AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88000.t1 MTR_4g029620 80.186 429 35 5 1 429 1 379 1.03e-168 479
MS.gene88000.t1 MTR_4g029620 85.479 365 43 2 85 449 25 379 1.05e-150 433
MS.gene88000.t1 MTR_4g029620 72.222 90 25 0 359 448 24 113 5.28e-21 94.7
MS.gene88000.t1 MTR_4g029550 86.478 318 33 2 1 318 1 308 5.14e-125 365
MS.gene88000.t1 MTR_4g029550 86.780 295 31 2 129 420 21 310 1.15e-117 347
MS.gene88000.t1 MTR_4g029550 87.931 290 30 1 151 440 26 310 1.72e-117 346
MS.gene88000.t1 MTR_4g029550 87.241 290 32 1 91 380 26 310 3.20e-116 343
MS.gene88000.t1 MTR_4g029550 86.102 295 31 2 114 408 24 308 6.41e-116 342
MS.gene88000.t1 MTR_4g029550 87.197 289 32 1 161 449 26 309 6.84e-116 342
MS.gene88000.t1 MTR_4g029550 87.500 288 31 1 101 388 26 308 2.19e-115 341
MS.gene88000.t1 MTR_4g029550 87.241 290 32 1 111 400 26 310 2.69e-115 340
MS.gene88000.t1 MTR_4g029550 88.302 265 31 0 185 449 25 289 4.00e-108 322
MS.gene88000.t1 MTR_4g029550 72.917 96 21 1 359 449 24 119 1.37e-23 100
MS.gene88000.t1 MTR_4g029630 81.448 221 36 1 149 369 3 218 1.05e-81 251
MS.gene88000.t1 MTR_4g029630 80.543 221 38 1 139 359 3 218 1.79e-80 248
MS.gene88000.t1 MTR_4g029630 81.279 219 36 1 161 379 5 218 1.91e-80 248
MS.gene88000.t1 MTR_4g029630 81.818 220 35 1 169 388 3 217 1.01e-79 246
MS.gene88000.t1 MTR_4g029630 79.545 220 40 1 129 348 3 217 1.10e-79 246
MS.gene88000.t1 MTR_4g029630 81.308 214 40 0 195 408 4 217 1.35e-79 246
MS.gene88000.t1 MTR_4g029630 80.465 215 42 0 185 399 4 218 1.65e-78 243
MS.gene88000.t1 MTR_4g029630 81.221 213 40 0 206 418 5 217 1.80e-78 243
MS.gene88000.t1 MTR_4g029630 78.505 214 46 0 236 449 5 218 2.92e-78 243
MS.gene88000.t1 MTR_4g029630 78.636 220 42 1 119 338 3 217 9.48e-78 241
MS.gene88000.t1 MTR_4g029630 79.343 213 44 0 216 428 5 217 8.12e-77 239
MS.gene88000.t1 MTR_4g029630 78.440 218 42 1 81 298 5 217 7.82e-76 236
MS.gene88000.t1 MTR_4g029630 77.273 220 45 1 69 288 3 217 4.16e-75 234
MS.gene88000.t1 MTR_4g029630 76.818 220 46 1 99 318 3 217 1.65e-74 233
MS.gene88000.t1 MTR_4g029630 76.147 218 47 1 91 308 5 217 6.35e-74 231
MS.gene88000.t1 MTR_4g029630 75.342 219 49 1 41 259 5 218 2.75e-73 229
MS.gene88000.t1 MTR_4g029630 76.147 218 47 1 51 268 5 217 2.81e-73 229
MS.gene88000.t1 MTR_4g029630 75.688 218 48 1 31 248 5 217 5.03e-73 229
MS.gene88000.t1 MTR_4g029630 74.766 214 49 1 25 238 9 217 3.04e-70 222
MS.gene88000.t1 MTR_4g029630 72.222 90 25 0 25 114 129 218 5.17e-24 100
MS.gene88000.t1 MTR_4g029630 67.442 86 23 1 369 449 3 88 1.24e-17 82.0
MS.gene88000.t1 MTR_4g029600 87.374 198 20 1 151 348 26 218 5.09e-70 221
MS.gene88000.t1 MTR_4g029600 86.364 198 22 1 141 338 26 218 5.66e-70 221
MS.gene88000.t1 MTR_4g029600 70.149 268 30 2 1 268 1 218 1.93e-69 220
MS.gene88000.t1 MTR_4g029600 84.236 203 24 2 129 328 21 218 1.34e-68 218
MS.gene88000.t1 MTR_4g029600 85.500 200 24 1 161 360 26 220 4.26e-68 216
MS.gene88000.t1 MTR_4g029600 83.495 206 24 2 195 400 25 220 1.37e-67 215
MS.gene88000.t1 MTR_4g029600 84.000 200 27 1 171 370 26 220 1.21e-66 213
MS.gene88000.t1 MTR_4g029600 80.976 205 29 2 114 318 24 218 9.84e-66 210
MS.gene88000.t1 MTR_4g029600 82.843 204 25 2 185 388 25 218 1.63e-65 210
MS.gene88000.t1 MTR_4g029600 81.313 198 32 1 101 298 26 218 1.01e-64 207
MS.gene88000.t1 MTR_4g029600 79.024 205 33 2 236 440 26 220 1.02e-63 205
MS.gene88000.t1 MTR_4g029600 80.808 198 33 1 81 278 26 218 3.28e-63 204
MS.gene88000.t1 MTR_4g029600 80.808 198 33 1 111 308 26 218 3.46e-63 204
MS.gene88000.t1 MTR_4g029600 80.488 205 30 2 216 420 26 220 4.67e-63 203
MS.gene88000.t1 MTR_4g029600 77.941 204 35 2 246 449 26 219 1.22e-61 200
MS.gene88000.t1 MTR_4g029600 74.737 95 24 0 26 120 126 220 2.55e-21 92.4
MS.gene88000.t1 MTR_4g029600 65.934 91 21 2 359 449 24 104 1.35e-15 76.3
MS.gene88000.t1 MTR_6g011410 42.138 159 92 0 173 331 69 227 1.88e-34 129
MS.gene88000.t1 MTR_6g011410 41.509 159 93 0 183 341 69 227 2.84e-34 129
MS.gene88000.t1 MTR_6g011410 40.881 159 94 0 143 301 69 227 2.90e-34 129
MS.gene88000.t1 MTR_6g011410 42.581 155 89 0 207 361 73 227 3.21e-34 128
MS.gene88000.t1 MTR_6g011410 41.509 159 93 0 163 321 69 227 3.24e-34 128
MS.gene88000.t1 MTR_6g011410 42.138 159 92 0 193 351 69 227 4.02e-34 128
MS.gene88000.t1 MTR_6g011410 40.881 159 94 0 133 291 69 227 4.37e-34 128
MS.gene88000.t1 MTR_6g011410 40.881 159 94 0 123 281 69 227 5.25e-34 128
MS.gene88000.t1 MTR_6g011410 41.509 159 93 0 153 311 69 227 6.72e-34 127
MS.gene88000.t1 MTR_6g011410 41.558 154 90 0 217 370 73 226 8.17e-33 125
MS.gene88000.t1 MTR_6g011410 43.871 155 87 0 192 346 73 227 4.73e-32 122
MS.gene88000.t1 MTR_6g011410 42.767 159 91 0 208 366 69 227 6.42e-32 122
MS.gene88000.t1 MTR_6g011410 39.623 159 96 0 103 261 69 227 1.35e-31 121
MS.gene88000.t1 MTR_6g011410 42.138 159 92 0 228 386 69 227 1.91e-31 121
