Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88853.t1 | XP_013469571.1 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.00E+00 | 1139.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88853.t1 | Q9XIC5 | 42.8 | 593 | 268 | 17 | 4 | 567 | 1 | 551 | 2.8e-108 | 394.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88853.t1 | A0A072VNK6 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.0e+00 | 1139.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene88853.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055150 | MS.gene88853 | 0.816979 | 4.18E-52 | -1.69E-46 |
MS.gene055886 | MS.gene88853 | 0.804414 | 2.19E-49 | -1.69E-46 |
MS.gene057148 | MS.gene88853 | -0.806338 | 8.63E-50 | -1.69E-46 |
MS.gene057174 | MS.gene88853 | 0.819287 | 1.26E-52 | -1.69E-46 |
MS.gene060237 | MS.gene88853 | 0.82409 | 9.74E-54 | -1.69E-46 |
MS.gene060522 | MS.gene88853 | 0.813823 | 2.11E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88853.t1 | MTR_1g097300 | 98.249 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1178 |
MS.gene88853.t1 | MTR_1g097300 | 97.680 | 431 | 10 | 0 | 141 | 571 | 1 | 431 | 0.0 | 876 |
MS.gene88853.t1 | MTR_3g096140 | 52.261 | 199 | 90 | 1 | 13 | 211 | 1 | 194 | 1.02e-69 | 226 |
MS.gene88853.t1 | MTR_3g096140 | 52.261 | 199 | 90 | 1 | 13 | 211 | 1 | 194 | 9.94e-69 | 226 |
MS.gene88853.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 2.16e-67 | 222 |
MS.gene88853.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 4.74e-67 | 224 |
MS.gene88853.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 6.98e-67 | 224 |
MS.gene88853.t1 | MTR_8g093580 | 54.857 | 175 | 79 | 0 | 20 | 194 | 7 | 181 | 3.16e-65 | 221 |
MS.gene88853.t1 | MTR_6g477900 | 59.006 | 161 | 66 | 0 | 21 | 181 | 8 | 168 | 1.15e-60 | 201 |
MS.gene88853.t1 | MTR_5g076850 | 61.728 | 162 | 61 | 1 | 21 | 181 | 8 | 169 | 1.29e-60 | 212 |
MS.gene88853.t1 | MTR_0036s0150 | 46.154 | 247 | 119 | 5 | 21 | 254 | 7 | 252 | 1.97e-59 | 207 |
MS.gene88853.t1 | MTR_3g064580 | 60.494 | 162 | 62 | 2 | 21 | 180 | 8 | 169 | 5.26e-59 | 208 |
MS.gene88853.t1 | MTR_1g090723 | 55.882 | 170 | 74 | 1 | 21 | 189 | 10 | 179 | 1.95e-58 | 206 |
MS.gene88853.t1 | MTR_3g096140 | 51.124 | 178 | 82 | 1 | 34 | 211 | 1 | 173 | 1.99e-58 | 198 |
MS.gene88853.t1 | MTR_2g064090 | 58.065 | 155 | 64 | 1 | 17 | 170 | 4 | 158 | 6.36e-58 | 197 |
MS.gene88853.t1 | MTR_1g090723 | 55.882 | 170 | 73 | 2 | 21 | 189 | 10 | 178 | 7.10e-58 | 204 |
MS.gene88853.t1 | MTR_1g090723 | 55.882 | 170 | 73 | 2 | 21 | 189 | 10 | 178 | 1.07e-57 | 204 |
MS.gene88853.t1 | MTR_1g090720 | 56.111 | 180 | 72 | 2 | 18 | 191 | 41 | 219 | 2.71e-57 | 199 |
MS.gene88853.t1 | MTR_5g014300 | 56.410 | 156 | 58 | 2 | 21 | 169 | 8 | 160 | 8.33e-53 | 183 |
MS.gene88853.t1 | MTR_4g098630 | 55.696 | 158 | 67 | 1 | 15 | 169 | 2 | 159 | 1.65e-52 | 182 |
MS.gene88853.t1 | MTR_3g093040 | 50.898 | 167 | 77 | 2 | 9 | 170 | 93 | 259 | 7.62e-52 | 180 |
MS.gene88853.t1 | MTR_3g093050 | 52.601 | 173 | 79 | 2 | 1 | 170 | 1 | 173 | 2.03e-50 | 183 |
MS.gene88853.t1 | MTR_3g093050 | 52.601 | 173 | 79 | 2 | 1 | 170 | 1 | 173 | 4.65e-50 | 182 |
MS.gene88853.t1 | MTR_5g069030 | 49.714 | 175 | 82 | 1 | 1 | 169 | 1 | 175 | 7.09e-48 | 177 |
MS.gene88853.t1 | MTR_4g036030 | 49.333 | 150 | 73 | 2 | 21 | 169 | 9 | 156 | 3.84e-47 | 168 |
MS.gene88853.t1 | MTR_2g086880 | 56.028 | 141 | 58 | 2 | 18 | 155 | 17 | 156 | 1.69e-46 | 171 |
MS.gene88853.t1 | MTR_2g086880 | 55.782 | 147 | 60 | 3 | 13 | 155 | 11 | 156 | 3.22e-46 | 171 |
MS.gene88853.t1 | MTR_2g062730 | 47.682 | 151 | 75 | 3 | 21 | 169 | 12 | 160 | 1.00e-45 | 164 |
MS.gene88853.t1 | MTR_5g021710 | 52.672 | 131 | 61 | 1 | 21 | 150 | 10 | 140 | 1.29e-45 | 164 |
MS.gene88853.t1 | MTR_6g032770 | 42.718 | 206 | 105 | 7 | 22 | 221 | 21 | 219 | 1.74e-45 | 165 |
MS.gene88853.t1 | MTR_4g108760 | 47.853 | 163 | 81 | 2 | 15 | 175 | 13 | 173 | 2.82e-45 | 164 |
MS.gene88853.t1 | MTR_4g101680 | 46.067 | 178 | 85 | 6 | 21 | 194 | 9 | 179 | 3.92e-45 | 164 |
MS.gene88853.t1 | MTR_2g078700 | 51.266 | 158 | 69 | 4 | 21 | 173 | 25 | 179 | 3.93e-45 | 164 |
