AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87006

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87006.t1 MTR_2g072830 92.992 371 14 3 1 370 1 360 0.0 675
MS.gene87006.t1 MTR_4g067310 28.475 295 175 10 99 368 46 329 2.54e-18 85.1
MS.gene87006.t1 MTR_2g098950 27.304 293 181 10 99 368 45 328 9.34e-16 77.8
MS.gene87006.t1 MTR_1g076850 25.623 281 181 9 99 358 39 312 6.18e-13 69.3
MS.gene87006.t1 MTR_5g079460 26.230 366 219 11 46 367 23 381 9.39e-13 69.3
MS.gene87006.t1 MTR_6g089480 24.658 292 190 8 99 367 25 309 1.23e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87006.t1 AT1G17160 67.116 371 97 4 22 367 5 375 8.85e-173 486
MS.gene87006.t1 AT1G17160 64.826 344 96 4 22 340 5 348 3.36e-153 436
MS.gene87006.t1 AT1G06030 28.662 314 190 10 79 367 20 324 2.71e-16 79.3
MS.gene87006.t1 AT1G66430 26.884 398 223 14 4 367 16 379 7.03e-16 78.6
MS.gene87006.t1 AT1G06020 28.136 295 180 8 99 370 41 326 9.21e-16 78.2
MS.gene87006.t1 AT3G59480 27.551 294 179 11 99 368 41 324 4.21e-15 75.9
MS.gene87006.t1 AT4G10260 27.744 328 189 13 60 358 2 310 5.44e-15 75.5
MS.gene87006.t1 AT2G31390 27.389 314 194 9 79 367 18 322 5.64e-15 75.5
MS.gene87006.t1 AT5G51830 26.351 296 182 11 99 368 54 339 6.13e-11 63.5
MS.gene87006.t1 AT5G51830 26.351 296 182 11 99 368 54 339 6.13e-11 63.5
MS.gene87006.t1 AT5G03300 24.451 319 197 11 72 359 38 343 8.91e-11 63.2

Find 117 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTTAACTCACCAATTTA+TGG 0.092451 2.1:+25673919 None:intergenic
ACCTATTCCACAAGAATTAT+TGG 0.176458 2.1:-25674042 MS.gene87006:CDS
TTGGATTTGTGGGGTGGTAA+TGG 0.306303 2.1:+25677041 None:intergenic
TTGGATTGGGTTAATGTGTT+TGG 0.315930 2.1:+25676994 None:intergenic
TCAAGAACAGATTTCCTATC+TGG 0.323886 2.1:+25672753 None:intergenic
AGTGAACTTGGTCGCCTTAC+AGG 0.326669 2.1:-25673990 MS.gene87006:CDS
ACTTGAACATTAACAAAATC+AGG 0.326847 2.1:+25674975 None:intergenic
AAAATGGCAGGTTGCTGAAT+TGG 0.327018 2.1:+25673029 None:intergenic
TCCAATAATTCTTGTGGAAT+AGG 0.336587 2.1:+25674041 None:intergenic
TTGGAGGTTGTTTCCTCCGC+TGG 0.341293 2.1:-25675023 MS.gene87006:CDS
AAATCTGAGGCATTCCTTCT+TGG 0.343182 2.1:+25672926 None:intergenic
CAACAATAACAATAGAATTC+TGG 0.354205 2.1:+25675093 None:intergenic
GAGTGTTGAATCGAAGGAAT+TGG 0.374705 2.1:+25676975 None:intergenic
GTTCTTCTCCTTCTATGAAA+AGG 0.376450 2.1:+25673051 None:intergenic
AGATTGTTTCGCCTTCCTTC+GGG 0.376760 2.1:+25676825 None:intergenic
TGCTGCAAAATGCCATAAAT+TGG 0.377917 2.1:-25673931 MS.gene87006:intron
TATGAAAAGGGCAGATCCTT+TGG 0.380777 2.1:+25673064 None:intergenic
GAGATTGTTTCGCCTTCCTT+CGG 0.386856 2.1:+25676824 None:intergenic
AAGGAATGCCTCAGATTTGC+CGG 0.394393 2.1:-25672921 MS.gene87006:intron
AACTTCTTAATCATCATTGA+AGG 0.396598 2.1:-25672731 None:intergenic
ATGTTTGTGCTTGGATTTGT+GGG 0.400817 2.1:+25677031 None:intergenic
CACTTCGAGATGGTGGTGTT+CGG 0.407353 2.1:-25675184 MS.gene87006:CDS
CAGAATTCTATTGTTATTGT+TGG 0.408758 2.1:-25675092 MS.gene87006:CDS
TGGGTTAATGTGTTTGGATG+AGG 0.414551 2.1:+25677000 None:intergenic
TGCTTAGGTGGCAGAGTTTG+AGG 0.415526 2.1:+25675047 None:intergenic
TTTACGGCGAAACGCAGAAC+TGG 0.415582 2.1:+25676923 None:intergenic
GTGGTGATGAAAGGGTTGTT+TGG 0.433676 2.1:+25677065 None:intergenic
CCTATCTGGCATGCTGGGAA+TGG 0.434811 2.1:+25672767 None:intergenic
TTTGCTGTGGCCTTGGTGGA+GGG 0.436917 2.1:-25672954 MS.gene87006:CDS
GTGGTGCTAATGTGAGTTGT+TGG 0.437540 2.1:-25675070 MS.gene87006:CDS
AATTCTATTGTTATTGTTGG+TGG 0.445042 2.1:-25675089 MS.gene87006:CDS
CCATTCCCAGCATGCCAGAT+AGG 0.445085 2.1:-25672767 MS.gene87006:CDS
AGTCTGTGATGATGGGTTTA+CGG 0.449569 2.1:+25676907 None:intergenic
GTTGTGCCTTCTGCTCCAAC+TGG 0.453426 2.1:-25675146 MS.gene87006:CDS
TGAATCGAAGGAATTGGATT+GGG 0.463363 2.1:+25676981 None:intergenic
ATCTCTTCAAAACTTTCAGT+TGG 0.463975 2.1:+25673963 None:intergenic
AAAAGTGGGCAGACGTTAGC+CGG 0.466722 2.1:-25676797 MS.gene87006:CDS
CGACCAAGTTCACTTTCGTT+GGG 0.466795 2.1:+25673999 None:intergenic
GCGACCAAGTTCACTTTCGT+TGG 0.467166 2.1:+25673998 None:intergenic
AATGTTTGTGCTTGGATTTG+TGG 0.470468 2.1:+25677030 None:intergenic
GACGTAAATGTCGGCATTGG+CGG 0.470984 2.1:+25676862 None:intergenic
AGATTTCCTATCTGGCATGC+TGG 0.474762 2.1:+25672761 None:intergenic
TTTCGCCTTCCTTCGGGAGG+CGG 0.474841 2.1:+25676831 None:intergenic
GGTAATGGTGTGGTGATGAA+AGG 0.475541 2.1:+25677056 None:intergenic
TGCCAGTAATATTTGATGCC+GGG 0.477091 2.1:-25674076 MS.gene87006:CDS
AAGCAAGTTCTCGTGAAACT+TGG 0.477329 2.1:-25673089 MS.gene87006:CDS
TTGAATCGAAGGAATTGGAT+TGG 0.480596 2.1:+25676980 None:intergenic
