Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88642.t1 | XP_013458523.1 | 92.1 | 378 | 11 | 3 | 1 | 362 | 1 | 375 | 6.70E-176 | 626.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88642.t1 | Q9Y2D8 | 26.2 | 324 | 205 | 8 | 8 | 305 | 43 | 358 | 3.4e-19 | 97.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88642.t1 | A0A072URX3 | 92.1 | 378 | 11 | 3 | 1 | 362 | 1 | 375 | 4.8e-176 | 626.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049821 | MS.gene88642 | 0.800715 | 1.27E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene88642 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene050808 | MS.gene88642 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene88642 | 0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene88642 | 0.840215 | 9.94E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene88642 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene88642 | 0.815836 | 7.54E-52 | -1.69E-46 |
| MS.gene053563 | MS.gene88642 | 0.805232 | 1.47E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene88642 | 0.826097 | 3.27E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene88642 | 0.803187 | 3.93E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene88642 | 0.852287 | 5.10E-61 | -1.69E-46 |
| MS.gene058906 | MS.gene88642 | 0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene88642 | 0.843636 | 1.24E-58 | -1.69E-46 |
| MS.gene06001 | MS.gene88642 | 0.841048 | 6.02E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88642.t1 | MTR_4g127970 | 92.063 | 378 | 11 | 3 | 1 | 362 | 1 | 375 | 0.0 | 698 |
| MS.gene88642.t1 | MTR_4g127970 | 92.000 | 375 | 11 | 3 | 1 | 359 | 1 | 372 | 0.0 | 690 |
| MS.gene88642.t1 | MTR_4g127970 | 91.826 | 367 | 11 | 3 | 1 | 351 | 1 | 364 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88642.t1 | AT5G57410 | 72.559 | 379 | 79 | 6 | 1 | 360 | 1 | 373 | 0.0 | 525 |
| MS.gene88642.t1 | AT5G57410 | 72.178 | 381 | 81 | 6 | 1 | 362 | 1 | 375 | 0.0 | 525 |
| MS.gene88642.t1 | AT2G18876 | 70.213 | 376 | 92 | 4 | 4 | 362 | 6 | 378 | 0.0 | 507 |
| MS.gene88642.t1 | AT5G57410 | 74.852 | 338 | 61 | 5 | 42 | 360 | 1 | 333 | 1.08e-170 | 479 |
| MS.gene88642.t1 | AT2G18876 | 69.258 | 283 | 68 | 3 | 96 | 362 | 1 | 280 | 5.30e-129 | 371 |
Find 66 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAGAAAATGCTGATTTA+AGG | 0.209461 | 8.4:+6584421 | MS.gene88642:CDS |
| CTGAAGGAGACTTAGATCTT+AGG | 0.266475 | 8.4:+6582742 | MS.gene88642:CDS |
| ATTCGCCGATGTAAACAATT+TGG | 0.268664 | 8.4:+6582967 | MS.gene88642:CDS |
| CTTTCTGAGCATCTTGCAAT+TGG | 0.281888 | 8.4:-6585611 | None:intergenic |
| AGAGGATGGTTATTGGTATC+AGG | 0.297671 | 8.4:+6583723 | MS.gene88642:CDS |
| GAATTTCAGAGGATGGTTAT+TGG | 0.312259 | 8.4:+6583716 | MS.gene88642:CDS |
| GGAGATAATGAATTTGCTTC+AGG | 0.322573 | 8.4:+6584123 | MS.gene88642:CDS |
| CTAAGATCTAAGTCTCCTTC+AGG | 0.332420 | 8.4:-6582741 | None:intergenic |
| TCTCATTCTGCTTTCACAAC+CGG | 0.335124 | 8.4:+6582847 | MS.gene88642:CDS |
| AGCAAAGATGGCTTCTATAA+AGG | 0.358500 | 8.4:+6585477 | MS.gene88642:CDS |
| GATCGGTGCTAAAGCAAGTT+AGG | 0.379032 | 8.4:+6583843 | MS.gene88642:intron |
| AACCAATCACTCGTTACATT+TGG | 0.384759 | 8.4:+6583010 | MS.gene88642:CDS |
| TTTCATTAGTAGTGGGAGAT+TGG | 0.404934 | 8.4:-6585276 | None:intergenic |
| AAAGGAATACATTAAGTTGC+AGG | 0.407699 | 8.4:+6583898 | MS.gene88642:CDS |
| CTCATTCTGCTTTCACAACC+GGG | 0.410022 | 8.4:+6582848 | MS.gene88642:CDS |
| GCTAAAGTTGAGAGGCTTGA+TGG | 0.424851 | 8.4:+6583378 | MS.gene88642:CDS |
| AGCAGAAAATGCTGATTTAA+GGG | 0.431389 | 8.4:+6584422 | MS.gene88642:CDS |
| GAGGGATGAATTTCAGAGGA+TGG | 0.437656 | 8.4:+6583709 | MS.gene88642:CDS |
| GAGACTAAACCAAGTGTTGA+TGG | 0.441272 | 8.4:+6584072 | MS.gene88642:CDS |
| TTGATGTTATAGATTGTTGT+CGG | 0.446064 | 8.4:+6583338 | MS.gene88642:intron |
| TGAAGGAGACTTAGATCTTA+GGG | 0.451843 | 8.4:+6582743 | MS.gene88642:CDS |
| GATTGGTTTGGTAGTCCGTT+AGG | 0.455596 | 8.4:-6585259 | None:intergenic |
| GAGAATAGATCAAGTGAAGC+AGG | 0.463962 | 8.4:-6583037 | None:intergenic |
| ATGAAAGGTGGACGCTTATG+AGG | 0.465264 | 8.4:+6584380 | MS.gene88642:intron |
| TCTTCTTCTCCATCAACACT+TGG | 0.465829 | 8.4:-6584081 | None:intergenic |
| AAGGAGCATTATACAAGAGC+AGG | 0.468589 | 8.4:+6585698 | MS.gene88642:CDS |
| GGAGGCAACGTGAACATGAA+TGG | 0.471934 | 8.4:+6584244 | MS.gene88642:CDS |
| AACCAAATGTAACGAGTGAT+TGG | 0.476259 | 8.4:-6583012 | None:intergenic |
| AACATCTTGCAAAGTCTGAC+AGG | 0.478571 | 8.4:+6586164 | MS.gene88642:CDS |
| TGAGATGAAGAAGAAGGAAA+AGG | 0.485631 | 8.4:+6583880 | MS.gene88642:CDS |
| CAGGGAATCGGCACCGGCTG+AGG | 0.485878 | 8.4:+6586272 | MS.gene88642:intron |
| TAAGATCTAAGTCTCCTTCA+GGG | 0.487351 | 8.4:-6582740 | None:intergenic |
| AGAGAGTCTAAGAGCAAAGA+TGG | 0.492833 | 8.4:+6585465 | MS.gene88642:CDS |
