Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86258.t1 | RHN76790.1 | 91.8 | 716 | 58 | 1 | 1 | 716 | 4 | 718 | 0.00E+00 | 1179.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86258.t1 | Q9FKG6 | 37.2 | 688 | 401 | 9 | 6 | 671 | 84 | 762 | 7.0e-101 | 369.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86258.t1 | A0A396JF31 | 91.8 | 716 | 58 | 1 | 1 | 716 | 4 | 718 | 0.0e+00 | 1179.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene86258 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene86258 | 0.800605 | 1.33E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene86258 | 0.804991 | 1.66E-49 | -1.69E-46 |
| MS.gene05925 | MS.gene86258 | 0.810306 | 1.23E-50 | -1.69E-46 |
| MS.gene059458 | MS.gene86258 | 0.895467 | 9.32E-76 | -1.69E-46 |
| MS.gene059459 | MS.gene86258 | 0.939635 | 9.12E-100 | -1.69E-46 |
| MS.gene059460 | MS.gene86258 | 0.985919 | 4.35E-165 | -1.69E-46 |
| MS.gene059584 | MS.gene86258 | 0.81208 | 5.07E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene86258 | 0.820976 | 5.16E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 165 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGTGAGTGCTTCTTTAC+AGG | 0.151575 | 1.3:+10858238 | None:intergenic |
| CTTCTTCTAATTTCCATCTT+TGG | 0.173618 | 1.3:+10858106 | None:intergenic |
| GCAATTGAGCATTTGGTTCT+AGG | 0.189630 | 1.3:-10860768 | MS.gene86258:CDS |
| AGTTCTTCACTTCCTTATTC+AGG | 0.203502 | 1.3:-10856435 | MS.gene86258:CDS |
| GCAAGATGTTTGCCGGTTTA+AGG | 0.207578 | 1.3:+10857079 | None:intergenic |
| TTTAAAATTGCAGCTGAAAT+AGG | 0.219421 | 1.3:-10857156 | MS.gene86258:CDS |
| CGCGCACAAAAGACGCGATA+TGG | 0.274810 | 1.3:+10861040 | None:intergenic |
| AGCTTTGAGTCAAACAATTA+TGG | 0.281142 | 1.3:-10859064 | MS.gene86258:CDS |
| AGGTTATGCCTGAACTTAAT+AGG | 0.291367 | 1.3:-10856672 | MS.gene86258:CDS |
| AAAGAAAAGTAGTGGATTCT+TGG | 0.309455 | 1.3:-10857906 | MS.gene86258:CDS |
| TGAAATGAGAAGACTGAAAT+TGG | 0.311394 | 1.3:-10858294 | MS.gene86258:CDS |
| TCAATCAGCAATTGAGCATT+TGG | 0.318952 | 1.3:-10860775 | MS.gene86258:CDS |
| ATATGGACGGAAAATTTCTT+TGG | 0.323691 | 1.3:+10861057 | None:intergenic |
| CGGTCAAGCAAGATGTTTGC+CGG | 0.327735 | 1.3:+10857072 | None:intergenic |
| GGAAGAAGGTCTATTGATAT+TGG | 0.341670 | 1.3:-10859043 | MS.gene86258:CDS |
| AGTATATTCAATTAATGCTT+TGG | 0.359907 | 1.3:+10860800 | None:intergenic |
| CTAGTGGCTCAGGTTTAGTT+TGG | 0.360773 | 1.3:+10857112 | None:intergenic |
| GCACATGGCGAACGGAAGTT+TGG | 0.365351 | 1.3:-10857232 | MS.gene86258:CDS |
| TAAACAAGGCAGCCGTATTC+CGG | 0.369155 | 1.3:+10857258 | None:intergenic |
| GCTACTGGCACACGAGGTTC+TGG | 0.370652 | 1.3:+10860173 | None:intergenic |
| ACCTTCTATACCTCACATCT+TGG | 0.375413 | 1.3:+10857878 | None:intergenic |
| GAGACTTGGCTCTGAGTAGA+AGG | 0.376136 | 1.3:+10856592 | None:intergenic |
| ATTTCTTTGGTATGTTCATC+AGG | 0.376497 | 1.3:+10861070 | None:intergenic |
| TCTCCATATGACCTATCATT+TGG | 0.377873 | 1.3:+10859247 | None:intergenic |
| TGCATTGGCTGTAGCAGAAA+TGG | 0.379336 | 1.3:-10858046 | MS.gene86258:CDS |
| CTTTAACTGCGACAGGAGTA+TGG | 0.380864 | 1.3:+10857758 | None:intergenic |
| AAGATTGGAGAAGGTGGTTA+TGG | 0.387056 | 1.3:-10857805 | MS.gene86258:CDS |
| TTCGCTGAGTCACTTAAGAT+TGG | 0.387509 | 1.3:-10857820 | MS.gene86258:CDS |
| CTTGTGCTATCCCCTGAATA+AGG | 0.392494 | 1.3:+10856423 | None:intergenic |
| TCTCTTAACCTATTAAGTTC+AGG | 0.394739 | 1.3:+10856664 | None:intergenic |
| AAAGATTAGTGATGTTGGTT+TGG | 0.398685 | 1.3:-10857037 | MS.gene86258:CDS |
| GTGGCTCAGGTTTAGTTTGG+TGG | 0.399698 | 1.3:+10857115 | None:intergenic |
| GACCTTCCTTGTTGTGCATC+AGG | 0.411227 | 1.3:+10857727 | None:intergenic |
| GGTTTGCTCAGATGGCTATA+AGG | 0.414504 | 1.3:-10856738 | MS.gene86258:CDS |
| ATTCCAACAACTGTATCAAA+AGG | 0.421576 | 1.3:-10860329 | MS.gene86258:CDS |
| ATTAGAAGAAGAGAGGAGAT+TGG | 0.422286 | 1.3:-10858094 | MS.gene86258:CDS |
| TCTTTCTCATTTGATAGTGA+TGG | 0.425484 | 1.3:-10859004 | MS.gene86258:CDS |
| CCCTCAAATGACTTCCTCTC+AGG | 0.426079 | 1.3:+10860039 | None:intergenic |
| GCGAATAAACGATCTGTACT+TGG | 0.426324 | 1.3:+10859175 | None:intergenic |
| ATCTAACCTTTAGTTGCTAC+TGG | 0.426629 | 1.3:+10860158 | None:intergenic |
| TCTAGAAGGCATTTATAAAC+AGG | 0.426929 | 1.3:+10857781 | None:intergenic |
| ACAAAAGATATGTCACCTTC+TGG | 0.427770 | 1.3:+10859214 | None:intergenic |
| GGCTATGGGGTTTGCTCAGA+TGG | 0.435310 | 1.3:-10856746 | MS.gene86258:CDS |
| AAGATGGGATGGAATCATTC+AGG | 0.436918 | 1.3:-10859999 | MS.gene86258:intron |
| ATCTATATAACAAAATGTTC+CGG | 0.444619 | 1.3:+10856954 | None:intergenic |
| GTTCTTCACTTCCTTATTCA+GGG | 0.446397 | 1.3:-10856434 | MS.gene86258:CDS |
| ACAGTATATATTGTTGGTAA+AGG | 0.447863 | 1.3:-10860290 | MS.gene86258:CDS |
| AGTCAAACAATTATGGAAGA+AGG | 0.447897 | 1.3:-10859057 | MS.gene86258:CDS |
| ACCAAGATGTGAGGTATAGA+AGG | 0.448907 | 1.3:-10857879 | MS.gene86258:CDS |
| TTGAGGTATTAAGTTGCATA+AGG | 0.449307 | 1.3:-10857314 | MS.gene86258:CDS |
| CGACAGGAGTATGGTCTAGA+AGG | 0.449880 | 1.3:+10857767 | None:intergenic |