AGTCCCAACGAAAGTGAACT+TGG 0.482287 2.1:-25674002 MS.gene87006:CDS
TTCTTCTCCTTCTATGAAAA+GGG 0.482858 2.1:+25673052 None:intergenic
AAAACAGTCGTTGACACAAC+CGG 0.484040 2.1:-25673002 MS.gene87006:CDS
TTTCAGTTGGAAGTCCTGTA+AGG 0.485492 2.1:+25673976 None:intergenic
TGGAGGTTGTTTCCTCCGCT+GGG 0.489971 2.1:-25675022 MS.gene87006:CDS
TCCGACTTACTTCCTCGGTC+AGG 0.490068 2.1:-25676729 MS.gene87006:intron
GAAACAATCTCGGCGAAAAG+TGG 0.498858 2.1:-25676812 MS.gene87006:CDS
ACTGGTGGAGTCTGTGATGA+TGG 0.503478 2.1:+25676899 None:intergenic
TTCTCTCTGTGTTCAAGTCA+AGG 0.504497 2.1:-25672793 MS.gene87006:CDS
AACTCTGCCACCTAAGCAGT+TGG 0.509248 2.1:-25675042 MS.gene87006:CDS
GAAACAACCTCCAACTGCTT+AGG 0.511706 2.1:+25675032 None:intergenic
CAGACGTTAGCCGGCGGGAA+AGG 0.513911 2.1:-25676788 MS.gene87006:CDS
GTTGTTATGCTTCAGTCTAG+TGG 0.516229 2.1:-25675116 MS.gene87006:CDS
GATTTCCTATCTGGCATGCT+GGG 0.516667 2.1:+25672762 None:intergenic
GTGGTGAAAATGTTTGTGCT+TGG 0.517077 2.1:+25677022 None:intergenic
ATCGACCGCCTCCCGAAGGA+AGG 0.524569 2.1:-25676836 MS.gene87006:CDS
TGTTAATGTTCAAGTGGCAA+AGG 0.525790 2.1:-25674967 MS.gene87006:intron
ACAAAATCCAATAATTCTTG+TGG 0.527223 2.1:+25674035 None:intergenic
AGTGAAAGTATCACCAGCTC+CGG 0.533445 2.1:+25672983 None:intergenic
GTGCCAGTAATATTTGATGC+CGG 0.533728 2.1:-25674077 MS.gene87006:CDS
TGGCACACCAGCATTCTTTG+CGG 0.535879 2.1:+25674094 None:intergenic
ACTCCACCAGTCGTTGTTGT+CGG 0.536759 2.1:-25676887 MS.gene87006:CDS
CTCGTGAAACTTGGTGCCAA+AGG 0.537833 2.1:-25673080 MS.gene87006:CDS
TTGTGCTTGGATTTGTGGGG+TGG 0.540687 2.1:+25677035 None:intergenic
GTCGTTGACACAACCGGAGC+TGG 0.543275 2.1:-25672996 MS.gene87006:CDS
GTAATGGTGTGGTGATGAAA+GGG 0.548075 2.1:+25677057 None:intergenic
GTGGGCAGACGTTAGCCGGC+GGG 0.550446 2.1:-25676793 MS.gene87006:CDS
ACAACCTCCAACTGCTTAGG+TGG 0.553951 2.1:+25675035 None:intergenic
CTGGGATTGTTCTGTTGCAG+AGG 0.554345 2.1:-25675004 MS.gene87006:CDS
GTTAATGTGTTTGGATGAGG+TGG 0.555342 2.1:+25677003 None:intergenic
ATCACTGATGCACTTCGAGA+TGG 0.557824 2.1:-25675194 MS.gene87006:CDS
GCATGACCAGTTGGAGCAGA+AGG 0.567196 2.1:+25675140 None:intergenic
TGGGATTGTTCTGTTGCAGA+GGG 0.568009 2.1:-25675003 MS.gene87006:CDS
GAAGGAAGGCGAAACAATCT+CGG 0.568493 2.1:-25676822 MS.gene87006:CDS
TCTGCCACCTAAGCAGTTGG+AGG 0.569384 2.1:-25675039 MS.gene87006:CDS
CTCGACGTAAATGTCGGCAT+TGG 0.571729 2.1:+25676859 None:intergenic
TCTCTCTGTGTTCAAGTCAA+GGG 0.572637 2.1:-25672792 MS.gene87006:CDS
GCCAGTAATATTTGATGCCG+GGG 0.573532 2.1:-25674075 MS.gene87006:CDS
CTTGGACTTGCCCTCCACCA+AGG 0.575509 2.1:+25672944 None:intergenic
GCGGATCCGACAACAACGAC+TGG 0.578415 2.1:+25676881 None:intergenic
AAACAATCTCGGCGAAAAGT+GGG 0.580343 2.1:-25676811 MS.gene87006:CDS
ATACAGGCCGCAAAGAATGC+TGG 0.580541 2.1:-25674101 MS.gene87006:intron
CTGGTGGAGTCTGTGATGAT+GGG 0.586248 2.1:+25676900 None:intergenic
GATTTGGAGTGTTGAATCGA+AGG 0.591684 2.1:+25676969 None:intergenic
GATCCGACAACAACGACTGG+TGG 0.596155 2.1:+25676884 None:intergenic
TTTGTGGGGTGGTAATGGTG+TGG 0.596186 2.1:+25677046 None:intergenic
GTCGATCTCGACGTAAATGT+CGG 0.597646 2.1:+25676853 None:intergenic
CTTGAACATTAACAAAATCA+GGG 0.602199 2.1:+25674976 None:intergenic
CGAGATCGACCGCCTCCCGA+AGG 0.605889 2.1:-25676840 MS.gene87006:CDS
TCTCATCCGACTTACTTCCT+CGG 0.608832 2.1:-25676734 MS.gene87006:CDS
CTCGAAGTGCATCAGTGATG+AGG 0.611238 2.1:+25675198 None:intergenic
GGTGGAGGGCAAGTCCAAGA+AGG 0.612411 2.1:-25672940 MS.gene87006:CDS
AATAGGTGCATCGATTCCCC+CGG 0.619443 2.1:+25674058 None:intergenic
TTACGGCGAAACGCAGAACT+GGG 0.620873 2.1:+25676924 None:intergenic
ATAACAACTGCATGACCAGT+TGG 0.632822 2.1:+25675131 None:intergenic
CAGGTTGGGAACGATGCTCA+CGG 0.639205 2.1:-25675224 MS.gene87006:CDS
TTGTTTCGCCTTCCTTCGGG+AGG 0.640370 2.1:+25676828 None:intergenic
TGTTTGTGCTTGGATTTGTG+GGG 0.645650 2.1:+25677032 None:intergenic
AACACATACCGGCAAATCTG+AGG 0.647842 2.1:+25672913 None:intergenic
ACTGATGCACTTCGAGATGG+TGG 0.651475 2.1:-25675191 MS.gene87006:CDS
CAACAGAACAATCCCAGCGG+AGG 0.651935 2.1:+25675010 None:intergenic
TTGATTAGCACCTTTCCCGC+CGG 0.653337 2.1:+25676778 None:intergenic
AGTGGGCAGACGTTAGCCGG+CGG 0.657845 2.1:-25676794 MS.gene87006:CDS
ACCTGACCGAGGAAGTAAGT+CGG 0.675660 2.1:+25676728 None:intergenic
CCAGTAATATTTGATGCCGG+GGG 0.678587 2.1:-25674074 MS.gene87006:CDS
TCTAACTAACAACCTGACCG+AGG 0.687907 2.1:+25676717 None:intergenic
CGGCGAAACGCAGAACTGGG+TGG 0.689237 2.1:+25676927 None:intergenic
GGTGCTAATCAAGCTTGCTG+TGG 0.692795 2.1:-25676767 MS.gene87006:CDS
AGTTGGAGCAGAAGGCACAA+CGG 0.725665 2.1:+25675148 None:intergenic