MS.gene88000.t1 MTR_6g011410 40.000 155 93 0 227 381 73 227 3.85e-31 120
MS.gene88000.t1 MTR_6g011410 40.260 154 92 0 237 390 73 226 1.86e-30 118
MS.gene88000.t1 MTR_6g011410 39.355 155 94 0 247 401 73 227 1.98e-30 118
MS.gene88000.t1 MTR_6g011410 38.854 157 96 0 65 221 71 227 3.98e-30 117
MS.gene88000.t1 MTR_6g011410 38.710 155 95 0 287 441 73 227 5.44e-30 117
MS.gene88000.t1 MTR_6g011410 39.623 159 96 0 248 406 69 227 8.16e-30 116
MS.gene88000.t1 MTR_6g011410 38.065 155 96 0 257 411 73 227 1.33e-29 116
MS.gene88000.t1 MTR_6g011410 36.313 179 94 1 73 251 69 227 1.71e-29 115
MS.gene88000.t1 MTR_6g011410 39.355 155 94 0 267 421 73 227 2.20e-29 115
MS.gene88000.t1 MTR_6g011410 38.710 155 95 0 277 431 73 227 2.69e-29 115
MS.gene88000.t1 MTR_6g011410 37.419 155 97 0 62 216 73 227 4.64e-29 114
MS.gene88000.t1 MTR_6g011410 36.585 164 99 1 43 206 69 227 5.74e-29 114
MS.gene88000.t1 MTR_6g011410 38.125 160 94 1 72 231 73 227 5.98e-29 114
MS.gene88000.t1 MTR_6g011410 35.976 164 100 1 33 196 69 227 8.68e-29 114
MS.gene88000.t1 MTR_6g011410 37.580 157 98 0 55 211 71 227 6.70e-28 111
MS.gene88000.t1 MTR_6g011410 38.125 160 94 1 112 271 73 227 1.21e-27 110
MS.gene88000.t1 MTR_6g011410 37.255 153 96 0 297 449 73 225 6.15e-27 108
MS.gene88000.t1 MTR_6g011410 36.154 130 78 1 318 447 69 193 4.74e-19 86.7
MS.gene88000.t1 MTR_4g029760 40.310 129 58 3 1 129 1 110 6.53e-15 71.2
MS.gene88000.t1 MTR_4g029760 47.059 85 43 2 231 314 27 110 1.37e-11 61.6
MS.gene88000.t1 MTR_4g029760 48.235 85 42 2 251 334 27 110 3.41e-11 60.5
MS.gene88000.t1 MTR_4g029760 51.282 78 36 2 271 347 27 103 4.06e-11 60.5
MS.gene88000.t1 MTR_3g415650 46.465 99 50 2 1 96 1 99 4.56e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88000.t1 AT3G22142 44.379 507 201 6 24 449 885 1391 2.18e-90 300
MS.gene88000.t1 AT3G22142 44.813 482 200 4 30 445 876 1357 6.16e-89 296
MS.gene88000.t1 AT3G22142 41.353 532 206 5 24 449 770 1301 8.22e-86 287
MS.gene88000.t1 AT3G22142 41.165 532 207 6 24 449 760 1291 2.12e-84 283
MS.gene88000.t1 AT3G22142 42.075 530 201 6 26 449 822 1351 9.73e-84 281
MS.gene88000.t1 AT3G22142 41.682 547 198 6 24 449 650 1196 1.28e-83 281
MS.gene88000.t1 AT3G22142 43.376 468 189 4 24 415 930 1397 1.76e-83 280
MS.gene88000.t1 AT3G22142 40.525 533 206 6 24 445 735 1267 3.14e-83 280
MS.gene88000.t1 AT3G22142 40.215 557 202 6 24 449 680 1236 5.95e-83 279
MS.gene88000.t1 AT3G22142 40.108 556 202 7 25 449 666 1221 1.48e-81 275
MS.gene88000.t1 AT3G22142 40.000 565 198 7 26 449 572 1136 7.23e-79 267
MS.gene88000.t1 AT3G22142 39.927 546 202 7 30 449 626 1171 8.19e-79 267
MS.gene88000.t1 AT3G22142 37.391 575 210 7 25 449 501 1075 7.00e-73 249
MS.gene88000.t1 AT3G22142 37.522 581 208 7 24 449 370 950 1.09e-72 249
MS.gene88000.t1 AT3G22142 36.379 602 207 9 24 449 520 1121 1.63e-71 246
MS.gene88000.t1 AT3G22142 36.860 586 210 7 24 449 355 940 1.69e-70 243
MS.gene88000.t1 AT3G22142 36.139 606 207 8 24 449 415 1020 3.80e-70 242
MS.gene88000.t1 AT3G22142 40.962 520 205 7 30 449 328 845 1.13e-69 240
MS.gene88000.t1 AT3G22142 45.897 390 173 5 21 372 1005 1394 2.39e-69 239
MS.gene88000.t1 AT3G22142 37.809 566 207 7 25 445 401 966 3.77e-69 239
MS.gene88000.t1 AT3G22142 37.478 571 210 9 24 449 202 770 6.45e-65 227
MS.gene88000.t1 AT3G22142 49.362 235 119 0 18 252 1160 1394 2.50e-40 155
MS.gene88000.t1 AT1G54970 49.383 162 61 7 155 304 28 180 3.28e-16 80.1
MS.gene88000.t1 AT1G54970 47.853 163 67 7 260 414 28 180 7.11e-14 72.8
MS.gene88000.t1 AT1G54970 44.172 163 69 6 290 444 28 176 2.34e-13 71.2
MS.gene88000.t1 AT1G54970 38.308 201 89 9 1 189 3 180 1.28e-12 69.3
MS.gene88000.t1 AT1G54970 45.405 185 75 8 280 448 28 202 1.95e-12 68.6

Find 193 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTGGTGGCTTGTAAAT+TGG 0.089446 4.3:+70150405 None:intergenic
TCTACTGGTGGCTTGTAAAT+TGG 0.089446 4.3:+70150615 None:intergenic
TCAACTGGTGGCTTGTAAAT+TGG 0.137708 4.3:+70149940 None:intergenic
TCAAATGGTGGTTTGTAAAT+TGG 0.159851 4.3:+70149730 None:intergenic
TCTACTGGTGGCTTGTAAAC+TGG 0.163243 4.3:+70150000 None:intergenic
TCAACTGGTGGCTTGTAAAT+TGG 0.189823 4.3:+70150315 None:intergenic
TCTATTGGTGGCTTATAAAC+TGG 0.189984 4.3:+70150060 None:intergenic
TCTACTGGCGGTTTGTAAAT+TGG 0.198828 4.3:+70149670 None:intergenic
CAACTGGTGGCTTGTAAATT+GGG 0.242860 4.3:+70149941 None:intergenic
CTACTGGTGGCTTGTAAATT+GGG 0.242860 4.3:+70150406 None:intergenic
CTACTGGTGGCTTGTAAATT+GGG 0.242860 4.3:+70150616 None:intergenic
TCTACTGGCGGCTTGTAAAT+TGG 0.245316 4.3:+70150525 None:intergenic
TACACAGGTGGTTTCTCTAT+TGG 0.269356 4.3:+70150045 None:intergenic
TCTACGGGTGGTTTATAAAC+TGG 0.273009 4.3:+70150705 None:intergenic
TCAACCGGTGGCTTGTAAAT+AGG 0.274750 4.3:+70150255 None:intergenic
TCAACTGGAGGTTTATAAAA+TGG 0.292450 4.3:+70149550 None:intergenic
TCTACTGGTGGTTTGTATAT+AGG 0.305973 4.3:+70150375 None:intergenic