| AACCCCATAGCCTCTTCAAC+TGG | 0.452405 | 1.3:+10856757 | None:intergenic |
| CGTCCAAATGATAGGTCATA+TGG | 0.454121 | 1.3:-10859250 | MS.gene86258:CDS |
| CCTAGGAGGAGAACCATGTT+TGG | 0.455194 | 1.3:+10857288 | None:intergenic |
| AACCTTAGCTGCCAAGGTAG+TGG | 0.460718 | 1.3:+10857177 | None:intergenic |
| TTCTGATATCAGAAGGTTCA+AGG | 0.467872 | 1.3:-10860360 | MS.gene86258:intron |
| AGAGGAGATTGGAGGAAGCA+AGG | 0.469616 | 1.3:-10858083 | MS.gene86258:CDS |
| CCAAACATGGTTCTCCTCCT+AGG | 0.471266 | 1.3:-10857288 | MS.gene86258:CDS |
| CCTGAGAGGAAGTCATTTGA+GGG | 0.471329 | 1.3:-10860039 | MS.gene86258:CDS |
| TCTCTATGTACTAGTGGCTC+AGG | 0.472238 | 1.3:+10857102 | None:intergenic |
| TTGGCCAGTTGAAGAGGCTA+TGG | 0.473090 | 1.3:-10856761 | MS.gene86258:CDS |
| GGGAACATTTAGTGAGATGT+TGG | 0.474548 | 1.3:-10856800 | MS.gene86258:CDS |
| AACTTAGTCAATCTAGTGTA+AGG | 0.477099 | 1.3:-10860205 | MS.gene86258:CDS |
| TTCCAACAACTGTATCAAAA+GGG | 0.478467 | 1.3:-10860328 | MS.gene86258:CDS |
| ACCCACTACCTTGGCAGCTA+AGG | 0.482705 | 1.3:-10857179 | MS.gene86258:CDS |
| CTAGGAGACGTCCAAATGAT+AGG | 0.483797 | 1.3:-10859258 | MS.gene86258:CDS |
| CGTATTCCGGACAGGCTCCT+AGG | 0.484833 | 1.3:+10857271 | None:intergenic |
| ACTGGCCAATCTGTCAGTCT+TGG | 0.486141 | 1.3:+10856775 | None:intergenic |
| TACCAACAGACAGGAATGTT+GGG | 0.487581 | 1.3:-10856925 | MS.gene86258:CDS |
| AATGAGAAAGATGAGTGATC+AGG | 0.490375 | 1.3:+10859016 | None:intergenic |
| ATTCCTGTCTGTTGGTACTC+AGG | 0.491283 | 1.3:+10856931 | None:intergenic |
| ATAACCTCTTTACCAAGATC+AGG | 0.492036 | 1.3:+10856688 | None:intergenic |
| TAAGGTGTGCTGAGTTAAGA+AGG | 0.500093 | 1.3:-10856720 | MS.gene86258:CDS |
| AGAAGAGAAAAGAAAAGTAG+TGG | 0.501185 | 1.3:-10857914 | MS.gene86258:CDS |
| GTCGCAAAGATTAGTGATGT+TGG | 0.501942 | 1.3:-10857042 | MS.gene86258:CDS |
| CTCCCAACATTCCTGTCTGT+TGG | 0.502079 | 1.3:+10856923 | None:intergenic |
| AGGAAAGATAGACCTGATCT+TGG | 0.504433 | 1.3:-10856700 | MS.gene86258:CDS |
| CGGAGAACTTTAACTGCGAC+AGG | 0.504843 | 1.3:+10857751 | None:intergenic |
| TTTGACAGCAAGACCACCAA+TGG | 0.511805 | 1.3:-10856857 | MS.gene86258:CDS |
| CTAGGAGCCTGTCCGGAATA+CGG | 0.515301 | 1.3:-10857270 | MS.gene86258:CDS |
| GGCTGTAGCAGAAATGGAAA+AGG | 0.519595 | 1.3:-10858040 | MS.gene86258:CDS |
| GAGATTGGAGGAAGCAAGGA+TGG | 0.519698 | 1.3:-10858079 | MS.gene86258:CDS |
| TCTCCTCCTAGGAGCCTGTC+CGG | 0.521340 | 1.3:-10857277 | MS.gene86258:CDS |
| ACCTGAGAGGAAGTCATTTG+AGG | 0.522835 | 1.3:-10860040 | MS.gene86258:CDS |
| AGAAGAAGAGAGGAGATTGG+AGG | 0.523850 | 1.3:-10858091 | MS.gene86258:CDS |
| TGGATCCAAGACTGACAGAT+TGG | 0.524868 | 1.3:-10856780 | MS.gene86258:CDS |
| GATGGAAATTAGAAGAAGAG+AGG | 0.526538 | 1.3:-10858101 | MS.gene86258:CDS |
| TAATCTTTGCGACGTAGTTG+CGG | 0.528387 | 1.3:+10857052 | None:intergenic |
| AGGCTGTAGAACTCCAAAGA+TGG | 0.530746 | 1.3:-10858119 | MS.gene86258:CDS |
| TGGCCAGTTGAAGAGGCTAT+GGG | 0.530876 | 1.3:-10856760 | MS.gene86258:CDS |
| TAGACCTGATCTTGGTAAAG+AGG | 0.532100 | 1.3:-10856692 | MS.gene86258:CDS |
| TATCGAATGACGTCAGCTGC+CGG | 0.536547 | 1.3:-10856973 | MS.gene86258:CDS |
| AAATCTGATATTTACTCACT+AGG | 0.536663 | 1.3:-10856898 | MS.gene86258:CDS |
| ACTATATGACAGCCTAGGGT+TGG | 0.539645 | 1.3:+10859108 | None:intergenic |
| GTATAGAAGGTATTCAATTG+AGG | 0.542017 | 1.3:-10857866 | MS.gene86258:CDS |
| TCATATAGTTCTGATACTGA+TGG | 0.544531 | 1.3:-10859094 | MS.gene86258:CDS |
| AATCTGATATTTACTCACTA+GGG | 0.545428 | 1.3:-10856897 | MS.gene86258:CDS |
| ATTGAGCAGTGTTCAGTGGT+GGG | 0.546462 | 1.3:-10861100 | MS.gene86258:CDS |
| TTGACAGCAAGACCACCAAT+GGG | 0.548929 | 1.3:-10856856 | MS.gene86258:CDS |
| CTGCCTTGTTTATGAGCACA+TGG | 0.550252 | 1.3:-10857247 | MS.gene86258:CDS |
| ACCTTAGCTGCCAAGGTAGT+GGG | 0.552221 | 1.3:+10857178 | None:intergenic |
| TCAGAACTATATGACAGCCT+AGG | 0.552705 | 1.3:+10859103 | None:intergenic |
| TTCTCTTGACCTATCAAAGA+GGG | 0.557847 | 1.3:+10856388 | None:intergenic |
| TTTGGACGTCTCCTAGTGAA+TGG | 0.558124 | 1.3:+10859265 | None:intergenic |
| GCTCAGGTTTAGTTTGGTGG+AGG | 0.558359 | 1.3:+10857118 | None:intergenic |
| GTACCAACAGACAGGAATGT+TGG | 0.559116 | 1.3:-10856926 | MS.gene86258:CDS |
| GACAGATTGGCCAGTTGAAG+AGG | 0.563539 | 1.3:-10856767 | MS.gene86258:CDS |
| CCATCTTGTGATCTACGTGT+TGG | 0.564056 | 1.3:+10860015 | None:intergenic |
| GAAACACTCACCCACTACCT+TGG | 0.565536 | 1.3:-10857188 | MS.gene86258:CDS |
| CGTGTGCCAGTAGCAACTAA+AGG | 0.566625 | 1.3:-10860164 | MS.gene86258:intron |
| TATTGAGCAGTGTTCAGTGG+TGG | 0.567523 | 1.3:-10861101 | MS.gene86258:CDS |
| TTCTTCTTCTGCATCAAATG+TGG | 0.567640 | 1.3:-10858978 | MS.gene86258:intron |
| TTCCTTGTTGTGCATCAGGA+CGG | 0.568622 | 1.3:+10857731 | None:intergenic |
| TTCTTCACTTCCTTATTCAG+GGG | 0.569283 | 1.3:-10856433 | MS.gene86258:CDS |
| AGTACATAGAGACCTTAAAC+CGG | 0.571348 | 1.3:-10857091 | MS.gene86258:CDS |
| AAGGCAGCCGTATTCCGGAC+AGG | 0.573094 | 1.3:+10857263 | None:intergenic |