| TTAGTAGTGGGAGATTGGTT+TGG | 0.493506 | 8.4:-6585271 | None:intergenic |
| GTCGGATATATCAAGATATG+AGG | 0.501288 | 8.4:+6583356 | MS.gene88642:CDS |
| CCTTCACATTCTCCGATGGT+TGG | 0.509391 | 8.4:+6585313 | MS.gene88642:CDS |
| TGATCTCTAGCCATGTGAAA+AGG | 0.512834 | 8.4:-6585436 | None:intergenic |
| TTCTCCGATGGTTGGAAGAA+CGG | 0.529147 | 8.4:+6585321 | MS.gene88642:CDS |
| GAGGCAACGTGAACATGAAT+GGG | 0.531701 | 8.4:+6584245 | MS.gene88642:CDS |
| AATACATGAGATGAAGAAGA+AGG | 0.539316 | 8.4:+6583874 | MS.gene88642:CDS |
| TGGAGAAGAAGAAAGAATCT+AGG | 0.539755 | 8.4:+6584092 | MS.gene88642:CDS |
| GAAAGAATCTAGGTCGGGCA+TGG | 0.541566 | 8.4:+6584102 | MS.gene88642:CDS |
| ATTGCAAGATGCTCAGAAAG+AGG | 0.551306 | 8.4:+6585614 | MS.gene88642:CDS |
| GGCATTGTTGAGATCAATGC+AGG | 0.551330 | 8.4:+6584443 | MS.gene88642:CDS |
| AAGCTCAACTTGTTGAAGCA+AGG | 0.554611 | 8.4:+6585679 | MS.gene88642:CDS |
| ACAACAATGCCTTCCCCTGA+AGG | 0.557896 | 8.4:+6582726 | None:intergenic |
| CATAAAATACATACCTCAGC+CGG | 0.561677 | 8.4:-6586285 | None:intergenic |
| AAGAAGAAAGAATCTAGGTC+GGG | 0.563858 | 8.4:+6584097 | MS.gene88642:CDS |
| TTGCAAAGTCTGACAGGCCA+AGG | 0.565306 | 8.4:+6586170 | MS.gene88642:CDS |
| CATACCGTTCTTCCAACCAT+CGG | 0.570593 | 8.4:-6585325 | None:intergenic |
| TCTAAGTCTCCTTCAGGGGA+AGG | 0.580264 | 8.4:-6582735 | None:intergenic |
| ATGTTCCAAATTGTTTACAT+CGG | 0.582928 | 8.4:-6582972 | None:intergenic |
| TAATCCTTCACATTCTCCGA+TGG | 0.586438 | 8.4:+6585309 | MS.gene88642:CDS |
| GTGAAAGCAGAATGAGAAGA+TGG | 0.586466 | 8.4:-6582841 | None:intergenic |
| GAAAGAGGCAGAAGTCACTT+CGG | 0.590207 | 8.4:+6585629 | MS.gene88642:CDS |
| TGTGGTAGGTTTCTATAGCA+AGG | 0.590695 | 8.4:+6583155 | MS.gene88642:intron |
| GTTGAATATGAAGGAGCGCA+TGG | 0.611243 | 8.4:+6585587 | MS.gene88642:intron |
| AGAATAGATCAAGTGAAGCA+GGG | 0.616733 | 8.4:-6583036 | None:intergenic |
| GAAGAAGAAAGAATCTAGGT+CGG | 0.617695 | 8.4:+6584096 | MS.gene88642:CDS |
| GATTTCTTAAATGCTCCTAA+CGG | 0.620088 | 8.4:+6585244 | MS.gene88642:CDS |
| AAGAGAGGGATGAATTTCAG+AGG | 0.623845 | 8.4:+6583705 | MS.gene88642:CDS |
| GATATGAGGCTAAAGTTGAG+AGG | 0.640641 | 8.4:+6583370 | MS.gene88642:CDS |
| CCAACCATCGGAGAATGTGA+AGG | 0.644590 | 8.4:-6585313 | None:intergenic |
| AAGATCTAAGTCTCCTTCAG+GGG | 0.653936 | 8.4:-6582739 | None:intergenic |
| GATAGCGACGATAACTAGAA+CGG | 0.680604 | 8.4:+6583425 | MS.gene88642:CDS |
| CTGCGAATGAACAAAGACAA+CGG | 0.734178 | 8.4:+6583239 | MS.gene88642:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAGTTTATAATGAT+AGG | - | chr8.4:6584320-6584339 | None:intergenic | 10.0% |
| !! | ATATAAAGTTTATAATGATA+GGG | - | chr8.4:6584319-6584338 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTGTAATGATTA+GGG | + | chr8.4:6586439-6586458 | MS.gene88642:intron | 10.0% |
| !!! | TATTTTATTTTGTAATGATT+AGG | + | chr8.4:6586438-6586457 | MS.gene88642:intron | 10.0% |
| !! | AAGAAATTAAAGAAGAAAAA+AGG | - | chr8.4:6582793-6582812 | None:intergenic | 15.0% |
| !! | AGAAATTAAAGAAGAAAAAA+GGG | - | chr8.4:6582792-6582811 | None:intergenic | 15.0% |
| !! | ATAAATTCTTTAATGCATTT+GGG | + | chr8.4:6584926-6584945 | MS.gene88642:intron | 15.0% |
| !! | ATTATTATAATAATGAAAGG+TGG | + | chr8.4:6584368-6584387 | MS.gene88642:intron | 15.0% |
| !! | TATAAATTCTTTAATGCATT+TGG | + | chr8.4:6584925-6584944 | MS.gene88642:intron | 15.0% |
| !! | TCATTATAAACTTTATATTC+TGG | + | chr8.4:6584321-6584340 | MS.gene88642:intron | 15.0% |
| !!! | ATGATTTTAAATTATGGTTT+TGG | + | chr8.4:6583455-6583474 | MS.gene88642:intron | 15.0% |
| !!! | ATTCATAATTTTTTATGCTT+TGG | + | chr8.4:6584729-6584748 | MS.gene88642:intron | 15.0% |
| !!! | ATTTACTTTTTGAATTTTAC+AGG | + | chr8.4:6586253-6586272 | MS.gene88642:intron | 15.0% |
| !!! | CTAACATTATTTTGTAAATA+AGG | - | chr8.4:6583537-6583556 | None:intergenic | 15.0% |
| !!! | TTCATAATTTTTTATGCTTT+GGG | + | chr8.4:6584730-6584749 | MS.gene88642:intron | 15.0% |
| !!! | TTTACTTTTTGAATTTTACA+GGG | + | chr8.4:6586254-6586273 | MS.gene88642:intron | 15.0% |
| !! | AATTATGAATGAAATGAGAA+CGG | - | chr8.4:6584719-6584738 | None:intergenic | 20.0% |
| !! | ATATATGAATTGTTTGTGTT+TGG | + | chr8.4:6585547-6585566 | MS.gene88642:intron | 20.0% |
| !! | ATCAAAGATCAAAATTCTTA+CGG | - | chr8.4:6583071-6583090 | None:intergenic | 20.0% |
| !! | ATTAGACTTAGAAATATGAA+AGG | + | chr8.4:6584027-6584046 | MS.gene88642:intron | 20.0% |
| !! | CAAAATAAAAATTACAACGA+TGG | - | chr8.4:6585097-6585116 | None:intergenic | 20.0% |
| !! | CAAATTCACACTATAAAATT+AGG | - | chr8.4:6586370-6586389 | None:intergenic | 20.0% |
| !! | GAAAATAAGATACATGTTTA+GGG | - | chr8.4:6585978-6585997 | None:intergenic | 20.0% |
| !! | TAAATTCTTTAATGCATTTG+GGG | + | chr8.4:6584927-6584946 | MS.gene88642:intron | 20.0% |
| !! | TATCAATCTTACTATTTGAT+CGG | + | chr8.4:6583826-6583845 | MS.gene88642:intron | 20.0% |