TCTACAGGTGGTTTGTAAAC+TGG 0.337913 4.3:+70149850 None:intergenic
CTCTACAGGTGGCTCGTAGA+TGG 0.340186 4.3:+70149609 None:intergenic
TTCAGGAGGTTTATCATAGT+TGG 0.347213 4.3:+70150752 None:intergenic
TCTACAGGTGGTTTGTAAAC+AGG 0.351216 4.3:+70149910 None:intergenic
TACACTGGAGGTTTCAAAAC+TGG 0.364367 4.3:+70150105 None:intergenic
TCGACTGGTGGCTTGTAAAC+AGG 0.366370 4.3:+70150285 None:intergenic
CTACTGGTGGCTTGTAAACT+GGG 0.367097 4.3:+70150001 None:intergenic
TCATAGTTGGCAAGCCCCTT+AGG 0.371862 4.3:+70150765 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4.3:+70149700 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4.3:+70149760 None:intergenic
TAGACAGGAGGTTTCTCAAC+TGG 0.373909 4.3:+70150195 None:intergenic
TGCTCTCTTTGTCATCCCTA+AGG 0.380772 4.3:-70150781 MS.gene88000:CDS
TAAACGGGTGGCTGGTAAAC+AGG 0.384458 4.3:+70150225 None:intergenic
TCAACCGGTGGCTTGTACAC+TGG 0.388370 4.3:+70149820 None:intergenic
TCTACAGGTGGCTCGTAGAT+GGG 0.391692 4.3:+70149610 None:intergenic
TATATAGGTGGCTTCTCTAC+TGG 0.392320 4.3:+70150390 None:intergenic
TACACAGGTGGCTTCTCTAC+TGG 0.396236 4.3:+70150600 None:intergenic
TAAACAGGTGGCTTCTCAAC+TGG 0.397587 4.3:+70149925 None:intergenic
TATACAGGTGGTTTCTCTAC+TGG 0.398657 4.3:+70149985 None:intergenic
TCGTATGGAGGTTTGTAAAC+AGG 0.400341 4.3:+70149520 None:intergenic
CTATTGGTGGCTTATAAACT+GGG 0.405210 4.3:+70150061 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4.3:+70149685 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4.3:+70149745 None:intergenic
TAAACAGGAGGCTCCTCAAC+TGG 0.410023 4.3:+70149535 None:intergenic
TACACGGGTGGTTTCTCTAC+TGG 0.410414 4.3:+70150510 None:intergenic
TCTACAGGTGGCTTGTAAAC+CGG 0.412714 4.3:+70150555 None:intergenic
GCTCTCTTTGTCATCCCTAA+GGG 0.413698 4.3:-70150780 MS.gene88000:CDS
TACACAGGTGGTTTCTCAAC+CGG 0.415384 4.3:+70149805 None:intergenic
TCAAATGGTGGCTTGTACAC+AGG 0.426920 4.3:+70149640 None:intergenic
TAAACAGGAGGTTTCTCAAC+TGG 0.426984 4.3:+70150300 None:intergenic
TCAACTGGTGGATTATATTC+AGG 0.429790 4.3:+70150735 None:intergenic
TACACAGGTGGTTCCTCTAC+GGG 0.434677 4.3:+70150690 None:intergenic
AAAACTGGTGGCTTGTACAC+CGG 0.435203 4.3:+70150120 None:intergenic
TAAACTGGAGGCTTCTCAAC+CGG 0.439109 4.3:+70149865 None:intergenic
TCTACAGGTGGCTTGTACAC+AGG 0.439719 4.3:+70149790 None:intergenic
TCAACTGGTGGCTTGTACAC+AGG 0.445716 4.3:+70150030 None:intergenic
GGATGACAAAGAGAGCAAAA+AGG 0.449281 4.3:+70150787 None:intergenic
TAGACGGGAGGTTGCTCTAC+TGG 0.451097 4.3:+70150360 None:intergenic
TCAACCGGCGGCTTGTATAC+AGG 0.452576 4.3:+70149970 None:intergenic
TACACTGGAGGCTTCTCTAC+AGG 0.453735 4.3:+70149835 None:intergenic
ACAGGTGGTTTCTCTATTGG+TGG 0.459500 4.3:+70150048 None:intergenic
TACACCGGTGGTTTCTCTAC+AGG 0.466097 4.3:+70149895 None:intergenic
GTACACAGGTGGTTCCTCTA+CGG 0.466134 4.3:+70150689 None:intergenic
CATAGTTGGCAAGCCCCTTA+GGG 0.469706 4.3:+70150766 None:intergenic
CTACGGGTGGTTTATAAACT+GGG 0.470080 4.3:+70150706 None:intergenic
TACGTAGGAGGTTTCTCTAC+AGG 0.471880 4.3:+70149595 None:intergenic
TACACCGGTGGCTTCTCTAC+AGG 0.472138 4.3:+70150135 None:intergenic
TACACCGGTGGCTTCTCTAC+AGG 0.472138 4.3:+70150165 None:intergenic
TCTACAGGTGGCTTGTACAC+CGG 0.474966 4.3:+70150150 None:intergenic
TCAACTGGTGGTTTGTACAC+TGG 0.475280 4.3:+70150090 None:intergenic
TCTACAGGTGGCTTGTAGAC+AGG 0.477895 4.3:+70150180 None:intergenic
CTACAGGTGGCTCGTAGATG+GGG 0.478069 4.3:+70149611 None:intergenic
TCAACCGGTGGCTTGTACAC+CGG 0.478251 4.3:+70149880 None:intergenic
TAAACCGGAGGTTTCTCTAC+TGG 0.478885 4.3:+70150570 None:intergenic
TAAACAGGTGGAATCTCAAA+TGG 0.481658 4.3:+70149715 None:intergenic
CTCGAACGGTGGTTTATACA+CGG 0.483753 4.3:+70150494 None:intergenic
AACTGGTGGCTTGTAAATTG+GGG 0.485575 4.3:+70149942 None:intergenic
TACTGGTGGCTTGTAAATTG+GGG 0.485575 4.3:+70150407 None:intergenic
TACTGGTGGCTTGTAAATTG+GGG 0.485575 4.3:+70150617 None:intergenic
CTCTACCGGTGGCTTATAGA+CGG 0.485999 4.3:+70150344 None:intergenic
AGGTAAGGTGGCCTCTAGAA+TGG 0.486082 4.3:+70149475 None:intergenic
AGACAGGAGGTTTCTCAACT+GGG 0.490831 4.3:+70150196 None:intergenic
AATGGTGGTTTGTAAATTGG+AGG 0.494893 4.3:+70149733 None:intergenic
TCGATTGGTGGATGGTAGAC+CGG 0.497835 4.3:+70150645 None:intergenic
TAAATTGGAGGCTTCTCTAC+CGG 0.500553 4.3:+70150330 None:intergenic
ACTGGTGGCTTGTAAATTGG+AGG 0.504597 4.3:+70150318 None:intergenic
TAAACAGGAGGTTTCTCAAC+CGG 0.505111 4.3:+70150240 None:intergenic
ACTGGCGGTTTGTAAATTGG+AGG 0.505224 4.3:+70149673 None:intergenic
TAGAATGGAGGAGTGTAAAT+CGG 0.506624 4.3:+70149490 None:intergenic
GGGGCTTGTAAACGGGTGGC+TGG 0.508050 4.3:+70150217 None:intergenic
AATGGAGGTTTCTCGAACGG+TGG 0.510085 4.3:+70150483 None:intergenic
TCTACTGGTGGTTTGTACAC+AGG 0.513567 4.3:+70150585 None:intergenic
TAAATAGGAGGTTTCTCGAC+TGG 0.516158 4.3:+70150270 None:intergenic
TAAATCGGTGGCTTCTCGTA+TGG 0.517724 4.3:+70149505 None:intergenic
GAGCAGCACTAGGAAGTTTG+AGG 0.517932 4.3:+70150809 None:intergenic