| TTAAGGTCTCTATGTACTAG+TGG | 0.573774 | 1.3:+10857096 | None:intergenic |
| GATGGCTGAAGAATCTGCAT+TGG | 0.576543 | 1.3:-10858061 | MS.gene86258:CDS |
| ACTGATCTGAATTGTAGTTG+TGG | 0.576685 | 1.3:+10859140 | None:intergenic |
| GTTTATGAGCACATGGCGAA+CGG | 0.580967 | 1.3:-10857240 | MS.gene86258:CDS |
| CAGAACTATATGACAGCCTA+GGG | 0.586560 | 1.3:+10859104 | None:intergenic |
| CATTATTGAGCAGTGTTCAG+TGG | 0.587142 | 1.3:-10861104 | MS.gene86258:CDS |
| AGCACTCACAGCACAGCAGA+AGG | 0.590737 | 1.3:-10858228 | MS.gene86258:intron |
| GATCCTGAGTACCAACAGAC+AGG | 0.591898 | 1.3:-10856934 | MS.gene86258:CDS |
| CTCCGTCCTGATGCACAACA+AGG | 0.595620 | 1.3:-10857733 | MS.gene86258:CDS |
| GAGTCACTTAAGATTGGAGA+AGG | 0.595941 | 1.3:-10857814 | MS.gene86258:CDS |
| GATTGTAGAGGTGAAAATGC+AGG | 0.596107 | 1.3:+10860230 | None:intergenic |
| ACGTAGATCACAAGATGGGA+TGG | 0.598384 | 1.3:-10860010 | MS.gene86258:CDS |
| TGACTAAGTTGAGATTGTAG+AGG | 0.598773 | 1.3:+10860218 | None:intergenic |
| GAGCCAAGTCTCTCTTCAGA+TGG | 0.600572 | 1.3:-10856581 | MS.gene86258:intron |
| GTTGGTAGAGCTATTGAGAA+GGG | 0.601322 | 1.3:-10856820 | MS.gene86258:CDS |
| GTCACATTGTCTGCTACTGA+TGG | 0.602131 | 1.3:+10857000 | None:intergenic |
| ATTGCAGCTGAAATAGGCAC+AGG | 0.603026 | 1.3:-10857150 | MS.gene86258:CDS |
| TCACTTAAGATTGGAGAAGG+TGG | 0.604555 | 1.3:-10857811 | MS.gene86258:CDS |
| TTGCATAAGGCATCCAAACA+TGG | 0.606259 | 1.3:-10857301 | MS.gene86258:CDS |
| CCAACACGTAGATCACAAGA+TGG | 0.611497 | 1.3:-10860015 | MS.gene86258:CDS |
| ATTGGAGCTAAAGCAAACAA+TGG | 0.611500 | 1.3:-10858276 | MS.gene86258:CDS |
| TCCAACAACTGTATCAAAAG+GGG | 0.616048 | 1.3:-10860327 | MS.gene86258:CDS |
| TGTTGGTAGAGCTATTGAGA+AGG | 0.616167 | 1.3:-10856821 | MS.gene86258:CDS |
| ATACCATCTGAAGAGAGACT+TGG | 0.618304 | 1.3:+10856578 | None:intergenic |
| TCGCCATGTGCTCATAAACA+AGG | 0.618885 | 1.3:+10857244 | None:intergenic |
| GTCCTGATGCACAACAAGGA+AGG | 0.619203 | 1.3:-10857729 | MS.gene86258:CDS |
| CACAAAAGACGCGATATGGA+CGG | 0.622512 | 1.3:+10861044 | None:intergenic |
| TGATGTGTCAATCCCATTGG+TGG | 0.626567 | 1.3:+10856844 | None:intergenic |
| GGAGAACTTTCTATGCCAGA+AGG | 0.629667 | 1.3:-10859229 | MS.gene86258:CDS |
| ACATGATGTGTCAATCCCAT+TGG | 0.630164 | 1.3:+10856841 | None:intergenic |
| TGTTTGATAGGTACACTGCA+AGG | 0.636280 | 1.3:-10860850 | MS.gene86258:intron |
| CTTCTCTTGACCTATCAAAG+AGG | 0.638479 | 1.3:+10856387 | None:intergenic |
| GTGACAGGTCACCATTCACT+AGG | 0.639260 | 1.3:-10859276 | MS.gene86258:intron |
| CAACACGTAGATCACAAGAT+GGG | 0.639809 | 1.3:-10860014 | MS.gene86258:CDS |
| TTGAAGCTGCTGAAGCACAA+AGG | 0.641497 | 1.3:-10857999 | MS.gene86258:CDS |
| GGCCAGTTGAAGAGGCTATG+GGG | 0.651327 | 1.3:-10856759 | MS.gene86258:CDS |
| TTAGTTGCTACTGGCACACG+AGG | 0.659938 | 1.3:+10860167 | None:intergenic |
| AAGGACATTGTAGTAGAACA+TGG | 0.661359 | 1.3:-10860831 | MS.gene86258:CDS |
| AAGCTGCTGAAGCACAAAGG+AGG | 0.661543 | 1.3:-10857996 | MS.gene86258:CDS |
| GCTGCAAGTAAAGGATGATG+TGG | 0.662833 | 1.3:-10858321 | MS.gene86258:intron |
| AAGGTCACAGTTTCAACGAG+AGG | 0.663965 | 1.3:-10857710 | MS.gene86258:intron |
| ATTCCGGACAGGCTCCTAGG+AGG | 0.664682 | 1.3:+10857274 | None:intergenic |
| CTTGGACAAACCAAGATGTG+AGG | 0.668711 | 1.3:-10857888 | MS.gene86258:CDS |
| ACATTGTCTGCTACTGATGG+CGG | 0.669359 | 1.3:+10857003 | None:intergenic |
| TGTTTGTATTAGCACCTGAG+AGG | 0.669859 | 1.3:-10860053 | MS.gene86258:intron |
| ATGGGATTGACACATCATGT+TGG | 0.673505 | 1.3:-10856838 | MS.gene86258:CDS |
| GCAAGTAAAGGATGATGTGG+AGG | 0.689241 | 1.3:-10858318 | MS.gene86258:intron |
| CTGAGAGGAAGTCATTTGAG+GGG | 0.701797 | 1.3:-10860038 | MS.gene86258:CDS |
| TGATATCAGAAGGTTCAAGG+TGG | 0.750011 | 1.3:-10860357 | MS.gene86258:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAGTTTTTGTTTTTTTT+AGG | + | chr1.3:10858058-10858077 | None:intergenic | 10.0% |
| !! | AAGAATTATCTTATTGAAAA+AGG | - | chr1.3:10858607-10858626 | MS.gene86258:intron | 15.0% |
| !! | TAAATCCACTAAAAATATAA+TGG | + | chr1.3:10860888-10860907 | None:intergenic | 15.0% |
| !! | TTACTAAAAATTTATGTTTG+AGG | - | chr1.3:10856855-10856874 | MS.gene86258:CDS | 15.0% |
| !! | TTCAATTGAAAATATATAGA+AGG | + | chr1.3:10857769-10857788 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTAACAAAGTATT+AGG | + | chr1.3:10856846-10856865 | None:intergenic | 15.0% |
| !!! | GAAATGCTATTTTTTTAATA+TGG | - | chr1.3:10858669-10858688 | MS.gene86258:intron | 15.0% |
| !!! | TAGTTAATTCAACTTTTTTA+TGG | - | chr1.3:10858188-10858207 | MS.gene86258:intron | 15.0% |
| !!! | TTTTTATGGTATATCTAAAA+TGG | - | chr1.3:10858202-10858221 | MS.gene86258:intron | 15.0% |
| !! | AATATTGATATTACATGTCT+TGG | - | chr1.3:10857067-10857086 | MS.gene86258:CDS | 20.0% |
| !! | AGTATATTCAATTAATGCTT+TGG | + | chr1.3:10856708-10856727 | None:intergenic | 20.0% |
| !! | ATATATACTGTACAAAAATC+TGG | + | chr1.3:10857206-10857225 | None:intergenic | 20.0% |
| !! | ATCTATATAACAAAATGTTC+CGG | + | chr1.3:10860554-10860573 | None:intergenic | 20.0% |