| !! | TGAAAATAAGATACATGTTT+AGG | - | chr8.4:6585979-6585998 | None:intergenic | 20.0% |
| !!! | AAACTAAATTGCTATTGAAT+TGG | + | chr8.4:6585890-6585909 | MS.gene88642:intron | 20.0% |
| !!! | ATTTTATAGTGTGAATTTGT+TGG | + | chr8.4:6586371-6586390 | MS.gene88642:intron | 20.0% |
| !!! | CAATTTTACCATATTATTAC+AGG | - | chr8.4:6587213-6587232 | None:intergenic | 20.0% |
| !!! | CTTTAAAGAACATTAGAAAT+GGG | + | chr8.4:6586929-6586948 | MS.gene88642:intron | 20.0% |
| !!! | TCATAATTTTTTATGCTTTG+GGG | + | chr8.4:6584731-6584750 | MS.gene88642:intron | 20.0% |
| !!! | TGTTCAATTTTGATATCATT+AGG | + | chr8.4:6583266-6583285 | MS.gene88642:intron | 20.0% |
| !!! | TTGTAATTTTTATTTTGCGT+AGG | + | chr8.4:6585100-6585119 | MS.gene88642:intron | 20.0% |
| !!! | TTGTGAATTTTGTGATAATT+TGG | + | chr8.4:6584192-6584211 | MS.gene88642:intron | 20.0% |
| ! | AAAGAAAAAATGAGACAGTT+AGG | - | chr8.4:6582818-6582837 | None:intergenic | 25.0% |
| ! | AACATGAACTCTAATAAATC+TGG | + | chr8.4:6585032-6585051 | MS.gene88642:intron | 25.0% |
| ! | AACTAATAGGAAATTTATCC+AGG | - | chr8.4:6586640-6586659 | None:intergenic | 25.0% |
| ! | AAGAAAAAATGAGACAGTTA+GGG | - | chr8.4:6582817-6582836 | None:intergenic | 25.0% |
| ! | AAGGAAAATCAATGAAACAT+GGG | - | chr8.4:6584546-6584565 | None:intergenic | 25.0% |
| ! | ACTTACAAATCTCATAATCT+AGG | - | chr8.4:6585199-6585218 | None:intergenic | 25.0% |
| ! | ATCTACTTCTAAATGTAAAG+TGG | - | chr8.4:6587242-6587261 | None:intergenic | 25.0% |
| ! | ATGTTCCAAATTGTTTACAT+CGG | - | chr8.4:6582975-6582994 | None:intergenic | 25.0% |
| ! | CAATAATAACTAAATGAACC+GGG | + | chr8.4:6584999-6585018 | MS.gene88642:intron | 25.0% |
| ! | GCAATAATAACTAAATGAAC+CGG | + | chr8.4:6584998-6585017 | MS.gene88642:intron | 25.0% |
| ! | GTGATAATATGTTATATTGC+AGG | + | chr8.4:6586126-6586145 | MS.gene88642:intron | 25.0% |
| ! | TACAACTTAATTAGCATGAT+AGG | + | chr8.4:6586740-6586759 | MS.gene88642:intron | 25.0% |
| ! | TATATGCAAGTACTTAATGA+TGG | - | chr8.4:6585532-6585551 | None:intergenic | 25.0% |
| ! | TCAAAGATCAAAATTCTTAC+GGG | - | chr8.4:6583070-6583089 | None:intergenic | 25.0% |
| ! | TCACAAAACGTTAAAAAGTT+AGG | - | chr8.4:6586778-6586797 | None:intergenic | 25.0% |
| ! | TGGGTATTATTATAGAACAA+CGG | - | chr8.4:6585151-6585170 | None:intergenic | 25.0% |
| ! | TTGATGTTATAGATTGTTGT+CGG | + | chr8.4:6583338-6583357 | MS.gene88642:intron | 25.0% |
| ! | TTTCTAAGTCTAATAACTTG+CGG | - | chr8.4:6584021-6584040 | None:intergenic | 25.0% |
| !! | ATGATCATATTGGTAGTAAT+TGG | + | chr8.4:6587184-6587203 | MS.gene88642:intron | 25.0% |
| !! | ATTGTTCTTTTCTGATTTAC+AGG | + | chr8.4:6587310-6587329 | MS.gene88642:intron | 25.0% |
| !! | ATTTGGGGAACTAATTATTT+TGG | + | chr8.4:6584942-6584961 | MS.gene88642:intron | 25.0% |
| !! | ATTTTGCATCATAGTAAAAC+AGG | - | chr8.4:6585777-6585796 | None:intergenic | 25.0% |
| !! | CATAAAGAACTAATTTGCAT+TGG | - | chr8.4:6585860-6585879 | None:intergenic | 25.0% |
| !! | GAGGCAATGATTTTAAATTA+TGG | + | chr8.4:6583449-6583468 | MS.gene88642:intron | 25.0% |
| !! | GTTTAATGTGAATGGTATTT+TGG | + | chr8.4:6583943-6583962 | MS.gene88642:intron | 25.0% |
| !! | TCAGATTTTTCATTAGTAGT+GGG | - | chr8.4:6585286-6585305 | None:intergenic | 25.0% |
| !! | TTCAGATTTTTCATTAGTAG+TGG | - | chr8.4:6585287-6585306 | None:intergenic | 25.0% |
| !! | TTGTTCTTTTCTGATTTACA+GGG | + | chr8.4:6587311-6587330 | MS.gene88642:intron | 25.0% |
| !! | TTTTGAATTTTACAGGGAAT+CGG | + | chr8.4:6586260-6586279 | MS.gene88642:intron | 25.0% |
| !!! | ATGTGTTGTTTTTGAAAATG+TGG | + | chr8.4:6583137-6583156 | MS.gene88642:intron | 25.0% |
| !!! | ATTGAATTGGTGTTTCTTTT+AGG | + | chr8.4:6585903-6585922 | MS.gene88642:intron | 25.0% |
| !!! | CTTTTGTTGTTTAATGTGAA+TGG | + | chr8.4:6583935-6583954 | MS.gene88642:intron | 25.0% |
| !!! | GCTTTAAAGAACATTAGAAA+TGG | + | chr8.4:6586928-6586947 | MS.gene88642:intron | 25.0% |
| !!! | TTTGTAAGTGTATTGATTAC+AGG | + | chr8.4:6585210-6585229 | MS.gene88642:intron | 25.0% |
| AAAGAACAATATCACAACAC+AGG | - | chr8.4:6587300-6587319 | None:intergenic | 30.0% | |
| AAATGAGAACGGAATTAAAG+TGG | - | chr8.4:6584708-6584727 | None:intergenic | 30.0% | |
| AAGAGAGAATTGAAGATGAT+AGG | - | chr8.4:6582886-6582905 | None:intergenic | 30.0% | |
| AATACATGAGATGAAGAAGA+AGG | + | chr8.4:6583874-6583893 | MS.gene88642:CDS | 30.0% | |
| AGAGAGAATTGAAGATGATA+GGG | - | chr8.4:6582885-6582904 | None:intergenic | 30.0% | |
| AGGAAAATCAATGAAACATG+GGG | - | chr8.4:6584545-6584564 | None:intergenic | 30.0% | |
| ATTATTAATTGCGTCCCAAT+TGG | + | chr8.4:6587264-6587283 | MS.gene88642:intron | 30.0% | |
| ATTGGAAGCCTGTAATAATA+TGG | + | chr8.4:6587202-6587221 | MS.gene88642:intron | 30.0% | |
| CAAAAATTTCTCTGATGCTT+GGG | - | chr8.4:6584859-6584878 | None:intergenic | 30.0% | |