MS.gene88853.t1 | MTR_8g076110 | 47.333 | 150 | 76 | 2 | 21 | 169 | 8 | 155 | 6.10e-45 | 161 |
MS.gene88853.t1 | MTR_4g035590 | 49.333 | 150 | 72 | 2 | 21 | 169 | 10 | 156 | 1.33e-44 | 162 |
MS.gene88853.t1 | MTR_3g435150 | 49.045 | 157 | 76 | 2 | 21 | 175 | 18 | 172 | 1.35e-44 | 160 |
MS.gene88853.t1 | MTR_5g041940 | 47.134 | 157 | 77 | 2 | 17 | 169 | 1 | 155 | 1.86e-44 | 159 |
MS.gene88853.t1 | MTR_6g011860 | 50.000 | 162 | 67 | 5 | 20 | 170 | 16 | 174 | 2.07e-44 | 162 |
MS.gene88853.t1 | MTR_5g012080 | 47.682 | 151 | 76 | 3 | 21 | 169 | 9 | 158 | 2.24e-44 | 161 |
MS.gene88853.t1 | MTR_2g079990 | 45.283 | 159 | 85 | 1 | 17 | 175 | 14 | 170 | 2.63e-44 | 161 |
MS.gene88853.t1 | MTR_8g467490 | 47.024 | 168 | 72 | 5 | 15 | 170 | 12 | 174 | 3.56e-44 | 162 |
MS.gene88853.t1 | MTR_4g081870 | 46.497 | 157 | 78 | 2 | 21 | 173 | 11 | 165 | 6.70e-44 | 157 |
MS.gene88853.t1 | MTR_4g134460 | 50.327 | 153 | 71 | 3 | 20 | 171 | 55 | 203 | 7.27e-44 | 162 |
MS.gene88853.t1 | MTR_7g085220 | 46.012 | 163 | 73 | 4 | 21 | 170 | 10 | 170 | 1.21e-43 | 159 |
MS.gene88853.t1 | MTR_6g012670 | 49.367 | 158 | 74 | 4 | 21 | 175 | 22 | 176 | 1.72e-43 | 158 |
MS.gene88853.t1 | MTR_5g040420 | 45.963 | 161 | 75 | 3 | 20 | 170 | 15 | 173 | 1.92e-43 | 159 |
MS.gene88853.t1 | MTR_3g109340 | 50.955 | 157 | 71 | 3 | 21 | 175 | 24 | 176 | 2.06e-43 | 159 |
MS.gene88853.t1 | MTR_1g096430 | 48.750 | 160 | 75 | 3 | 21 | 177 | 9 | 164 | 2.27e-43 | 158 |
MS.gene88853.t1 | MTR_3g088110 | 49.351 | 154 | 72 | 3 | 21 | 171 | 9 | 159 | 2.34e-43 | 156 |
MS.gene88853.t1 | MTR_3g070030 | 38.696 | 230 | 105 | 6 | 22 | 223 | 22 | 243 | 2.93e-43 | 158 |
MS.gene88853.t1 | MTR_2g080010 | 48.980 | 147 | 71 | 2 | 6 | 150 | 2 | 146 | 6.11e-43 | 157 |
MS.gene88853.t1 | MTR_6g084430 | 48.667 | 150 | 73 | 2 | 21 | 170 | 7 | 152 | 6.92e-43 | 156 |
MS.gene88853.t1 | MTR_7g085260 | 47.771 | 157 | 72 | 4 | 21 | 170 | 19 | 172 | 1.49e-42 | 157 |
MS.gene88853.t1 | MTR_2g079990 | 51.538 | 130 | 61 | 1 | 17 | 146 | 14 | 141 | 1.64e-42 | 157 |
MS.gene88853.t1 | MTR_4g075980 | 48.387 | 155 | 70 | 4 | 19 | 170 | 15 | 162 | 2.28e-42 | 154 |
MS.gene88853.t1 | MTR_4g089135 | 53.030 | 132 | 58 | 2 | 21 | 150 | 17 | 146 | 2.33e-42 | 155 |
MS.gene88853.t1 | MTR_8g094580 | 41.414 | 198 | 109 | 4 | 21 | 214 | 9 | 203 | 2.42e-42 | 154 |
MS.gene88853.t1 | MTR_8g024480 | 49.231 | 130 | 65 | 1 | 21 | 149 | 17 | 146 | 3.07e-42 | 157 |
MS.gene88853.t1 | MTR_8g059170 | 46.795 | 156 | 79 | 3 | 17 | 170 | 12 | 165 | 4.88e-42 | 154 |
MS.gene88853.t1 | MTR_3g096920 | 48.701 | 154 | 73 | 3 | 21 | 171 | 9 | 159 | 5.39e-42 | 153 |
MS.gene88853.t1 | MTR_2157s0010 | 45.509 | 167 | 75 | 4 | 21 | 174 | 10 | 173 | 7.34e-42 | 152 |
MS.gene88853.t1 | MTR_3g109340 | 49.367 | 158 | 73 | 4 | 21 | 175 | 24 | 177 | 9.95e-42 | 154 |
MS.gene88853.t1 | MTR_3g116070 | 50.311 | 161 | 70 | 6 | 21 | 174 | 25 | 182 | 1.58e-41 | 153 |
MS.gene88853.t1 | MTR_2g093810 | 49.635 | 137 | 65 | 2 | 21 | 155 | 16 | 150 | 2.01e-41 | 152 |
MS.gene88853.t1 | MTR_3g096920 | 54.762 | 126 | 54 | 2 | 21 | 146 | 9 | 131 | 3.62e-41 | 152 |
MS.gene88853.t1 | MTR_7g005280 | 48.171 | 164 | 70 | 5 | 21 | 179 | 17 | 170 | 1.02e-40 | 148 |
MS.gene88853.t1 | MTR_1g008740 | 49.375 | 160 | 71 | 6 | 21 | 175 | 15 | 169 | 2.63e-40 | 150 |
MS.gene88853.t1 | MTR_1g008740 | 49.375 | 160 | 71 | 6 | 21 | 175 | 29 | 183 | 4.12e-40 | 150 |
MS.gene88853.t1 | MTR_7g100990 | 43.312 | 157 | 81 | 3 | 21 | 171 | 13 | 167 | 1.59e-39 | 147 |
MS.gene88853.t1 | MTR_7g011130 | 51.538 | 130 | 61 | 1 | 22 | 151 | 22 | 149 | 4.58e-39 | 146 |
MS.gene88853.t1 | MTR_7g011120 | 43.529 | 170 | 84 | 3 | 22 | 181 | 11 | 178 | 1.94e-38 | 144 |
MS.gene88853.t1 | MTR_2g068880 | 42.169 | 166 | 80 | 4 | 20 | 170 | 23 | 187 | 6.72e-38 | 142 |
MS.gene88853.t1 | MTR_5g090970 | 44.444 | 162 | 76 | 4 | 20 | 169 | 19 | 178 | 3.07e-37 | 140 |
MS.gene88853.t1 | MTR_2g068920 | 48.855 | 131 | 62 | 2 | 20 | 146 | 22 | 151 | 3.90e-37 | 139 |
MS.gene88853.t1 | MTR_5g090970 | 43.827 | 162 | 76 | 4 | 20 | 169 | 19 | 177 | 1.05e-36 | 139 |
MS.gene88853.t1 | MTR_1g069805 | 45.033 | 151 | 75 | 3 | 21 | 169 | 12 | 156 | 4.11e-36 | 136 |