| !! | TAATAATTGATGTGCAAATA+AGG | + | chr1.3:10859318-10859337 | None:intergenic | 20.0% |
| !! | TTCAATTGAAAATAGCATTT+AGG | - | chr1.3:10857779-10857798 | MS.gene86258:CDS | 20.0% |
| !!! | ACCTCTAAAGTATATAAATA+AGG | + | chr1.3:10860109-10860128 | None:intergenic | 20.0% |
| !!! | ATCTGTTTATTTTTGAACTA+GGG | - | chr1.3:10860066-10860085 | MS.gene86258:intron | 20.0% |
| !!! | TAGTTTTGTTCAATGATAAA+TGG | - | chr1.3:10859080-10859099 | MS.gene86258:CDS | 20.0% |
| !!! | TATCTGTTTATTTTTGAACT+AGG | - | chr1.3:10860065-10860084 | MS.gene86258:intron | 20.0% |
| !!! | TCCTTATTTATATACTTTAG+AGG | - | chr1.3:10860105-10860124 | MS.gene86258:intron | 20.0% |
| !!! | TCTCTTTTTATTTGTTTGAT+AGG | - | chr1.3:10856643-10856662 | MS.gene86258:CDS | 20.0% |
| !!! | TTGTCAAAAAAAAGTATGTA+TGG | - | chr1.3:10857717-10857736 | MS.gene86258:CDS | 20.0% |
| !!! | TTTTGTACAGTATATATTGT+TGG | - | chr1.3:10857209-10857228 | MS.gene86258:CDS | 20.0% |
| !!! | TTTTTAATATGGTTTCCTTA+AGG | - | chr1.3:10858680-10858699 | MS.gene86258:intron | 20.0% |
| !!! | TTTTTAGGAAAAATGTCAAT+AGG | + | chr1.3:10858043-10858062 | None:intergenic | 20.0% |
| ! | AAATCTGATATTTACTCACT+AGG | - | chr1.3:10860607-10860626 | MS.gene86258:intron | 25.0% |
| ! | AAGTTTAAACCGTTAATAGT+TGG | - | chr1.3:10860990-10861009 | MS.gene86258:intron | 25.0% |
| ! | AATCTGATATTTACTCACTA+GGG | - | chr1.3:10860608-10860627 | MS.gene86258:intron | 25.0% |
| ! | ACCAAGAATGATAAAAAAGA+AGG | + | chr1.3:10857901-10857920 | None:intergenic | 25.0% |
| ! | AGTAATCTATTGACATAGAT+CGG | + | chr1.3:10859048-10859067 | None:intergenic | 25.0% |
| ! | ATATATGCTTAACATAAGAC+AGG | + | chr1.3:10859118-10859137 | None:intergenic | 25.0% |
| ! | ATGAAATTATTGTGCATCAT+AGG | - | chr1.3:10859366-10859385 | MS.gene86258:intron | 25.0% |
| ! | CAACAGACCATTAATAAAAA+TGG | + | chr1.3:10858827-10858846 | None:intergenic | 25.0% |
| ! | CCAAGAATGATAAAAAAGAA+GGG | + | chr1.3:10857900-10857919 | None:intergenic | 25.0% |
| ! | CTGAAAGAAATATAAGAAGT+AGG | - | chr1.3:10857979-10857998 | MS.gene86258:CDS | 25.0% |
| ! | GTGATATATTTATGACACAA+CGG | - | chr1.3:10858875-10858894 | MS.gene86258:intron | 25.0% |
| ! | TATCATGAAGATTTGTCAAA+TGG | - | chr1.3:10856886-10856905 | MS.gene86258:CDS | 25.0% |
| ! | TCAATCAAACCAACTATTAA+CGG | + | chr1.3:10861002-10861021 | None:intergenic | 25.0% |
| ! | TTGAATTCTTGACACTATTT+GGG | - | chr1.3:10856555-10856574 | MS.gene86258:intron | 25.0% |
| ! | TTTGAATTCTTGACACTATT+TGG | - | chr1.3:10856554-10856573 | MS.gene86258:intron | 25.0% |
| !! | ACAGTATATATTGTTGGTAA+AGG | - | chr1.3:10857215-10857234 | MS.gene86258:CDS | 25.0% |
| !! | CAAAAATCATTTCTCTGTTT+TGG | + | chr1.3:10857558-10857577 | None:intergenic | 25.0% |
| !! | CAAATTTTTCTTGCAACATA+TGG | + | chr1.3:10858113-10858132 | None:intergenic | 25.0% |
| !! | GTAATAATTTTCAACCTTTG+TGG | - | chr1.3:10857862-10857881 | MS.gene86258:CDS | 25.0% |
| !! | TGTTTATGTTAGTTTCTTGT+GGG | + | chr1.3:10858016-10858035 | None:intergenic | 25.0% |
| !! | TTTAAAATTGCAGCTGAAAT+AGG | - | chr1.3:10860349-10860368 | MS.gene86258:CDS | 25.0% |
| !!! | CATAAATATATCACTTTTCG+AGG | + | chr1.3:10858869-10858888 | None:intergenic | 25.0% |
| !!! | GATCACCATTATATTTTTAG+TGG | - | chr1.3:10860880-10860899 | MS.gene86258:intron | 25.0% |
| !!! | TATTGATTTCTTCATCCTTA+AGG | + | chr1.3:10858698-10858717 | None:intergenic | 25.0% |
| !!! | TTTCGTGCCATTTTTATTAA+TGG | - | chr1.3:10858817-10858836 | MS.gene86258:intron | 25.0% |
| AACTTAGTCAATCTAGTGTA+AGG | - | chr1.3:10857300-10857319 | MS.gene86258:CDS | 30.0% | |
| AATAAATGCAATCATTGTGC+TGG | + | chr1.3:10858585-10858604 | None:intergenic | 30.0% | |
| AATATCAATATTGTCAACCG+CGG | + | chr1.3:10857059-10857078 | None:intergenic | 30.0% | |
| AATGCGTAAACAAGTATGTA+TGG | - | chr1.3:10857688-10857707 | MS.gene86258:intron | 30.0% | |
| AGAAGAGAAAAGAAAAGTAG+TGG | - | chr1.3:10859591-10859610 | MS.gene86258:intron | 30.0% | |
| AGATACTCAAAATAGTGTCA+AGG | + | chr1.3:10856602-10856621 | None:intergenic | 30.0% | |
| AGTCAAACAATTATGGAAGA+AGG | - | chr1.3:10858448-10858467 | MS.gene86258:intron | 30.0% | |
| AGTTGAAACAAATGTAACTG+TGG | - | chr1.3:10861021-10861040 | MS.gene86258:intron | 30.0% | |
| ATATGGACGGAAAATTTCTT+TGG | + | chr1.3:10856451-10856470 | None:intergenic | 30.0% | |
| ATCGTATACTAGAACAATAG+TGG | + | chr1.3:10856962-10856981 | None:intergenic | 30.0% | |
| ATTCCAACAACTGTATCAAA+AGG | - | chr1.3:10857176-10857195 | MS.gene86258:CDS | 30.0% | |
| ATTTCTTTGGTATGTTCATC+AGG | + | chr1.3:10856438-10856457 | None:intergenic | 30.0% | |
| CTTCTTCTAATTTCCATCTT+TGG | + | chr1.3:10859402-10859421 | None:intergenic | 30.0% | |
| GAAATGTTTGATGTCACATA+CGG | - | chr1.3:10857628-10857647 | MS.gene86258:intron | 30.0% | |
| GATCTATGTCAATAGATTAC+TGG | - | chr1.3:10859047-10859066 | MS.gene86258:CDS | 30.0% | |
| GTTAAGTTTCTGATATCAGA+AGG | - | chr1.3:10857138-10857157 | MS.gene86258:CDS | 30.0% | |
| TAACATAAGACAGGAACAAT+AGG | + | chr1.3:10859109-10859128 | None:intergenic | 30.0% | |