| CAAGGAAAATCAATGAAACA+TGG | - | chr8.4:6584547-6584566 | None:intergenic | 30.0% | |
| CCTATTAGTTATGTTTATCG+AGG | + | chr8.4:6586650-6586669 | MS.gene88642:intron | 30.0% | |
| CCTCGATAAACATAACTAAT+AGG | - | chr8.4:6586653-6586672 | None:intergenic | 30.0% | |
| GAAAAACACTAAGAATACCT+TGG | - | chr8.4:6586190-6586209 | None:intergenic | 30.0% | |
| GAAAATCCAAAATCACATCA+AGG | - | chr8.4:6584565-6584584 | None:intergenic | 30.0% | |
| GATTTCTTAAATGCTCCTAA+CGG | + | chr8.4:6585244-6585263 | MS.gene88642:CDS | 30.0% | |
| GTTATGTTTATCGAGGTTAT+AGG | + | chr8.4:6586657-6586676 | MS.gene88642:intron | 30.0% | |
| TAACGTGTTCATTCTTTAAG+AGG | + | chr8.4:6584632-6584651 | MS.gene88642:intron | 30.0% | |
| TGTTTGTGTTTGGTTGTTAA+CGG | + | chr8.4:6585557-6585576 | MS.gene88642:intron | 30.0% | |
| TTCAACTATTAATGCTGACA+TGG | + | chr8.4:6586991-6587010 | MS.gene88642:intron | 30.0% | |
| TTGATCTGATTAAAATCCAC+TGG | + | chr8.4:6586822-6586841 | MS.gene88642:intron | 30.0% | |
| ! | AAAGGAATACATTAAGTTGC+AGG | + | chr8.4:6583898-6583917 | MS.gene88642:CDS | 30.0% |
| ! | ACTTATAAGTCCATGTCTTT+TGG | + | chr8.4:6585943-6585962 | MS.gene88642:intron | 30.0% |
| ! | ATCTGATGTTTTATGGTGTT+TGG | + | chr8.4:6585834-6585853 | MS.gene88642:intron | 30.0% |
| ! | ATTTGATCTTCCTTTTCACA+TGG | + | chr8.4:6585426-6585445 | MS.gene88642:CDS | 30.0% |
| ! | CTACAACTCCTACTTTAAAA+TGG | + | chr8.4:6583787-6583806 | MS.gene88642:intron | 30.0% |
| ! | GATTTTCCTTGATGTGATTT+TGG | + | chr8.4:6584556-6584575 | MS.gene88642:intron | 30.0% |
| ! | GCTATTCATCTGATGTTTTA+TGG | + | chr8.4:6585827-6585846 | MS.gene88642:intron | 30.0% |
| ! | GTTTGTCTGTTTCATGTTTT+GGG | + | chr8.4:6586313-6586332 | MS.gene88642:intron | 30.0% |
| ! | TAAGTGTTACTCTCTTGTTT+AGG | + | chr8.4:6583635-6583654 | MS.gene88642:intron | 30.0% |
| ! | TGTTTGTCTGTTTCATGTTT+TGG | + | chr8.4:6586312-6586331 | MS.gene88642:intron | 30.0% |
| ! | TTCTAAGTCTAATAACTTGC+GGG | - | chr8.4:6584020-6584039 | None:intergenic | 30.0% |
| !! | ACCAGTTGTATCTTTAAAAC+TGG | - | chr8.4:6586892-6586911 | None:intergenic | 30.0% |
| !! | AGCAGAAAATGCTGATTTAA+GGG | + | chr8.4:6584422-6584441 | MS.gene88642:CDS | 30.0% |
| !! | TAGCAGAAAATGCTGATTTA+AGG | + | chr8.4:6584421-6584440 | MS.gene88642:CDS | 30.0% |
| !! | TTATAGTGTGAATTTGTTGG+TGG | + | chr8.4:6586374-6586393 | MS.gene88642:intron | 30.0% |
| !! | TTTATGAGTTTGTTACTTGC+AGG | + | chr8.4:6585399-6585418 | MS.gene88642:intron | 30.0% |
| !!! | ATCAGAGAAATTTTTGGTGT+TGG | + | chr8.4:6584863-6584882 | MS.gene88642:intron | 30.0% |
| !!! | GAGCTAATCCATTTTAAAGT+AGG | - | chr8.4:6583798-6583817 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGAAAATGTGGT+AGG | + | chr8.4:6583141-6583160 | MS.gene88642:intron | 30.0% |
| !!! | TCCAGTTTTAAAGATACAAC+TGG | + | chr8.4:6586888-6586907 | MS.gene88642:intron | 30.0% |
| !!! | TGTTTGTTTTTGCTCTTTAG+CGG | + | chr8.4:6583563-6583582 | MS.gene88642:intron | 30.0% |
| !!! | TTCATGTTTCCTTTTTTTCC+CGG | - | chr8.4:6585020-6585039 | None:intergenic | 30.0% |
| AAACAGGATTCTAAATGCCT+TGG | - | chr8.4:6585761-6585780 | None:intergenic | 35.0% | |
| AAAGAAAGAAGAAAAAGCCG+TGG | - | chr8.4:6586025-6586044 | None:intergenic | 35.0% | |
| AAATGAGTTGTTCCCACAAT+AGG | - | chr8.4:6586852-6586871 | None:intergenic | 35.0% | |
| AACATTCAAAACTACGTGGA+TGG | - | chr8.4:6584155-6584174 | None:intergenic | 35.0% | |
| AACCAAATGTAACGAGTGAT+TGG | - | chr8.4:6583015-6583034 | None:intergenic | 35.0% | |
| AACCAATCACTCGTTACATT+TGG | + | chr8.4:6583010-6583029 | MS.gene88642:CDS | 35.0% | |
| AAGAAGAAAGAATCTAGGTC+GGG | + | chr8.4:6584097-6584116 | MS.gene88642:CDS | 35.0% | |
| AAGCAACATTCAAAACTACG+TGG | - | chr8.4:6584159-6584178 | None:intergenic | 35.0% | |
| AATATCACAACACAGGCATA+AGG | - | chr8.4:6587293-6587312 | None:intergenic | 35.0% | |
| ACATGGGGAAAAAAACACAT+AGG | - | chr8.4:6584530-6584549 | None:intergenic | 35.0% | |
| AGAATAGATCAAGTGAAGCA+GGG | - | chr8.4:6583039-6583058 | None:intergenic | 35.0% | |
| AGCAAAGATGGCTTCTATAA+AGG | + | chr8.4:6585477-6585496 | MS.gene88642:CDS | 35.0% | |
| AGTGTTGTGTAGTTAAATGC+CGG | - | chr8.4:6587117-6587136 | None:intergenic | 35.0% | |
| ATGTGCATAAACAGAAGGAA+GGG | + | chr8.4:6584223-6584242 | MS.gene88642:intron | 35.0% | |
| ATTCGCCGATGTAAACAATT+TGG | + | chr8.4:6582967-6582986 | MS.gene88642:CDS | 35.0% | |
| CAACGATGGATGAAAAACAA+AGG | - | chr8.4:6585083-6585102 | None:intergenic | 35.0% | |
| CATAAAATACATACCTCAGC+CGG | - | chr8.4:6586288-6586307 | None:intergenic | 35.0% | |
| CCAAAAATTTCTCTGATGCT+TGG | - | chr8.4:6584860-6584879 | None:intergenic | 35.0% | |
| CCTCAAACAAAATTGTTGCA+TGG | + | chr8.4:6586462-6586481 | MS.gene88642:intron | 35.0% | |
| CTAAATGAACCGGGAAAAAA+AGG | + | chr8.4:6585008-6585027 | MS.gene88642:intron | 35.0% | |