TACACAGGTGGAAACTCTAC+TGG 0.521675 4.3:+70149655 None:intergenic
TCTACCGGTGGATGGTAGAA+TGG 0.522100 4.3:+70150465 None:intergenic
TCAAATGGTGGTTTGTACAC+AGG 0.526891 4.3:+70150675 None:intergenic
CACAATGGTGGTATCTCTAC+CGG 0.529237 4.3:+70150450 None:intergenic
ATTGGTGGCTTATAAACTGG+GGG 0.530690 4.3:+70150063 None:intergenic
TACAGGTGGCTCGTAGATGG+GGG 0.540383 4.3:+70149612 None:intergenic
TAGACCGGAGGTTTCTCAAA+TGG 0.542548 4.3:+70150660 None:intergenic
CTCTCTTTGTCATCCCTAAG+GGG 0.544711 4.3:-70150779 MS.gene88000:CDS
ACTGGCGGCTTGTAAATTGG+AGG 0.546760 4.3:+70150528 None:intergenic
ACTGGTGGTTTGTATATAGG+TGG 0.547921 4.3:+70150378 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.550477 4.3:+70149943 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.550477 4.3:+70150618 None:intergenic
GTCGGAGGCTTGTACGTAGG+AGG 0.552169 4.3:+70149583 None:intergenic
ACCGGAGGTTTCTCTACTGG+TGG 0.553526 4.3:+70150573 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4.3:+70149688 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4.3:+70149748 None:intergenic
TCTACCGGTGGCTTATAGAC+GGG 0.564913 4.3:+70150345 None:intergenic
TCAGTCGGAGGCTTGTACGT+AGG 0.565292 4.3:+70149580 None:intergenic
ATCGGTGGCTTCTCGTATGG+AGG 0.565965 4.3:+70149508 None:intergenic
TAAAATGGTGGATTGTCAGT+CGG 0.566011 4.3:+70149565 None:intergenic
TACTGGTGGCTTGTAAACTG+GGG 0.566731 4.3:+70150002 None:intergenic
ACCGGTGGCTTGTAAATAGG+AGG 0.567768 4.3:+70150258 None:intergenic
ACCGGTGGCTTGTACACCGG+TGG 0.571366 4.3:+70149883 None:intergenic
ACCTCCTATTTACAAGCCAC+CGG 0.571491 4.3:-70150259 MS.gene88000:CDS
ACCGGTGGTTTCTCTACAGG+TGG 0.572000 4.3:+70149898 None:intergenic
ACCGGAGGTTTCTCAAATGG+TGG 0.574468 4.3:+70150663 None:intergenic
GCCTCCAGTGTACAAGCCAC+CGG 0.576688 4.3:-70149824 MS.gene88000:CDS
TATTGGTGGCTTATAAACTG+GGG 0.579551 4.3:+70150062 None:intergenic
ACAGGTGGCTTGTACACAGG+TGG 0.580231 4.3:+70149793 None:intergenic
TCGAACGGTGGTTTATACAC+GGG 0.581016 4.3:+70150495 None:intergenic
ACAGGTGGTTTCTCTACTGG+TGG 0.582399 4.3:+70149988 None:intergenic
ACTGGTGGTTTGTACACTGG+AGG 0.583409 4.3:+70150093 None:intergenic
ACTGGAGGTTTATAAAATGG+TGG 0.586806 4.3:+70149553 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.588708 4.3:+70150408 None:intergenic
ACTGGAGGCTTCTCTACAGG+TGG 0.596815 4.3:+70149838 None:intergenic
ATAGGTGGCTTCTCTACTGG+TGG 0.598642 4.3:+70150393 None:intergenic
GTGGTATCTCTACCGGTGGA+TGG 0.599408 4.3:+70150457 None:intergenic
ACTGGTGGCTTGTAAACTGG+GGG 0.600648 4.3:+70150003 None:intergenic
ATTGGAGGCTTCTCTACCGG+TGG 0.601048 4.3:+70150333 None:intergenic
ATAGGAGGTTTCTCGACTGG+TGG 0.603727 4.3:+70150273 None:intergenic
GACAGGAGGTTTCTCAACTG+GGG 0.603997 4.3:+70150197 None:intergenic
AACGGTGGTTTATACACGGG+TGG 0.605717 4.3:+70150498 None:intergenic
ACTGGTGGTTTGTACACAGG+TGG 0.607164 4.3:+70150588 None:intergenic
AGTTTATAAACCACCCGTAG+AGG 0.608035 4.3:-70150703 MS.gene88000:CDS
ACAGGTGGCTTCTCTACTGG+TGG 0.608297 4.3:+70150603 None:intergenic
ACCACCATTTGAGAAACCTC+CGG 0.609108 4.3:-70150664 MS.gene88000:CDS
ACTGGTGGCTTGTACACAGG+TGG 0.611896 4.3:+70150033 None:intergenic
ACCTCCCGTCTATAAGCCAC+CGG 0.614032 4.3:-70150349 MS.gene88000:CDS
ACTGGTGGATTATATTCAGG+AGG 0.614972 4.3:+70150738 None:intergenic
ACCGGTGGCTTCTCTACAGG+TGG 0.616516 4.3:+70150138 None:intergenic
ACCGGTGGCTTCTCTACAGG+TGG 0.616516 4.3:+70150168 None:intergenic
ACAGGAGGTTTCTCAACTGG+TGG 0.620067 4.3:+70150303 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.621352 4.3:+70149703 None:intergenic
ACCGGTGGCTTGTACACTGG+AGG 0.621797 4.3:+70149823 None:intergenic
ACAGGTGGTTTCTCAACCGG+TGG 0.621921 4.3:+70149808 None:intergenic
TTTACACTCCTCCATTCTAG+AGG 0.626055 4.3:-70149486 None:intergenic
ACAGGAGGTTTCTCAACTGG+GGG 0.626341 4.3:+70150198 None:intergenic
ACCTCCATTCTACCATCCAC+CGG 0.626622 4.3:-70150469 MS.gene88000:CDS
ACGGGAGGTTGCTCTACTGG+TGG 0.627982 4.3:+70150363 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.628173 4.3:+70149763 None:intergenic
ACCACCGGTGTACAAGCCAC+CGG 0.628704 4.3:-70149884 MS.gene88000:CDS
ACCGGTGGCTTATAGACGGG+AGG 0.629346 4.3:+70150348 None:intergenic
ACAGGTGGCTCGTAGATGGG+GGG 0.629370 4.3:+70149613 None:intergenic
ACAGGTGGTTTGTAAACAGG+TGG 0.631583 4.3:+70149913 None:intergenic
ACAGGAGGTTTCTCAACCGG+TGG 0.631666 4.3:+70150243 None:intergenic
ACAGGTGGTTTGTAAACTGG+AGG 0.632113 4.3:+70149853 None:intergenic
TAGAATGGAGGTTTCTCGAA+CGG 0.632815 4.3:+70150480 None:intergenic
ACCACCTGTATACAAGCCGC+CGG 0.635832 4.3:-70149974 MS.gene88000:CDS
ACTGGAGGTTTCAAAACTGG+TGG 0.639972 4.3:+70150108 None:intergenic
ACGGGTGGTTTCTCTACTGG+CGG 0.641147 4.3:+70150513 None:intergenic
ACAGGTGGTTCCTCTACGGG+TGG 0.641581 4.3:+70150693 None:intergenic
ACAGGTGGCTTGTAGACAGG+AGG 0.643242 4.3:+70150183 None:intergenic
ACAGGTGGAATCTCAAATGG+TGG 0.644163 4.3:+70149718 None:intergenic
AATGGTGGCTTGTACACAGG+TGG 0.644801 4.3:+70149643 None:intergenic