CTGCAACAGAACAATCCCAG+CGG 0.770235 2.1:+25675007 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTGTATTTTTATACT+AGG - chr2.1:25675330-25675349 MS.gene87006:intron 10.0%
!! ATTTAATTCAATAGTTTGAA+AGG + chr2.1:25676524-25676543 None:intergenic 15.0%
!! TATTAGTAATTTACTTATAG+TGG - chr2.1:25673236-25673255 MS.gene87006:intron 15.0%
!!! TTTAATTTGATTTAAGGAAA+AGG + chr2.1:25676256-25676275 None:intergenic 15.0%
!! AAAAATAAAAGTTACCAAAC+AGG - chr2.1:25673463-25673482 MS.gene87006:intron 20.0%
!! AAGATACAATGTAAAATAGA+TGG + chr2.1:25676566-25676585 None:intergenic 20.0%
!! ACACAACTAATTCAAATTTA+TGG + chr2.1:25673953-25673972 None:intergenic 20.0%
!! ATCACAACTAATTCTAATTT+AGG + chr2.1:25674358-25674377 None:intergenic 20.0%
!! ATGCATATTAAAAACGAATA+TGG + chr2.1:25675950-25675969 None:intergenic 20.0%
!! CATGTAAAGTTATTTATGTT+TGG + chr2.1:25675235-25675254 None:intergenic 20.0%
!! CTAATTGAATTTGTAATGTT+TGG - chr2.1:25673283-25673302 MS.gene87006:intron 20.0%
!! TCACAACTAATTCTAATTTA+GGG + chr2.1:25674357-25674376 None:intergenic 20.0%
!!! AATATTTTATACTGTGAAAC+CGG - chr2.1:25675372-25675391 MS.gene87006:intron 20.0%
!!! ATTATTTTATTGAAGTCTAG+TGG - chr2.1:25675568-25675587 MS.gene87006:intron 20.0%
!!! CAAAAAATTCTGAAATTTCA+GGG - chr2.1:25676688-25676707 MS.gene87006:intron 20.0%
!!! GTTTTTGATTAGTTACAATT+TGG - chr2.1:25673157-25673176 MS.gene87006:intron 20.0%
!!! TCAAAAAATTCTGAAATTTC+AGG - chr2.1:25676687-25676706 MS.gene87006:intron 20.0%
!!! TGTTTTAATTAAGATAACAG+TGG - chr2.1:25673741-25673760 MS.gene87006:intron 20.0%
! ACAAAATCCAATAATTCTTG+TGG + chr2.1:25675772-25675791 None:intergenic 25.0%
! ACTTGAACATTAACAAAATC+AGG + chr2.1:25674832-25674851 None:intergenic 25.0%
! AGATATGAAAGAAATGATCA+TGG - chr2.1:25676046-25676065 MS.gene87006:intron 25.0%
! AGTTATCATTATGTAGAAGT+TGG - chr2.1:25674420-25674439 MS.gene87006:intron 25.0%
! ATCAAATTAAATGCACCATA+AGG - chr2.1:25676265-25676284 MS.gene87006:intron 25.0%
! ATGGTATAGATAATCATTAG+GGG - chr2.1:25676065-25676084 MS.gene87006:intron 25.0%
! ATTAAAAACGAATATGGCAA+TGG + chr2.1:25675944-25675963 None:intergenic 25.0%
! ATTCAAATTTATGGTCTGTT+CGG + chr2.1:25673944-25673963 None:intergenic 25.0%
! CAACAATAACAATAGAATTC+TGG + chr2.1:25674714-25674733 None:intergenic 25.0%
! CATGGTATAGATAATCATTA+GGG - chr2.1:25676064-25676083 MS.gene87006:intron 25.0%
! CTACAAATTTATTTGCAACA+AGG + chr2.1:25675499-25675518 None:intergenic 25.0%
! CTTGAACATTAACAAAATCA+GGG + chr2.1:25674831-25674850 None:intergenic 25.0%
! GGTTGAACTAGATTATAAAT+AGG - chr2.1:25674123-25674142 MS.gene87006:intron 25.0%
! TACTTTAACTCACCAATTTA+TGG + chr2.1:25675888-25675907 None:intergenic 25.0%
! TCATGGTATAGATAATCATT+AGG - chr2.1:25676063-25676082 MS.gene87006:intron 25.0%
! TTTGCTAATATAGTATAACC+TGG - chr2.1:25676335-25676354 MS.gene87006:intron 25.0%
!! AATTCTATTGTTATTGTTGG+TGG - chr2.1:25674715-25674734 MS.gene87006:intron 25.0%
!! AATTTGATTTAAGGAAAAGG+TGG + chr2.1:25676253-25676272 None:intergenic 25.0%
!! ATTTGATTTAAGGAAAAGGT+GGG + chr2.1:25676252-25676271 None:intergenic 25.0%
!! CAGAATTCTATTGTTATTGT+TGG - chr2.1:25674712-25674731 MS.gene87006:intron 25.0%
!! CTATTTTACATTGTATCTTC+AGG - chr2.1:25676567-25676586 MS.gene87006:intron 25.0%
!! CTTCAAATTAGATTCAAGTT+TGG + chr2.1:25675182-25675201 None:intergenic 25.0%
!! TGATTTTGTTAATGTTCAAG+TGG - chr2.1:25674831-25674850 MS.gene87006:intron 25.0%
!! TTTTAATATGCATGCATATG+TGG - chr2.1:25675957-25675976 MS.gene87006:intron 25.0%
!!! AGTTATGATTAGTTTGAAGA+TGG - chr2.1:25673975-25673994 MS.gene87006:CDS 25.0%
!!! AGTTATGATTAGTTTGAAGT+TGG - chr2.1:25674026-25674045 MS.gene87006:CDS 25.0%
!!! GGTGCATTTAATTTGATTTA+AGG + chr2.1:25676262-25676281 None:intergenic 25.0%
AAAATTCCAAAACCCTGTTT+AGG + chr2.1:25676125-25676144 None:intergenic 30.0%
ACCATAAGGTTAAATTATGG+GGG - chr2.1:25676279-25676298 MS.gene87006:intron 30.0%
ACCTATTCCACAAGAATTAT+TGG - chr2.1:25675762-25675781 MS.gene87006:intron 30.0%
AGTTGTGATTAATTAGCAGT+TGG - chr2.1:25674369-25674388 MS.gene87006:intron 30.0%
ATAAGCTTGTGAGAAAATGT+TGG - chr2.1:25673861-25673880 MS.gene87006:intron 30.0%
ATAGTATAACCTGGTACTAT+AGG - chr2.1:25676344-25676363 MS.gene87006:intron 30.0%
ATCTCTTCAAAACTTTCAGT+TGG + chr2.1:25675844-25675863 None:intergenic 30.0%
ATGTTAGATAAGTGCATGTT+TGG - chr2.1:25675080-25675099 MS.gene87006:CDS 30.0%
CACCATAAGGTTAAATTATG+GGG - chr2.1:25676278-25676297 MS.gene87006:intron 30.0%
CTGTGTAGATAAGAAAGAAA+TGG - chr2.1:25676014-25676033 MS.gene87006:intron 30.0%
GACATAAAATTTGCGATTGT+AGG - chr2.1:25673343-25673362 MS.gene87006:intron 30.0%
GCACCATAAGGTTAAATTAT+GGG - chr2.1:25676277-25676296 MS.gene87006:intron 30.0%