| TCTCTTAACCTATTAAGTTC+AGG | + | chr1.3:10860844-10860863 | None:intergenic | 30.0% | |
| TGAAAATCTATGAGTAGAGA+TGG | + | chr1.3:10856804-10856823 | None:intergenic | 30.0% | |
| TGAAATGAGAAGACTGAAAT+TGG | - | chr1.3:10859211-10859230 | MS.gene86258:CDS | 30.0% | |
| TGACAAATCTTCATGATATG+TGG | + | chr1.3:10856884-10856903 | None:intergenic | 30.0% | |
| TGTTAGCACTATGTATAAAG+TGG | + | chr1.3:10857806-10857825 | None:intergenic | 30.0% | |
| TGTTGAACACAAAATTGATG+TGG | + | chr1.3:10859863-10859882 | None:intergenic | 30.0% | |
| TTCCAACAACTGTATCAAAA+GGG | - | chr1.3:10857177-10857196 | MS.gene86258:CDS | 30.0% | |
| ! | AAAGATTAGTGATGTTGGTT+TGG | - | chr1.3:10860468-10860487 | MS.gene86258:intron | 30.0% |
| ! | ATCTAAAATGGTATTGTGAC+AGG | - | chr1.3:10858214-10858233 | MS.gene86258:intron | 30.0% |
| ! | GTGTTTATGTTAGTTTCTTG+TGG | + | chr1.3:10858017-10858036 | None:intergenic | 30.0% |
| ! | TTGAGGTATTAAGTTGCATA+AGG | - | chr1.3:10860191-10860210 | MS.gene86258:CDS | 30.0% |
| !! | AAAGAAAAGTAGTGGATTCT+TGG | - | chr1.3:10859599-10859618 | MS.gene86258:intron | 30.0% |
| !! | AGCTTTGAGTCAAACAATTA+TGG | - | chr1.3:10858441-10858460 | MS.gene86258:intron | 30.0% |
| !! | CTTGAGAAAACCATTTTTGT+TGG | + | chr1.3:10856768-10856787 | None:intergenic | 30.0% |
| !! | GTATAGAAGGTATTCAATTG+AGG | - | chr1.3:10859639-10859658 | MS.gene86258:intron | 30.0% |
| !! | TCATATAGTTCTGATACTGA+TGG | - | chr1.3:10858411-10858430 | MS.gene86258:intron | 30.0% |
| !! | TCTAGAAGGCATTTATAAAC+AGG | + | chr1.3:10859727-10859746 | None:intergenic | 30.0% |
| !! | TCTTTCTCATTTGATAGTGA+TGG | - | chr1.3:10858501-10858520 | MS.gene86258:intron | 30.0% |
| !!! | CCCTTCTTTTTTATCATTCT+TGG | - | chr1.3:10857897-10857916 | MS.gene86258:CDS | 30.0% |
| !!! | TGTAAGTTTCACTTTTTTCC+AGG | - | chr1.3:10856494-10856513 | MS.gene86258:intron | 30.0% |
| AAATATAAGAAGTAGGCCGA+GGG | - | chr1.3:10857986-10858005 | MS.gene86258:CDS | 35.0% | |
| AAGGACATTGTAGTAGAACA+TGG | - | chr1.3:10856674-10856693 | MS.gene86258:CDS | 35.0% | |
| AATGAGAAAGATGAGTGATC+AGG | + | chr1.3:10858492-10858511 | None:intergenic | 35.0% | |
| ACAAAAGATATGTCACCTTC+TGG | + | chr1.3:10858294-10858313 | None:intergenic | 35.0% | |
| ACTGATCTGAATTGTAGTTG+TGG | + | chr1.3:10858368-10858387 | None:intergenic | 35.0% | |
| AGCACAAGTTAGTAACAATC+AGG | + | chr1.3:10859167-10859186 | None:intergenic | 35.0% | |
| AGGTTATGCCTGAACTTAAT+AGG | - | chr1.3:10860833-10860852 | MS.gene86258:CDS | 35.0% | |
| AGTACATAGAGACCTTAAAC+CGG | - | chr1.3:10860414-10860433 | MS.gene86258:intron | 35.0% | |
| AGTTCTTCACTTCCTTATTC+AGG | - | chr1.3:10861070-10861089 | MS.gene86258:CDS | 35.0% | |
| ATAACCTCTTTACCAAGATC+AGG | + | chr1.3:10860820-10860839 | None:intergenic | 35.0% | |
| ATCTAACCTTTAGTTGCTAC+TGG | + | chr1.3:10857350-10857369 | None:intergenic | 35.0% | |
| ATTAGAAGAAGAGAGGAGAT+TGG | - | chr1.3:10859411-10859430 | MS.gene86258:intron | 35.0% | |
| ATTGGAGCTAAAGCAAACAA+TGG | - | chr1.3:10859229-10859248 | MS.gene86258:CDS | 35.0% | |
| GAACTAACACTTCACATTGA+AGG | - | chr1.3:10858959-10858978 | MS.gene86258:intron | 35.0% | |
| GATGGAAATTAGAAGAAGAG+AGG | - | chr1.3:10859404-10859423 | MS.gene86258:intron | 35.0% | |
| GGAAGAAGGTCTATTGATAT+TGG | - | chr1.3:10858462-10858481 | MS.gene86258:intron | 35.0% | |
| GTTCTTCACTTCCTTATTCA+GGG | - | chr1.3:10861071-10861090 | MS.gene86258:CDS | 35.0% | |
| TCAATCAGCAATTGAGCATT+TGG | - | chr1.3:10856730-10856749 | MS.gene86258:CDS | 35.0% | |
| TCCAACAACTGTATCAAAAG+GGG | - | chr1.3:10857178-10857197 | MS.gene86258:CDS | 35.0% | |
| TCTCCATATGACCTATCATT+TGG | + | chr1.3:10858261-10858280 | None:intergenic | 35.0% | |
| TGAAATCATACTTGCATTGC+AGG | - | chr1.3:10860168-10860187 | MS.gene86258:CDS | 35.0% | |
| TGAACACAAAATTGATGTGG+TGG | + | chr1.3:10859860-10859879 | None:intergenic | 35.0% | |
| TTAAGGTCTCTATGTACTAG+TGG | + | chr1.3:10860412-10860431 | None:intergenic | 35.0% | |
| TTCTGATATCAGAAGGTTCA+AGG | - | chr1.3:10857145-10857164 | MS.gene86258:CDS | 35.0% | |
| TTCTTCACTTCCTTATTCAG+GGG | - | chr1.3:10861072-10861091 | MS.gene86258:CDS | 35.0% | |
| TTCTTCTTCTGCATCAAATG+TGG | - | chr1.3:10858527-10858546 | MS.gene86258:intron | 35.0% | |
| TTTCCAGGATAGAAAACAAG+AGG | - | chr1.3:10856509-10856528 | MS.gene86258:intron | 35.0% | |
| ! | ATATCTTTTGTAAGCTCAGG+AGG | - | chr1.3:10858303-10858322 | MS.gene86258:CDS | 35.0% |
| ! | ATTTTAAACCTTAGCTGCCA+AGG | + | chr1.3:10860337-10860356 | None:intergenic | 35.0% |
| ! | CAGCAGAAGGTATGAAAAAT+TGG | - | chr1.3:10859290-10859309 | MS.gene86258:intron | 35.0% |
| ! | GACATATCTTTTGTAAGCTC+AGG | - | chr1.3:10858300-10858319 | MS.gene86258:CDS | 35.0% |
| ! | GAGAACACAAGATTTGAGTT+CGG | + | chr1.3:10860030-10860049 | None:intergenic | 35.0% |
| ! | GATGATTGTCTCTTTTGTAG+AGG | - | chr1.3:10860295-10860314 | MS.gene86258:CDS | 35.0% |
| ! | TGACTAAGTTGAGATTGTAG+AGG | + | chr1.3:10857290-10857309 | None:intergenic | 35.0% |