MS.gene88853.t1 | MTR_2g064470 | 51.181 | 127 | 58 | 3 | 21 | 147 | 13 | 135 | 5.43e-36 | 137 |
MS.gene88853.t1 | MTR_3g070040 | 43.636 | 165 | 81 | 4 | 23 | 181 | 12 | 170 | 2.85e-35 | 135 |
MS.gene88853.t1 | MTR_8g023840 | 53.968 | 126 | 54 | 3 | 22 | 144 | 14 | 138 | 5.16e-35 | 136 |
MS.gene88853.t1 | MTR_7g097090 | 44.966 | 149 | 74 | 3 | 21 | 167 | 12 | 154 | 7.33e-35 | 133 |
MS.gene88853.t1 | MTR_8g023860 | 47.368 | 152 | 70 | 6 | 13 | 155 | 5 | 155 | 4.26e-33 | 131 |
MS.gene88853.t1 | MTR_8g023900 | 45.223 | 157 | 74 | 6 | 13 | 158 | 5 | 160 | 3.32e-32 | 130 |
MS.gene88853.t1 | MTR_8g023900 | 42.857 | 147 | 75 | 5 | 22 | 160 | 196 | 341 | 1.38e-28 | 119 |
MS.gene88853.t1 | MTR_8g099750 | 47.656 | 128 | 61 | 2 | 21 | 146 | 16 | 139 | 2.88e-31 | 121 |
MS.gene88853.t1 | MTR_3g098810 | 40.719 | 167 | 85 | 3 | 21 | 177 | 16 | 178 | 4.94e-31 | 121 |
MS.gene88853.t1 | MTR_7g105170 | 42.236 | 161 | 81 | 6 | 21 | 170 | 6 | 165 | 4.45e-30 | 119 |
MS.gene88853.t1 | MTR_3g098810 | 43.421 | 152 | 77 | 3 | 21 | 167 | 16 | 163 | 4.76e-30 | 116 |
MS.gene88853.t1 | MTR_8g023930 | 42.759 | 145 | 74 | 5 | 22 | 158 | 27 | 170 | 1.45e-27 | 116 |
MS.gene88853.t1 | MTR_2g086690 | 39.752 | 161 | 89 | 5 | 19 | 171 | 4 | 164 | 2.12e-27 | 111 |
MS.gene88853.t1 | MTR_4g052620 | 44.961 | 129 | 65 | 4 | 21 | 144 | 7 | 134 | 3.41e-25 | 105 |
MS.gene88853.t1 | MTR_8g094580 | 37.671 | 146 | 86 | 3 | 73 | 214 | 5 | 149 | 1.21e-24 | 103 |
MS.gene88853.t1 | MTR_8g023880 | 39.394 | 165 | 76 | 7 | 15 | 158 | 2 | 163 | 7.28e-24 | 101 |
MS.gene88853.t1 | MTR_4g094302 | 39.062 | 128 | 66 | 4 | 21 | 146 | 13 | 130 | 1.05e-22 | 95.1 |
MS.gene88853.t1 | MTR_4g094302 | 39.062 | 128 | 66 | 4 | 21 | 146 | 13 | 130 | 1.98e-22 | 95.5 |
MS.gene88853.t1 | MTR_7g070140 | 47.368 | 76 | 38 | 1 | 74 | 147 | 17 | 92 | 1.47e-18 | 82.8 |
MS.gene88853.t1 | MTR_7g083330 | 31.361 | 169 | 106 | 5 | 3 | 168 | 2 | 163 | 3.43e-16 | 77.8 |
MS.gene88853.t1 | MTR_7g083360 | 31.746 | 126 | 82 | 3 | 22 | 146 | 13 | 135 | 8.77e-16 | 75.5 |
MS.gene88853.t1 | MTR_7g083370 | 29.231 | 130 | 88 | 3 | 22 | 150 | 13 | 139 | 1.30e-11 | 63.2 |
MS.gene88853.t1 | MTR_1g087190 | 58.696 | 46 | 18 | 1 | 21 | 65 | 7 | 52 | 2.46e-11 | 59.3 |
MS.gene88853.t1 | MTR_8g093790 | 33.333 | 126 | 66 | 5 | 21 | 146 | 12 | 119 | 4.18e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88853.t1 | AT1G34190 | 43.121 | 596 | 266 | 19 | 4 | 569 | 1 | 553 | 7.45e-139 | 414 |
MS.gene88853.t1 | AT1G34180 | 41.356 | 590 | 286 | 19 | 6 | 567 | 3 | 560 | 3.03e-125 | 380 |
MS.gene88853.t1 | AT1G34180 | 40.532 | 602 | 286 | 20 | 6 | 567 | 3 | 572 | 1.30e-121 | 370 |
MS.gene88853.t1 | AT1G34180 | 47.354 | 378 | 161 | 10 | 6 | 370 | 3 | 355 | 4.63e-99 | 308 |
MS.gene88853.t1 | AT1G34180 | 45.897 | 390 | 161 | 11 | 6 | 370 | 3 | 367 | 1.26e-95 | 300 |
MS.gene88853.t1 | AT1G32870 | 37.655 | 563 | 285 | 16 | 21 | 567 | 12 | 524 | 6.19e-86 | 276 |
MS.gene88853.t1 | AT1G32870 | 37.655 | 563 | 285 | 16 | 21 | 567 | 48 | 560 | 2.66e-85 | 276 |
MS.gene88853.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene88853.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene88853.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene88853.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene88853.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene88853.t1 | AT1G32870 | 59.829 | 234 | 86 | 5 | 21 | 249 | 12 | 242 | 2.10e-70 | 236 |
MS.gene88853.t1 | AT1G32870 | 27.444 | 266 | 161 | 7 | 330 | 567 | 257 | 518 | 5.11e-13 | 72.0 |
MS.gene88853.t1 | AT5G04410 | 58.333 | 180 | 75 | 0 | 16 | 195 | 6 | 185 | 2.63e-69 | 234 |
MS.gene88853.t1 | AT5G64060 | 54.971 | 171 | 77 | 0 | 21 | 191 | 8 | 178 | 3.42e-66 | 219 |
MS.gene88853.t1 | AT3G10500 | 59.763 | 169 | 68 | 0 | 16 | 184 | 6 | 174 | 6.81e-65 | 221 |
MS.gene88853.t1 | AT3G10480 | 45.560 | 259 | 131 | 5 | 1 | 250 | 6 | 263 | 1.18e-62 | 213 |
MS.gene88853.t1 | AT3G10490 | 55.026 | 189 | 82 | 3 | 7 | 193 | 14 | 201 | 1.23e-61 | 204 |
MS.gene88853.t1 | AT3G10480 | 45.385 | 260 | 131 | 6 | 1 | 250 | 6 | 264 | 2.08e-61 | 209 |
MS.gene88853.t1 | AT1G65910 | 60.366 | 164 | 65 | 0 | 17 | 180 | 4 | 167 | 2.38e-61 | 214 |