GCAGTGTTTAGTAAAATTAG+TGG - chr2.1:25674102-25674121 MS.gene87006:intron 30.0%
GCGAAAAAATTGATACAATG+AGG + chr2.1:25674486-25674505 None:intergenic 30.0%
GGTTGTTAGTTAGATATAGT+TGG - chr2.1:25673096-25673115 MS.gene87006:CDS 30.0%
TAGTATAACCTGGTACTATA+GGG - chr2.1:25676345-25676364 MS.gene87006:intron 30.0%
TATGATTACTATGACTCTGT+TGG - chr2.1:25673552-25673571 MS.gene87006:intron 30.0%
TCCAATAATTCTTGTGGAAT+AGG + chr2.1:25675766-25675785 None:intergenic 30.0%
TGACATTAAAAGAATCTCAG+TGG - chr2.1:25676641-25676660 MS.gene87006:intron 30.0%
TGCACCATAAGGTTAAATTA+TGG - chr2.1:25676276-25676295 MS.gene87006:intron 30.0%
TTCTTCTCCTTCTATGAAAA+GGG + chr2.1:25676755-25676774 None:intergenic 30.0%
TTGAAGAAATGTTCAGCAAT+AGG + chr2.1:25675052-25675071 None:intergenic 30.0%
! ACATTTTCTCACAAGCTTAT+CGG + chr2.1:25673861-25673880 None:intergenic 30.0%
! CAAATTAGATTCAAGTTTGG+AGG + chr2.1:25675179-25675198 None:intergenic 30.0%
! CTGAGATTCTTTTAATGTCA+CGG + chr2.1:25676641-25676660 None:intergenic 30.0%
! GTTGATGAGTTAACTTATAG+TGG - chr2.1:25673611-25673630 MS.gene87006:intron 30.0%
! TGTAGGACACTATTTTCAAA+TGG + chr2.1:25675458-25675477 None:intergenic 30.0%
!! TATTTTGCTGTGTATCTTCT+TGG - chr2.1:25676922-25676941 MS.gene87006:CDS 30.0%
!!! AACGACTGTTTTAGCAAAAA+TGG + chr2.1:25676794-25676813 None:intergenic 30.0%
!!! AAGTTTTGAAGAGATTACAC+AGG - chr2.1:25675849-25675868 MS.gene87006:intron 30.0%
!!! TTTTTTGTGTTGACTGTTGA+GGG - chr2.1:25676146-25676165 MS.gene87006:intron 30.0%
!!! TTTTTTTGTGTTGACTGTTG+AGG - chr2.1:25676145-25676164 MS.gene87006:intron 30.0%
AAAAAAATAGACCAGCACTC+TGG + chr2.1:25675545-25675564 None:intergenic 35.0%
AAAACCCTGTTTAGGAAGTA+AGG + chr2.1:25676117-25676136 None:intergenic 35.0%
AAGCAGCCTATCAAAAAATG+CGG - chr2.1:25673818-25673837 MS.gene87006:intron 35.0%
AATCTCAGTGGTTACTTATC+TGG - chr2.1:25676653-25676672 MS.gene87006:intron 35.0%
AATGCACTTTACAACCTACT+TGG - chr2.1:25676189-25676208 MS.gene87006:intron 35.0%
AATGGCCACTTCTTATAAAG+AGG + chr2.1:25675440-25675459 None:intergenic 35.0%
AATGTTTGTGCTTGGATTTG+TGG + chr2.1:25672777-25672796 None:intergenic 35.0%
AGTAGGTTGTAAAGTGCATT+AGG + chr2.1:25676189-25676208 None:intergenic 35.0%
ATACATTCTGCAACACATAC+CGG + chr2.1:25676905-25676924 None:intergenic 35.0%
ATGCACTTTACAACCTACTT+GGG - chr2.1:25676190-25676209 MS.gene87006:intron 35.0%
ATGTTTGTGCTTGGATTTGT+GGG + chr2.1:25672776-25672795 None:intergenic 35.0%
ATTCAAGTAGAACATCCGTA+AGG + chr2.1:25675914-25675933 None:intergenic 35.0%
CCAAACACTACAAATTCAAC+CGG + chr2.1:25673646-25673665 None:intergenic 35.0%
CCATAAGGTTAAATTATGGG+GGG - chr2.1:25676280-25676299 MS.gene87006:intron 35.0%
CCTACACACTTTAAGCTATA+CGG - chr2.1:25673789-25673808 MS.gene87006:intron 35.0%
CTAGTTAACAAAGACCTGTT+TGG + chr2.1:25673480-25673499 None:intergenic 35.0%
GTAGACCTCTTTATAAGAAG+TGG - chr2.1:25675432-25675451 MS.gene87006:intron 35.0%
GTTCTTCTCCTTCTATGAAA+AGG + chr2.1:25676756-25676775 None:intergenic 35.0%
TCAAGAACAGATTTCCTATC+TGG + chr2.1:25677054-25677073 None:intergenic 35.0%
TGAATCGAAGGAATTGGATT+GGG + chr2.1:25672826-25672845 None:intergenic 35.0%
TGACAAGCACAATAAGCTAT+AGG + chr2.1:25674328-25674347 None:intergenic 35.0%
TGAGTTAAAGTAGTGCCTTA+CGG - chr2.1:25675896-25675915 MS.gene87006:intron 35.0%
TGCTGCAAAATGCCATAAAT+TGG - chr2.1:25675873-25675892 MS.gene87006:intron 35.0%
TGTTAATGTTCAAGTGGCAA+AGG - chr2.1:25674837-25674856 MS.gene87006:intron 35.0%
TTGAATCGAAGGAATTGGAT+TGG + chr2.1:25672827-25672846 None:intergenic 35.0%
! AGCCAAAATGTATTTTGCTC+TGG - chr2.1:25675677-25675696 MS.gene87006:intron 35.0%
! CACCAGAGCAAAATACATTT+TGG + chr2.1:25675682-25675701 None:intergenic 35.0%
! TCTCACTGCTTTCTTTTCTT+TGG - chr2.1:25676088-25676107 MS.gene87006:intron 35.0%
! TGGAATCAAACTTTTGCAAG+TGG + chr2.1:25676441-25676460 None:intergenic 35.0%
! TTACTTCCTAAACAGGGTTT+TGG - chr2.1:25676116-25676135 MS.gene87006:intron 35.0%
! TTGGATTGGGTTAATGTGTT+TGG + chr2.1:25672813-25672832 None:intergenic 35.0%
! TTGGCTAGTTAAGAATCTTG+CGG + chr2.1:25675663-25675682 None:intergenic 35.0%
!! AGTTTTGATCTGGAATTGAG+TGG - chr2.1:25674945-25674964 MS.gene87006:intron 35.0%
!! CTGTTGTGTTTGAGTTTTCT+CGG - chr2.1:25675138-25675157 MS.gene87006:CDS 35.0%
!! GTTTTGATCTGGAATTGAGT+GGG - chr2.1:25674946-25674965 MS.gene87006:intron 35.0%
!! TGTTGTGTTTGAGTTTTCTC+GGG - chr2.1:25675139-25675158 MS.gene87006:CDS 35.0%
!!! ACTGTTTTAGCAAAAATGGC+AGG + chr2.1:25676790-25676809 None:intergenic 35.0%
!!! AGCTTACCGCATTTTTTGAT+AGG + chr2.1:25673827-25673846 None:intergenic 35.0%