ACTGGAGGCTTCTCAACCGG+TGG 0.644887 4.3:+70149868 None:intergenic
AATGGTGGTTTGTACACAGG+TGG 0.645791 4.3:+70150678 None:intergenic
TACGGGTGGTTTATAAACTG+GGG 0.648391 4.3:+70150707 None:intergenic
GTAGGAGGTTTCTCTACAGG+TGG 0.648843 4.3:+70149598 None:intergenic
ATTGGTGGATGGTAGACCGG+AGG 0.649213 4.3:+70150648 None:intergenic
ACAGGTGGCTTCTCAACTGG+TGG 0.649432 4.3:+70149928 None:intergenic
ACCGGCGGCTTGTATACAGG+TGG 0.649588 4.3:+70149973 None:intergenic
AATGGTGGTATCTCTACCGG+TGG 0.651871 4.3:+70150453 None:intergenic
ACCGGTGGATGGTAGAATGG+AGG 0.651873 4.3:+70150468 None:intergenic
ACTGGTGGCTTGTAAACAGG+AGG 0.654690 4.3:+70150288 None:intergenic
TATGGAGGTTTGTAAACAGG+AGG 0.655898 4.3:+70149523 None:intergenic
ACAGGTGGCTTGTAAACCGG+AGG 0.659345 4.3:+70150558 None:intergenic
TAAGGTGGCCTCTAGAATGG+AGG 0.662226 4.3:+70149478 None:intergenic
ACTGGTGGCTTGTACACCGG+TGG 0.662671 4.3:+70150123 None:intergenic
ACAGGTGGCTTGTACACCGG+TGG 0.664873 4.3:+70150153 None:intergenic
ACCACCAGTAGAGAAACCTC+CGG 0.664962 4.3:-70150574 MS.gene88000:CDS
AATGGTGGATTGTCAGTCGG+AGG 0.669565 4.3:+70149568 None:intergenic
ACGGGTGGTTTATAAACTGG+GGG 0.673772 4.3:+70150708 None:intergenic
ACAGGAGGCTCCTCAACTGG+AGG 0.674607 4.3:+70149538 None:intergenic
AATGGAGGAGTGTAAATCGG+TGG 0.681676 4.3:+70149493 None:intergenic
ACTGGTGGGTTACACAATGG+TGG 0.682821 4.3:+70150438 None:intergenic
ACCACCTGTAGAGAAACCAC+CGG 0.690613 4.3:-70149899 MS.gene88000:CDS
GCCACCTGTAGAGAAGCCAC+CGG 0.690613 4.3:-70150139 MS.gene88000:CDS
GCCACCTGTAGAGAAGCCAC+CGG 0.690613 4.3:-70150169 MS.gene88000:CDS
ACGGGTGGCTGGTAAACAGG+AGG 0.698135 4.3:+70150228 None:intergenic
ACAGGTGGAAACTCTACTGG+CGG 0.705018 4.3:+70149658 None:intergenic
TCAACTGGTGGGTTACACAA+TGG 0.739388 4.3:+70150435 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
TAAATTGGAGGTTTCTCAAA+TGG + chr4.3:70150563-70150582 None:intergenic 30.0%
TCAACTGGAGGTTTATAAAA+TGG + chr4.3:70150758-70150777 None:intergenic 30.0%
! ATTTTATAAACCTCCAGTTG+AGG - chr4.3:70150757-70150776 MS.gene88000:CDS 30.0%
! TAAATTGGAGGATTTTCTAC+AGG + chr4.3:70149768-70149787 None:intergenic 30.0%
! TCAAATGGTGGTTTGTAAAT+TGG + chr4.3:70150578-70150597 None:intergenic 30.0%
ACTGGAGGTTTATAAAATGG+TGG + chr4.3:70150755-70150774 None:intergenic 35.0%
TAAACAGGTGGAATCTCAAA+TGG + chr4.3:70150593-70150612 None:intergenic 35.0%
TTCAGGAGGTTTATCATAGT+TGG + chr4.3:70149556-70149575 None:intergenic 35.0%
! AATGGTGGTTTGTAAATTGG+AGG + chr4.3:70150575-70150594 None:intergenic 35.0%
! CTATTGGTGGCTTATAAACT+GGG + chr4.3:70150247-70150266 None:intergenic 35.0%
! TAGAATGGAGGAGTGTAAAT+CGG + chr4.3:70150818-70150837 None:intergenic 35.0%
! TATTGGTGGCTTATAAACTG+GGG + chr4.3:70150246-70150265 None:intergenic 35.0%
! TCTACTGGTGGTTTGTATAT+AGG + chr4.3:70149933-70149952 None:intergenic 35.0%
! TCTATTGGTGGCTTATAAAC+TGG + chr4.3:70150248-70150267 None:intergenic 35.0%
!! TAAAATGGTGGATTGTCAGT+CGG + chr4.3:70150743-70150762 None:intergenic 35.0%
!! TAAACAGGTGGATTTTCTAC+AGG + chr4.3:70150533-70150552 None:intergenic 35.0%
!! TCAACTGGTGGATTATATTC+AGG + chr4.3:70149573-70149592 None:intergenic 35.0%
AGTTTATAAACCACCCGTAG+AGG - chr4.3:70149602-70149621 MS.gene88000:CDS 40.0%
ATTGGAGGTTTCTCAAATGG+TGG + chr4.3:70150560-70150579 None:intergenic 40.0%
CTACGGGTGGTTTATAAACT+GGG + chr4.3:70149602-70149621 None:intergenic 40.0%
GGATGACAAAGAGAGCAAAA+AGG + chr4.3:70149521-70149540 None:intergenic 40.0%
TAAACAGGAGGTTTCTCAAC+CGG + chr4.3:70150008-70150027 None:intergenic 40.0%
TAAACAGGAGGTTTCTCAAC+TGG + chr4.3:70150008-70150027 None:intergenic 40.0%
TAAATAGGAGGTTTCTCGAC+TGG + chr4.3:70150038-70150057 None:intergenic 40.0%
TAAATTGGAGGCTTCTCTAC+CGG + chr4.3:70149978-70149997 None:intergenic 40.0%
TAAATTGGGGGATGTTCAAC+TGG + chr4.3:70149888-70149907 None:intergenic 40.0%
TACACAGGTGGTTTCTCTAT+TGG + chr4.3:70150263-70150282 None:intergenic 40.0%
TACACTGGAGGTTTCAAAAC+TGG + chr4.3:70150203-70150222 None:intergenic 40.0%
TACGGGTGGTTTATAAACTG+GGG + chr4.3:70149601-70149620 None:intergenic 40.0%
TAGAATGGAGGTTTCTCGAA+CGG + chr4.3:70149828-70149847 None:intergenic 40.0%
TATACAGGTGGTTTCTCTAC+TGG + chr4.3:70150323-70150342 None:intergenic 40.0%
TATATAGGTGGCTTCTCTAC+TGG + chr4.3:70149918-70149937 None:intergenic 40.0%
TATGGAGGTTTGTAAACAGG+AGG + chr4.3:70150785-70150804 None:intergenic 40.0%
TCGTATGGAGGTTTGTAAAC+AGG + chr4.3:70150788-70150807 None:intergenic 40.0%
TCTACGGGTGGTTTATAAAC+TGG + chr4.3:70149603-70149622 None:intergenic 40.0%
TCTACTGGCGGTTTGTAAAT+TGG + chr4.3:70150638-70150657 None:intergenic 40.0%
! AACTGGTGGCTTGTAAATTG+GGG + chr4.3:70149991-70150010 None:intergenic 40.0%
! ACTGGTGGTTTGTATATAGG+TGG + chr4.3:70149930-70149949 None:intergenic 40.0%
! ATTGGAGGATTTTCTACAGG+TGG + chr4.3:70149765-70149784 None:intergenic 40.0%
! ATTGGTGGCTTATAAACTGG+GGG + chr4.3:70150245-70150264 None:intergenic 40.0%