| ! | TGTTTTCTTGCATCACAAGT+AGG | - | chr1.3:10857930-10857949 | MS.gene86258:CDS | 35.0% |
| ! | TTTTTGAACTAGGGTTGTTG+TGG | - | chr1.3:10860075-10860094 | MS.gene86258:intron | 35.0% |
| !! | AGTGTTAGTTCTACATAGCT+AGG | + | chr1.3:10858950-10858969 | None:intergenic | 35.0% |
| !!! | ACCATTGTCATTTTGTGTGT+CGG | + | chr1.3:10858997-10859016 | None:intergenic | 35.0% |
| !!! | TTTCCTCTTGTTTTCTATCC+TGG | + | chr1.3:10856515-10856534 | None:intergenic | 35.0% |
| AAGATGGGATGGAATCATTC+AGG | - | chr1.3:10857506-10857525 | MS.gene86258:intron | 40.0% | |
| AAGATTGGAGAAGGTGGTTA+TGG | - | chr1.3:10859700-10859719 | MS.gene86258:intron | 40.0% | |
| ACATGATGTGTCAATCCCAT+TGG | + | chr1.3:10860667-10860686 | None:intergenic | 40.0% | |
| ACCAAGATGTGAGGTATAGA+AGG | - | chr1.3:10859626-10859645 | MS.gene86258:intron | 40.0% | |
| ACCTTCTATACCTCACATCT+TGG | + | chr1.3:10859630-10859649 | None:intergenic | 40.0% | |
| AGGAAAGATAGACCTGATCT+TGG | - | chr1.3:10860805-10860824 | MS.gene86258:CDS | 40.0% | |
| AGTTAGAGACTAGGCACAAT+AGG | - | chr1.3:10860004-10860023 | MS.gene86258:CDS | 40.0% | |
| ATACCATCTGAAGAGAGACT+TGG | + | chr1.3:10860930-10860949 | None:intergenic | 40.0% | |
| ATGGGATTGACACATCATGT+TGG | - | chr1.3:10860667-10860686 | MS.gene86258:intron | 40.0% | |
| CAACACGTAGATCACAAGAT+GGG | - | chr1.3:10857491-10857510 | MS.gene86258:intron | 40.0% | |
| CAGAACTATATGACAGCCTA+GGG | + | chr1.3:10858404-10858423 | None:intergenic | 40.0% | |
| CATTATTGAGCAGTGTTCAG+TGG | - | chr1.3:10856401-10856420 | MS.gene86258:CDS | 40.0% | |
| CGTCCAAATGATAGGTCATA+TGG | - | chr1.3:10858255-10858274 | MS.gene86258:CDS | 40.0% | |
| CTAGGCTCTTCCAACAAAAA+TGG | - | chr1.3:10856755-10856774 | MS.gene86258:CDS | 40.0% | |
| GAAATATAAGAAGTAGGCCG+AGG | - | chr1.3:10857985-10858004 | MS.gene86258:CDS | 40.0% | |
| GAGTCACTTAAGATTGGAGA+AGG | - | chr1.3:10859691-10859710 | MS.gene86258:intron | 40.0% | |
| GATTGTAGAGGTGAAAATGC+AGG | + | chr1.3:10857278-10857297 | None:intergenic | 40.0% | |
| GCGAATAAACGATCTGTACT+TGG | + | chr1.3:10858333-10858352 | None:intergenic | 40.0% | |
| GGGAACATTTAGTGAGATGT+TGG | - | chr1.3:10860705-10860724 | MS.gene86258:intron | 40.0% | |
| GTCGCAAAGATTAGTGATGT+TGG | - | chr1.3:10860463-10860482 | MS.gene86258:intron | 40.0% | |
| TAAGGTGTGCTGAGTTAAGA+AGG | - | chr1.3:10860785-10860804 | MS.gene86258:CDS | 40.0% | |
| TAATCTTTGCGACGTAGTTG+CGG | + | chr1.3:10860456-10860475 | None:intergenic | 40.0% | |
| TACCAACAGACAGGAATGTT+GGG | - | chr1.3:10860580-10860599 | MS.gene86258:intron | 40.0% | |
| TAGACCTGATCTTGGTAAAG+AGG | - | chr1.3:10860813-10860832 | MS.gene86258:CDS | 40.0% | |
| TCACTTAAGATTGGAGAAGG+TGG | - | chr1.3:10859694-10859713 | MS.gene86258:intron | 40.0% | |
| TCAGAACTATATGACAGCCT+AGG | + | chr1.3:10858405-10858424 | None:intergenic | 40.0% | |
| TGATATCAGAAGGTTCAAGG+TGG | - | chr1.3:10857148-10857167 | MS.gene86258:CDS | 40.0% | |
| TGCATCACAAGTAGGTAGTT+CGG | - | chr1.3:10857938-10857957 | MS.gene86258:CDS | 40.0% | |
| TGTTTGATAGGTACACTGCA+AGG | - | chr1.3:10856655-10856674 | MS.gene86258:CDS | 40.0% | |
| TGTTTGTATTAGCACCTGAG+AGG | - | chr1.3:10857452-10857471 | MS.gene86258:intron | 40.0% | |
| TTCGCTGAGTCACTTAAGAT+TGG | - | chr1.3:10859685-10859704 | MS.gene86258:intron | 40.0% | |
| ! | CTAACTTGTGCTGCAAGTAA+AGG | - | chr1.3:10859175-10859194 | MS.gene86258:CDS | 40.0% |
| ! | GTGATGATGTTGTTGTAGGA+TGG | - | chr1.3:10861043-10861062 | MS.gene86258:CDS | 40.0% |
| ! | GTTGGTAGAGCTATTGAGAA+GGG | - | chr1.3:10860685-10860704 | MS.gene86258:intron | 40.0% |
| ! | TGTGGTGATGATGTTGTTGT+AGG | - | chr1.3:10861039-10861058 | MS.gene86258:CDS | 40.0% |
| ! | TGTTGGTAGAGCTATTGAGA+AGG | - | chr1.3:10860684-10860703 | MS.gene86258:intron | 40.0% |
| ! | TTGCATAAGGCATCCAAACA+TGG | - | chr1.3:10860204-10860223 | MS.gene86258:CDS | 40.0% |
| !! | GCAATTGAGCATTTGGTTCT+AGG | - | chr1.3:10856737-10856756 | MS.gene86258:CDS | 40.0% |
| !!! | CCATTGTCATTTTGTGTGTC+GGG | + | chr1.3:10858996-10859015 | None:intergenic | 40.0% |
| AAGGTCACAGTTTCAACGAG+AGG | - | chr1.3:10859795-10859814 | MS.gene86258:intron | 45.0% | |
| ACATTGTCTGCTACTGATGG+CGG | + | chr1.3:10860505-10860524 | None:intergenic | 45.0% | |
| ACCTGAGAGGAAGTCATTTG+AGG | - | chr1.3:10857465-10857484 | MS.gene86258:intron | 45.0% | |
| ACGTAGATCACAAGATGGGA+TGG | - | chr1.3:10857495-10857514 | MS.gene86258:intron | 45.0% | |
| ACTATATGACAGCCTAGGGT+TGG | + | chr1.3:10858400-10858419 | None:intergenic | 45.0% | |
| AGAAGAAGAGAGGAGATTGG+AGG | - | chr1.3:10859414-10859433 | MS.gene86258:intron | 45.0% | |
| AGGCTGTAGAACTCCAAAGA+TGG | - | chr1.3:10859386-10859405 | MS.gene86258:intron | 45.0% | |
| ATTCCTGTCTGTTGGTACTC+AGG | + | chr1.3:10860577-10860596 | None:intergenic | 45.0% | |
| ATTGAGCAGTGTTCAGTGGT+GGG | - | chr1.3:10856405-10856424 | MS.gene86258:CDS | 45.0% | |
| ATTGCAGCTGAAATAGGCAC+AGG | - | chr1.3:10860355-10860374 | MS.gene86258:intron | 45.0% | |
| CACAAAAGACGCGATATGGA+CGG | + | chr1.3:10856464-10856483 | None:intergenic | 45.0% | |