!!! TGCAATAGCTAGTTTTGATC+TGG - chr2.1:25674935-25674954 MS.gene87006:intron 35.0%
AAAACAGTCGTTGACACAAC+CGG - chr2.1:25676802-25676821 MS.gene87006:CDS 40.0%
AAAATGGCAGGTTGCTGAAT+TGG + chr2.1:25676778-25676797 None:intergenic 40.0%
AAACAATCTCGGCGAAAAGT+GGG - chr2.1:25672993-25673012 MS.gene87006:CDS 40.0%
AATGTTCAAGTGGCAAAGGT+TGG - chr2.1:25674841-25674860 MS.gene87006:intron 40.0%
ACAACCTACTTGGGAAAAGT+AGG - chr2.1:25676199-25676218 MS.gene87006:intron 40.0%
ACATCAATCTACAAGCCTTC+AGG + chr2.1:25676607-25676626 None:intergenic 40.0%
ATAACAACTGCATGACCAGT+TGG + chr2.1:25674676-25674695 None:intergenic 40.0%
ATACGCTAGTGACAAAGTGA+TGG - chr2.1:25674255-25674274 MS.gene87006:intron 40.0%
CAACCTACTTGGGAAAAGTA+GGG - chr2.1:25676200-25676219 MS.gene87006:intron 40.0%
CAGTCTCATGCATACTACAA+TGG + chr2.1:25675298-25675317 None:intergenic 40.0%
CATCAATCTACAAGCCTTCA+GGG + chr2.1:25676606-25676625 None:intergenic 40.0%
CCCCCCATAATTTAACCTTA+TGG + chr2.1:25676283-25676302 None:intergenic 40.0%
CCGGTTGAATTTGTAGTGTT+TGG - chr2.1:25673643-25673662 MS.gene87006:intron 40.0%
CCGTATAGCTTAAAGTGTGT+AGG + chr2.1:25673792-25673811 None:intergenic 40.0%
CTAGTTAAGAATCTTGCGGA+TGG + chr2.1:25675659-25675678 None:intergenic 40.0%
GGTTAAATTATGGGGGGAAA+AGG - chr2.1:25676286-25676305 MS.gene87006:intron 40.0%
GTGCCAGTAATATTTGATGC+CGG - chr2.1:25675727-25675746 MS.gene87006:intron 40.0%
GTGGTGAAAATGTTTGTGCT+TGG + chr2.1:25672785-25672804 None:intergenic 40.0%
GTTAATGTGTTTGGATGAGG+TGG + chr2.1:25672804-25672823 None:intergenic 40.0%
GTTGTTATGCTTCAGTCTAG+TGG - chr2.1:25674688-25674707 MS.gene87006:intron 40.0%
TATCTGCTATGCACTTCGTA+CGG - chr2.1:25675598-25675617 MS.gene87006:intron 40.0%
TATGAAAAGGGCAGATCCTT+TGG + chr2.1:25676743-25676762 None:intergenic 40.0%
TATGATTCTCAACGCAGGTT+GGG - chr2.1:25674566-25674585 MS.gene87006:intron 40.0%
TCTACTATGATTCTCAACGC+AGG - chr2.1:25674561-25674580 MS.gene87006:intron 40.0%
TCTCTCTGTGTTCAAGTCAA+GGG - chr2.1:25677012-25677031 MS.gene87006:CDS 40.0%
TGCCAGTAATATTTGATGCC+GGG - chr2.1:25675728-25675747 MS.gene87006:intron 40.0%
TGGGTTAATGTGTTTGGATG+AGG + chr2.1:25672807-25672826 None:intergenic 40.0%
TGTTTGTGCTTGGATTTGTG+GGG + chr2.1:25672775-25672794 None:intergenic 40.0%
TTCTCTCTGTGTTCAAGTCA+AGG - chr2.1:25677011-25677030 MS.gene87006:CDS 40.0%
TTTCAGTTGGAAGTCCTGTA+AGG + chr2.1:25675831-25675850 None:intergenic 40.0%
! AAATCTGAGGCATTCCTTCT+TGG + chr2.1:25676881-25676900 None:intergenic 40.0%
! ACTTTTGCAAGTGGAAGACA+AGG + chr2.1:25676432-25676451 None:intergenic 40.0%
! GCATGTTTGGTTTCACTTTG+AGG - chr2.1:25675093-25675112 MS.gene87006:CDS 40.0%
! GTAATGGTGTGGTGATGAAA+GGG + chr2.1:25672750-25672769 None:intergenic 40.0%
! GTAGCCTTACTTCCTAAACA+GGG - chr2.1:25676110-25676129 MS.gene87006:intron 40.0%
! TATTTTGCTCTGGTGCATAC+AGG - chr2.1:25675687-25675706 MS.gene87006:intron 40.0%
! TGTTTGGTTTCACTTTGAGG+AGG - chr2.1:25675096-25675115 MS.gene87006:CDS 40.0%
!! AGTCTGTGATGATGGGTTTA+CGG + chr2.1:25672900-25672919 None:intergenic 40.0%
!! CTTATAGTGGATAAGCTAGC+CGG - chr2.1:25673624-25673643 MS.gene87006:intron 40.0%
!! GAGTGTTGAATCGAAGGAAT+TGG + chr2.1:25672832-25672851 None:intergenic 40.0%
!! GATTTGGAGTGTTGAATCGA+AGG + chr2.1:25672838-25672857 None:intergenic 40.0%
!! GGCAGTTTTAGTGCAATAGT+TGG + chr2.1:25676503-25676522 None:intergenic 40.0%
!!! GGTGGTTTTGTTTGTCGTTT+TGG + chr2.1:25672862-25672881 None:intergenic 40.0%
!!! TGTTTGTCGTTTTGGCGATT+TGG + chr2.1:25672854-25672873 None:intergenic 40.0%
AACACATACCGGCAAATCTG+AGG + chr2.1:25676894-25676913 None:intergenic 45.0%
AAGGAATGCCTCAGATTTGC+CGG - chr2.1:25676883-25676902 MS.gene87006:CDS 45.0%
AGATATGAATGCCAGAGTGC+TGG - chr2.1:25675531-25675550 MS.gene87006:intron 45.0%
AGATTGTTTCGCCTTCCTTC+GGG + chr2.1:25672982-25673001 None:intergenic 45.0%
AGATTTCCTATCTGGCATGC+TGG + chr2.1:25677046-25677065 None:intergenic 45.0%
AGTCCCAACGAAAGTGAACT+TGG - chr2.1:25675802-25675821 MS.gene87006:intron 45.0%
AGTTAGTTGGAGAAGCAGAC+TGG - chr2.1:25675399-25675418 MS.gene87006:intron 45.0%
ATCACTGATGCACTTCGAGA+TGG - chr2.1:25674610-25674629 MS.gene87006:intron 45.0%
CCAGTAATATTTGATGCCGG+GGG - chr2.1:25675730-25675749 MS.gene87006:intron 45.0%
CGACCAAGTTCACTTTCGTT+GGG + chr2.1:25675808-25675827 None:intergenic 45.0%
CGTGAATTCATGACTCGTGT+AGG + chr2.1:25675475-25675494 None:intergenic 45.0%
CTATGATTCTCAACGCAGGT+TGG - chr2.1:25674565-25674584 MS.gene87006:intron 45.0%
CTTCTCCAACTAACTGTGTC+CGG + chr2.1:25675394-25675413 None:intergenic 45.0%
GAAACAACCTCCAACTGCTT+AGG + chr2.1:25674775-25674794 None:intergenic 45.0%