! CAACTGGTGGCTTGTAAATT+GGG + chr4.3:70149992-70150011 None:intergenic 40.0%
! CTACTGGTGGCTTGTAAATT+GGG + chr4.3:70149692-70149711 None:intergenic 40.0%
! TAAATTGGGGGCTTTTCGAT+TGG + chr4.3:70149678-70149697 None:intergenic 40.0%
! TACTGGTGGCTTGTAAATTG+GGG + chr4.3:70149691-70149710 None:intergenic 40.0%
! TCAAATGGTGGCTTGTAAAC+AGG + chr4.3:70150548-70150567 None:intergenic 40.0%
! TCAAATGGTGGTTTGTACAC+AGG + chr4.3:70149633-70149652 None:intergenic 40.0%
! TCAACTGGTGGCTTGTAAAT+TGG + chr4.3:70149993-70150012 None:intergenic 40.0%
! TCTACAGGTGGTTTGTAAAC+AGG + chr4.3:70150398-70150417 None:intergenic 40.0%
! TCTACAGGTGGTTTGTAAAC+TGG + chr4.3:70150398-70150417 None:intergenic 40.0%
! TCTACTGGTGGCTTGTAAAT+TGG + chr4.3:70149693-70149712 None:intergenic 40.0%
!! ACTGGTGGATTATATTCAGG+AGG + chr4.3:70149570-70149589 None:intergenic 40.0%
ACAGGTGGAATCTCAAATGG+TGG + chr4.3:70150590-70150609 None:intergenic 45.0%
ACAGGTGGTTTCTCTATTGG+TGG + chr4.3:70150260-70150279 None:intergenic 45.0%
ACCACCATTTGAGAAACCTC+CGG - chr4.3:70149641-70149660 MS.gene88000:CDS 45.0%
ACCTCCTATTTACAAGCCAC+CGG - chr4.3:70150046-70150065 MS.gene88000:CDS 45.0%
ACGGGTGGTTTATAAACTGG+GGG + chr4.3:70149600-70149619 None:intergenic 45.0%
ACTGGAGGTTTCAAAACTGG+TGG + chr4.3:70150200-70150219 None:intergenic 45.0%
ACTGGCGGTTTGTAAATTGG+AGG + chr4.3:70150635-70150654 None:intergenic 45.0%
AGACAGGAGGTTTCTCAACT+GGG + chr4.3:70150112-70150131 None:intergenic 45.0%
CACAATGGTGGTATCTCTAC+CGG + chr4.3:70149858-70149877 None:intergenic 45.0%
CTCGAACGGTGGTTTATACA+CGG + chr4.3:70149814-70149833 None:intergenic 45.0%
CTCTCTTTGTCATCCCTAAG+GGG - chr4.3:70149526-70149545 MS.gene88000:CDS 45.0%
GCTCTCTTTGTCATCCCTAA+GGG - chr4.3:70149525-70149544 MS.gene88000:CDS 45.0%
TAAACAGGTGGCTTCTCAAC+TGG + chr4.3:70150383-70150402 None:intergenic 45.0%
TAAACCGGAGGTTTCTCTAC+TGG + chr4.3:70149738-70149757 None:intergenic 45.0%
TAAACTGGAGGCTTCTCAAC+CGG + chr4.3:70150443-70150462 None:intergenic 45.0%
TAAACTGGGGGTTTCTCAAC+TGG + chr4.3:70150233-70150252 None:intergenic 45.0%
TAAATCGGTGGCTTCTCGTA+TGG + chr4.3:70150803-70150822 None:intergenic 45.0%
TAAATTGGGGGCTTCTCAAC+CGG + chr4.3:70150353-70150372 None:intergenic 45.0%
TACACAGGTGGAAACTCTAC+TGG + chr4.3:70150653-70150672 None:intergenic 45.0%
TACACAGGTGGTTTCTCAAC+CGG + chr4.3:70150503-70150522 None:intergenic 45.0%
TACGTAGGAGGTTTCTCTAC+AGG + chr4.3:70150713-70150732 None:intergenic 45.0%
TAGACAGGAGGTTTCTCAAC+TGG + chr4.3:70150113-70150132 None:intergenic 45.0%
TAGACCGGAGGTTTCTCAAA+TGG + chr4.3:70149648-70149667 None:intergenic 45.0%
TAGATGGGGGGTTTCTCAAA+TGG + chr4.3:70150683-70150702 None:intergenic 45.0%
TCGAACGGTGGTTTATACAC+GGG + chr4.3:70149813-70149832 None:intergenic 45.0%
TCTACTGGCGGCTTGTAAAT+TGG + chr4.3:70149783-70149802 None:intergenic 45.0%
TGCTCTCTTTGTCATCCCTA+AGG - chr4.3:70149524-70149543 MS.gene88000:CDS 45.0%
! AAAACTGGTGGCTTGTACAC+CGG + chr4.3:70150188-70150207 None:intergenic 45.0%
! AATGGAGGAGTGTAAATCGG+TGG + chr4.3:70150815-70150834 None:intergenic 45.0%
! AATGGTGGCTTGTAAACAGG+TGG + chr4.3:70150545-70150564 None:intergenic 45.0%
! AATGGTGGTTTGTACACAGG+TGG + chr4.3:70149630-70149649 None:intergenic 45.0%
! ACAGGTGGTTTGTAAACAGG+TGG + chr4.3:70150395-70150414 None:intergenic 45.0%
! ACAGGTGGTTTGTAAACTGG+AGG + chr4.3:70150455-70150474 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+AGG + chr4.3:70149690-70149709 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+GGG + chr4.3:70149690-70149709 None:intergenic 45.0%
! CTACTGGTGGCTTGTAAACT+GGG + chr4.3:70150307-70150326 None:intergenic 45.0%
! TACTGGTGGCTTGTAAACTG+GGG + chr4.3:70150306-70150325 None:intergenic 45.0%
! TCAAATGGTGGCTTGTACAC+AGG + chr4.3:70150668-70150687 None:intergenic 45.0%
! TCAACCGGTGGCTTGTAAAT+AGG + chr4.3:70150053-70150072 None:intergenic 45.0%
! TCAACTGGTGGTTTGTACAC+TGG + chr4.3:70150218-70150237 None:intergenic 45.0%
! TCTACAGGTGGCTTGTAAAC+CGG + chr4.3:70149753-70149772 None:intergenic 45.0%
! TCTACTGGTGGCTTGTAAAC+TGG + chr4.3:70150308-70150327 None:intergenic 45.0%
! TCTACTGGTGGTTTGTACAC+AGG + chr4.3:70149723-70149742 None:intergenic 45.0%
!! ACAGGTGGATTTTCTACAGG+TGG + chr4.3:70150530-70150549 None:intergenic 45.0%
!! TCAACTGGTGGGTTACACAA+TGG + chr4.3:70149873-70149892 None:intergenic 45.0%
AACGGTGGTTTATACACGGG+TGG + chr4.3:70149810-70149829 None:intergenic 50.0%
AATGGAGGTTTCTCGAACGG+TGG + chr4.3:70149825-70149844 None:intergenic 50.0%
AATGGTGGTATCTCTACCGG+TGG + chr4.3:70149855-70149874 None:intergenic 50.0%
ACAGGAGGTTTCTCAACTGG+GGG + chr4.3:70150005-70150024 None:intergenic 50.0%
ACAGGAGGTTTCTCAACTGG+TGG + chr4.3:70150005-70150024 None:intergenic 50.0%
ACAGGTGGAAACTCTACTGG+CGG + chr4.3:70150650-70150669 None:intergenic 50.0%
ACAGGTGGTTTCTCTACTGG+TGG + chr4.3:70150320-70150339 None:intergenic 50.0%
ACCACCAGTAGAGAAACCTC+CGG - chr4.3:70149731-70149750 MS.gene88000:CDS 50.0%