| CACTATTTACCAGTGATCCG+CGG | - | chr1.3:10857039-10857058 | MS.gene86258:CDS | 45.0% | |
| CATACTTGCATTGCAGGTTG+AGG | - | chr1.3:10860174-10860193 | MS.gene86258:CDS | 45.0% | |
| CCAACACGTAGATCACAAGA+TGG | - | chr1.3:10857490-10857509 | MS.gene86258:intron | 45.0% | |
| CCATCTTGTGATCTACGTGT+TGG | + | chr1.3:10857493-10857512 | None:intergenic | 45.0% | |
| CCCGACACACAAAATGACAA+TGG | - | chr1.3:10858993-10859012 | MS.gene86258:CDS | 45.0% | |
| CCTGAGAGGAAGTCATTTGA+GGG | - | chr1.3:10857466-10857485 | MS.gene86258:intron | 45.0% | |
| CTAGGAGACGTCCAAATGAT+AGG | - | chr1.3:10858247-10858266 | MS.gene86258:CDS | 45.0% | |
| CTGAGAGGAAGTCATTTGAG+GGG | - | chr1.3:10857467-10857486 | MS.gene86258:intron | 45.0% | |
| CTTGGACAAACCAAGATGTG+AGG | - | chr1.3:10859617-10859636 | MS.gene86258:intron | 45.0% | |
| CTTGTGCTATCCCCTGAATA+AGG | + | chr1.3:10861085-10861104 | None:intergenic | 45.0% | |
| CTTTAACTGCGACAGGAGTA+TGG | + | chr1.3:10859750-10859769 | None:intergenic | 45.0% | |
| GATGGCTGAAGAATCTGCAT+TGG | - | chr1.3:10859444-10859463 | MS.gene86258:intron | 45.0% | |
| GCAAGTAAAGGATGATGTGG+AGG | - | chr1.3:10859187-10859206 | MS.gene86258:CDS | 45.0% | |
| GCTGCAAGTAAAGGATGATG+TGG | - | chr1.3:10859184-10859203 | MS.gene86258:CDS | 45.0% | |
| GGAAAAGTGATACGCCACAA+AGG | + | chr1.3:10857879-10857898 | None:intergenic | 45.0% | |
| GGAGAACTTTCTATGCCAGA+AGG | - | chr1.3:10858276-10858295 | MS.gene86258:CDS | 45.0% | |
| GGCTGTAGCAGAAATGGAAA+AGG | - | chr1.3:10859465-10859484 | MS.gene86258:intron | 45.0% | |
| GTACCAACAGACAGGAATGT+TGG | - | chr1.3:10860579-10860598 | MS.gene86258:intron | 45.0% | |
| GTCACATTGTCTGCTACTGA+TGG | + | chr1.3:10860508-10860527 | None:intergenic | 45.0% | |
| GTTTATGAGCACATGGCGAA+CGG | - | chr1.3:10860265-10860284 | MS.gene86258:CDS | 45.0% | |
| GTTTCTTGTGGGTAAACCCT+CGG | + | chr1.3:10858005-10858024 | None:intergenic | 45.0% | |
| TAAACAAGGCAGCCGTATTC+CGG | + | chr1.3:10860250-10860269 | None:intergenic | 45.0% | |
| TATTGAGCAGTGTTCAGTGG+TGG | - | chr1.3:10856404-10856423 | MS.gene86258:CDS | 45.0% | |
| TCACAAGTAGGTAGTTCGGT+TGG | - | chr1.3:10857942-10857961 | MS.gene86258:CDS | 45.0% | |
| TCACTCTGCAGTTAGAGACT+AGG | - | chr1.3:10859995-10860014 | MS.gene86258:intron | 45.0% | |
| TCGCCATGTGCTCATAAACA+AGG | + | chr1.3:10860264-10860283 | None:intergenic | 45.0% | |
| TCTCTATGTACTAGTGGCTC+AGG | + | chr1.3:10860406-10860425 | None:intergenic | 45.0% | |
| TGATGTGTCAATCCCATTGG+TGG | + | chr1.3:10860664-10860683 | None:intergenic | 45.0% | |
| TGCTGTGAGTGCTTCTTTAC+AGG | + | chr1.3:10859270-10859289 | None:intergenic | 45.0% | |
| TGGATCCAAGACTGACAGAT+TGG | - | chr1.3:10860725-10860744 | MS.gene86258:intron | 45.0% | |
| TTGAAGCTGCTGAAGCACAA+AGG | - | chr1.3:10859506-10859525 | MS.gene86258:intron | 45.0% | |
| TTGACAGCAAGACCACCAAT+GGG | - | chr1.3:10860649-10860668 | MS.gene86258:intron | 45.0% | |
| TTTGACAGCAAGACCACCAA+TGG | - | chr1.3:10860648-10860667 | MS.gene86258:intron | 45.0% | |
| TTTGGACGTCTCCTAGTGAA+TGG | + | chr1.3:10858243-10858262 | None:intergenic | 45.0% | |
| ! | AGTCAAGCTTTTCCAACCCT+AGG | - | chr1.3:10858385-10858404 | MS.gene86258:intron | 45.0% |
| ! | CTTTTGTAAGCTCAGGAGGA+AGG | - | chr1.3:10858307-10858326 | MS.gene86258:CDS | 45.0% |
| ! | GCCCCTTTTGATACAGTTGT+TGG | + | chr1.3:10857182-10857201 | None:intergenic | 45.0% |
| ! | GGTTTGCTCAGATGGCTATA+AGG | - | chr1.3:10860767-10860786 | MS.gene86258:CDS | 45.0% |
| ! | TTCCTTGTTGTGCATCAGGA+CGG | + | chr1.3:10859777-10859796 | None:intergenic | 45.0% |
| !! | ATGTGGTGGTGTCGCATATA+TGG | + | chr1.3:10859846-10859865 | None:intergenic | 45.0% |
| !! | CTGCCTTGTTTATGAGCACA+TGG | - | chr1.3:10860258-10860277 | MS.gene86258:CDS | 45.0% |
| !! | GCAAGATGTTTGCCGGTTTA+AGG | + | chr1.3:10860429-10860448 | None:intergenic | 45.0% |
| !! | TGCATTGGCTGTAGCAGAAA+TGG | - | chr1.3:10859459-10859478 | MS.gene86258:intron | 45.0% |
| AACCCCATAGCCTCTTCAAC+TGG | + | chr1.3:10860751-10860770 | None:intergenic | 50.0% | |
| AACCTTAGCTGCCAAGGTAG+TGG | + | chr1.3:10860331-10860350 | None:intergenic | 50.0% | |
| AAGCTGCTGAAGCACAAAGG+AGG | - | chr1.3:10859509-10859528 | MS.gene86258:intron | 50.0% | |
| ACCTTAGCTGCCAAGGTAGT+GGG | + | chr1.3:10860330-10860349 | None:intergenic | 50.0% | |
| ACTGGCCAATCTGTCAGTCT+TGG | + | chr1.3:10860733-10860752 | None:intergenic | 50.0% | |
| AGAGGAGATTGGAGGAAGCA+AGG | - | chr1.3:10859422-10859441 | MS.gene86258:intron | 50.0% | |
| CCAAACATGGTTCTCCTCCT+AGG | - | chr1.3:10860217-10860236 | MS.gene86258:CDS | 50.0% | |
| CCCTCAAATGACTTCCTCTC+AGG | + | chr1.3:10857469-10857488 | None:intergenic | 50.0% | |
| CCTAGGAGGAGAACCATGTT+TGG | + | chr1.3:10860220-10860239 | None:intergenic | 50.0% | |
| CGCGGATCACTGGTAAATAG+TGG | + | chr1.3:10857041-10857060 | None:intergenic | 50.0% | |
| CGGAGAACTTTAACTGCGAC+AGG | + | chr1.3:10859757-10859776 | None:intergenic | 50.0% | |