GAAACAATCTCGGCGAAAAG+TGG - chr2.1:25672992-25673011 MS.gene87006:CDS 45.0%
GAAGGAAGGCGAAACAATCT+CGG - chr2.1:25672982-25673001 MS.gene87006:CDS 45.0%
GAGATTGTTTCGCCTTCCTT+CGG + chr2.1:25672983-25673002 None:intergenic 45.0%
GATTTCCTATCTGGCATGCT+GGG + chr2.1:25677045-25677064 None:intergenic 45.0%
GCCAGTAATATTTGATGCCG+GGG - chr2.1:25675729-25675748 MS.gene87006:intron 45.0%
GGTTTGAGTGAGTTTAGGAG+AGG - chr2.1:25674967-25674986 MS.gene87006:intron 45.0%
GTCGATCTCGACGTAAATGT+CGG + chr2.1:25672954-25672973 None:intergenic 45.0%
GTTAGTTGGAGAAGCAGACT+GGG - chr2.1:25675400-25675419 MS.gene87006:intron 45.0%
TCTAACTAACAACCTGACCG+AGG + chr2.1:25673090-25673109 None:intergenic 45.0%
TCTCATCCGACTTACTTCCT+CGG - chr2.1:25673070-25673089 MS.gene87006:CDS 45.0%
TGAAACCGGACACAGTTAGT+TGG - chr2.1:25675386-25675405 MS.gene87006:intron 45.0%
TGGGATTGTTCTGTTGCAGA+GGG - chr2.1:25674801-25674820 MS.gene87006:intron 45.0%
TTGGATTTGTGGGGTGGTAA+TGG + chr2.1:25672766-25672785 None:intergenic 45.0%
TTGGGAAAAGTAGGGAGAGA+AGG - chr2.1:25676208-25676227 MS.gene87006:intron 45.0%
! GAGTGGGTTTGAGTGAGTTT+AGG - chr2.1:25674962-25674981 MS.gene87006:intron 45.0%
! GGATCTGCCCTTTTCATAGA+AGG - chr2.1:25676745-25676764 MS.gene87006:CDS 45.0%
! GGTAATGGTGTGGTGATGAA+AGG + chr2.1:25672751-25672770 None:intergenic 45.0%
! GGTAGCCTTACTTCCTAAAC+AGG - chr2.1:25676109-25676128 MS.gene87006:intron 45.0%
! GTGGTGATGAAAGGGTTGTT+TGG + chr2.1:25672742-25672761 None:intergenic 45.0%
! GTGGTGCTAATGTGAGTTGT+TGG - chr2.1:25674734-25674753 MS.gene87006:intron 45.0%
!! AGTGAAAGTATCACCAGCTC+CGG + chr2.1:25676824-25676843 None:intergenic 45.0%
!! GTGTCTTGTTTGATCCCTGA+AGG - chr2.1:25676589-25676608 MS.gene87006:intron 45.0%
!! TCTCCCTACTTTTCCCAAGT+AGG + chr2.1:25676206-25676225 None:intergenic 45.0%
!!! TTTCACTGCTGCTTTTGCTG+TGG - chr2.1:25676837-25676856 MS.gene87006:CDS 45.0%
AAAAGTGGGCAGACGTTAGC+CGG - chr2.1:25673007-25673026 MS.gene87006:CDS 50.0%
AACTCTGCCACCTAAGCAGT+TGG - chr2.1:25674762-25674781 MS.gene87006:intron 50.0%
ACAACCTCCAACTGCTTAGG+TGG + chr2.1:25674772-25674791 None:intergenic 50.0%
ACCCGTAACCTCCAATCACA+TGG - chr2.1:25676469-25676488 MS.gene87006:intron 50.0%
ACCTGACCGAGGAAGTAAGT+CGG + chr2.1:25673079-25673098 None:intergenic 50.0%
ACTCCACCAGTCGTTGTTGT+CGG - chr2.1:25672917-25672936 MS.gene87006:intron 50.0%
ACTGATGCACTTCGAGATGG+TGG - chr2.1:25674613-25674632 MS.gene87006:intron 50.0%
ACTGGTGGAGTCTGTGATGA+TGG + chr2.1:25672908-25672927 None:intergenic 50.0%
AGTGAACTTGGTCGCCTTAC+AGG - chr2.1:25675814-25675833 MS.gene87006:intron 50.0%
AGTTACCGCCATGTGATTGG+AGG + chr2.1:25676480-25676499 None:intergenic 50.0%
ATACAGGCCGCAAAGAATGC+TGG - chr2.1:25675703-25675722 MS.gene87006:intron 50.0%
CCCCCGGCATCAAATATTAC+TGG + chr2.1:25675733-25675752 None:intergenic 50.0%
CGCCATGTGATTGGAGGTTA+CGG + chr2.1:25676474-25676493 None:intergenic 50.0%
CGTAACCTCCAATCACATGG+CGG - chr2.1:25676472-25676491 MS.gene87006:intron 50.0%
CTCGAAGTGCATCAGTGATG+AGG + chr2.1:25674609-25674628 None:intergenic 50.0%
CTCGACGTAAATGTCGGCAT+TGG + chr2.1:25672948-25672967 None:intergenic 50.0%
CTGCAACAGAACAATCCCAG+CGG + chr2.1:25674800-25674819 None:intergenic 50.0%
CTGGGATTGTTCTGTTGCAG+AGG - chr2.1:25674800-25674819 MS.gene87006:intron 50.0%
CTGGTGGAGTCTGTGATGAT+GGG + chr2.1:25672907-25672926 None:intergenic 50.0%
GCCATGTGATTGGAGGTTAC+GGG + chr2.1:25676473-25676492 None:intergenic 50.0%
GCGACCAAGTTCACTTTCGT+TGG + chr2.1:25675809-25675828 None:intergenic 50.0%
TGCTTAGGTGGCAGAGTTTG+AGG + chr2.1:25674760-25674779 None:intergenic 50.0%
TGGAGTTACCGCCATGTGAT+TGG + chr2.1:25676483-25676502 None:intergenic 50.0%
TGGCACACCAGCATTCTTTG+CGG + chr2.1:25675713-25675732 None:intergenic 50.0%
TTACGGCGAAACGCAGAACT+GGG + chr2.1:25672883-25672902 None:intergenic 50.0%
TTGATTAGCACCTTTCCCGC+CGG + chr2.1:25673029-25673048 None:intergenic 50.0%
TTGTGCTTGGATTTGTGGGG+TGG + chr2.1:25672772-25672791 None:intergenic 50.0%
TTTACGGCGAAACGCAGAAC+TGG + chr2.1:25672884-25672903 None:intergenic 50.0%
! AGTTGGAGCAGAAGGCACAA+CGG + chr2.1:25674659-25674678 None:intergenic 50.0%
! CACTTCGAGATGGTGGTGTT+CGG - chr2.1:25674620-25674639 MS.gene87006:intron 50.0%
! GACGTAAATGTCGGCATTGG+CGG + chr2.1:25672945-25672964 None:intergenic 50.0%
!! AATAGGTGCATCGATTCCCC+CGG + chr2.1:25675749-25675768 None:intergenic 50.0%
!! GAGGTTACGGGTTTGAGTTG+TGG + chr2.1:25676461-25676480 None:intergenic 50.0%
!! GGTGCTAATCAAGCTTGCTG+TGG - chr2.1:25673037-25673056 MS.gene87006:CDS 50.0%
!! TTTGTGGGGTGGTAATGGTG+TGG + chr2.1:25672761-25672780 None:intergenic 50.0%