MS.gene88853.t1 | AT3G17730 | 61.589 | 151 | 58 | 0 | 21 | 171 | 8 | 158 | 5.48e-61 | 202 |
MS.gene88853.t1 | AT3G10490 | 48.291 | 234 | 112 | 4 | 7 | 238 | 14 | 240 | 5.78e-61 | 209 |
MS.gene88853.t1 | AT5G17260 | 60.000 | 150 | 59 | 1 | 21 | 169 | 8 | 157 | 6.98e-58 | 201 |
MS.gene88853.t1 | AT3G03200 | 60.667 | 150 | 58 | 1 | 21 | 169 | 8 | 157 | 2.85e-57 | 199 |
MS.gene88853.t1 | AT3G10480 | 43.580 | 257 | 104 | 5 | 1 | 217 | 6 | 261 | 9.54e-56 | 196 |
MS.gene88853.t1 | AT1G54330 | 56.604 | 159 | 66 | 1 | 17 | 175 | 4 | 159 | 1.47e-52 | 182 |
MS.gene88853.t1 | AT1G33060 | 56.494 | 154 | 66 | 1 | 17 | 169 | 21 | 174 | 2.50e-51 | 187 |
MS.gene88853.t1 | AT1G33060 | 56.494 | 154 | 66 | 1 | 17 | 169 | 21 | 174 | 2.97e-51 | 187 |
MS.gene88853.t1 | AT5G46590 | 53.289 | 152 | 69 | 2 | 21 | 170 | 8 | 159 | 4.60e-51 | 177 |
MS.gene88853.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.09e-50 | 182 |
MS.gene88853.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.11e-50 | 183 |
MS.gene88853.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.11e-50 | 183 |
MS.gene88853.t1 | AT1G32510 | 54.430 | 158 | 64 | 2 | 21 | 170 | 8 | 165 | 2.44e-50 | 175 |
MS.gene88853.t1 | AT4G17980 | 55.556 | 153 | 64 | 2 | 21 | 169 | 8 | 160 | 4.53e-50 | 174 |
MS.gene88853.t1 | AT5G46590 | 55.319 | 141 | 61 | 2 | 21 | 159 | 8 | 148 | 5.68e-50 | 174 |
MS.gene88853.t1 | AT4G17980 | 55.195 | 154 | 65 | 2 | 21 | 170 | 8 | 161 | 1.08e-49 | 174 |
MS.gene88853.t1 | AT3G49530 | 45.274 | 201 | 98 | 3 | 17 | 215 | 10 | 200 | 1.82e-48 | 174 |
MS.gene88853.t1 | AT5G24590 | 53.548 | 155 | 70 | 2 | 17 | 169 | 10 | 164 | 2.24e-48 | 174 |
MS.gene88853.t1 | AT2G27300 | 53.289 | 152 | 67 | 2 | 7 | 155 | 2 | 152 | 4.72e-48 | 171 |
MS.gene88853.t1 | AT3G49530 | 45.274 | 201 | 98 | 3 | 17 | 215 | 10 | 200 | 5.56e-48 | 174 |
MS.gene88853.t1 | AT1G62700 | 44.134 | 179 | 89 | 5 | 21 | 194 | 9 | 181 | 1.05e-47 | 171 |
MS.gene88853.t1 | AT1G62700 | 44.134 | 179 | 89 | 5 | 21 | 194 | 9 | 181 | 1.05e-47 | 171 |
MS.gene88853.t1 | AT3G44290 | 52.448 | 143 | 64 | 2 | 16 | 155 | 11 | 152 | 1.34e-47 | 166 |
MS.gene88853.t1 | AT5G22290 | 49.045 | 157 | 75 | 2 | 3 | 155 | 5 | 160 | 4.29e-47 | 168 |
MS.gene88853.t1 | AT2G18060 | 44.211 | 190 | 97 | 4 | 15 | 202 | 5 | 187 | 5.08e-47 | 169 |
MS.gene88853.t1 | AT2G18060 | 44.211 | 190 | 97 | 4 | 15 | 202 | 5 | 187 | 5.08e-47 | 169 |
MS.gene88853.t1 | AT3G44290 | 52.448 | 143 | 64 | 2 | 16 | 155 | 11 | 152 | 5.95e-47 | 167 |
MS.gene88853.t1 | AT4G36160 | 49.669 | 151 | 70 | 2 | 1 | 150 | 1 | 146 | 7.54e-47 | 169 |
MS.gene88853.t1 | AT1G33280 | 50.667 | 150 | 70 | 2 | 21 | 169 | 10 | 156 | 2.78e-46 | 165 |
MS.gene88853.t1 | AT1G12260 | 48.684 | 152 | 71 | 3 | 21 | 169 | 9 | 156 | 2.91e-46 | 166 |
MS.gene88853.t1 | AT1G12260 | 44.068 | 177 | 90 | 4 | 21 | 194 | 9 | 179 | 3.21e-46 | 167 |
MS.gene88853.t1 | AT4G36160 | 53.435 | 131 | 60 | 1 | 21 | 150 | 12 | 142 | 3.48e-46 | 167 |
MS.gene88853.t1 | AT4G36160 | 53.435 | 131 | 60 | 1 | 21 | 150 | 12 | 142 | 3.48e-46 | 167 |
MS.gene88853.t1 | AT1G69490 | 45.312 | 192 | 96 | 5 | 21 | 208 | 11 | 197 | 5.59e-46 | 163 |
MS.gene88853.t1 | AT5G66300 | 46.951 | 164 | 85 | 2 | 21 | 183 | 14 | 176 | 7.18e-46 | 163 |
MS.gene88853.t1 | AT4G27410 | 47.403 | 154 | 79 | 1 | 17 | 170 | 12 | 163 | 7.95e-46 | 163 |
MS.gene88853.t1 | AT5G07680 | 47.853 | 163 | 81 | 2 | 15 | 175 | 13 | 173 | 9.97e-46 | 164 |
MS.gene88853.t1 | AT4G10350 | 48.667 | 150 | 76 | 1 | 21 | 169 | 11 | 160 | 1.38e-45 | 164 |
MS.gene88853.t1 | AT5G07680 | 47.826 | 161 | 80 | 2 | 17 | 175 | 1 | 159 | 1.64e-45 | 163 |
MS.gene88853.t1 | AT5G61430 | 47.853 | 163 | 81 | 2 | 15 | 175 | 12 | 172 | 1.94e-45 | 164 |
MS.gene88853.t1 | AT5G39820 | 51.049 | 143 | 64 | 3 | 6 | 146 | 9 | 147 | 8.04e-45 | 162 |
MS.gene88853.t1 | AT1G01720 | 44.865 | 185 | 89 | 5 | 13 | 188 | 1 | 181 | 8.26e-45 | 160 |
MS.gene88853.t1 | AT5G39610 | 50.000 | 160 | 70 | 3 | 21 | 175 | 22 | 176 | 1.17e-44 | 160 |
MS.gene88853.t1 | AT5G62380 | 53.435 | 131 | 60 | 1 | 21 | 150 | 9 | 139 | 1.26e-44 | 162 |
MS.gene88853.t1 | AT5G62380 | 53.435 | 131 | 60 | 1 | 21 | 150 | 9 | 139 | 1.26e-44 | 162 |