| CTTCAATTCTCTCTTTCGTA+GGG | + | chr8.4:6582891-6582910 | MS.gene88642:intron | 35.0% | |
| GAACTCTAATAAATCTGGTC+TGG | + | chr8.4:6585037-6585056 | MS.gene88642:intron | 35.0% | |
| GAAGAAGAAAGAATCTAGGT+CGG | + | chr8.4:6584096-6584115 | MS.gene88642:CDS | 35.0% | |
| GAATTTCAGAGGATGGTTAT+TGG | + | chr8.4:6583716-6583735 | MS.gene88642:CDS | 35.0% | |
| GACTTAGAAATATGAAAGGC+TGG | + | chr8.4:6584031-6584050 | MS.gene88642:intron | 35.0% | |
| GGCTTGAAAGTTGAATATGA+AGG | + | chr8.4:6585578-6585597 | MS.gene88642:intron | 35.0% | |
| GGGTTCGTGAAATAATTCAA+TGG | - | chr8.4:6584000-6584019 | None:intergenic | 35.0% | |
| GTATCATCGCATGATCATAT+TGG | + | chr8.4:6587174-6587193 | MS.gene88642:intron | 35.0% | |
| GTCGGATATATCAAGATATG+AGG | + | chr8.4:6583356-6583375 | MS.gene88642:CDS | 35.0% | |
| GTTAGCATTAGAGAGAAACT+TGG | + | chr8.4:6584768-6584787 | MS.gene88642:intron | 35.0% | |
| TAAAAATACTGCAGCTCTCA+AGG | + | chr8.4:6583662-6583681 | MS.gene88642:intron | 35.0% | |
| TAAGAAACCCAAACTCAGAT+AGG | - | chr8.4:6586493-6586512 | None:intergenic | 35.0% | |
| TAAGATCTAAGTCTCCTTCA+GGG | - | chr8.4:6582743-6582762 | None:intergenic | 35.0% | |
| TCTCTCCTTTAACAAATCCA+CGG | + | chr8.4:6586005-6586024 | MS.gene88642:intron | 35.0% | |
| TCTGTGTTTGTTTGTGTGTT+TGG | + | chr8.4:6583296-6583315 | MS.gene88642:intron | 35.0% | |
| TCTTCAATTCTCTCTTTCGT+AGG | + | chr8.4:6582890-6582909 | MS.gene88642:intron | 35.0% | |
| TGAAGGAGACTTAGATCTTA+GGG | + | chr8.4:6582743-6582762 | MS.gene88642:CDS | 35.0% | |
| TGAGATGAAGAAGAAGGAAA+AGG | + | chr8.4:6583880-6583899 | MS.gene88642:CDS | 35.0% | |
| TGGAGAAGAAGAAAGAATCT+AGG | + | chr8.4:6584092-6584111 | MS.gene88642:CDS | 35.0% | |
| TTACTGCAGCAGTACATATT+AGG | - | chr8.4:6586229-6586248 | None:intergenic | 35.0% | |
| TTGTGATGTGCATAAACAGA+AGG | + | chr8.4:6584218-6584237 | MS.gene88642:intron | 35.0% | |
| ! | AAGAGTGCAACTTTCAAAGA+AGG | + | chr8.4:6586698-6586717 | MS.gene88642:intron | 35.0% |
| ! | ATAAGTCCATGTCTTTTGGT+GGG | + | chr8.4:6585947-6585966 | MS.gene88642:intron | 35.0% |
| ! | CCAAGCATCAGAGAAATTTT+TGG | + | chr8.4:6584857-6584876 | MS.gene88642:intron | 35.0% |
| ! | CTTTTTGCAGCTTCTCAATT+TGG | - | chr8.4:6583688-6583707 | None:intergenic | 35.0% |
| ! | GAATACATTAAGTTGCAGGT+AGG | + | chr8.4:6583902-6583921 | MS.gene88642:intron | 35.0% |
| ! | GGAGATAATGAATTTGCTTC+AGG | + | chr8.4:6584123-6584142 | MS.gene88642:CDS | 35.0% |
| ! | TATAAGTCCATGTCTTTTGG+TGG | + | chr8.4:6585946-6585965 | MS.gene88642:intron | 35.0% |
| ! | TCATTCTTTAAGAGGTCTCT+GGG | + | chr8.4:6584640-6584659 | MS.gene88642:intron | 35.0% |
| ! | TTCATTCTTTAAGAGGTCTC+TGG | + | chr8.4:6584639-6584658 | MS.gene88642:intron | 35.0% |
| ! | TTTCATTAGTAGTGGGAGAT+TGG | - | chr8.4:6585279-6585298 | None:intergenic | 35.0% |
| !! | AAAAGCCGTGGATTTGTTAA+AGG | - | chr8.4:6586013-6586032 | None:intergenic | 35.0% |
| !! | AGATACAACTGGTTTGTACT+AGG | + | chr8.4:6586899-6586918 | MS.gene88642:intron | 35.0% |
| !! | CCATGCAACAATTTTGTTTG+AGG | - | chr8.4:6586465-6586484 | None:intergenic | 35.0% |
| !! | GTAAGTGTATTGATTACAGG+TGG | + | chr8.4:6585213-6585232 | MS.gene88642:intron | 35.0% |
| !! | TGGTTGGTGAAAAGTATCTT+TGG | + | chr8.4:6586394-6586413 | MS.gene88642:intron | 35.0% |
| !! | TTAGCGGTGGATTTTTGTTT+TGG | + | chr8.4:6583579-6583598 | MS.gene88642:intron | 35.0% |
| !!! | AGAGAAATTTTTGGTGTTGG+TGG | + | chr8.4:6584866-6584885 | MS.gene88642:intron | 35.0% |
| !!! | TAGCGGTGGATTTTTGTTTT+GGG | + | chr8.4:6583580-6583599 | MS.gene88642:intron | 35.0% |
| !!! | TCTGTTTCATGTTTTGGGTT+GGG | + | chr8.4:6586318-6586337 | MS.gene88642:intron | 35.0% |
| !!! | TTGTTTTGGGTACAATCTAG+TGG | + | chr8.4:6583593-6583612 | MS.gene88642:intron | 35.0% |
| AACATCTTGCAAAGTCTGAC+AGG | + | chr8.4:6586164-6586183 | MS.gene88642:CDS | 40.0% | |
| AAGAGAGGGATGAATTTCAG+AGG | + | chr8.4:6583705-6583724 | MS.gene88642:CDS | 40.0% | |
| AAGATCTAAGTCTCCTTCAG+GGG | - | chr8.4:6582742-6582761 | None:intergenic | 40.0% | |
| AGAGAGTCTAAGAGCAAAGA+TGG | + | chr8.4:6585465-6585484 | MS.gene88642:CDS | 40.0% | |
| AGAGGATGGTTATTGGTATC+AGG | + | chr8.4:6583723-6583742 | MS.gene88642:CDS | 40.0% | |
| AGCATTAGAGAGAAACTTGG+AGG | + | chr8.4:6584771-6584790 | MS.gene88642:intron | 40.0% | |
| AGGAAAAACCTCATGAATGG+TGG | + | chr8.4:6584791-6584810 | MS.gene88642:intron | 40.0% | |
| ATAGAACAACGGCCTTTACA+AGG | - | chr8.4:6585140-6585159 | None:intergenic | 40.0% | |
| ATTGCAACAAGTTAGGTCCA+AGG | + | chr8.4:6585741-6585760 | MS.gene88642:intron | 40.0% | |
| ATTGCAAGATGCTCAGAAAG+AGG | + | chr8.4:6585614-6585633 | MS.gene88642:CDS | 40.0% | |
| ATTGTTGAGATCAATGCAGG+TGG | + | chr8.4:6584446-6584465 | MS.gene88642:intron | 40.0% | |
| CTAAGATCTAAGTCTCCTTC+AGG | - | chr8.4:6582744-6582763 | None:intergenic | 40.0% | |