AGAAGCTGCAGCAGCTGTTG+TGG + chr2.1:25676995-25677014 None:intergenic 55.0%
CAACAGAACAATCCCAGCGG+AGG + chr2.1:25674797-25674816 None:intergenic 55.0%
CCATGGTGTGGTTGAGGGAA+GGG - chr2.1:25676374-25676393 MS.gene87006:intron 55.0%
CCATTCCCAGCATGCCAGAT+AGG - chr2.1:25677037-25677056 MS.gene87006:CDS 55.0%
CCTATCTGGCATGCTGGGAA+TGG + chr2.1:25677040-25677059 None:intergenic 55.0%
GATCCGACAACAACGACTGG+TGG + chr2.1:25672923-25672942 None:intergenic 55.0%
GCATGACCAGTTGGAGCAGA+AGG + chr2.1:25674667-25674686 None:intergenic 55.0%
GTTGAGGGAAGGGTTGGACT+TGG - chr2.1:25676384-25676403 MS.gene87006:intron 55.0%
GTTGTGCCTTCTGCTCCAAC+TGG - chr2.1:25674658-25674677 MS.gene87006:intron 55.0%
TCCGACTTACTTCCTCGGTC+AGG - chr2.1:25673075-25673094 MS.gene87006:CDS 55.0%
TCTGCCACCTAAGCAGTTGG+AGG - chr2.1:25674765-25674784 MS.gene87006:intron 55.0%
TTGTTTCGCCTTCCTTCGGG+AGG + chr2.1:25672979-25672998 None:intergenic 55.0%
! CAGGTTGGGAACGATGCTCA+CGG - chr2.1:25674580-25674599 MS.gene87006:intron 55.0%
! TGGAGGTTGTTTCCTCCGCT+GGG - chr2.1:25674782-25674801 MS.gene87006:intron 55.0%
! TTGGAGGTTGTTTCCTCCGC+TGG - chr2.1:25674781-25674800 MS.gene87006:intron 55.0%
! TTTGCTGTGGCCTTGGTGGA+GGG - chr2.1:25676850-25676869 MS.gene87006:CDS 55.0%
!! TGCTTTTGCTGTGGCCTTGG+TGG - chr2.1:25676846-25676865 MS.gene87006:CDS 55.0%
!! TTTTGCTGTGGCCTTGGTGG+AGG - chr2.1:25676849-25676868 MS.gene87006:CDS 55.0%
!!! TGCTGCTTTTGCTGTGGCCT+TGG - chr2.1:25676843-25676862 MS.gene87006:CDS 55.0%
CCCTCAACCACACCATGGCA+GGG + chr2.1:25676372-25676391 None:intergenic 60.0%
CCCTGCCATGGTGTGGTTGA+GGG - chr2.1:25676369-25676388 MS.gene87006:intron 60.0%
CCCTTCCCTCAACCACACCA+TGG + chr2.1:25676377-25676396 None:intergenic 60.0%
CCTCAACCACACCATGGCAG+GGG + chr2.1:25676371-25676390 None:intergenic 60.0%
CTTGGACTTGCCCTCCACCA+AGG + chr2.1:25676863-25676882 None:intergenic 60.0%
GCCATGGTGTGGTTGAGGGA+AGG - chr2.1:25676373-25676392 MS.gene87006:intron 60.0%
GCGGATCCGACAACAACGAC+TGG + chr2.1:25672926-25672945 None:intergenic 60.0%
GGTGGAGGGCAAGTCCAAGA+AGG - chr2.1:25676864-25676883 MS.gene87006:CDS 60.0%
GGTGTGGTTGAGGGAAGGGT+TGG - chr2.1:25676378-25676397 MS.gene87006:intron 60.0%
GTACTATAGGGCCCCTGCCA+TGG - chr2.1:25676357-25676376 MS.gene87006:intron 60.0%
GTCGTTGACACAACCGGAGC+TGG - chr2.1:25676808-25676827 MS.gene87006:CDS 60.0%
TCCCTCAACCACACCATGGC+AGG + chr2.1:25676373-25676392 None:intergenic 60.0%
TTTCGCCTTCCTTCGGGAGG+CGG + chr2.1:25672976-25672995 None:intergenic 60.0%
AGTGGGCAGACGTTAGCCGG+CGG - chr2.1:25673010-25673029 MS.gene87006:CDS 65.0%
ATAGGGCCCCTGCCATGGTG+TGG - chr2.1:25676362-25676381 MS.gene87006:intron 65.0%
ATCGACCGCCTCCCGAAGGA+AGG - chr2.1:25672968-25672987 MS.gene87006:CDS 65.0%
CAGACGTTAGCCGGCGGGAA+AGG - chr2.1:25673016-25673035 MS.gene87006:CDS 65.0%
CCCCTGCCATGGTGTGGTTG+AGG - chr2.1:25676368-25676387 MS.gene87006:intron 65.0%
CGGCGAAACGCAGAACTGGG+TGG + chr2.1:25672880-25672899 None:intergenic 65.0%
GGCAGGGGCCCTATAGTACC+AGG + chr2.1:25676356-25676375 None:intergenic 65.0%
CGAGATCGACCGCCTCCCGA+AGG - chr2.1:25672964-25672983 MS.gene87006:CDS 70.0%
GTGGGCAGACGTTAGCCGGC+GGG - chr2.1:25673011-25673030 MS.gene87006:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 25672734 25677092 25672734 ID=MS.gene87006
chr2.1 mRNA 25672734 25677092 25672734 ID=MS.gene87006.t1;Parent=MS.gene87006
chr2.1 exon 25676730 25677092 25676730 ID=MS.gene87006.t1.exon1;Parent=MS.gene87006.t1
chr2.1 CDS 25676730 25677092 25676730 ID=cds.MS.gene87006.t1;Parent=MS.gene87006.t1
chr2.1 exon 25674968 25675243 25674968 ID=MS.gene87006.t1.exon2;Parent=MS.gene87006.t1
chr2.1 CDS 25674968 25675243 25674968 ID=cds.MS.gene87006.t1;Parent=MS.gene87006.t1
chr2.1 exon 25673932 25674117 25673932 ID=MS.gene87006.t1.exon3;Parent=MS.gene87006.t1
chr2.1 CDS 25673932 25674117 25673932 ID=cds.MS.gene87006.t1;Parent=MS.gene87006.t1
chr2.1 exon 25672922 25673117 25672922 ID=MS.gene87006.t1.exon4;Parent=MS.gene87006.t1
chr2.1 CDS 25672922 25673117 25672922 ID=cds.MS.gene87006.t1;Parent=MS.gene87006.t1
chr2.1 exon 25672734 25672825 25672734 ID=MS.gene87006.t1.exon5;Parent=MS.gene87006.t1
chr2.1 CDS 25672734 25672825 25672734 ID=cds.MS.gene87006.t1;Parent=MS.gene87006.t1
Gene Sequence

>MS.gene87006