MS.gene88853.t1 | AT1G71930 | 44.444 | 180 | 85 | 5 | 16 | 191 | 5 | 173 | 1.37e-44 | 161 |
MS.gene88853.t1 | AT1G71930 | 44.444 | 180 | 85 | 5 | 16 | 191 | 5 | 173 | 1.37e-44 | 161 |
MS.gene88853.t1 | AT3G15500 | 47.059 | 153 | 79 | 1 | 17 | 169 | 12 | 162 | 3.20e-44 | 160 |
MS.gene88853.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene88853.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene88853.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene88853.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene88853.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene88853.t1 | AT3G29035 | 46.552 | 174 | 85 | 3 | 14 | 183 | 19 | 188 | 1.03e-43 | 158 |
MS.gene88853.t1 | AT3G04060 | 48.780 | 164 | 73 | 4 | 15 | 172 | 16 | 174 | 1.15e-43 | 159 |
MS.gene88853.t1 | AT5G18270 | 40.000 | 215 | 107 | 6 | 15 | 225 | 17 | 213 | 1.66e-43 | 158 |
MS.gene88853.t1 | AT5G18270 | 40.000 | 215 | 107 | 6 | 15 | 225 | 17 | 213 | 1.85e-43 | 158 |
MS.gene88853.t1 | AT2G17040 | 50.649 | 154 | 66 | 4 | 20 | 170 | 7 | 153 | 1.91e-43 | 156 |
MS.gene88853.t1 | AT1G52890 | 45.283 | 159 | 85 | 1 | 17 | 175 | 12 | 168 | 3.51e-43 | 157 |
MS.gene88853.t1 | AT4G27410 | 43.787 | 169 | 80 | 1 | 17 | 170 | 12 | 180 | 5.64e-43 | 156 |
MS.gene88853.t1 | AT2G02450 | 48.366 | 153 | 74 | 3 | 20 | 171 | 52 | 200 | 8.71e-43 | 157 |
MS.gene88853.t1 | AT2G24430 | 50.327 | 153 | 69 | 4 | 21 | 170 | 18 | 166 | 9.28e-43 | 155 |
MS.gene88853.t1 | AT2G24430 | 50.327 | 153 | 69 | 4 | 21 | 170 | 18 | 166 | 9.28e-43 | 155 |
MS.gene88853.t1 | AT1G77450 | 48.052 | 154 | 74 | 3 | 21 | 171 | 12 | 162 | 1.09e-42 | 154 |
MS.gene88853.t1 | AT2G02450 | 48.366 | 153 | 74 | 3 | 20 | 171 | 52 | 200 | 1.15e-42 | 158 |
MS.gene88853.t1 | AT3G18400 | 46.452 | 155 | 80 | 2 | 21 | 175 | 7 | 158 | 1.44e-42 | 155 |
MS.gene88853.t1 | AT2G43000 | 47.059 | 153 | 78 | 2 | 18 | 169 | 17 | 167 | 1.48e-42 | 154 |
MS.gene88853.t1 | AT1G61110 | 52.857 | 140 | 63 | 2 | 21 | 159 | 18 | 155 | 1.49e-42 | 155 |
MS.gene88853.t1 | AT2G46770 | 46.667 | 150 | 76 | 2 | 1 | 149 | 1 | 147 | 1.52e-42 | 156 |
MS.gene88853.t1 | AT3G61910 | 49.275 | 138 | 68 | 2 | 21 | 156 | 13 | 150 | 2.13e-42 | 155 |
MS.gene88853.t1 | AT1G76420 | 50.968 | 155 | 67 | 4 | 21 | 171 | 24 | 173 | 2.72e-42 | 155 |
MS.gene88853.t1 | AT3G15170 | 51.282 | 156 | 68 | 4 | 21 | 171 | 22 | 174 | 3.49e-42 | 154 |
MS.gene88853.t1 | AT1G32770 | 50.388 | 129 | 63 | 1 | 21 | 148 | 18 | 146 | 3.57e-42 | 155 |
MS.gene88853.t1 | AT1G26870 | 46.626 | 163 | 72 | 4 | 20 | 170 | 17 | 176 | 4.04e-42 | 157 |
MS.gene88853.t1 | AT5G63790 | 46.452 | 155 | 75 | 3 | 22 | 171 | 53 | 204 | 5.62e-42 | 154 |
MS.gene88853.t1 | AT5G63790 | 46.452 | 155 | 75 | 3 | 22 | 171 | 63 | 214 | 8.10e-42 | 153 |
MS.gene88853.t1 | AT5G53950 | 50.641 | 156 | 67 | 5 | 21 | 170 | 19 | 170 | 1.04e-41 | 154 |
MS.gene88853.t1 | AT5G08790 | 47.097 | 155 | 74 | 3 | 22 | 171 | 10 | 161 | 1.36e-41 | 152 |
MS.gene88853.t1 | AT5G13180 | 47.853 | 163 | 77 | 3 | 16 | 176 | 11 | 167 | 3.69e-41 | 149 |
MS.gene88853.t1 | AT3G04070 | 42.593 | 162 | 79 | 4 | 21 | 170 | 12 | 171 | 4.00e-41 | 152 |
MS.gene88853.t1 | AT3G15510 | 38.571 | 210 | 104 | 4 | 23 | 219 | 21 | 218 | 7.02e-41 | 152 |
MS.gene88853.t1 | AT3G04070 | 48.092 | 131 | 61 | 2 | 21 | 146 | 12 | 140 | 2.21e-40 | 150 |
MS.gene88853.t1 | AT2G33480 | 48.701 | 154 | 74 | 1 | 16 | 169 | 12 | 160 | 1.48e-39 | 145 |
MS.gene88853.t1 | AT2G33480 | 48.701 | 154 | 72 | 2 | 16 | 169 | 12 | 158 | 2.92e-39 | 145 |
MS.gene88853.t1 | AT3G12977 | 44.156 | 154 | 83 | 2 | 21 | 173 | 20 | 171 | 6.60e-38 | 141 |
MS.gene88853.t1 | AT1G56010 | 41.765 | 170 | 93 | 3 | 21 | 186 | 21 | 188 | 3.73e-37 | 140 |
MS.gene88853.t1 | AT5G04395 | 42.683 | 164 | 79 | 3 | 2 | 150 | 10 | 173 | 5.08e-35 | 130 |
MS.gene88853.t1 | AT1G52880 | 46.250 | 160 | 72 | 3 | 23 | 170 | 21 | 178 | 7.16e-35 | 134 |
MS.gene88853.t1 | AT3G12910 | 48.485 | 132 | 60 | 3 | 20 | 146 | 22 | 150 | 6.80e-34 | 131 |
MS.gene88853.t1 | AT4G28530 | 42.604 | 169 | 69 | 6 | 21 | 169 | 12 | 172 | 1.01e-31 | 126 |
MS.gene88853.t1 | AT5G61430 | 50.467 | 107 | 51 | 1 | 71 | 175 | 3 | 109 | 1.19e-30 | 121 |