| CTCATGAATGGTGGTTGTAT+GGG | + | chr8.4:6584800-6584819 | MS.gene88642:intron | 40.0% | |
| CTCTAATAAATCTGGTCTGG+TGG | + | chr8.4:6585040-6585059 | MS.gene88642:intron | 40.0% | |
| CTGAAGGAGACTTAGATCTT+AGG | + | chr8.4:6582742-6582761 | MS.gene88642:CDS | 40.0% | |
| CTGCGAATGAACAAAGACAA+CGG | + | chr8.4:6583239-6583258 | MS.gene88642:CDS | 40.0% | |
| CTGTACTTCCTTCCTTGTAA+AGG | + | chr8.4:6585125-6585144 | MS.gene88642:intron | 40.0% | |
| CTTTCTGAGCATCTTGCAAT+TGG | - | chr8.4:6585614-6585633 | None:intergenic | 40.0% | |
| GAGAATAGATCAAGTGAAGC+AGG | - | chr8.4:6583040-6583059 | None:intergenic | 40.0% | |
| GAGTTTGACAATGCGAACAA+AGG | - | chr8.4:6585371-6585390 | None:intergenic | 40.0% | |
| GATAGCGACGATAACTAGAA+CGG | + | chr8.4:6583425-6583444 | MS.gene88642:CDS | 40.0% | |
| GATATGAGGCTAAAGTTGAG+AGG | + | chr8.4:6583370-6583389 | MS.gene88642:CDS | 40.0% | |
| GATGTGCATAAACAGAAGGA+AGG | + | chr8.4:6584222-6584241 | MS.gene88642:intron | 40.0% | |
| GCCACGGACAATTATCAAAA+GGG | - | chr8.4:6587056-6587075 | None:intergenic | 40.0% | |
| GGCTAATCCTATCTGAGTTT+GGG | + | chr8.4:6586483-6586502 | MS.gene88642:intron | 40.0% | |
| GTGAAAGCAGAATGAGAAGA+TGG | - | chr8.4:6582844-6582863 | None:intergenic | 40.0% | |
| TAATCCTTCACATTCTCCGA+TGG | + | chr8.4:6585309-6585328 | MS.gene88642:CDS | 40.0% | |
| TCTCATTCTGCTTTCACAAC+CGG | + | chr8.4:6582847-6582866 | MS.gene88642:CDS | 40.0% | |
| TCTCGCAATTGCAACAAGTT+AGG | + | chr8.4:6585734-6585753 | MS.gene88642:intron | 40.0% | |
| TCTTCTTCTCCATCAACACT+TGG | - | chr8.4:6584084-6584103 | None:intergenic | 40.0% | |
| TGAGAAGCTGCAAAAAGAGA+GGG | + | chr8.4:6583691-6583710 | MS.gene88642:intron | 40.0% | |
| TGATCTCTAGCCATGTGAAA+AGG | - | chr8.4:6585439-6585458 | None:intergenic | 40.0% | |
| TGATGCAAAGTCCAATTGGA+CGG | + | chr8.4:6584965-6584984 | MS.gene88642:intron | 40.0% | |
| TGGAGGAAAAACCTCATGAA+TGG | + | chr8.4:6584788-6584807 | MS.gene88642:intron | 40.0% | |
| TGGCTAATCCTATCTGAGTT+TGG | + | chr8.4:6586482-6586501 | MS.gene88642:intron | 40.0% | |
| TGTGGTAGGTTTCTATAGCA+AGG | + | chr8.4:6583155-6583174 | MS.gene88642:intron | 40.0% | |
| TTGAGAAGCTGCAAAAAGAG+AGG | + | chr8.4:6583690-6583709 | MS.gene88642:intron | 40.0% | |
| TTGTTGAGATCAATGCAGGT+GGG | + | chr8.4:6584447-6584466 | MS.gene88642:intron | 40.0% | |
| ! | AATGGTGGTTGTATGGGTTT+TGG | + | chr8.4:6584806-6584825 | MS.gene88642:intron | 40.0% |
| ! | AGTGCTGGATCATGCTAATT+TGG | + | chr8.4:6586075-6586094 | MS.gene88642:intron | 40.0% |
| ! | ATGGGAGGTTAGGATTTGTT+TGG | + | chr8.4:6586604-6586623 | MS.gene88642:intron | 40.0% |
| ! | ATTCGTGCTGCTATATGGTA+GGG | + | chr8.4:6583968-6583987 | MS.gene88642:intron | 40.0% |
| ! | TGGGAGGTTAGGATTTGTTT+GGG | + | chr8.4:6586605-6586624 | MS.gene88642:intron | 40.0% |
| ! | TTAGTAGTGGGAGATTGGTT+TGG | - | chr8.4:6585274-6585293 | None:intergenic | 40.0% |
| ! | TTGGTGGTTGCATATCTCAT+TGG | + | chr8.4:6584825-6584844 | MS.gene88642:intron | 40.0% |
| !! | AAGCTCAACTTGTTGAAGCA+AGG | + | chr8.4:6585679-6585698 | MS.gene88642:CDS | 40.0% |
| !! | AAGGAGCATTATACAAGAGC+AGG | + | chr8.4:6585698-6585717 | MS.gene88642:CDS | 40.0% |
| !! | ACCCTTTTGATAATTGTCCG+TGG | + | chr8.4:6587052-6587071 | MS.gene88642:intron | 40.0% |
| !! | AGTGTGAATTTGTTGGTGGT+TGG | + | chr8.4:6586378-6586397 | MS.gene88642:intron | 40.0% |
| !! | CTTTTGATAATTGTCCGTGG+CGG | + | chr8.4:6587055-6587074 | MS.gene88642:intron | 40.0% |
| !! | GAGACTAAACCAAGTGTTGA+TGG | + | chr8.4:6584072-6584091 | MS.gene88642:CDS | 40.0% |
| !! | GTCTGTTTCATGTTTTGGGT+TGG | + | chr8.4:6586317-6586336 | MS.gene88642:intron | 40.0% |
| !! | TTGGTGATGCAAAGTCCAAT+TGG | + | chr8.4:6584961-6584980 | MS.gene88642:intron | 40.0% |
| !! | TTTTGGGTACAATCTAGTGG+TGG | + | chr8.4:6583596-6583615 | MS.gene88642:intron | 40.0% |
| !!! | AGTTTTTTTGACAACCGCCA+CGG | - | chr8.4:6587072-6587091 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCTCTTTAGCGG+TGG | + | chr8.4:6583566-6583585 | MS.gene88642:intron | 40.0% |
| AACAACGGCCTTTACAAGGA+AGG | - | chr8.4:6585136-6585155 | None:intergenic | 45.0% | |
| AAGTCCAATTGGACGGAGAT+TGG | + | chr8.4:6584972-6584991 | MS.gene88642:intron | 45.0% | |
| ACAGGCATAAGGTGACCAAT+TGG | - | chr8.4:6587282-6587301 | None:intergenic | 45.0% | |
| ATGAAAGGTGGACGCTTATG+AGG | + | chr8.4:6584380-6584399 | MS.gene88642:intron | 45.0% | |
| CAGGCATAAGGTGACCAATT+GGG | - | chr8.4:6587281-6587300 | None:intergenic | 45.0% | |
| CATACCGTTCTTCCAACCAT+CGG | - | chr8.4:6585328-6585347 | None:intergenic | 45.0% | |
| CCATACAACCACCATTCATG+AGG | - | chr8.4:6584802-6584821 | None:intergenic | 45.0% | |
| CCTCATGAATGGTGGTTGTA+TGG | + | chr8.4:6584799-6584818 | MS.gene88642:intron | 45.0% | |
| CGCCACGGACAATTATCAAA+AGG | - | chr8.4:6587057-6587076 | None:intergenic | 45.0% | |