| CGGTCAAGCAAGATGTTTGC+CGG | + | chr1.3:10860436-10860455 | None:intergenic | 50.0% | |
| CGTGTGCCAGTAGCAACTAA+AGG | - | chr1.3:10857341-10857360 | MS.gene86258:intron | 50.0% | |
| CTCCCAACATTCCTGTCTGT+TGG | + | chr1.3:10860585-10860604 | None:intergenic | 50.0% | |
| GAAACACTCACCCACTACCT+TGG | - | chr1.3:10860317-10860336 | MS.gene86258:CDS | 50.0% | |
| GAGATTGGAGGAAGCAAGGA+TGG | - | chr1.3:10859426-10859445 | MS.gene86258:intron | 50.0% | |
| GAGCCAAGTCTCTCTTCAGA+TGG | - | chr1.3:10860924-10860943 | MS.gene86258:intron | 50.0% | |
| GATCCTGAGTACCAACAGAC+AGG | - | chr1.3:10860571-10860590 | MS.gene86258:intron | 50.0% | |
| GTCCTGATGCACAACAAGGA+AGG | - | chr1.3:10859776-10859795 | MS.gene86258:intron | 50.0% | |
| GTGACAGGTCACCATTCACT+AGG | - | chr1.3:10858229-10858248 | MS.gene86258:CDS | 50.0% | |
| GTGCTACAGCGTAGCAGAAT+TGG | - | chr1.3:10856930-10856949 | MS.gene86258:CDS | 50.0% | |
| TATCGAATGACGTCAGCTGC+CGG | - | chr1.3:10860532-10860551 | MS.gene86258:intron | 50.0% | |
| TATTGTCAACCGCGGATCAC+TGG | + | chr1.3:10857051-10857070 | None:intergenic | 50.0% | |
| TGGCCAGTTGAAGAGGCTAT+GGG | - | chr1.3:10860745-10860764 | MS.gene86258:CDS | 50.0% | |
| TTAGTTGCTACTGGCACACG+AGG | + | chr1.3:10857341-10857360 | None:intergenic | 50.0% | |
| TTGGCCAGTTGAAGAGGCTA+TGG | - | chr1.3:10860744-10860763 | MS.gene86258:CDS | 50.0% | |
| ! | CGACAGGAGTATGGTCTAGA+AGG | + | chr1.3:10859741-10859760 | None:intergenic | 50.0% |
| ! | GACAGATTGGCCAGTTGAAG+AGG | - | chr1.3:10860738-10860757 | MS.gene86258:intron | 50.0% |
| ! | GACCTTCCTTGTTGTGCATC+AGG | + | chr1.3:10859781-10859800 | None:intergenic | 50.0% |
| ! | TCATTTTGTGTGTCGGGCAC+TGG | + | chr1.3:10858990-10859009 | None:intergenic | 50.0% |
| !! | GAGACTTGGCTCTGAGTAGA+AGG | + | chr1.3:10860916-10860935 | None:intergenic | 50.0% |
| ACCCACTACCTTGGCAGCTA+AGG | - | chr1.3:10860326-10860345 | MS.gene86258:CDS | 55.0% | |
| AGCACTCACAGCACAGCAGA+AGG | - | chr1.3:10859277-10859296 | MS.gene86258:intron | 55.0% | |
| CGCGCACAAAAGACGCGATA+TGG | + | chr1.3:10856468-10856487 | None:intergenic | 55.0% | |
| CTAGGAGCCTGTCCGGAATA+CGG | - | chr1.3:10860235-10860254 | MS.gene86258:CDS | 55.0% | |
| CTCCGTCCTGATGCACAACA+AGG | - | chr1.3:10859772-10859791 | MS.gene86258:intron | 55.0% | |
| GCACATGGCGAACGGAAGTT+TGG | - | chr1.3:10860273-10860292 | MS.gene86258:CDS | 55.0% | |
| GGCCAGTTGAAGAGGCTATG+GGG | - | chr1.3:10860746-10860765 | MS.gene86258:CDS | 55.0% | |
| ! | GGCTATGGGGTTTGCTCAGA+TGG | - | chr1.3:10860759-10860778 | MS.gene86258:CDS | 55.0% |
| AAGGCAGCCGTATTCCGGAC+AGG | + | chr1.3:10860245-10860264 | None:intergenic | 60.0% | |
| ATTCCGGACAGGCTCCTAGG+AGG | + | chr1.3:10860234-10860253 | None:intergenic | 60.0% | |
| CGTATTCCGGACAGGCTCCT+AGG | + | chr1.3:10860237-10860256 | None:intergenic | 60.0% | |
| GCTACTGGCACACGAGGTTC+TGG | + | chr1.3:10857335-10857354 | None:intergenic | 60.0% | |
| TCTCCTCCTAGGAGCCTGTC+CGG | - | chr1.3:10860228-10860247 | MS.gene86258:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 10856401 | 10861126 | 10856401 | ID=MS.gene86258 |
| chr1.3 | mRNA | 10856401 | 10861126 | 10856401 | ID=MS.gene86258.t1;Parent=MS.gene86258 |
| chr1.3 | exon | 10861033 | 10861126 | 10861033 | ID=MS.gene86258.t1.exon1;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10861033 | 10861126 | 10861033 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10860741 | 10860862 | 10860741 | ID=MS.gene86258.t1.exon2;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10860741 | 10860862 | 10860741 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10860165 | 10860370 | 10860165 | ID=MS.gene86258.t1.exon3;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10860165 | 10860370 | 10860165 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10860000 | 10860063 | 10860000 | ID=MS.gene86258.t1.exon4;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10860000 | 10860063 | 10860000 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10858979 | 10859291 | 10858979 | ID=MS.gene86258.t1.exon5;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10858979 | 10859291 | 10858979 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10858229 | 10858330 | 10858229 | ID=MS.gene86258.t1.exon6;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10858229 | 10858330 | 10858229 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10857711 | 10858139 | 10857711 | ID=MS.gene86258.t1.exon7;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10857711 | 10858139 | 10857711 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10856582 | 10857337 | 10856582 | ID=MS.gene86258.t1.exon8;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10856582 | 10857337 | 10856582 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| chr1.3 | exon | 10856401 | 10856466 | 10856401 | ID=MS.gene86258.t1.exon9;Parent=MS.gene86258.t1 |
| chr1.3 | CDS | 10856401 | 10856466 | 10856401 | ID=cds.MS.gene86258.t1;Parent=MS.gene86258.t1 |
| Gene Sequence |
| Protein sequence |