MS.gene88853.t1 | AT3G44350 | 39.355 | 155 | 89 | 5 | 22 | 171 | 8 | 162 | 1.65e-28 | 114 |
MS.gene88853.t1 | AT4G01550 | 38.857 | 175 | 94 | 5 | 16 | 183 | 1 | 169 | 1.76e-28 | 119 |
MS.gene88853.t1 | AT5G22380 | 40.764 | 157 | 86 | 6 | 22 | 171 | 8 | 164 | 6.14e-28 | 112 |
MS.gene88853.t1 | AT3G44350 | 40.523 | 153 | 86 | 5 | 22 | 169 | 8 | 160 | 1.01e-27 | 109 |
MS.gene88853.t1 | AT3G10490 | 45.205 | 146 | 72 | 3 | 94 | 238 | 2 | 140 | 1.23e-27 | 114 |
MS.gene88853.t1 | AT3G10490 | 45.205 | 146 | 72 | 3 | 94 | 238 | 2 | 140 | 1.23e-27 | 114 |
MS.gene88853.t1 | AT4G10350 | 45.918 | 98 | 53 | 0 | 72 | 169 | 16 | 113 | 8.64e-27 | 110 |
MS.gene88853.t1 | AT1G56010 | 44.444 | 117 | 62 | 1 | 73 | 186 | 5 | 121 | 1.09e-26 | 109 |
MS.gene88853.t1 | AT3G04420 | 40.800 | 125 | 72 | 1 | 22 | 144 | 6 | 130 | 2.96e-26 | 109 |
MS.gene88853.t1 | AT3G12977 | 46.154 | 104 | 55 | 1 | 71 | 173 | 15 | 118 | 4.15e-26 | 107 |
MS.gene88853.t1 | AT3G04420 | 40.800 | 125 | 72 | 1 | 22 | 144 | 6 | 130 | 1.07e-25 | 108 |
MS.gene88853.t1 | AT4G01520 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 1.18e-24 | 105 |
MS.gene88853.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 1.99e-24 | 106 |
MS.gene88853.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.09e-24 | 106 |
MS.gene88853.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.74e-24 | 106 |
MS.gene88853.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.89e-24 | 105 |
MS.gene88853.t1 | AT5G64530 | 39.552 | 134 | 65 | 5 | 17 | 148 | 1 | 120 | 6.73e-23 | 95.9 |
MS.gene88853.t1 | AT5G64530 | 40.152 | 132 | 63 | 5 | 17 | 146 | 1 | 118 | 4.04e-22 | 94.7 |
MS.gene88853.t1 | AT1G02230 | 40.625 | 128 | 68 | 3 | 22 | 144 | 6 | 130 | 1.06e-21 | 97.4 |
MS.gene88853.t1 | AT1G02250 | 38.346 | 133 | 74 | 3 | 17 | 144 | 1 | 130 | 2.56e-21 | 96.3 |
MS.gene88853.t1 | AT2G33480 | 46.000 | 100 | 52 | 1 | 72 | 169 | 4 | 103 | 3.78e-21 | 92.4 |
MS.gene88853.t1 | AT1G02220 | 37.692 | 130 | 76 | 2 | 17 | 144 | 1 | 127 | 7.12e-20 | 92.4 |
MS.gene88853.t1 | AT4G28530 | 45.370 | 108 | 41 | 3 | 21 | 112 | 12 | 117 | 3.02e-19 | 89.4 |
MS.gene88853.t1 | AT1G01010 | 37.589 | 141 | 76 | 3 | 17 | 147 | 1 | 139 | 9.32e-18 | 86.3 |
MS.gene88853.t1 | AT5G14000 | 32.283 | 127 | 80 | 2 | 22 | 146 | 18 | 140 | 4.54e-17 | 79.0 |
MS.gene88853.t1 | AT5G22290 | 56.667 | 60 | 22 | 1 | 100 | 155 | 2 | 61 | 7.11e-17 | 80.9 |
MS.gene88853.t1 | AT2G18060 | 39.583 | 96 | 55 | 2 | 100 | 194 | 3 | 96 | 3.86e-16 | 79.3 |
MS.gene88853.t1 | AT3G56530 | 31.544 | 149 | 97 | 4 | 21 | 167 | 54 | 199 | 5.52e-16 | 79.7 |
MS.gene88853.t1 | AT5G14000 | 30.263 | 152 | 97 | 3 | 22 | 171 | 18 | 162 | 5.79e-16 | 77.4 |
MS.gene88853.t1 | AT2G43000 | 42.045 | 88 | 50 | 1 | 83 | 169 | 2 | 89 | 2.44e-15 | 75.5 |
MS.gene88853.t1 | AT3G55210 | 30.000 | 160 | 94 | 4 | 21 | 167 | 13 | 167 | 4.88e-15 | 76.3 |
MS.gene88853.t1 | AT1G28470 | 34.659 | 176 | 85 | 11 | 17 | 172 | 74 | 239 | 1.01e-11 | 66.6 |
Find 127 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGGAAATTTAAGACTATT+AGG | 0.168141 | 1.1:-70061897 | MS.gene88853:CDS |
GCCCATTCTTCTTCTTTAAA+TGG | 0.196298 | 1.1:+70063709 | None:intergenic |
ACAGTTTGATTTGCGTCTTC+TGG | 0.203030 | 1.1:+70062655 | None:intergenic |
CCATACTGTTCACCGTTCTT+AGG | 0.238231 | 1.1:+70063736 | None:intergenic |
GAAATTGATGAAATCATTAA+AGG | 0.241716 | 1.1:-70063577 | MS.gene88853:CDS |
GATCGAGATGGGTGCGGTTT+CGG | 0.256333 | 1.1:-70065243 | None:intergenic |
ATCAAACTGTTGATGAATTC+TGG | 0.264215 | 1.1:-70062642 | MS.gene88853:CDS |
CTGAAAATCCCTTGGTAAAT+CGG | 0.287533 | 1.1:-70062088 | MS.gene88853:CDS |
GCTTTCTTGTGGGTTTCTAT+TGG | 0.323704 | 1.1:-70061915 | MS.gene88853:CDS |
GAACAATCTTTCCTGAAAAC+TGG | 0.333240 | 1.1:-70064178 | MS.gene88853:CDS |
TCCTCCCCGCTTTGAATGTT+CGG | 0.334586 | 1.1:+70062940 | None:intergenic |
TGCTTTATGTGCTTTCTTGT+GGG | 0.339931 | 1.1:-70061925 | MS.gene88853:CDS |
TTGGAAATTTAAGACTATTA+GGG | 0.350725 | 1.1:-70061896 | MS.gene88853:CDS |
TGATGAAGAAACACGAAATA+TGG | 0.352461 | 1.1:-70063121 | MS.gene88853:CDS |
GAGATGTTTCTTTGTGGCCT+GGG | 0.356280 | 1.1:-70062766 | MS.gene88853:CDS |
GCACATAAAGCAATAAGAAT+CGG | 0.388701 | 1.1:+70061936 | None:intergenic |
CACTCAACACATCTTCAAAC+TGG | 0.409957 | 1.1:+70062812 | None:intergenic |
TAAGACATGCCGTGATGTTA+AGG | 0.415877 | 1.1:-70063921 | MS.gene88853:intron |
ATCTGAAAAGGAAGATTTGT+GGG | 0.421125 | 1.1:-70065130 | MS.gene88853:CDS |
TTGATTTGCGTCTTCTGGAT+TGG | 0.421770 | 1.1:+70062660 | None:intergenic |
AGAGATGTTTCTTTGTGGCC+TGG | 0.424888 | 1.1:-70062767 | MS.gene88853:CDS |
GAAATGTGATATACAATTCT+CGG | 0.433492 | 1.1:-70064048 | MS.gene88853:CDS |
ATGAAGAGAGCAGGCAGAAA+GGG | 0.435247 | 1.1:-70061978 | MS.gene88853:CDS |
GTTGAAGTTCAACGTTATCA+AGG | 0.436333 | 1.1:-70065102 | MS.gene88853:CDS |
TTGCTTTATGTGCTTTCTTG+TGG | 0.443767 | 1.1:-70061926 | MS.gene88853:CDS |
CCTAAGAACGGTGAACAGTA+TGG | 0.447178 | 1.1:-70063736 | MS.gene88853:CDS |
CTTCTGGATTGGACAACAAC+TGG | 0.447857 | 1.1:+70062671 | None:intergenic |
CAATAAGAATCGGGAAGAAA+AGG | 0.454768 | 1.1:+70061946 | None:intergenic |
CACCATTTAAAGAAGAAGAA+TGG | 0.455058 | 1.1:-70063711 | MS.gene88853:CDS |
TGTATTTGAAAATGTAGATT+CGG | 0.456852 | 1.1:+70062867 | None:intergenic |
GATGCAGAGATGTTTCTTTG+TGG | 0.460432 | 1.1:-70062772 | MS.gene88853:CDS |
CACATAAAGCAATAAGAATC+GGG | 0.470798 | 1.1:+70061937 | None:intergenic |
AAATTGATGAAATCATTAAA+GGG | 0.472368 | 1.1:-70063576 | MS.gene88853:CDS |
TTAATGTAAATTCAGTTGAC+CGG | 0.472399 | 1.1:-70063666 | MS.gene88853:CDS |
TAGTGGTGAGCGAACTGATT+GGG | 0.473263 | 1.1:-70063978 | MS.gene88853:CDS |
GAGGTGATGTCGTCGATGCC+AGG | 0.473742 | 1.1:-70065194 | MS.gene88853:CDS |
TGAAAATCCCTTGGTAAATC+GGG | 0.476781 | 1.1:-70062087 | MS.gene88853:CDS |
TGGTTATGTTGACTTTCCTC+AGG | 0.478965 | 1.1:-70063512 | MS.gene88853:intron |
ACCATTTAAAGAAGAAGAAT+GGG | 0.480249 | 1.1:-70063710 | MS.gene88853:CDS |
TCTTTCTCTCTAACAAATCC+AGG | 0.483310 | 1.1:-70062571 | MS.gene88853:intron |
TGGTGATGTATTATCTGAAA+AGG | 0.485179 | 1.1:-70065142 | MS.gene88853:CDS |
AAAGAAACATCTCTGCATCT+TGG | 0.490156 | 1.1:+70062776 | None:intergenic |
GGACTATTATGCACTTTACA+AGG | 0.492066 | 1.1:-70063782 | MS.gene88853:CDS |
CGACTAGACCTTCCACCGTT+AGG | 0.494968 | 1.1:+70064112 | None:intergenic |
ATCGAATGTCTAGCTTCAGC+AGG | 0.496594 | 1.1:-70062058 | MS.gene88853:CDS |
ATCACCAACTCCTCATCTGT+TGG | 0.497258 | 1.1:+70065158 | None:intergenic |
CATGGCTACTGGAAAGCTAC+TGG | 0.501589 | 1.1:-70064079 | MS.gene88853:CDS |
TTGATGATTGAAGTCAAAGC+TGG | 0.501672 | 1.1:+70063014 | None:intergenic |
ACCTGCAGCAATGTTGTTGT+CGG | 0.505799 | 1.1:+70062019 | None:intergenic |
TATCTGAAAAGGAAGATTTG+TGG | 0.507777 | 1.1:-70065131 | MS.gene88853:CDS |
ACATTGTCAACAGCAGCCTC+TGG | 0.508902 | 1.1:+70063637 | None:intergenic |
CAAATACCAGGTAAATCCTC+AGG | 0.509072 | 1.1:+70065056 | None:intergenic |
AACATCTCTGCATCTTGGTA+AGG | 0.509554 | 1.1:+70062781 | None:intergenic |
AGGAAACTGATGTGTACAAG+TGG | 0.511941 | 1.1:-70065082 | MS.gene88853:CDS |
TTCGGAGTGGAAGTGACCTC+AGG | 0.519504 | 1.1:+70062958 | None:intergenic |
TAGATTCTCCTCAGCTCTGT+GGG | 0.520308 | 1.1:-70062150 | MS.gene88853:CDS |
TGCAGCAATGTTGTTGTCGG+TGG | 0.520896 | 1.1:+70062022 | None:intergenic |
CATAACCATTCACATGTTGC+TGG | 0.521973 | 1.1:+70063527 | None:intergenic |
GAGCAACTAGACATGGCTAC+TGG | 0.524027 | 1.1:-70064090 | MS.gene88853:CDS |
CAATCAGTTCGCTCACCACT+AGG | 0.525126 | 1.1:+70063980 | None:intergenic |
AGATGTTTCTTTGTGGCCTG+GGG | 0.525648 | 1.1:-70062765 | MS.gene88853:CDS |
CTTTCCTGAAAACTGGAGAC+AGG | 0.526319 | 1.1:-70064171 | MS.gene88853:CDS |
ATAACCTTCAGCTGGACTGC+GGG | 0.526602 | 1.1:+70062600 | None:intergenic |
GTTGGATGAAAGCGAAAACC+TGG | 0.526637 | 1.1:+70065176 | None:intergenic |
ACATGTTGCTGGTCAAGGAC+AGG | 0.530141 | 1.1:+70063538 | None:intergenic |
CTAGTGGTGAGCGAACTGAT+TGG | 0.530398 | 1.1:-70063979 | MS.gene88853:CDS |
GAACCATCATAACCTTCAGC+TGG | 0.532336 | 1.1:+70062592 | None:intergenic |
TCATCCAACAGATGAGGAGT+TGG | 0.537248 | 1.1:-70065162 | MS.gene88853:CDS |
ACTTGGATCAGGGAATATCA+TGG | 0.537254 | 1.1:+70063077 | None:intergenic |
CCACTCCGAACATTCAAAGC+GGG | 0.539242 | 1.1:-70062945 | MS.gene88853:CDS |
TCTTCTGATCGAGATGGGTG+CGG | 0.539716 | 1.1:-70065249 | None:intergenic |