| CTATCAACACCACAGAGACA+CGG | - | chr8.4:6587018-6587037 | None:intergenic | 45.0% | |
| CTCATTCTGCTTTCACAACC+GGG | + | chr8.4:6582848-6582867 | MS.gene88642:CDS | 45.0% | |
| GAAAGAGGCAGAAGTCACTT+CGG | + | chr8.4:6585629-6585648 | MS.gene88642:CDS | 45.0% | |
| GAGGCAACGTGAACATGAAT+GGG | + | chr8.4:6584245-6584264 | MS.gene88642:CDS | 45.0% | |
| GAGGGATGAATTTCAGAGGA+TGG | + | chr8.4:6583709-6583728 | MS.gene88642:CDS | 45.0% | |
| GCTAAAGTTGAGAGGCTTGA+TGG | + | chr8.4:6583378-6583397 | MS.gene88642:CDS | 45.0% | |
| GGCATTGTTGAGATCAATGC+AGG | + | chr8.4:6584443-6584462 | MS.gene88642:CDS | 45.0% | |
| GTGGTTGCATATCTCATTGG+AGG | + | chr8.4:6584828-6584847 | MS.gene88642:intron | 45.0% | |
| GTGTAGTTAAATGCCGGTCA+TGG | - | chr8.4:6587111-6587130 | None:intergenic | 45.0% | |
| TAGTTAAATGCCGGTCATGG+CGG | - | chr8.4:6587108-6587127 | None:intergenic | 45.0% | |
| TCGATTACGCGCATGCAAAT+GGG | + | chr8.4:6586586-6586605 | MS.gene88642:intron | 45.0% | |
| TGCATAAACAGAAGGAAGGG+AGG | + | chr8.4:6584226-6584245 | MS.gene88642:intron | 45.0% | |
| TTCTCCGATGGTTGGAAGAA+CGG | + | chr8.4:6585321-6585340 | MS.gene88642:CDS | 45.0% | |
| ! | ATTTTACAGGGAATCGGCAC+CGG | + | chr8.4:6586266-6586285 | MS.gene88642:intron | 45.0% |
| ! | GATTCGTGCTGCTATATGGT+AGG | + | chr8.4:6583967-6583986 | MS.gene88642:intron | 45.0% |
| ! | GGAGGTTAGGATTTGTTTGG+GGG | + | chr8.4:6586607-6586626 | MS.gene88642:intron | 45.0% |
| ! | GGCTGGTACATTTTACTTGC+AGG | + | chr8.4:6584048-6584067 | MS.gene88642:intron | 45.0% |
| ! | GGGAGGTTAGGATTTGTTTG+GGG | + | chr8.4:6586606-6586625 | MS.gene88642:intron | 45.0% |
| ! | GTTGAATATGAAGGAGCGCA+TGG | + | chr8.4:6585587-6585606 | MS.gene88642:intron | 45.0% |
| ! | GTTGAGTACCCTGCTTTAGA+GGG | - | chr8.4:6585177-6585196 | None:intergenic | 45.0% |
| ! | TGGTGATTCGTGCTGCTATA+TGG | + | chr8.4:6583963-6583982 | MS.gene88642:intron | 45.0% |
| !! | ATCCACTGGCTTTCCTATTG+TGG | + | chr8.4:6586836-6586855 | MS.gene88642:intron | 45.0% |
| !! | GATCGGTGCTAAAGCAAGTT+AGG | + | chr8.4:6583843-6583862 | MS.gene88642:intron | 45.0% |
| !! | GATTGGTTTGGTAGTCCGTT+AGG | - | chr8.4:6585262-6585281 | None:intergenic | 45.0% |
| !! | GTGTCTCTGTGGTGTTGATA+GGG | + | chr8.4:6587017-6587036 | MS.gene88642:intron | 45.0% |
| !! | TCCACTGGCTTTCCTATTGT+GGG | + | chr8.4:6586837-6586856 | MS.gene88642:intron | 45.0% |
| !! | TGTCTCTGTGGTGTTGATAG+GGG | + | chr8.4:6587018-6587037 | MS.gene88642:intron | 45.0% |
| !! | TTGAGTACCCTGCTTTAGAG+GGG | - | chr8.4:6585176-6585195 | None:intergenic | 45.0% |
| !!! | GATAGGGTTTTGAACTGACC+CGG | - | chr8.4:6582869-6582888 | None:intergenic | 45.0% |
| !! | TTTATTATTATAATAATGAA+AGG | + | chr8.4:6584365-6584384 | MS.gene88642:intron | 5.0% |
| ACATCCATTTCCGCCATGAC+CGG | + | chr8.4:6587095-6587114 | MS.gene88642:intron | 50.0% | |
| ATTACGCGCATGCAAATGGG+AGG | + | chr8.4:6586589-6586608 | MS.gene88642:intron | 50.0% | |
| ATTCCTCTGCTAGCAGCAGA+AGG | + | chr8.4:6586966-6586985 | MS.gene88642:intron | 50.0% | |
| CCAACCATCGGAGAATGTGA+AGG | - | chr8.4:6585316-6585335 | None:intergenic | 50.0% | |
| CCAATTGGACGGAGATTGGA+TGG | + | chr8.4:6584976-6584995 | MS.gene88642:intron | 50.0% | |
| CCATCCAATCTCCGTCCAAT+TGG | - | chr8.4:6584979-6584998 | None:intergenic | 50.0% | |
| CCTTCACATTCTCCGATGGT+TGG | + | chr8.4:6585313-6585332 | MS.gene88642:CDS | 50.0% | |
| CGACGATAACTAGAACGGTG+AGG | + | chr8.4:6583430-6583449 | MS.gene88642:intron | 50.0% | |
| CGATGGTTGGAAGAACGGTA+TGG | + | chr8.4:6585326-6585345 | MS.gene88642:intron | 50.0% | |
| GAAAGAATCTAGGTCGGGCA+TGG | + | chr8.4:6584102-6584121 | MS.gene88642:CDS | 50.0% | |
| GACAGTACTTTGCTCAGTGC+TGG | + | chr8.4:6586060-6586079 | MS.gene88642:intron | 50.0% | |
| GGAGGCAACGTGAACATGAA+TGG | + | chr8.4:6584244-6584263 | MS.gene88642:CDS | 50.0% | |
| GGTTGAGTACCCTGCTTTAG+AGG | - | chr8.4:6585178-6585197 | None:intergenic | 50.0% | |
| GTCGATTACGCGCATGCAAA+TGG | + | chr8.4:6586585-6586604 | MS.gene88642:intron | 50.0% | |
| TCCCACAATAGGAAAGCCAG+TGG | - | chr8.4:6586841-6586860 | None:intergenic | 50.0% | |
| TCTAAGTCTCCTTCAGGGGA+AGG | - | chr8.4:6582738-6582757 | None:intergenic | 50.0% | |
| TTCCTCTGCTAGCAGCAGAA+GGG | + | chr8.4:6586967-6586986 | MS.gene88642:intron | 50.0% | |
| TTGCAAAGTCTGACAGGCCA+AGG | + | chr8.4:6586170-6586189 | MS.gene88642:CDS | 50.0% | |
| TTGTTTGGGGGTCTTACTCC+TGG | + | chr8.4:6586619-6586638 | MS.gene88642:intron | 50.0% | |
| !! | CGTGTCTCTGTGGTGTTGAT+AGG | + | chr8.4:6587016-6587035 | MS.gene88642:intron | 50.0% |
| !! | GCACTGAGCAAAGTACTGTC+AGG | - | chr8.4:6586060-6586079 | None:intergenic | 50.0% |
| !! | GGTGGTTGTATGGGTTTTGG+TGG | + | chr8.4:6584809-6584828 | MS.gene88642:intron | 50.0% |
| !! | TGAGTACCCTGCTTTAGAGG+GGG | - | chr8.4:6585175-6585194 | None:intergenic | 50.0% |