ATGAACCAAACAACCCTTTCATCACCACACCATTACCACCCCACAAATCCAAGCACAAACATTTTCACCACCTCATCCAAACACATTAACCCAATCCAATTCCTTCGATTCAACACTCCAAATCGCCAAAACGACAAACAAAACCACCCAGTTCTGCGTTTCGCCGTAAACCCATCATCACAGACTCCACCAGTCGTTGTTGTCGGATCCGCCAATGCCGACATTTACGTCGAGATCGACCGCCTCCCGAAGGAAGGCGAAACAATCTCGGCGAAAAGTGGGCAGACGTTAGCCGGCGGGAAAGGTGCTAATCAAGCTTGCTGTGGTGCTAAATTATCTCATCCGACTTACTTCCTCGGTCAGGTTGTTAGTTAGATATAGTTGGATATTAGTTCAATATTGTTTAATGTAGTTTCTTAATTAGTTTTTGATTAGTTACAATTTGGTTAAATTAGTAGTTTACTTATAGTGTGTTTAGTTATGATTAGTTAGAATTTTGTTATATTAGTAATTTACTTATAGTGGATGAGCTAATAGCAGATAAGCTAACTAATTGAATTTGTAATGTTTGGTAAAATTAGCAATTAAAGTAGCTTACAAATATGAAATGACATAAAATTTGCGATTGTAGGAGTAAGATTGAGATAAAACGCGATAAGCTATAATCTACTTGAATTAGCTTATCACAAACTGATATAAGCTCATAAAAAATAAGCTATAAGCTCATGTAAAAATAAAAGTTACCAAACAGGTCTTTGTTAACTAGTTGAGCTTATAAGCTTATGCTATAAATCATAAGCTCAAATTTATGTCTTAGTTATGATTACTATGACTCTGTTGGTAAAAATAGCTAGTAACTGATAAATTAGATGTTTTAGTTGATGAGTTAACTTATAGTGGATAAGCTAGCCGGTTGAATTTGTAGTGTTTGGTGAAATTAGAAGTTGAATTTGAAATAGATTATAATTATGAAAAATTATGAAAAGACATAAAAAAAATATTTAATTTGTTTTAATTAAGATAACAGTGGTAAAATTTGAGATAAAAAATGATAACCTACACACTTTAAGCTATACGGTACTTCAAGCAGCCTATCAAAAAATGCGGTAAGCTAGTAAAAATAACCGATAAGCTTGTGAGAAAATGTTGGTTATCAAACAGTACTTTTTTAGTCATATGAGCTTATCAGCTAGATTTATTGTGCTTGCCGAACAGACCATAAATTTGAATTAGTTGTGTTTAGTTATGATTAGTTTGAAGATGGTTATATTAGTTTACTGATTAGTGCGATTAGTTATGATTAGTTTGAAGTTGGTTATATTCGTTATACTTTATAGTTGATAACATATAAGTTAGTTGATTGAAGTTGCAGTGTTTAGTAAAATTAGTGGTTGAACTAGATTATAAATAGGAAATGACATCAAAAAGATATGTTAACTAATATTTAAAAAAAATATAAGCTCTACGCTTTAAGCTATAAGATACTTATCAAAATATGTTGTAAGCTATTAAAAGTAAGCTATACGCTAGTGACAAAGTGATGGTTATCAAACAAGACTTTTTTTAGTCATACGAGCTTATAAGATATAAGCCTATAGCTTATTGTGCTTGTCAAACAGACCCTAAATTAGAATTAGTTGTGATTAATTAGCAGTTGGTTGTATTAATCTACTAGTTAGTGTGAGTAGTTATCATTATGTAGAAGTTGGTTATATTAGTTATACTTTATGATCACTAAATAAGTTGCATCCTCATTGTATCAATTTTTTCGCGTATCAATTTCAAAATCAATCGTTCTATGATTTTTATATTTTGCTTTATTTTTGTTCTACTATGATTCTCAACGCAGGTTGGGAACGATGCTCACGGAAACCTCATCACTGATGCACTTCGAGATGGTGGTGTTCGGCTTGATTATCTTGCCGTTGTGCCTTCTGCTCCAACTGGTCATGCAGTTGTTATGCTTCAGTCTAGTGGCCAGAATTCTATTGTTATTGTTGGTGGTGCTAATGTGAGTTGTTGGCCTCAAACTCTGCCACCTAAGCAGTTGGAGGTTGTTTCCTCCGCTGGGATTGTTCTGTTGCAGAGGGAGATCCCTGATTTTGTTAATGTTCAAGTGGCAAAGGTTGGTACTTTAGATTTTCTGTTGAGAAAATGTGAAATTGTCTTATTTCATTTATTTTTGACTTTTTGTTGACAATTGCAATAGCTAGTTTTGATCTGGAATTGAGTGGGTTTGAGTGAGTTTAGGAGAGGTTAACTTGAATAGAATTGATTTTGTAGATATGATTATGTTAAAACTGAGTTTGAAGTGACCTATTGCTGAACATTTCTTCAAAATTGATTATGTTAGATAAGTGCATGTTTGGTTTCACTTTGAGGAGGCAAAATTGATTGAATCATACTGTTGTGTTTGAGTTTTCTCGGGTGATGTTGATCTTGCCTCCAAACTTGAATCTAATTTGAAGCTGAGATTTGAAATTTTTGTAATTTTGCTTCCAAACATAAATAACTTTACATGCAATTTAATAAAAATGAAATTTATTCAAAATTAATTTTCACCATTGTAGTATGCATGAGACTGAGAGTAACAAAAAATATTTGTATTTTTATACTAGGCAGAAGTACAATTAATTCTAATATTTTATACTGTGAAACCGGACACAGTTAGTTGGAGAAGCAGACTGGGAGTGATTTTGTAGACCTCTTTATAAGAAGTGGCCATTTGAAAATAGTGTCCTACACGAGTCATGAATTCACGACCTTGTTGCAAATAAATTTGTAGTGTATTTGCTTCAGATATGAATGCCAGAGTGCTGGTCTATTTTTTTATAATTATTTTATTGAAGTCTAGTGGAGAAACTTATCTGCTATGCACTTCGTACGGTGATTATATGATATGTTTCACGTGAATCACATGTTCCATCCGCAAGATTCTTAACTAGCCAAAATGTATTTTGCTCTGGTGCATACAGGCCGCAAAGAATGCTGGTGTGCCAGTAATATTTGATGCCGGGGGAATCGATGCACCTATTCCACAAGAATTATTGGATTTTGTTGATATTTTTAGTCCCAACGAAAGTGAACTTGGTCGCCTTACAGGACTTCCAACTGAAAGTTTTGAAGAGATTACACAGGCTGCTGCAAAATGCCATAAATTGGTGAGTTAAAGTAGTGCCTTACGGATGTTCTACTTGAATGCTATATCCATTGCCATATTCGTTTTTAATATGCATGCATATGTGGCATTAGAAGTGTCACAGCAGAAAAAAAACAATATCTGTGTAGATAAGAAAGAAATGGTCTTTTTGTAGATATGAAAGAAATGATCATGGTATAGATAATCATTAGGGGTCTCACTGCTTTCTTTTCTTTGGTAGCCTTACTTCCTAAACAGGGTTTTGGAATTTTTTTTTTTGTGTTGACTGTTGAGGGAAATATAGCTGTTTTGTCCTAATGCACTTTACAACCTACTTGGGAAAAGTAGGGAGAGAAGGATTATAATTTTGAGTTGACCCACCTTTTCCTTAAATCAAATTAAATGCACCATAAGGTTAAATTATGGGGGGAAAAGGTAACTAGTAACAAATAAACTATTGAATTTGCTAATATAGTATAACCTGGTACTATAGGGCCCCTGCCATGGTGTGGTTGAGGGAAGGGTTGGACTTGGATCTATTGTAGACACTAGACATCCTTGTCTTCCACTTGCAAAAGTTTGATTCCACAACTCAAACCCGTAACCTCCAATCACATGGCGGTAACTCCAACTATTGCACTAAAACTGCCTTTCAAACTATTGAATTAAATTTTCTATTTATTGACTGTGCCATCTATTTTACATTGTATCTTCAGGTGTCTTGTTTGATCCCTGAAGGCTTGTAGATTGATGTTGCTTTTGTCTCCGTGACATTAAAAGAATCTCAGTGGTTACTTATCTGGCGTTTTCTTAATCAAAAAATTCTGAAATTTCAGGGTGTTAAGCAAGTTCTCGTGAAACTTGGTGCCAAAGGATCTGCCCTTTTCATAGAAGGAGAAGAACCAATTCAGCAACCTGCCATTTTTGCTAAAACAGTCGTTGACACAACCGGAGCTGGTGATACTTTCACTGCTGCTTTTGCTGTGGCCTTGGTGGAGGGCAAGTCCAAGAAGGAATGCCTCAGATTTGCCGGTATGTGTTGCAGAATGTATTTTGCTGTGTATCTTCTTGGACTTTTCTCTGTTGAAAAATGTGCTTAACTAATATGTGAGATTTTTACCACAACAGCTGCTGCAGCTTCTCTCTGTGTTCAAGTCAAGGGAGCCATTCCCAGCATGCCAGATAGGAAATCTGTTCTTGAACTTCTTAATCATCATTGA
Protein sequence

>MS.gene87006.t1

MNQTTLSSPHHYHPTNPSTNIFTTSSKHINPIQFLRFNTPNRQNDKQNHPVLRFAVNPSSQTPPVVVVGSANADIYVEIDRLPKEGETISAKSGQTLAGGKGANQACCGAKLSHPTYFLGQVGNDAHGNLITDALRDGGVRLDYLAVVPSAPTGHAVVMLQSSGQNSIVIVGGANVSCWPQTLPPKQLEVVSSAGIVLLQREIPDFVNVQVAKAAKNAGVPVIFDAGGIDAPIPQELLDFVDIFSPNESELGRLTGLPTESFEEITQAAAKCHKLGVKQVLVKLGAKGSALFIEGEEPIQQPAIFAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQVKGAIPSMPDRKSVLELLNHH