Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88176.t1 | XP_024636346.1 | 92.1 | 649 | 47 | 3 | 1 | 645 | 1 | 649 | 0.00E+00 | 1169.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88176.t1 | F4JJT9 | 68.6 | 605 | 182 | 4 | 44 | 641 | 61 | 664 | 1.8e-241 | 836.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88176.t1 | G7JHA2 | 91.8 | 649 | 48 | 4 | 1 | 645 | 1 | 648 | 0.0e+00 | 1161.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88176 | MS.gene72164 | PPI |
| MS.gene88176 | MS.gene011533 | PPI |
| MS.gene88176 | MS.gene030419 | PPI |
| MS.gene88176 | MS.gene050373 | PPI |
| MS.gene88176 | MS.gene47111 | PPI |
| MS.gene88176 | MS.gene55470 | PPI |
| MS.gene88176 | MS.gene070324 | PPI |
| MS.gene88176 | MS.gene074123 | PPI |
| MS.gene88176 | MS.gene62901 | PPI |
| MS.gene88176 | MS.gene048788 | PPI |
| MS.gene88176 | MS.gene71948 | PPI |
| MS.gene88176 | MS.gene015567 | PPI |
| MS.gene072797 | MS.gene88176 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88176.t1 | MTR_4g052070 | 91.834 | 649 | 48 | 4 | 1 | 645 | 1 | 648 | 0.0 | 1218 |
| MS.gene88176.t1 | MTR_4g120810 | 77.861 | 664 | 122 | 6 | 1 | 640 | 1 | 663 | 0.0 | 1047 |
| MS.gene88176.t1 | MTR_8g104740 | 77.027 | 666 | 126 | 6 | 1 | 640 | 1 | 665 | 0.0 | 1037 |
| MS.gene88176.t1 | MTR_1g113700 | 80.565 | 602 | 99 | 4 | 48 | 640 | 17 | 609 | 0.0 | 981 |
| MS.gene88176.t1 | MTR_4g120810 | 75.465 | 591 | 120 | 6 | 1 | 567 | 1 | 590 | 0.0 | 900 |
| MS.gene88176.t1 | MTR_8g104740 | 74.705 | 593 | 123 | 6 | 1 | 567 | 1 | 592 | 0.0 | 892 |
| MS.gene88176.t1 | MTR_8g104740 | 87.417 | 453 | 47 | 2 | 198 | 640 | 1 | 453 | 0.0 | 820 |
| MS.gene88176.t1 | MTR_8g104740 | 84.345 | 313 | 39 | 2 | 265 | 567 | 1 | 313 | 0.0 | 542 |
| MS.gene88176.t1 | MTR_8g007295 | 27.103 | 321 | 205 | 11 | 7 | 326 | 61 | 353 | 3.64e-17 | 85.1 |
| MS.gene88176.t1 | MTR_8g007295 | 27.103 | 321 | 205 | 11 | 7 | 326 | 61 | 353 | 6.04e-17 | 85.1 |
| MS.gene88176.t1 | MTR_4g127770 | 22.257 | 319 | 212 | 9 | 30 | 324 | 564 | 870 | 1.25e-11 | 68.6 |
| MS.gene88176.t1 | MTR_4g127770 | 26.351 | 148 | 101 | 3 | 181 | 324 | 240 | 383 | 2.11e-11 | 67.8 |
| MS.gene88176.t1 | MTR_1g014140 | 25.161 | 310 | 195 | 11 | 8 | 301 | 45 | 333 | 5.49e-11 | 65.9 |
| MS.gene88176.t1 | MTR_4g127790 | 25.517 | 145 | 106 | 2 | 181 | 324 | 38 | 181 | 9.92e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88176.t1 | AT4G33760 | 68.960 | 596 | 178 | 3 | 52 | 641 | 70 | 664 | 0.0 | 870 |
| MS.gene88176.t1 | AT4G33760 | 69.754 | 529 | 153 | 3 | 119 | 641 | 1 | 528 | 0.0 | 782 |
| MS.gene88176.t1 | AT3G13490 | 25.172 | 290 | 197 | 9 | 39 | 326 | 104 | 375 | 5.66e-14 | 75.5 |
Find 141 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAATTGATTGCTTCTT+TGG | 0.089571 | 4.4:-50467213 | None:intergenic |
| ATTGATTGCTTCTTTGGTTT+TGG | 0.170081 | 4.4:-50467207 | None:intergenic |
| GCATCGTCAGAATTCAATTT+AGG | 0.234372 | 4.4:-50467611 | None:intergenic |
| AGGGATTGGTTGAGGGGTTT+AGG | 0.249411 | 4.4:-50467239 | None:intergenic |
| CAAAGGGTTTACTTACTCTT+TGG | 0.262069 | 4.4:+50469819 | MS.gene88176:CDS |
| TTTGTAAGGGAGATGTATTT+TGG | 0.264140 | 4.4:-50467174 | None:intergenic |
| ACATCAAAGATAATGCTTTA+AGG | 0.280841 | 4.4:-50467121 | None:intergenic |
| GCAAGGTTGTTCATGTCTTC+AGG | 0.297939 | 4.4:-50470433 | None:intergenic |
| TTCTGCTTTAGTTTCAAGTA+TGG | 0.300568 | 4.4:+50469955 | MS.gene88176:CDS |
| CTGCCATTCAAGGTGTTGTT+AGG | 0.302813 | 4.4:+50467480 | MS.gene88176:CDS |
| AATACAGGAGGCATAGCTTT+TGG | 0.315643 | 4.4:+50471042 | MS.gene88176:intron |
| AGACCACACCGGCATTATTC+AGG | 0.315831 | 4.4:+50467388 | MS.gene88176:CDS |
| TCTAGATCAAATCTGGTATC+TGG | 0.318832 | 4.4:-50469401 | None:intergenic |
| TGAGTTCACACAACTGGATA+TGG | 0.319067 | 4.4:+50468883 | MS.gene88176:CDS |
| TTGTTCATGTCTTCAGGATT+TGG | 0.324171 | 4.4:-50470427 | None:intergenic |
| GGTATCGATGTCTTGATCTA+AGG | 0.337704 | 4.4:+50468168 | MS.gene88176:intron |
| TTTCAGGCTGAAGCGAAGTA+TGG | 0.346207 | 4.4:+50470796 | MS.gene88176:intron |
| AATCCACAAAATTGAATGTT+TGG | 0.356901 | 4.4:-50470224 | None:intergenic |
| GATGAGTCCTTGAAATCCTT+TGG | 0.361551 | 4.4:-50467262 | None:intergenic |
| TTGAAATCCTTTGGAGGGAT+TGG | 0.366921 | 4.4:-50467253 | None:intergenic |
| AAATATTCCCGGGAACCTTC+TGG | 0.369193 | 4.4:-50468419 | None:intergenic |
| AACCGTTCGTCTTTGTGGTT+GGG | 0.381105 | 4.4:+50467319 | MS.gene88176:CDS |
| GGTAAAACCGTTCGTCTTTG+TGG | 0.386146 | 4.4:+50467314 | MS.gene88176:CDS |
| AGGTTCAAGAGTTGAATTCT+AGG | 0.386972 | 4.4:+50467567 | MS.gene88176:CDS |
| TTAAATATCTGAGGGCTTTG+TGG | 0.390683 | 4.4:-50468592 | None:intergenic |
| CTCAAACGGATTTCCTCATT+AGG | 0.395608 | 4.4:-50467644 | None:intergenic |
| TCCTTTGGAGGGATTGGTTG+AGG | 0.396684 | 4.4:-50467247 | None:intergenic |
| TAGCTGGTGCTAACTCAATC+AGG | 0.398116 | 4.4:+50471088 | MS.gene88176:CDS |
| TGAAAGATCTCTCAGCTGTT+GGG | 0.399562 | 4.4:-50471181 | None:intergenic |
| CTAAATACCTGGATTCTTGA+TGG | 0.405744 | 4.4:-50468446 | None:intergenic |
| GATCCACACCAGAAGGTTCC+CGG | 0.409313 | 4.4:+50468411 | MS.gene88176:CDS |
| GATTCATTCCACTTAAACAT+TGG | 0.411464 | 4.4:-50470256 | None:intergenic |
| CCGACTTTCCAATGTTTAAG+TGG | 0.418645 | 4.4:+50470248 | MS.gene88176:CDS |
| TGCTTCAGCATATGTAAGCC+TGG | 0.420918 | 4.4:-50469354 | None:intergenic |
| GATATTTAAGCAAATGCTAA+TGG | 0.421115 | 4.4:+50468606 | MS.gene88176:CDS |
| GCTGAAGCAATGAATAGATA+TGG | 0.425444 | 4.4:+50469368 | MS.gene88176:CDS |
| TTGATGGAACTAAATATTCC+CGG | 0.426697 | 4.4:-50468430 | None:intergenic |
| TAAACGCGACATACAACAAA+AGG | 0.428071 | 4.4:+50470624 | MS.gene88176:CDS |
| CTTTGGAGGGATTGGTTGAG+GGG | 0.428427 | 4.4:-50467245 | None:intergenic |
| CATTGAGGTTGCTGCAAATG+AGG | 0.431007 | 4.4:+50467547 | MS.gene88176:CDS |
| CCTTTGGAGGGATTGGTTGA+GGG | 0.435209 | 4.4:-50467246 | None:intergenic |
| CCTTGCATCGGCTCGTGCAT+TGG | 0.439535 | 4.4:+50470450 | MS.gene88176:CDS |
| GTAAGCCTGGGGAAAGGGTT+TGG | 0.441264 | 4.4:-50469341 | None:intergenic |
| CACACAACTGGATATGGAAA+TGG | 0.444801 | 4.4:+50468889 | MS.gene88176:CDS |
| AATCCCTCCAAAGGATTTCA+AGG | 0.446071 | 4.4:+50467255 | MS.gene88176:CDS |
| ATACTTTATGTCAGATTGGT+GGG | 0.446432 | 4.4:+50470584 | MS.gene88176:intron |
| AAACCGTTCGTCTTTGTGGT+TGG | 0.447246 | 4.4:+50467318 | MS.gene88176:CDS |
| CTCATATATTGATGTTTACA+AGG | 0.452540 | 4.4:+50469778 | MS.gene88176:CDS |
| ACAACCTGAGTTCACACAAC+TGG | 0.453317 | 4.4:+50468877 | MS.gene88176:CDS |
| AGATATCTAGAAGACATTCA+TGG | 0.454331 | 4.4:+50468248 | MS.gene88176:CDS |
| CATTATCTTTGATGTCCATT+CGG | 0.455183 | 4.4:+50467129 | MS.gene88176:CDS |
| GAGTATGTGGCTGCCATTCA+AGG | 0.455865 | 4.4:+50467470 | MS.gene88176:CDS |
| ACTAAGGCTATTACCTCAAA+CGG | 0.457448 | 4.4:-50467658 | None:intergenic |
| TTGTTAAGGCGATGCTCTGC+GGG | 0.461752 | 4.4:+50469998 | MS.gene88176:CDS |
| AAAGTATTGTGTGTACCTTC+TGG | 0.462564 | 4.4:+50469743 | MS.gene88176:CDS |
| AAGCAAATGCTAATGGTAGC+TGG | 0.467850 | 4.4:+50468613 | MS.gene88176:CDS |
| TTGAAAGATCTCTCAGCTGT+TGG | 0.477814 | 4.4:-50471182 | None:intergenic |
| CATATGTAAGCCTGGGGAAA+GGG | 0.478597 | 4.4:-50469346 | None:intergenic |
| AGACCTAACAACACCTTGAA+TGG | 0.487866 | 4.4:-50467483 | None:intergenic |
| AGGTCATCTTAGAGTTTATG+TGG | 0.489822 | 4.4:+50470078 | MS.gene88176:CDS |
| ATCGACTACGAGATGAAAAC+CGG | 0.493923 | 4.4:+50467521 | MS.gene88176:CDS |
| TGCAGCAACCTCAATGAAGC+CGG | 0.498018 | 4.4:-50467540 | None:intergenic |
| AGCAATGAATAGATATGGTT+CGG | 0.498070 | 4.4:+50469373 | MS.gene88176:CDS |
| AGCATTTGCTTAAATATCTG+AGG | 0.502288 | 4.4:-50468601 | None:intergenic |
| TTCTTGAAGCTCTTGACATG+GGG | 0.505034 | 4.4:+50470824 | MS.gene88176:CDS |
| GGAATCAGAGAAAATCTTGA+AGG | 0.507807 | 4.4:-50469699 | None:intergenic |
| CTAATGAGGAAATCCGTTTG+AGG | 0.507985 | 4.4:+50467645 | MS.gene88176:CDS |
| TATACTTTATGTCAGATTGG+TGG | 0.511613 | 4.4:+50470583 | MS.gene88176:intron |
| TCTGATTCCTTGGAGTGTGG+TGG | 0.511716 | 4.4:+50469713 | MS.gene88176:CDS |
| TTCAAAACAGAATGTGCGAC+TGG | 0.514628 | 4.4:-50467434 | None:intergenic |
| TTCTCTGATTCCTTGGAGTG+TGG | 0.517839 | 4.4:+50469710 | MS.gene88176:CDS |
| TGAGACTCTAGGCATCTCAA+TGG | 0.517904 | 4.4:+50470651 | MS.gene88176:CDS |
| ACTTTATGTCAGATTGGTGG+GGG | 0.518977 | 4.4:+50470586 | MS.gene88176:intron |
| TTTAGTTCCATCAAGAATCC+AGG | 0.519530 | 4.4:+50468439 | MS.gene88176:CDS |
| AAACCTAAAACGCGAGTATG+TGG | 0.521562 | 4.4:+50467457 | MS.gene88176:CDS |
| AAGGGATGGGCTTCGCCGAA+TGG | 0.522273 | 4.4:-50467144 | None:intergenic |
| TCAGGATTTGGTGCAGTGAA+AGG | 0.522281 | 4.4:-50470415 | None:intergenic |
| CAACTAGAGAGGAATTGTTA+AGG | 0.525367 | 4.4:+50469984 | MS.gene88176:CDS |
| TCGTGCATTGGCTTATGACA+TGG | 0.525618 | 4.4:+50470462 | MS.gene88176:CDS |
| GCATCTGTAAATAAAACTCT+AGG | 0.526215 | 4.4:+50470058 | MS.gene88176:CDS |
| AGAGACAACATATCCTCTAA+AGG | 0.530071 | 4.4:-50468920 | None:intergenic |
| TACTTTATGTCAGATTGGTG+GGG | 0.532670 | 4.4:+50470585 | MS.gene88176:intron |
| GCATATGTAAGCCTGGGGAA+AGG | 0.533395 | 4.4:-50469347 | None:intergenic |
| GCTTCAGCATATGTAAGCCT+GGG | 0.534696 | 4.4:-50469353 | None:intergenic |
| AGATTGGTTATGTTGCTAGC+TGG | 0.540261 | 4.4:+50471072 | MS.gene88176:CDS |
| CTTCTTGAAGCTCTTGACAT+GGG | 0.540430 | 4.4:+50470823 | MS.gene88176:CDS |
| TAACGAAGAGTTGATCAGAA+AGG | 0.542839 | 4.4:+50468943 | MS.gene88176:CDS |
| TCTAGGCATCTCAATGGAGC+AGG | 0.544124 | 4.4:+50470657 | MS.gene88176:CDS |
| AGAAATAAAATCAGATCACT+TGG | 0.550451 | 4.4:-50470022 | None:intergenic |
| AATTACCAAACCCTTTCCCC+AGG | 0.550475 | 4.4:+50469336 | MS.gene88176:CDS |
| GAGTCCTTGAAATCCTTTGG+AGG | 0.550853 | 4.4:-50467259 | None:intergenic |
| CCACTTAAACATTGGAAAGT+CGG | 0.551196 | 4.4:-50470248 | None:intergenic |
| GTGGTCTCTAAGAATGAGAA+TGG | 0.554413 | 4.4:-50467372 | None:intergenic |
| TGATGGAACTAAATATTCCC+GGG | 0.556444 | 4.4:-50468429 | None:intergenic |
| ATAAATATTATCAAGTAGCA+AGG | 0.559397 | 4.4:+50468641 | MS.gene88176:CDS |
| ATCCACACCAGAAGGTTCCC+GGG | 0.562064 | 4.4:+50468412 | MS.gene88176:CDS |
| GCATTTGCTTAAATATCTGA+GGG | 0.563732 | 4.4:-50468600 | None:intergenic |
| AGTCCTTGAAATCCTTTGGA+GGG | 0.564025 | 4.4:-50467258 | None:intergenic |
| TGCAGAAGGTTCTCCTAATG+AGG | 0.564632 | 4.4:+50467631 | MS.gene88176:CDS |
| CCAATGCACGAGCCGATGCA+AGG | 0.567886 | 4.4:-50470450 | None:intergenic |
| GATGAAGATTTAAGAGCTGA+AGG | 0.571348 | 4.4:+50468854 | MS.gene88176:CDS |
| TATCTGAGGGCTTTGTGGCA+AGG | 0.571416 | 4.4:-50468587 | None:intergenic |
| ATATCCAGTTGTGTGAACTC+AGG | 0.571872 | 4.4:-50468881 | None:intergenic |
| TGTAATAACCTGAATAATGC+CGG | 0.574422 | 4.4:-50467396 | None:intergenic |
| GAAAGATCTCTCAGCTGTTG+GGG | 0.578786 | 4.4:-50471180 | None:intergenic |
| TTGAATTCTGACGATGCAGA+AGG | 0.579422 | 4.4:+50467617 | MS.gene88176:CDS |
| GTTGAACTTCACAGACGCTA+CGG | 0.581291 | 4.4:+50467341 | MS.gene88176:CDS |
| TTCCCGGGAACCTTCTGGTG+TGG | 0.588579 | 4.4:-50468414 | None:intergenic |
| GATGAAAACCGGCTTCATTG+AGG | 0.589843 | 4.4:+50467532 | MS.gene88176:CDS |
| AATAACTCCACCACACTCCA+AGG | 0.590280 | 4.4:-50469720 | None:intergenic |
| TCTTCTTGAAGCTCTTGACA+TGG | 0.595100 | 4.4:+50470822 | MS.gene88176:CDS |
| CCCTCAACCAATCCCTCCAA+AGG | 0.597723 | 4.4:+50467246 | MS.gene88176:CDS |
| CCTCGGAAGGTGATCTCGTG+AGG | 0.598148 | 4.4:-50471152 | None:intergenic |
| CAGCTGTTGGGGATCCACCT+CGG | 0.598561 | 4.4:-50471169 | None:intergenic |
| CTGTCAAGATCCACACCAGA+AGG | 0.603413 | 4.4:+50468404 | MS.gene88176:CDS |
| TGTTGGGGATCCACCTCGGA+AGG | 0.606271 | 4.4:-50471165 | None:intergenic |
| GGTGTGGATCTTGACAGTAT+CGG | 0.607046 | 4.4:-50468398 | None:intergenic |
| AACCCAACCACAAAGACGAA+CGG | 0.608083 | 4.4:-50467321 | None:intergenic |
| CACGAGATCACCTTCCGAGG+TGG | 0.609144 | 4.4:+50471155 | MS.gene88176:CDS |
| GATCAAATCTGGTATCTGGA+TGG | 0.616984 | 4.4:-50469397 | None:intergenic |
| TCTTGAAGCTCTTGACATGG+GGG | 0.620703 | 4.4:+50470825 | MS.gene88176:CDS |
| TATGGATTCTGCAACTAGAG+AGG | 0.622469 | 4.4:+50469973 | MS.gene88176:CDS |
| CATGTTGCTGCGGCATAATG+TGG | 0.628032 | 4.4:+50468211 | MS.gene88176:CDS |
| TGAATCGAAGCAGAGGCTTG+AGG | 0.628865 | 4.4:+50470273 | MS.gene88176:CDS |
| GAGTACTTCGCTGCACCAGA+AGG | 0.631053 | 4.4:-50469758 | None:intergenic |
| AGACATGAACAACCTTGCAT+CGG | 0.632479 | 4.4:+50470438 | MS.gene88176:CDS |
| GAATTATCTTCCAACGACGT+CGG | 0.639846 | 4.4:+50467293 | MS.gene88176:CDS |
| ATTGTTAAGGCGATGCTCTG+CGG | 0.643730 | 4.4:+50469997 | MS.gene88176:CDS |
| CTCGGAAGGTGATCTCGTGA+GGG | 0.643918 | 4.4:-50471151 | None:intergenic |
| AGCTGGTGCTAACTCAATCA+GGG | 0.644352 | 4.4:+50471089 | MS.gene88176:CDS |
| TTAGAAGACTTACCATGTGG+CGG | 0.647061 | 4.4:-50470850 | None:intergenic |
| AGATCTTTCAATCACTACAC+AGG | 0.653057 | 4.4:+50471194 | MS.gene88176:CDS |
| CCTCACGAGATCACCTTCCG+AGG | 0.653984 | 4.4:+50471152 | MS.gene88176:CDS |
| AGTGGAATGAATCGAAGCAG+AGG | 0.666727 | 4.4:+50470266 | MS.gene88176:CDS |
| CTTTATGTCAGATTGGTGGG+GGG | 0.671478 | 4.4:+50470587 | MS.gene88176:intron |
| TGAATTCTAACATGTTGCTG+CGG | 0.674898 | 4.4:+50468201 | MS.gene88176:CDS |
| TAACCTGAATAATGCCGGTG+TGG | 0.675393 | 4.4:-50467391 | None:intergenic |
| CTTCAGCATATGTAAGCCTG+GGG | 0.689625 | 4.4:-50469352 | None:intergenic |
| GAACTTCACAGACGCTACGG+TGG | 0.691527 | 4.4:+50467344 | MS.gene88176:CDS |
| CTCATTCTTAGAGACCACAC+CGG | 0.705982 | 4.4:+50467377 | MS.gene88176:CDS |
| ATTTCAAGGACTCATCATTG+CGG | 0.709140 | 4.4:+50467269 | MS.gene88176:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTAATAAAATTTAGAA+TGG | + | chr4.4:50469033-50469052 | MS.gene88176:intron | 10.0% |
| !! | TTAAATTTCAAATGAAAATA+TGG | - | chr4.4:50470951-50470970 | None:intergenic | 10.0% |
| !!! | TTTATTAAGAATTACATTTT+TGG | - | chr4.4:50470321-50470340 | None:intergenic | 10.0% |
| !!! | TTTTCATTATTCTTAATTAT+GGG | + | chr4.4:50470371-50470390 | MS.gene88176:intron | 10.0% |
| !! | AAATTACATTAAAAAGATTG+TGG | + | chr4.4:50468809-50468828 | MS.gene88176:intron | 15.0% |
| !! | AACATAAGTGAAATAAATAA+TGG | - | chr4.4:50470176-50470195 | None:intergenic | 15.0% |
| !! | AGGAAAAATATAAATTGAAA+TGG | + | chr4.4:50469165-50469184 | MS.gene88176:intron | 15.0% |
| !! | GGAAAAATATAAATTGAAAT+GGG | + | chr4.4:50469166-50469185 | MS.gene88176:intron | 15.0% |
| !! | TAATACTAAAATCAATCATT+TGG | - | chr4.4:50467978-50467997 | None:intergenic | 15.0% |
| !! | TCTAGTAAATAATTTACAAT+TGG | - | chr4.4:50468110-50468129 | None:intergenic | 15.0% |
| !! | TGTTATTATATATCAAATAC+AGG | + | chr4.4:50471027-50471046 | MS.gene88176:intron | 15.0% |
| !! | TTCTTAATAAATAAGTTATC+TGG | + | chr4.4:50470330-50470349 | MS.gene88176:intron | 15.0% |
| !!! | ATTTTCATTTGAAATTTAAC+CGG | + | chr4.4:50470952-50470971 | MS.gene88176:intron | 15.0% |
| !!! | CAATCTTTTTAATGTAATTT+TGG | - | chr4.4:50468809-50468828 | None:intergenic | 15.0% |
| !!! | CTTTTCATTATTCTTAATTA+TGG | + | chr4.4:50470370-50470389 | MS.gene88176:intron | 15.0% |
| !!! | GTTATTTTTGTTTGAATTTT+AGG | + | chr4.4:50470201-50470220 | MS.gene88176:intron | 15.0% |
| !! | AAAATGAATATGATCATAGA+TGG | - | chr4.4:50468979-50468998 | None:intergenic | 20.0% |
| !! | AAATATAAATTGAAATGGGA+AGG | + | chr4.4:50469170-50469189 | MS.gene88176:intron | 20.0% |
| !! | ACTTTACATTCATAAAACTA+AGG | - | chr4.4:50467677-50467696 | None:intergenic | 20.0% |
| !! | AGTAAATAATTTACAATTGG+AGG | - | chr4.4:50468107-50468126 | None:intergenic | 20.0% |
| !! | ATAAATATTATCAAGTAGCA+AGG | + | chr4.4:50468641-50468660 | MS.gene88176:CDS | 20.0% |
| !! | TATTATACTTTATGTCAGAT+TGG | + | chr4.4:50470580-50470599 | MS.gene88176:intron | 20.0% |
| !! | TATTATATATCAAATACAGG+AGG | + | chr4.4:50471030-50471049 | MS.gene88176:intron | 20.0% |
| !! | TATTTCCAAAATATAAGGAA+TGG | - | chr4.4:50470698-50470717 | None:intergenic | 20.0% |
| !! | TTTAGTATTAATTCCTTGTT+TGG | + | chr4.4:50467988-50468007 | MS.gene88176:intron | 20.0% |
| !!! | AACATAAATGCTTTTTCTAT+GGG | - | chr4.4:50468757-50468776 | None:intergenic | 20.0% |
| !!! | AGTAATAAAATTTAGAATGG+AGG | + | chr4.4:50469036-50469055 | MS.gene88176:intron | 20.0% |
| !!! | ATTCCTTATATTTTGGAAAT+AGG | + | chr4.4:50470697-50470716 | MS.gene88176:intron | 20.0% |
| !!! | ATTTGAGTTTATTTGTATCT+TGG | + | chr4.4:50468692-50468711 | MS.gene88176:intron | 20.0% |
| !!! | GATAAAATTGAGTATTGATA+GGG | - | chr4.4:50469864-50469883 | None:intergenic | 20.0% |
| !!! | TAACATAAATGCTTTTTCTA+TGG | - | chr4.4:50468758-50468777 | None:intergenic | 20.0% |
| !!! | TAGGTTTTTCTTGAAATTAA+GGG | + | chr4.4:50469308-50469327 | MS.gene88176:intron | 20.0% |
| !!! | TCTTTACCTTTTTGTTTATA+AGG | + | chr4.4:50468363-50468382 | MS.gene88176:intron | 20.0% |
| !!! | TGAGATATTAACTTTTTCAT+TGG | + | chr4.4:50469645-50469664 | MS.gene88176:intron | 20.0% |
| !!! | TGATAAAATTGAGTATTGAT+AGG | - | chr4.4:50469865-50469884 | None:intergenic | 20.0% |
| !!! | TGCATTATAATTTCTTTTTC+AGG | + | chr4.4:50470780-50470799 | MS.gene88176:intron | 20.0% |
| !!! | TGCTTACAATTACAAATTTT+AGG | + | chr4.4:50468147-50468166 | MS.gene88176:intron | 20.0% |
| !!! | TTCCTTATATTTTGGAAATA+GGG | + | chr4.4:50470698-50470717 | MS.gene88176:intron | 20.0% |
| !!! | TTTTAATTCTAGATCAAATC+TGG | - | chr4.4:50469411-50469430 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGTTTAATGATG+TGG | + | chr4.4:50468027-50468046 | MS.gene88176:intron | 20.0% |
| ! | AACCTACCTTATAAACAAAA+AGG | - | chr4.4:50468372-50468391 | None:intergenic | 25.0% |
| ! | AAGACATGAAATTATATGAG+AGG | - | chr4.4:50469445-50469464 | None:intergenic | 25.0% |
| ! | AAGGATTACACAATAAACAA+AGG | - | chr4.4:50469913-50469932 | None:intergenic | 25.0% |
| ! | AATCCACAAAATTGAATGTT+TGG | - | chr4.4:50470227-50470246 | None:intergenic | 25.0% |
| ! | ACATCAAAGATAATGCTTTA+AGG | - | chr4.4:50467124-50467143 | None:intergenic | 25.0% |
| ! | AGAAATAAAATCAGATCACT+TGG | - | chr4.4:50470025-50470044 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTTATCGACAA+GGG | - | chr4.4:50470898-50470917 | None:intergenic | 25.0% |
| ! | CTCATATATTGATGTTTACA+AGG | + | chr4.4:50469778-50469797 | MS.gene88176:CDS | 25.0% |
| ! | GATATTTAAGCAAATGCTAA+TGG | + | chr4.4:50468606-50468625 | MS.gene88176:CDS | 25.0% |
| ! | TACCCTATTTCCAAAATATA+AGG | - | chr4.4:50470703-50470722 | None:intergenic | 25.0% |
| ! | TTCTCATTTGATATAGCTTA+CGG | + | chr4.4:50469464-50469483 | MS.gene88176:intron | 25.0% |
| ! | TTTCCAATACTTCAAATTTG+TGG | - | chr4.4:50469004-50469023 | None:intergenic | 25.0% |
| !! | AAATTTAGAATGGAGGAATA+AGG | + | chr4.4:50469043-50469062 | MS.gene88176:intron | 25.0% |
| !! | CATAATTTTACAACCAAACA+AGG | - | chr4.4:50468004-50468023 | None:intergenic | 25.0% |
| !! | GCTAATTTTGCTAATTTTGT+AGG | + | chr4.4:50469289-50469308 | MS.gene88176:intron | 25.0% |
| !! | GTAGGTTTTTCTTGAAATTA+AGG | + | chr4.4:50469307-50469326 | MS.gene88176:intron | 25.0% |
| !! | TATCCACAAATTTGAAGTAT+TGG | + | chr4.4:50468998-50469017 | MS.gene88176:intron | 25.0% |
| !! | TTTGAAATTGATTGCTTCTT+TGG | - | chr4.4:50467216-50467235 | None:intergenic | 25.0% |
| !!! | AATCCTTTGATTTTAGGTAT+TGG | + | chr4.4:50469926-50469945 | MS.gene88176:intron | 25.0% |
| !!! | ATCCTTTGATTTTAGGTATT+GGG | + | chr4.4:50469927-50469946 | MS.gene88176:intron | 25.0% |
| !!! | TAAAGTTACCATTTTTTCAC+TGG | + | chr4.4:50467691-50467710 | MS.gene88176:intron | 25.0% |
| !!! | TACCTTTTTGTTTATAAGGT+AGG | + | chr4.4:50468367-50468386 | MS.gene88176:intron | 25.0% |
| !!! | TTGTGTAATCCTTTGATTTT+AGG | + | chr4.4:50469920-50469939 | MS.gene88176:intron | 25.0% |
| AAACTTGATTTCAAGCTTCA+AGG | - | chr4.4:50467851-50467870 | None:intergenic | 30.0% | |
| AAGGTAAAGATCTAAATACC+TGG | - | chr4.4:50468460-50468479 | None:intergenic | 30.0% | |
| AAGTCTGTAATGTCTATGTA+AGG | + | chr4.4:50467758-50467777 | MS.gene88176:intron | 30.0% | |
| AATTCAAATGATGAACCTAC+TGG | - | chr4.4:50468291-50468310 | None:intergenic | 30.0% | |
| AGATATCTAGAAGACATTCA+TGG | + | chr4.4:50468248-50468267 | MS.gene88176:CDS | 30.0% | |
| AGCAATGAATAGATATGGTT+CGG | + | chr4.4:50469373-50469392 | MS.gene88176:CDS | 30.0% | |
| AGCATTTGCTTAAATATCTG+AGG | - | chr4.4:50468604-50468623 | None:intergenic | 30.0% | |
| ATACTTTATGTCAGATTGGT+GGG | + | chr4.4:50470584-50470603 | MS.gene88176:intron | 30.0% | |
| CAAAATATAAGGAATGGAGT+CGG | - | chr4.4:50470692-50470711 | None:intergenic | 30.0% | |
| CATTATCTTTGATGTCCATT+CGG | + | chr4.4:50467129-50467148 | MS.gene88176:CDS | 30.0% | |
| CGAATCATGCATGTATATTA+TGG | + | chr4.4:50469267-50469286 | MS.gene88176:intron | 30.0% | |
| GACATTACAGACTTTAACAA+AGG | - | chr4.4:50467752-50467771 | None:intergenic | 30.0% | |
| GATAATTCAGTTTATCGACA+AGG | - | chr4.4:50470899-50470918 | None:intergenic | 30.0% | |
| GATTCATTCCACTTAAACAT+TGG | - | chr4.4:50470259-50470278 | None:intergenic | 30.0% | |
| GCATCTGTAAATAAAACTCT+AGG | + | chr4.4:50470058-50470077 | MS.gene88176:CDS | 30.0% | |
| GCATTTGCTTAAATATCTGA+GGG | - | chr4.4:50468603-50468622 | None:intergenic | 30.0% | |
| GTTTATGTGGCACAAAAATT+AGG | + | chr4.4:50470091-50470110 | MS.gene88176:CDS | 30.0% | |
| TACAAGGAAGCAGAAAAATA+TGG | + | chr4.4:50469794-50469813 | MS.gene88176:CDS | 30.0% | |
| TATACTTTATGTCAGATTGG+TGG | + | chr4.4:50470583-50470602 | MS.gene88176:intron | 30.0% | |
| TGCTTAAACATGTTTGATTG+CGG | + | chr4.4:50468060-50468079 | MS.gene88176:intron | 30.0% | |
| TGTAATAACCTGAATAATGC+CGG | - | chr4.4:50467399-50467418 | None:intergenic | 30.0% | |
| TGTTTGATATATATCCTCTG+TGG | + | chr4.4:50469212-50469231 | MS.gene88176:intron | 30.0% | |
| TTGAAGCTTGAAATCAAGTT+TGG | + | chr4.4:50467850-50467869 | MS.gene88176:intron | 30.0% | |
| TTGATGGAACTAAATATTCC+CGG | - | chr4.4:50468433-50468452 | None:intergenic | 30.0% | |
| TTGTATCTTGGCTTATGTTA+TGG | + | chr4.4:50468704-50468723 | MS.gene88176:intron | 30.0% | |
| ! | ACATGGTAAGTCTTCTAAAA+TGG | + | chr4.4:50470855-50470874 | MS.gene88176:intron | 30.0% |
| ! | AGTTTTTATTCGTGTAAACC+AGG | + | chr4.4:50469518-50469537 | MS.gene88176:intron | 30.0% |
| ! | CATGCATGATTCGATTTTTA+TGG | - | chr4.4:50469260-50469279 | None:intergenic | 30.0% |
| ! | GTGCATTTTGTAGATGTTTT+CGG | + | chr4.4:50468831-50468850 | MS.gene88176:intron | 30.0% |
| ! | TGCATTTTGTAGATGTTTTC+GGG | + | chr4.4:50468832-50468851 | MS.gene88176:intron | 30.0% |
| ! | TGCTTTTCATCTTAGCAAAA+AGG | - | chr4.4:50468479-50468498 | None:intergenic | 30.0% |
| ! | TGGGTTTAAGCTTTTTGTAA+GGG | - | chr4.4:50467190-50467209 | None:intergenic | 30.0% |
| ! | TTCTGCTTTAGTTTCAAGTA+TGG | + | chr4.4:50469955-50469974 | MS.gene88176:CDS | 30.0% |
| ! | TTGGGTTTAAGCTTTTTGTA+AGG | - | chr4.4:50467191-50467210 | None:intergenic | 30.0% |
| ! | TTGTAAGGGAGATGTATTTT+GGG | - | chr4.4:50467176-50467195 | None:intergenic | 30.0% |
| ! | TTTGTAAGGGAGATGTATTT+TGG | - | chr4.4:50467177-50467196 | None:intergenic | 30.0% |
| ! | TTTGTAAGGTATCCATATCT+AGG | + | chr4.4:50467792-50467811 | MS.gene88176:intron | 30.0% |
| ! | TTTTCTTGAAATTAAGGGTG+TGG | + | chr4.4:50469313-50469332 | MS.gene88176:CDS | 30.0% |
| !! | ATTGATTGCTTCTTTGGTTT+TGG | - | chr4.4:50467210-50467229 | None:intergenic | 30.0% |
| !! | ATTTTAGAAGACTTACCATG+TGG | - | chr4.4:50470856-50470875 | None:intergenic | 30.0% |
| !! | GATCTGATTTTATTTCTTGC+TGG | + | chr4.4:50470028-50470047 | MS.gene88176:CDS | 30.0% |
| !! | TCCTTTGATTTTAGGTATTG+GGG | + | chr4.4:50469928-50469947 | MS.gene88176:intron | 30.0% |
| !!! | ATGCTTTTTCTATGGGAAAA+AGG | - | chr4.4:50468750-50468769 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCTATGGGAAAAA+GGG | - | chr4.4:50468749-50468768 | None:intergenic | 30.0% |
| !!! | TTGATTGCTTCTTTGGTTTT+GGG | - | chr4.4:50467209-50467228 | None:intergenic | 30.0% |
| ACTAAGGCTATTACCTCAAA+CGG | - | chr4.4:50467661-50467680 | None:intergenic | 35.0% | |
| AGAGACAACATATCCTCTAA+AGG | - | chr4.4:50468923-50468942 | None:intergenic | 35.0% | |
| AGATCTTTCAATCACTACAC+AGG | + | chr4.4:50471194-50471213 | MS.gene88176:CDS | 35.0% | |
| AGCAGAAAAATATGGTGCAA+AGG | + | chr4.4:50469802-50469821 | MS.gene88176:CDS | 35.0% | |
| AGGTCATCTTAGAGTTTATG+TGG | + | chr4.4:50470078-50470097 | MS.gene88176:CDS | 35.0% | |
| AGGTTCAAGAGTTGAATTCT+AGG | + | chr4.4:50467567-50467586 | MS.gene88176:CDS | 35.0% | |
| ATATATATCCTCTGTGGACA+TGG | + | chr4.4:50469218-50469237 | MS.gene88176:intron | 35.0% | |
| ATTTCAAGGACTCATCATTG+CGG | + | chr4.4:50467269-50467288 | MS.gene88176:CDS | 35.0% | |
| CAAAGGGTTTACTTACTCTT+TGG | + | chr4.4:50469819-50469838 | MS.gene88176:CDS | 35.0% | |
| CAACTAGAGAGGAATTGTTA+AGG | + | chr4.4:50469984-50470003 | MS.gene88176:CDS | 35.0% | |
| CCACTTAAACATTGGAAAGT+CGG | - | chr4.4:50470251-50470270 | None:intergenic | 35.0% | |
| CTAAATACCTGGATTCTTGA+TGG | - | chr4.4:50468449-50468468 | None:intergenic | 35.0% | |
| CTTGAAATCAAGTTTGGAAG+TGG | + | chr4.4:50467856-50467875 | MS.gene88176:intron | 35.0% | |
| GATGAAGATTTAAGAGCTGA+AGG | + | chr4.4:50468854-50468873 | MS.gene88176:CDS | 35.0% | |
| GCAGAAAAATATGGTGCAAA+GGG | + | chr4.4:50469803-50469822 | MS.gene88176:CDS | 35.0% | |
| GCATCGTCAGAATTCAATTT+AGG | - | chr4.4:50467614-50467633 | None:intergenic | 35.0% | |
| GCTGAAGCAATGAATAGATA+TGG | + | chr4.4:50469368-50469387 | MS.gene88176:CDS | 35.0% | |
| GGAATCAGAGAAAATCTTGA+AGG | - | chr4.4:50469702-50469721 | None:intergenic | 35.0% | |
| GGTTAATTCCTTGCTTTCTA+AGG | + | chr4.4:50467877-50467896 | MS.gene88176:intron | 35.0% | |
| GTATCAGTCGCAAAATTGTA+AGG | - | chr4.4:50470554-50470573 | None:intergenic | 35.0% | |
| GTGTTCAAATGAAGATACAC+CGG | - | chr4.4:50470974-50470993 | None:intergenic | 35.0% | |
| TAAACGCGACATACAACAAA+AGG | + | chr4.4:50470624-50470643 | MS.gene88176:CDS | 35.0% | |
| TACTTTATGTCAGATTGGTG+GGG | + | chr4.4:50470585-50470604 | MS.gene88176:intron | 35.0% | |
| TATGGATACCTTACAAAGCA+AGG | - | chr4.4:50467789-50467808 | None:intergenic | 35.0% | |
| TCTAGATCAAATCTGGTATC+TGG | - | chr4.4:50469404-50469423 | None:intergenic | 35.0% | |
| TCTTAATTATGGGATTGTGC+AGG | + | chr4.4:50470381-50470400 | MS.gene88176:intron | 35.0% | |
| TGAATTCTAACATGTTGCTG+CGG | + | chr4.4:50468201-50468220 | MS.gene88176:CDS | 35.0% | |
| TGATGGAACTAAATATTCCC+GGG | - | chr4.4:50468432-50468451 | None:intergenic | 35.0% | |
| TTAAATATCTGAGGGCTTTG+TGG | - | chr4.4:50468595-50468614 | None:intergenic | 35.0% | |
| TTGTTCATGTCTTCAGGATT+TGG | - | chr4.4:50470430-50470449 | None:intergenic | 35.0% | |
| TTTGCAGTCTCACTTATTTC+AGG | + | chr4.4:50469145-50469164 | MS.gene88176:intron | 35.0% | |
| ! | AATGGCTTTTACTCCTTTAG+AGG | + | chr4.4:50468907-50468926 | MS.gene88176:CDS | 35.0% |
| ! | AGGCCAAACATTCAATTTTG+TGG | + | chr4.4:50470221-50470240 | MS.gene88176:intron | 35.0% |
| ! | AGGTATCTGACATTTTCTCA+GGG | + | chr4.4:50469672-50469691 | MS.gene88176:intron | 35.0% |
| ! | AGTTGCTCTATAACTGCTTT+TGG | + | chr4.4:50467936-50467955 | MS.gene88176:intron | 35.0% |
| ! | CAAGATTTTCTCTGATTCCT+TGG | + | chr4.4:50469703-50469722 | MS.gene88176:CDS | 35.0% |
| ! | CATTCAGTCATGGTTTTTCA+TGG | + | chr4.4:50467723-50467742 | MS.gene88176:intron | 35.0% |
| ! | CGACTCCATTCCTTATATTT+TGG | + | chr4.4:50470690-50470709 | MS.gene88176:intron | 35.0% |
| ! | CTTATGACATGGTTTTCAAC+GGG | + | chr4.4:50470473-50470492 | MS.gene88176:CDS | 35.0% |
| ! | GCTTATGACATGGTTTTCAA+CGG | + | chr4.4:50470472-50470491 | MS.gene88176:CDS | 35.0% |
| ! | TAACGAAGAGTTGATCAGAA+AGG | + | chr4.4:50468943-50468962 | MS.gene88176:CDS | 35.0% |
| ! | TGGTCTTACCAGTGAAAAAA+TGG | - | chr4.4:50467702-50467721 | None:intergenic | 35.0% |
| ! | TTATGACATGGTTTTCAACG+GGG | + | chr4.4:50470474-50470493 | MS.gene88176:CDS | 35.0% |
| ! | TTTAGTTCCATCAAGAATCC+AGG | + | chr4.4:50468439-50468458 | MS.gene88176:CDS | 35.0% |
| !! | AAAGTATTGTGTGTACCTTC+TGG | + | chr4.4:50469743-50469762 | MS.gene88176:CDS | 35.0% |
| !! | AGAAGACATTCATGGTTTTG+TGG | + | chr4.4:50468256-50468275 | MS.gene88176:CDS | 35.0% |
| !!! | ACTGTGCAGTTGTTGTTTTT+GGG | - | chr4.4:50471128-50471147 | None:intergenic | 35.0% |
| !!! | ATGTATTTTGGGTTTGCGAA+GGG | - | chr4.4:50467165-50467184 | None:intergenic | 35.0% |
| !!! | CAAAAGGTTTTTGAGACTCT+AGG | + | chr4.4:50470640-50470659 | MS.gene88176:CDS | 35.0% |
| !!! | CCTTTGATTTTAGGTATTGG+GGG | + | chr4.4:50469929-50469948 | MS.gene88176:intron | 35.0% |
| !!! | TTAACTTTTTCATTGGCTGC+AGG | + | chr4.4:50469652-50469671 | MS.gene88176:intron | 35.0% |
| AAACCTAAAACGCGAGTATG+TGG | + | chr4.4:50467457-50467476 | MS.gene88176:CDS | 40.0% | |
| AAAGCAGATGCCAACTTACA+TGG | - | chr4.4:50470126-50470145 | None:intergenic | 40.0% | |
| AAGCAAATGCTAATGGTAGC+TGG | + | chr4.4:50468613-50468632 | MS.gene88176:CDS | 40.0% | |
| AATCCCTCCAAAGGATTTCA+AGG | + | chr4.4:50467255-50467274 | MS.gene88176:CDS | 40.0% | |
| ACTTTATGTCAGATTGGTGG+GGG | + | chr4.4:50470586-50470605 | MS.gene88176:intron | 40.0% | |
| AGACATGAACAACCTTGCAT+CGG | + | chr4.4:50470438-50470457 | MS.gene88176:CDS | 40.0% | |
| AGACCTAACAACACCTTGAA+TGG | - | chr4.4:50467486-50467505 | None:intergenic | 40.0% | |
| AGTCCTTGAAATCCTTTGGA+GGG | - | chr4.4:50467261-50467280 | None:intergenic | 40.0% | |
| ATATCCAGTTGTGTGAACTC+AGG | - | chr4.4:50468884-50468903 | None:intergenic | 40.0% | |
| ATCGACTACGAGATGAAAAC+CGG | + | chr4.4:50467521-50467540 | MS.gene88176:CDS | 40.0% | |
| ATGTAAAACCATGTCCACAG+AGG | - | chr4.4:50469229-50469248 | None:intergenic | 40.0% | |
| ATTCAGTTTATCGACAAGGG+AGG | - | chr4.4:50470895-50470914 | None:intergenic | 40.0% | |
| CACAAACAGTGATTCAACAC+AGG | - | chr4.4:50469494-50469513 | None:intergenic | 40.0% | |
| CACACAACTGGATATGGAAA+TGG | + | chr4.4:50468889-50468908 | MS.gene88176:CDS | 40.0% | |
| CAGCAAGATGAAGCAAATCT+AGG | - | chr4.4:50469627-50469646 | None:intergenic | 40.0% | |
| CCCCCAATACCTAAAATCAA+AGG | - | chr4.4:50469932-50469951 | None:intergenic | 40.0% | |
| CCGACTTTCCAATGTTTAAG+TGG | + | chr4.4:50470248-50470267 | MS.gene88176:CDS | 40.0% | |
| CTAATGAGGAAATCCGTTTG+AGG | + | chr4.4:50467645-50467664 | MS.gene88176:CDS | 40.0% | |
| CTTCTTGAAGCTCTTGACAT+GGG | + | chr4.4:50470823-50470842 | MS.gene88176:CDS | 40.0% | |
| GAAAAACCATGACTGAATGC+TGG | - | chr4.4:50467722-50467741 | None:intergenic | 40.0% | |
| GAATTATCTTCCAACGACGT+CGG | + | chr4.4:50467293-50467312 | MS.gene88176:CDS | 40.0% | |
| GATCAAATCTGGTATCTGGA+TGG | - | chr4.4:50469400-50469419 | None:intergenic | 40.0% | |
| GATGAGTCCTTGAAATCCTT+TGG | - | chr4.4:50467265-50467284 | None:intergenic | 40.0% | |
| GTCACATGAATTATGAAGCG+AGG | + | chr4.4:50468553-50468572 | MS.gene88176:intron | 40.0% | |
| GTTTGATCGACCATGTAAGT+TGG | + | chr4.4:50470113-50470132 | MS.gene88176:intron | 40.0% | |
| TATGGACACCTTAGAAAGCA+AGG | - | chr4.4:50467888-50467907 | None:intergenic | 40.0% | |
| TATGGATTCTGCAACTAGAG+AGG | + | chr4.4:50469973-50469992 | MS.gene88176:CDS | 40.0% | |
| TCTTCTTGAAGCTCTTGACA+TGG | + | chr4.4:50470822-50470841 | MS.gene88176:CDS | 40.0% | |
| TGAAAGATCTCTCAGCTGTT+GGG | - | chr4.4:50471184-50471203 | None:intergenic | 40.0% | |
| TGAGTTCACACAACTGGATA+TGG | + | chr4.4:50468883-50468902 | MS.gene88176:CDS | 40.0% | |
| TGTAAGGCTCGCAAGTTAAA+GGG | - | chr4.4:50470538-50470557 | None:intergenic | 40.0% | |
| TTAGAAGACTTACCATGTGG+CGG | - | chr4.4:50470853-50470872 | None:intergenic | 40.0% | |
| TTAGTCTGCACATCGTACTT+TGG | + | chr4.4:50468313-50468332 | MS.gene88176:intron | 40.0% | |
| TTCAAAACAGAATGTGCGAC+TGG | - | chr4.4:50467437-50467456 | None:intergenic | 40.0% | |
| TTCTTGAAGCTCTTGACATG+GGG | + | chr4.4:50470824-50470843 | MS.gene88176:CDS | 40.0% | |
| TTGAAAGATCTCTCAGCTGT+TGG | - | chr4.4:50471185-50471204 | None:intergenic | 40.0% | |
| TTGAATTCTGACGATGCAGA+AGG | + | chr4.4:50467617-50467636 | MS.gene88176:CDS | 40.0% | |
| TTGTAAGGCTCGCAAGTTAA+AGG | - | chr4.4:50470539-50470558 | None:intergenic | 40.0% | |
| TTTATCGACAAGGGAGGAAT+GGG | - | chr4.4:50470889-50470908 | None:intergenic | 40.0% | |
| ! | AATTCAGATTAGTCGAAGCC+AGG | - | chr4.4:50470759-50470778 | None:intergenic | 40.0% |
| ! | AGATTGGTTATGTTGCTAGC+TGG | + | chr4.4:50471072-50471091 | MS.gene88176:CDS | 40.0% |
| ! | CAGGTATCTGACATTTTCTC+AGG | + | chr4.4:50469671-50469690 | MS.gene88176:intron | 40.0% |
| ! | CTCAAACGGATTTCCTCATT+AGG | - | chr4.4:50467647-50467666 | None:intergenic | 40.0% |
| ! | GAAGAGTTGATCAGAAAGGT+TGG | + | chr4.4:50468947-50468966 | MS.gene88176:intron | 40.0% |
| ! | GTAAGGTATCCATATCTAGG+TGG | + | chr4.4:50467795-50467814 | MS.gene88176:intron | 40.0% |
| ! | GTACTTTGGTTGTTGGTGTT+TGG | + | chr4.4:50468327-50468346 | MS.gene88176:intron | 40.0% |
| ! | GTGGTCTCTAAGAATGAGAA+TGG | - | chr4.4:50467375-50467394 | None:intergenic | 40.0% |
| ! | TTGAAATCCTTTGGAGGGAT+TGG | - | chr4.4:50467256-50467275 | None:intergenic | 40.0% |
| !! | AATACAGGAGGCATAGCTTT+TGG | + | chr4.4:50471042-50471061 | MS.gene88176:intron | 40.0% |
| !! | GGTATCGATGTCTTGATCTA+AGG | + | chr4.4:50468168-50468187 | MS.gene88176:intron | 40.0% |
| !!! | AGACATTCATGGTTTTGTGG+AGG | + | chr4.4:50468259-50468278 | MS.gene88176:CDS | 40.0% |
| !!! | AGCTTTTGGTTTGGACAGAT+TGG | + | chr4.4:50471056-50471075 | MS.gene88176:CDS | 40.0% |
| !!! | CACTGTGCAGTTGTTGTTTT+TGG | - | chr4.4:50471129-50471148 | None:intergenic | 40.0% |
| !!! | GATGTATTTTGGGTTTGCGA+AGG | - | chr4.4:50467166-50467185 | None:intergenic | 40.0% |
| AAACCGTTCGTCTTTGTGGT+TGG | + | chr4.4:50467318-50467337 | MS.gene88176:CDS | 45.0% | |
| AAATATTCCCGGGAACCTTC+TGG | - | chr4.4:50468422-50468441 | None:intergenic | 45.0% | |
| AACCCAACCACAAAGACGAA+CGG | - | chr4.4:50467324-50467343 | None:intergenic | 45.0% | |
| AACCGTTCGTCTTTGTGGTT+GGG | + | chr4.4:50467319-50467338 | MS.gene88176:CDS | 45.0% | |
| AATAACTCCACCACACTCCA+AGG | - | chr4.4:50469723-50469742 | None:intergenic | 45.0% | |
| AATTACCAAACCCTTTCCCC+AGG | + | chr4.4:50469336-50469355 | MS.gene88176:CDS | 45.0% | |
| ACAACCTGAGTTCACACAAC+TGG | + | chr4.4:50468877-50468896 | MS.gene88176:CDS | 45.0% | |
| AGGCATGTCCTTGCTTTGTA+AGG | + | chr4.4:50467778-50467797 | MS.gene88176:intron | 45.0% | |
| AGTGGAATGAATCGAAGCAG+AGG | + | chr4.4:50470266-50470285 | MS.gene88176:CDS | 45.0% | |
| ATTGTTAAGGCGATGCTCTG+CGG | + | chr4.4:50469997-50470016 | MS.gene88176:CDS | 45.0% | |
| CATATGTAAGCCTGGGGAAA+GGG | - | chr4.4:50469349-50469368 | None:intergenic | 45.0% | |
| CATTGAGGTTGCTGCAAATG+AGG | + | chr4.4:50467547-50467566 | MS.gene88176:CDS | 45.0% | |
| CCTTGTAGGATCCAAATTGG+CGG | + | chr4.4:50469580-50469599 | MS.gene88176:intron | 45.0% | |
| CTCATTCTTAGAGACCACAC+CGG | + | chr4.4:50467377-50467396 | MS.gene88176:CDS | 45.0% | |
| CTTCAGCATATGTAAGCCTG+GGG | - | chr4.4:50469355-50469374 | None:intergenic | 45.0% | |
| CTTTATGTCAGATTGGTGGG+GGG | + | chr4.4:50470587-50470606 | MS.gene88176:intron | 45.0% | |
| GAAAGATCTCTCAGCTGTTG+GGG | - | chr4.4:50471183-50471202 | None:intergenic | 45.0% | |
| GAGTCCTTGAAATCCTTTGG+AGG | - | chr4.4:50467262-50467281 | None:intergenic | 45.0% | |
| GCAAGGTTGTTCATGTCTTC+AGG | - | chr4.4:50470436-50470455 | None:intergenic | 45.0% | |
| GCACATCGTACTTTGGTTGT+TGG | + | chr4.4:50468320-50468339 | MS.gene88176:intron | 45.0% | |
| GCTTCAGCATATGTAAGCCT+GGG | - | chr4.4:50469356-50469375 | None:intergenic | 45.0% | |
| GGTAAAACCGTTCGTCTTTG+TGG | + | chr4.4:50467314-50467333 | MS.gene88176:CDS | 45.0% | |
| GGTGTGGATCTTGACAGTAT+CGG | - | chr4.4:50468401-50468420 | None:intergenic | 45.0% | |
| GTAAGACCAGCATTCAGTCA+TGG | + | chr4.4:50467713-50467732 | MS.gene88176:intron | 45.0% | |
| GTTGAACTTCACAGACGCTA+CGG | + | chr4.4:50467341-50467360 | MS.gene88176:CDS | 45.0% | |
| GTTTATCGACAAGGGAGGAA+TGG | - | chr4.4:50470890-50470909 | None:intergenic | 45.0% | |
| TAACCTGAATAATGCCGGTG+TGG | - | chr4.4:50467394-50467413 | None:intergenic | 45.0% | |
| TCACAGCTTCCACCTAGATA+TGG | - | chr4.4:50467807-50467826 | None:intergenic | 45.0% | |
| TCTTGAAGCTCTTGACATGG+GGG | + | chr4.4:50470825-50470844 | MS.gene88176:CDS | 45.0% | |
| TGAGACTCTAGGCATCTCAA+TGG | + | chr4.4:50470651-50470670 | MS.gene88176:CDS | 45.0% | |
| TGCAGAAGGTTCTCCTAATG+AGG | + | chr4.4:50467631-50467650 | MS.gene88176:CDS | 45.0% | |
| TGCTTCAGCATATGTAAGCC+TGG | - | chr4.4:50469357-50469376 | None:intergenic | 45.0% | |
| TGTAGAGTTTGCCGCCAATT+TGG | - | chr4.4:50469594-50469613 | None:intergenic | 45.0% | |
| TTATCGACAAGGGAGGAATG+GGG | - | chr4.4:50470888-50470907 | None:intergenic | 45.0% | |
| TTCTCTGATTCCTTGGAGTG+TGG | + | chr4.4:50469710-50469729 | MS.gene88176:CDS | 45.0% | |
| TTTCAGGCTGAAGCGAAGTA+TGG | + | chr4.4:50470796-50470815 | MS.gene88176:intron | 45.0% | |
| ! | GAGCCTTGTAGGATCCAAAT+TGG | + | chr4.4:50469577-50469596 | MS.gene88176:intron | 45.0% |
| ! | GATGAAAACCGGCTTCATTG+AGG | + | chr4.4:50467532-50467551 | MS.gene88176:CDS | 45.0% |
| !! | AGGAGGCATAGCTTTTGGTT+TGG | + | chr4.4:50471047-50471066 | MS.gene88176:intron | 45.0% |
| !! | CTGCCATTCAAGGTGTTGTT+AGG | + | chr4.4:50467480-50467499 | MS.gene88176:CDS | 45.0% |
| !! | TCAGGATTTGGTGCAGTGAA+AGG | - | chr4.4:50470418-50470437 | None:intergenic | 45.0% |
| !! | TCGTGCATTGGCTTATGACA+TGG | + | chr4.4:50470462-50470481 | MS.gene88176:CDS | 45.0% |
| !! | TTGTGGAGGTACTATCCAGT+AGG | + | chr4.4:50468273-50468292 | MS.gene88176:intron | 45.0% |
| !!! | ATTTTGGGTTTGCGAAGGGA+TGG | - | chr4.4:50467161-50467180 | None:intergenic | 45.0% |
| !!! | TTTTGGGTTTGCGAAGGGAT+GGG | - | chr4.4:50467160-50467179 | None:intergenic | 45.0% |
| AGACCACACCGGCATTATTC+AGG | + | chr4.4:50467388-50467407 | MS.gene88176:CDS | 50.0% | |
| CATGTTGCTGCGGCATAATG+TGG | + | chr4.4:50468211-50468230 | MS.gene88176:CDS | 50.0% | |
| CCACACTCAAGCACGAGATA+TGG | - | chr4.4:50467906-50467925 | None:intergenic | 50.0% | |
| CCATATCTCGTGCTTGAGTG+TGG | + | chr4.4:50467903-50467922 | MS.gene88176:intron | 50.0% | |
| CCGCCAATTTGGATCCTACA+AGG | - | chr4.4:50469583-50469602 | None:intergenic | 50.0% | |
| CTGTCAAGATCCACACCAGA+AGG | + | chr4.4:50468404-50468423 | MS.gene88176:CDS | 50.0% | |
| GAGTATGTGGCTGCCATTCA+AGG | + | chr4.4:50467470-50467489 | MS.gene88176:CDS | 50.0% | |
| GCATATGTAAGCCTGGGGAA+AGG | - | chr4.4:50469350-50469369 | None:intergenic | 50.0% | |
| TAATGCCTTCAACGCATGCC+TGG | + | chr4.4:50470738-50470757 | MS.gene88176:intron | 50.0% | |
| TCTAGGCATCTCAATGGAGC+AGG | + | chr4.4:50470657-50470676 | MS.gene88176:CDS | 50.0% | |
| TCTGATTCCTTGGAGTGTGG+TGG | + | chr4.4:50469713-50469732 | MS.gene88176:CDS | 50.0% | |
| TGAATCGAAGCAGAGGCTTG+AGG | + | chr4.4:50470273-50470292 | MS.gene88176:CDS | 50.0% | |
| TGCAGCAACCTCAATGAAGC+CGG | - | chr4.4:50467543-50467562 | None:intergenic | 50.0% | |
| TTGGATCCTACAAGGCTCGA+GGG | - | chr4.4:50469575-50469594 | None:intergenic | 50.0% | |
| TTGTTAAGGCGATGCTCTGC+GGG | + | chr4.4:50469998-50470017 | MS.gene88176:CDS | 50.0% | |
| TTTGGATCCTACAAGGCTCG+AGG | - | chr4.4:50469576-50469595 | None:intergenic | 50.0% | |
| ! | AACGGTTTTACCGACGTCGT+TGG | - | chr4.4:50467306-50467325 | None:intergenic | 50.0% |
| ! | ACTAATCCCTCGAGCCTTGT+AGG | + | chr4.4:50469566-50469585 | MS.gene88176:intron | 50.0% |
| ! | CAGCCACATACTCGCGTTTT+AGG | - | chr4.4:50467463-50467482 | None:intergenic | 50.0% |
| ! | CATGGTTTTCAACGGGGTGA+AGG | + | chr4.4:50470480-50470499 | MS.gene88176:CDS | 50.0% |
| ! | TATCTGAGGGCTTTGTGGCA+AGG | - | chr4.4:50468590-50468609 | None:intergenic | 50.0% |
| !! | AGGGATTGGTTGAGGGGTTT+AGG | - | chr4.4:50467242-50467261 | None:intergenic | 50.0% |
| !! | CCTTTGGAGGGATTGGTTGA+GGG | - | chr4.4:50467249-50467268 | None:intergenic | 50.0% |
| !! | CTTTGGAGGGATTGGTTGAG+GGG | - | chr4.4:50467248-50467267 | None:intergenic | 50.0% |
| !! | TCCTTTGGAGGGATTGGTTG+AGG | - | chr4.4:50467250-50467269 | None:intergenic | 50.0% |
| ATCCACACCAGAAGGTTCCC+GGG | + | chr4.4:50468412-50468431 | MS.gene88176:CDS | 55.0% | |
| CCCTCAACCAATCCCTCCAA+AGG | + | chr4.4:50467246-50467265 | MS.gene88176:CDS | 55.0% | |
| CTCGGAAGGTGATCTCGTGA+GGG | - | chr4.4:50471154-50471173 | None:intergenic | 55.0% | |
| GAACTTCACAGACGCTACGG+TGG | + | chr4.4:50467344-50467363 | MS.gene88176:CDS | 55.0% | |
| GAGTACTTCGCTGCACCAGA+AGG | - | chr4.4:50469761-50469780 | None:intergenic | 55.0% | |
| GATCCACACCAGAAGGTTCC+CGG | + | chr4.4:50468411-50468430 | MS.gene88176:CDS | 55.0% | |
| GGCTCGCAAGTTAAAGGGAG+AGG | - | chr4.4:50470533-50470552 | None:intergenic | 55.0% | |
| GTAAGCCTGGGGAAAGGGTT+TGG | - | chr4.4:50469344-50469363 | None:intergenic | 55.0% | |
| TAGTCTCCGCAAGTTGCGCA+CGG | - | chr4.4:50469550-50469569 | None:intergenic | 55.0% | |
| TATCCTCCGTGCGCAACTTG+CGG | + | chr4.4:50469541-50469560 | MS.gene88176:intron | 55.0% | |
| AGTTGCGCACGGAGGATACC+TGG | - | chr4.4:50469539-50469558 | None:intergenic | 60.0% | |
| CACGAGATCACCTTCCGAGG+TGG | + | chr4.4:50471155-50471174 | MS.gene88176:CDS | 60.0% | |
| CAGCTGTTGGGGATCCACCT+CGG | - | chr4.4:50471172-50471191 | None:intergenic | 60.0% | |
| CCAATGCACGAGCCGATGCA+AGG | - | chr4.4:50470453-50470472 | None:intergenic | 60.0% | |
| CCTCACGAGATCACCTTCCG+AGG | + | chr4.4:50471152-50471171 | MS.gene88176:CDS | 60.0% | |
| CCTCGGAAGGTGATCTCGTG+AGG | - | chr4.4:50471155-50471174 | None:intergenic | 60.0% | |
| CGAAGCCAGGCATGCGTTGA+AGG | - | chr4.4:50470746-50470765 | None:intergenic | 60.0% | |
| TGTTGGGGATCCACCTCGGA+AGG | - | chr4.4:50471168-50471187 | None:intergenic | 60.0% | |
| TTCCCGGGAACCTTCTGGTG+TGG | - | chr4.4:50468417-50468436 | None:intergenic | 60.0% | |
| ! | AAGGGATGGGCTTCGCCGAA+TGG | - | chr4.4:50467147-50467166 | None:intergenic | 60.0% |
| !! | CCTTGCATCGGCTCGTGCAT+TGG | + | chr4.4:50470450-50470469 | MS.gene88176:CDS | 60.0% |
| TCTCCGCAAGTTGCGCACGG+AGG | - | chr4.4:50469547-50469566 | None:intergenic | 65.0% | |
| GACATGGGGGCTCCGCCACA+TGG | + | chr4.4:50470838-50470857 | MS.gene88176:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 50467107 | 50471230 | 50467107 | ID=MS.gene88176 |
| chr4.4 | mRNA | 50467107 | 50471230 | 50467107 | ID=MS.gene88176.t1;Parent=MS.gene88176 |
| chr4.4 | exon | 50467107 | 50467666 | 50467107 | ID=MS.gene88176.t1.exon1;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50467107 | 50467666 | 50467107 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50468169 | 50468280 | 50468169 | ID=MS.gene88176.t1.exon2;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50468169 | 50468280 | 50468169 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50468389 | 50468460 | 50468389 | ID=MS.gene88176.t1.exon3;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50468389 | 50468460 | 50468389 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50468571 | 50468662 | 50468571 | ID=MS.gene88176.t1.exon4;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50468571 | 50468662 | 50468571 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50468844 | 50468964 | 50468844 | ID=MS.gene88176.t1.exon5;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50468844 | 50468964 | 50468844 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50469311 | 50469433 | 50469311 | ID=MS.gene88176.t1.exon6;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50469311 | 50469433 | 50469311 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50469674 | 50469854 | 50469674 | ID=MS.gene88176.t1.exon7;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50469674 | 50469854 | 50469674 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50469942 | 50470126 | 50469942 | ID=MS.gene88176.t1.exon8;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50469942 | 50470126 | 50469942 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50470223 | 50470294 | 50470223 | ID=MS.gene88176.t1.exon9;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50470223 | 50470294 | 50470223 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50470403 | 50470501 | 50470403 | ID=MS.gene88176.t1.exon10;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50470403 | 50470501 | 50470403 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50470598 | 50470678 | 50470598 | ID=MS.gene88176.t1.exon11;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50470598 | 50470678 | 50470598 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50470802 | 50470859 | 50470802 | ID=MS.gene88176.t1.exon12;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50470802 | 50470859 | 50470802 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| chr4.4 | exon | 50471049 | 50471230 | 50471049 | ID=MS.gene88176.t1.exon13;Parent=MS.gene88176.t1 |
| chr4.4 | CDS | 50471049 | 50471230 | 50471049 | ID=cds.MS.gene88176.t1;Parent=MS.gene88176.t1 |
| Gene Sequence |
| Protein sequence |