| !! | TGTTGGTGGTTGTTGCTGAC+TGG | + | chr8.4:6584880-6584899 | MS.gene88642:intron | 50.0% |
| GCGCATGCAAATGGGAGGTT+AGG | + | chr8.4:6586594-6586613 | MS.gene88642:intron | 55.0% | |
| GCTGCACCCACCAAAAGACA+TGG | - | chr8.4:6585956-6585975 | None:intergenic | 55.0% | |
| TCCTCTGCTAGCAGCAGAAG+GGG | + | chr8.4:6586968-6586987 | MS.gene88642:intron | 55.0% | |
| TGACATGGTCCGTGTCTCTG+TGG | + | chr8.4:6587006-6587025 | MS.gene88642:intron | 55.0% | |
| ! | AATGCCGGTCATGGCGGAAA+TGG | - | chr8.4:6587102-6587121 | None:intergenic | 55.0% |
| ! | GGTCATGGCGGAAATGGATG+TGG | - | chr8.4:6587096-6587115 | None:intergenic | 55.0% |
| !! | CTCTGTGGTGTTGATAGGGG+TGG | + | chr8.4:6587021-6587040 | MS.gene88642:intron | 55.0% |
| !! | GAGTACCCTGCTTTAGAGGG+GGG | - | chr8.4:6585174-6585193 | None:intergenic | 55.0% |
| ACCCCTTCTGCTGCTAGCAG+AGG | - | chr8.4:6586972-6586991 | None:intergenic | 60.0% | |
| !! | ACCCACCCCCCTCTAAAGCA+GGG | + | chr8.4:6585166-6585185 | MS.gene88642:intron | 60.0% |
| !! | ACCCTGCTTTAGAGGGGGGT+GGG | - | chr8.4:6585170-6585189 | None:intergenic | 60.0% |
| !! | GGTGTTGATAGGGGTGGTGC+TGG | + | chr8.4:6587027-6587046 | MS.gene88642:intron | 60.0% |
| !! | TACCCACCCCCCTCTAAAGC+AGG | + | chr8.4:6585165-6585184 | MS.gene88642:intron | 60.0% |
| !! | TACCCTGCTTTAGAGGGGGG+TGG | - | chr8.4:6585171-6585190 | None:intergenic | 60.0% |
| !! | CAGGGAATCGGCACCGGCTG+AGG | + | chr8.4:6586272-6586291 | MS.gene88642:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 6582732 | 6587346 | 6582732 | ID=MS.gene88642 |
| chr8.4 | mRNA | 6582732 | 6587346 | 6582732 | ID=MS.gene88642.t1;Parent=MS.gene88642 |
| chr8.4 | exon | 6582732 | 6582764 | 6582732 | ID=MS.gene88642.t1.exon1;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6582732 | 6582764 | 6582732 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6582841 | 6582869 | 6582841 | ID=MS.gene88642.t1.exon2;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6582841 | 6582869 | 6582841 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6582958 | 6583069 | 6582958 | ID=MS.gene88642.t1.exon3;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6582958 | 6583069 | 6582958 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6583163 | 6583260 | 6583163 | ID=MS.gene88642.t1.exon4;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6583163 | 6583260 | 6583163 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6583350 | 6583446 | 6583350 | ID=MS.gene88642.t1.exon5;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6583350 | 6583446 | 6583350 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6583695 | 6583754 | 6583695 | ID=MS.gene88642.t1.exon6;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6583695 | 6583754 | 6583695 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6583857 | 6583919 | 6583857 | ID=MS.gene88642.t1.exon7;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6583857 | 6583919 | 6583857 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6584070 | 6584144 | 6584070 | ID=MS.gene88642.t1.exon8;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6584070 | 6584144 | 6584070 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6584244 | 6584300 | 6584244 | ID=MS.gene88642.t1.exon9;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6584244 | 6584300 | 6584244 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6584387 | 6584464 | 6584387 | ID=MS.gene88642.t1.exon10;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6584387 | 6584464 | 6584387 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6585232 | 6585342 | 6585232 | ID=MS.gene88642.t1.exon11;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6585232 | 6585342 | 6585232 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6585421 | 6585498 | 6585421 | ID=MS.gene88642.t1.exon12;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6585421 | 6585498 | 6585421 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6585600 | 6585719 | 6585600 | ID=MS.gene88642.t1.exon13;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6585600 | 6585719 | 6585600 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6586148 | 6586191 | 6586148 | ID=MS.gene88642.t1.exon14;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6586148 | 6586191 | 6586148 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6586275 | 6586293 | 6586275 | ID=MS.gene88642.t1.exon15;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6586275 | 6586293 | 6586275 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| chr8.4 | exon | 6587332 | 6587346 | 6587332 | ID=MS.gene88642.t1.exon16;Parent=MS.gene88642.t1 |
| chr8.4 | CDS | 6587332 | 6587346 | 6587332 | ID=cds.MS.gene88642.t1;Parent=MS.gene88642.t1 |
| Gene Sequence |
| Protein sequence |
