ID=MS.gene85967.t1.exon1;Parent=MS.gene85967.t1 |
chr8.2 | CDS | 70375328 | 70377199 | 70375328 | ID=cds.MS.gene85967.t1;Parent=MS.gene85967.t1 |
Gene Sequence |
Protein sequence |