ACCACCTGTAGAGAAACCAC+CGG - chr4.3:70150406-70150425 MS.gene88000:CDS 50.0%
ACCGGAGGTTTCTCAAATGG+TGG + chr4.3:70149645-70149664 None:intergenic 50.0%
ACCTCCATTCTACCATCCAC+CGG - chr4.3:70149836-70149855 MS.gene88000:CDS 50.0%
ACTGGCGGCTTGTAAATTGG+AGG + chr4.3:70149780-70149799 None:intergenic 50.0%
ATAGGAGGTTTCTCGACTGG+TGG + chr4.3:70150035-70150054 None:intergenic 50.0%
ATAGGTGGCTTCTCTACTGG+TGG + chr4.3:70149915-70149934 None:intergenic 50.0%
ATGGGGGGTTTCTCAAATGG+TGG + chr4.3:70150680-70150699 None:intergenic 50.0%
ATTGGGGGATGTTCAACTGG+TGG + chr4.3:70149885-70149904 None:intergenic 50.0%
CATAGTTGGCAAGCCCCTTA+GGG + chr4.3:70149542-70149561 None:intergenic 50.0%
CTCAACTGGGGGCTTGTAAA+CGG + chr4.3:70150099-70150118 None:intergenic 50.0%
CTCTACCGGTGGCTTATAGA+CGG + chr4.3:70149964-70149983 None:intergenic 50.0%
GACAGGAGGTTTCTCAACTG+GGG + chr4.3:70150111-70150130 None:intergenic 50.0%
GAGCAAAAAGGAGCAGCACT+AGG + chr4.3:70149509-70149528 None:intergenic 50.0%
GAGCAGCACTAGGAAGTTTG+AGG + chr4.3:70149499-70149518 None:intergenic 50.0%
GTACACAGGTGGTTCCTCTA+CGG + chr4.3:70149619-70149638 None:intergenic 50.0%
GTAGGAGGTTTCTCTACAGG+TGG + chr4.3:70150710-70150729 None:intergenic 50.0%
TAAACAGGAGGCTCCTCAAC+TGG + chr4.3:70150773-70150792 None:intergenic 50.0%
TAAACGGGTGGCTGGTAAAC+AGG + chr4.3:70150083-70150102 None:intergenic 50.0%
TAAACTGGGGGATGCTCAAC+TGG + chr4.3:70149588-70149607 None:intergenic 50.0%
TAAACTGGGGGCTTCTCAAC+TGG + chr4.3:70150293-70150312 None:intergenic 50.0%
TACACAGGTGGCTTCTCTAC+TGG + chr4.3:70149708-70149727 None:intergenic 50.0%
TACACAGGTGGTTCCTCTAC+GGG + chr4.3:70149618-70149637 None:intergenic 50.0%
TACACCGGTGGTTTCTCTAC+AGG + chr4.3:70150413-70150432 None:intergenic 50.0%
TACACGGGTGGTTTCTCTAC+TGG + chr4.3:70149798-70149817 None:intergenic 50.0%
TACACTGGAGGCTTCTCTAC+AGG + chr4.3:70150473-70150492 None:intergenic 50.0%
TCAACTGGGGGCTTGTAAAC+GGG + chr4.3:70150098-70150117 None:intergenic 50.0%
TCATAGTTGGCAAGCCCCTT+AGG + chr4.3:70149543-70149562 None:intergenic 50.0%
TCTACAGGTGGCTCGTAGAT+GGG + chr4.3:70150698-70150717 None:intergenic 50.0%
TCTACCGGTGGATGGTAGAA+TGG + chr4.3:70149843-70149862 None:intergenic 50.0%
TCTACCGGTGGCTTATAGAC+GGG + chr4.3:70149963-70149982 None:intergenic 50.0%
TTGGGGGATGTTCAACTGGT+GGG + chr4.3:70149884-70149903 None:intergenic 50.0%
! AATGGTGGCTTGTACACAGG+TGG + chr4.3:70150665-70150684 None:intergenic 50.0%
! ACCGGTGGCTTGTAAATAGG+AGG + chr4.3:70150050-70150069 None:intergenic 50.0%
! ACTGGTGGCTTGTAAACAGG+AGG + chr4.3:70150020-70150039 None:intergenic 50.0%
! ACTGGTGGCTTGTAAACTGG+GGG + chr4.3:70150305-70150324 None:intergenic 50.0%
! ACTGGTGGTTTGTACACAGG+TGG + chr4.3:70149720-70149739 None:intergenic 50.0%
! ACTGGTGGTTTGTACACTGG+AGG + chr4.3:70150215-70150234 None:intergenic 50.0%
! ATTGGGGGCTTTTCGATTGG+TGG + chr4.3:70149675-70149694 None:intergenic 50.0%
! TCAACTGGTGGCTTGTACAC+AGG + chr4.3:70150278-70150297 None:intergenic 50.0%
! TCGACTGGTGGCTTGTAAAC+AGG + chr4.3:70150023-70150042 None:intergenic 50.0%
! TCGATTGGTGGATGGTAGAC+CGG + chr4.3:70149663-70149682 None:intergenic 50.0%
! TCTACAGGTGGCTTGTACAC+AGG + chr4.3:70150158-70150177 None:intergenic 50.0%
! TCTACAGGTGGCTTGTACAC+CGG + chr4.3:70150158-70150177 None:intergenic 50.0%
! TCTACAGGTGGCTTGTAGAC+AGG + chr4.3:70150128-70150147 None:intergenic 50.0%
!! AATGGTGGATTGTCAGTCGG+AGG + chr4.3:70150740-70150759 None:intergenic 50.0%
!! ACTGGTGGGTTACACAATGG+TGG + chr4.3:70149870-70149889 None:intergenic 50.0%
ACAGGAGGTTTCTCAACCGG+TGG + chr4.3:70150065-70150084 None:intergenic 55.0%
ACAGGTGGCTTCTCAACTGG+TGG + chr4.3:70150380-70150399 None:intergenic 55.0%
ACAGGTGGCTTCTCTACTGG+TGG + chr4.3:70149705-70149724 None:intergenic 55.0%
ACAGGTGGTTTCTCAACCGG+TGG + chr4.3:70150500-70150519 None:intergenic 55.0%
ACCACCTGTATACAAGCCGC+CGG - chr4.3:70150331-70150350 MS.gene88000:CDS 55.0%
ACCGGAGGTTTCTCTACTGG+TGG + chr4.3:70149735-70149754 None:intergenic 55.0%
ACCGGTGGATGGTAGAATGG+AGG + chr4.3:70149840-70149859 None:intergenic 55.0%
ACCGGTGGTTTCTCTACAGG+TGG + chr4.3:70150410-70150429 None:intergenic 55.0%
ACCTCCCGTCTATAAGCCAC+CGG - chr4.3:70149956-70149975 MS.gene88000:CDS 55.0%
ACGGGTGGTTTCTCTACTGG+CGG + chr4.3:70149795-70149814 None:intergenic 55.0%
ACTGGAGGCTTCTCTACAGG+TGG + chr4.3:70150470-70150489 None:intergenic 55.0%
ACTGGGGGTTTCTCAACTGG+TGG + chr4.3:70150230-70150249 None:intergenic 55.0%
ATCGGTGGCTTCTCGTATGG+AGG + chr4.3:70150800-70150819 None:intergenic 55.0%
ATTGGAGGCTTCTCTACCGG+TGG + chr4.3:70149975-70149994 None:intergenic 55.0%
CTACAGGTGGCTCGTAGATG+GGG + chr4.3:70150697-70150716 None:intergenic 55.0%
CTCTACAGGTGGCTCGTAGA+TGG + chr4.3:70150699-70150718 None:intergenic 55.0%
GTGGTATCTCTACCGGTGGA+TGG + chr4.3:70149851-70149870 None:intergenic 55.0%
TACACCGGTGGCTTCTCTAC+AGG + chr4.3:70150143-70150162 None:intergenic 55.0%
TACAGGTGGCTCGTAGATGG+GGG + chr4.3:70150696-70150715 None:intergenic 55.0%
TAGACGGGAGGTTGCTCTAC+TGG + chr4.3:70149948-70149967 None:intergenic 55.0%
TCAACCGGCGGCTTGTATAC+AGG + chr4.3:70150338-70150357 None:intergenic 55.0%
TCAGTCGGAGGCTTGTACGT+AGG + chr4.3:70150728-70150747 None:intergenic 55.0%
! ACAGGTGGCTTGTAAACCGG+AGG + chr4.3:70149750-70149769 None:intergenic 55.0%
! ACAGGTGGCTTGTACACAGG+TGG + chr4.3:70150515-70150534 None:intergenic 55.0%
! ACAGGTGGCTTGTAGACAGG+AGG + chr4.3:70150125-70150144 None:intergenic 55.0%
! ACTGGTGGCTTGTACACAGG+TGG + chr4.3:70150275-70150294 None:intergenic 55.0%
! ATTGGTGGATGGTAGACCGG+AGG + chr4.3:70149660-70149679 None:intergenic 55.0%
! GGGGCTTTTCGATTGGTGGA+TGG + chr4.3:70149671-70149690 None:intergenic 55.0%
! TCAACCGGTGGCTTGTACAC+CGG + chr4.3:70150428-70150447 None:intergenic 55.0%
! TCAACCGGTGGCTTGTACAC+TGG + chr4.3:70150428-70150447 None:intergenic 55.0%
ACAGGAGGCTCCTCAACTGG+AGG + chr4.3:70150770-70150789 None:intergenic 60.0%
ACAGGTGGCTCGTAGATGGG+GGG + chr4.3:70150695-70150714 None:intergenic 60.0%
ACAGGTGGTTCCTCTACGGG+TGG + chr4.3:70149615-70149634 None:intergenic 60.0%
ACCACCGGTGTACAAGCCAC+CGG - chr4.3:70150421-70150440 MS.gene88000:CDS 60.0%
ACCGGCGGCTTGTATACAGG+TGG + chr4.3:70150335-70150354 None:intergenic 60.0%
ACCGGTGGCTTATAGACGGG+AGG + chr4.3:70149960-70149979 None:intergenic 60.0%
ACCGGTGGCTTCTCTACAGG+TGG + chr4.3:70150140-70150159 None:intergenic 60.0%
ACGGGAGGTTGCTCTACTGG+TGG + chr4.3:70149945-70149964 None:intergenic 60.0%
ACGGGTGGCTGGTAAACAGG+AGG + chr4.3:70150080-70150099 None:intergenic 60.0%
ACTGGAGGCTTCTCAACCGG+TGG + chr4.3:70150440-70150459 None:intergenic 60.0%
ACTGGGGGATGCTCAACTGG+TGG + chr4.3:70149585-70149604 None:intergenic 60.0%
ACTGGGGGCTTCTCAACTGG+TGG + chr4.3:70150290-70150309 None:intergenic 60.0%
ACTGGGGGCTTGTAAACGGG+TGG + chr4.3:70150095-70150114 None:intergenic 60.0%
ATTGGGGGCTTCTCAACCGG+CGG + chr4.3:70150350-70150369 None:intergenic 60.0%
GCCACCTGTAGAGAAGCCAC+CGG - chr4.3:70150136-70150155 MS.gene88000:CDS 60.0%
GCCTCCAGTGTACAAGCCAC+CGG - chr4.3:70150481-70150500 MS.gene88000:CDS 60.0%
GTCGGAGGCTTGTACGTAGG+AGG + chr4.3:70150725-70150744 None:intergenic 60.0%
! ACAGGTGGCTTGTACACCGG+TGG + chr4.3:70150155-70150174 None:intergenic 60.0%
! ACCGGTGGCTTGTACACTGG+AGG + chr4.3:70150485-70150504 None:intergenic 60.0%
! ACTGGTGGCTTGTACACCGG+TGG + chr4.3:70150185-70150204 None:intergenic 60.0%
GGGGCTTGTAAACGGGTGGC+TGG + chr4.3:70150091-70150110 None:intergenic 65.0%
! ACCGGTGGCTTGTACACCGG+TGG + chr4.3:70150425-70150444 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 70149489 70150838 70149489 ID=MS.gene88000
chr4.3 mRNA 70149489 70150838 70149489 ID=MS.gene88000.t1;Parent=MS.gene88000
chr4.3 exon 70149489 70150838 70149489 ID=MS.gene88000.t1.exon1;Parent=MS.gene88000.t1
chr4.3 CDS 70149489 70150838 70149489 ID=cds.MS.gene88000.t1;Parent=MS.gene88000.t1
Gene Sequence

>MS.gene88000

ATGGCTTCCTCAAACTTCCTAGTGCTGCTCCTTTTTGCTCTCTTTGTCATCCCTAAGGGGCTTGCCAACTATGATAAACCTCCTGAATATAATCCACCAGTTGAGCATCCCCCAGTTTATAAACCACCCGTAGAGGAACCACCTGTGTACAAACCACCATTTGAGAAACCTCCGGTCTACCATCCACCAATCGAAAAGCCCCCAATTTACAAGCCACCAGTAGAGAAGCCACCTGTGTACAAACCACCAGTAGAGAAACCTCCGGTTTACAAGCCACCTGTAGAAAATCCTCCAATTTACAAGCCGCCAGTAGAGAAACCACCCGTGTATAAACCACCGTTCGAGAAACCTCCATTCTACCATCCACCGGTAGAGATACCACCATTGTGTAACCCACCAGTTGAACATCCCCCAATTTACAAGCCACCAGTAGAGAAGCCACCTATATACAAACCACCAGTAGAGCAACCTCCCGTCTATAAGCCACCGGTAGAGAAGCCTCCAATTTACAAGCCACCAGTTGAGAAACCTCCTGTTTACAAGCCACCAGTCGAGAAACCTCCTATTTACAAGCCACCGGTTGAGAAACCTCCTGTTTACCAGCCACCCGTTTACAAGCCCCCAGTTGAGAAACCTCCTGTCTACAAGCCACCTGTAGAGAAGCCACCGGTGTACAAGCCACCTGTAGAGAAGCCACCGGTGTACAAGCCACCAGTTTTGAAACCTCCAGTGTACAAACCACCAGTTGAGAAACCCCCAGTTTATAAGCCACCAATAGAGAAACCACCTGTGTACAAGCCACCAGTTGAGAAGCCCCCAGTTTACAAGCCACCAGTAGAGAAACCACCTGTATACAAGCCGCCGGTTGAGAAGCCCCCAATTTACAAGCCACCAGTTGAGAAGCCACCTGTTTACAAACCACCTGTAGAGAAACCACCGGTGTACAAGCCACCGGTTGAGAAGCCTCCAGTTTACAAACCACCTGTAGAGAAGCCTCCAGTGTACAAGCCACCGGTTGAGAAACCACCTGTGTACAAGCCACCTGTAGAAAATCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCACCATTTGAGATTCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCGCCAGTAGAGTTTCCACCTGTGTACAAGCCACCATTTGAGAAACCCCCCATCTACGAGCCACCTGTAGAGAAACCTCCTACGTACAAGCCTCCGACTGACAATCCACCATTTTATAAACCTCCAGTTGAGGAGCCTCCTGTTTACAAACCTCCATACGAGAAGCCACCGATTTACACTCCTCCATTCTAG
Protein sequence

>MS.gene88000.t1

MASSNFLVLLLFALFVIPKGLANYDKPPEYNPPVEHPPVYKPPVEEPPVYKPPFEKPPVYHPPIEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVENPPIYKPPVEKPPVYKPPFEKPPFYHPPVEIPPLCNPPVEHPPIYKPPVEKPPIYKPPVEQPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYQPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVLKPPVYKPPVEKPPVYKPPIEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVENPPVYKPPFEKPPIYKPPFEIPPVYKPPFEKPPIYKPPVEFPPVYKPPFEKPPIYEPPVEKPPTYKPPTDNPPFYKPPVEEPPVYKPPYEKPPIYTPPF