GGTGTTGTGTGTGACTCTGT+CGG | 0.542109 | 1.1:-70062230 | MS.gene88853:CDS |
ATCAGCTGCTGAAAATCCCT+TGG | 0.543692 | 1.1:-70062096 | MS.gene88853:CDS |
TATGAAGAGAGCAGGCAGAA+AGG | 0.544360 | 1.1:-70061979 | MS.gene88853:CDS |
ATATACAATTCTCGGTCAGT+TGG | 0.550050 | 1.1:-70064040 | MS.gene88853:CDS |
CATGCATATATGAATAGCAC+TGG | 0.554571 | 1.1:-70062718 | MS.gene88853:CDS |
CTTAAGCTCATCTTCATCCA+TGG | 0.555126 | 1.1:+70063940 | None:intergenic |
ACCGACAACAACATTGCTGC+AGG | 0.564654 | 1.1:-70062020 | MS.gene88853:CDS |
TTTCTTCGTTAATAGACCCC+AGG | 0.566378 | 1.1:+70062749 | None:intergenic |
GCAGCTGATGCAGGAGTGGT+AGG | 0.567625 | 1.1:+70062110 | None:intergenic |
CATTCACATGTTGCTGGTCA+AGG | 0.569092 | 1.1:+70063533 | None:intergenic |
AGTCCAGCTGAAGGTTATGA+TGG | 0.570391 | 1.1:-70062595 | MS.gene88853:CDS |
GGTCATGGATCAATTCTATG+AGG | 0.570510 | 1.1:-70063100 | MS.gene88853:CDS |
TTCAGCAGCTGATGCAGGAG+TGG | 0.571280 | 1.1:+70062106 | None:intergenic |
CTTGACCAGCAACATGTGAA+TGG | 0.574283 | 1.1:-70063532 | MS.gene88853:CDS |
GTGTATTTCTGAAGCACCTG+AGG | 0.574286 | 1.1:-70062974 | MS.gene88853:CDS |
GGAAGTATCCTAACGGTGGA+AGG | 0.576876 | 1.1:-70064120 | MS.gene88853:CDS |
TGTTCACCGTTCTTAGGACC+CGG | 0.583775 | 1.1:+70063742 | None:intergenic |
GCAGCAATGTTGTTGTCGGT+GGG | 0.584407 | 1.1:+70062023 | None:intergenic |
TGAAGAGAGCAGGCAGAAAG+GGG | 0.585879 | 1.1:-70061977 | MS.gene88853:CDS |
TCGCTTTCATCCAACAGATG+AGG | 0.586681 | 1.1:-70065168 | MS.gene88853:CDS |
TTCAAAGCCCGATTTACCAA+GGG | 0.588762 | 1.1:+70062080 | None:intergenic |
TAATGTAAATTCAGTTGACC+GGG | 0.596335 | 1.1:-70063665 | MS.gene88853:CDS |
ATTCAAAGCCCGATTTACCA+AGG | 0.600157 | 1.1:+70062079 | None:intergenic |
CAGCAGCCTCTGGAACCTCC+CGG | 0.601016 | 1.1:+70063647 | None:intergenic |
ACTGCAACTATGAAGAGAGC+AGG | 0.602471 | 1.1:-70061987 | MS.gene88853:CDS |
TGAAAACTGGAGACAGGCAA+TGG | 0.602773 | 1.1:-70064165 | MS.gene88853:CDS |
TTTGGATTTACATATTCAAG+GGG | 0.609182 | 1.1:+70061863 | None:intergenic |
GAAATTTAAGACTATTAGGG+AGG | 0.609647 | 1.1:-70061893 | MS.gene88853:CDS |
CCCGCTTTGAATGTTCGGAG+TGG | 0.613926 | 1.1:+70062945 | None:intergenic |
AGAAACACGAAATATGGTCA+TGG | 0.614827 | 1.1:-70063115 | MS.gene88853:CDS |
AGTTGACCGGGAGGTTCCAG+AGG | 0.618649 | 1.1:-70063653 | MS.gene88853:CDS |
TGGGATCCTGAGGATTTACC+TGG | 0.620679 | 1.1:-70065062 | MS.gene88853:intron |
GTAGATTCTCCTCAGCTCTG+TGG | 0.621558 | 1.1:-70062151 | MS.gene88853:CDS |
TGTAAATTCAGTTGACCGGG+AGG | 0.624909 | 1.1:-70063662 | MS.gene88853:CDS |
CATAACCTTCAGCTGGACTG+CGG | 0.625001 | 1.1:+70062599 | None:intergenic |
AACACCCGCAGTCCAGCTGA+AGG | 0.628590 | 1.1:-70062604 | MS.gene88853:CDS |
TCAATTTCATCATCAAACAA+CGG | 0.629730 | 1.1:+70063592 | None:intergenic |
TTCTGCTGATTGTTTCAGTG+AGG | 0.630580 | 1.1:-70065213 | MS.gene88853:CDS |
AGTGGACCGGGTCCTAAGAA+CGG | 0.632315 | 1.1:-70063748 | MS.gene88853:CDS |
AACAAAGGCCCACAGAGCTG+AGG | 0.632369 | 1.1:+70062142 | None:intergenic |
TCTAGTCGAGCAACTAGACA+TGG | 0.640127 | 1.1:-70064097 | MS.gene88853:CDS |
TATCTTGGCAGAGCTCCTAG+TGG | 0.644063 | 1.1:-70063995 | MS.gene88853:CDS |
TCAACACATCTTCAAACTGG+AGG | 0.645209 | 1.1:+70062815 | None:intergenic |
TGATGATTGAAGTCAAAGCT+GGG | 0.651527 | 1.1:+70063015 | None:intergenic |
CACTCCGAACATTCAAAGCG+GGG | 0.660148 | 1.1:-70062944 | MS.gene88853:CDS |
AAGGTAATACCTTAACATCA+CGG | 0.661498 | 1.1:+70063912 | None:intergenic |
GGAAACTGATGTGTACAAGT+GGG | 0.664415 | 1.1:-70065081 | MS.gene88853:CDS |
GGTAGGTATTGAATCAACAA+AGG | 0.665588 | 1.1:+70062127 | None:intergenic |
AGAGATAGGAAGTATCCTAA+CGG | 0.667183 | 1.1:-70064127 | MS.gene88853:CDS |
GATAGGAAGTATCCTAACGG+TGG | 0.667673 | 1.1:-70064124 | MS.gene88853:CDS |
TCGAATGTCTAGCTTCAGCA+GGG | 0.672244 | 1.1:-70062057 | MS.gene88853:CDS |
GAAGAGAGCAGGCAGAAAGG+GGG | 0.676486 | 1.1:-70061976 | MS.gene88853:CDS |
TCCACTCCGAACATTCAAAG+CGG | 0.683841 | 1.1:-70062946 | MS.gene88853:CDS |
TCCGAACATTCAAAGCGGGG+AGG | 0.705397 | 1.1:-70062941 | MS.gene88853:CDS |
TGTGTACAAGTGGGATCCTG+AGG | 0.709821 | 1.1:-70065072 | MS.gene88853:CDS |
GGTTATGCATGAGTACACCA+TGG | 0.756724 | 1.1:-70063957 | MS.gene88853:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATTTCCTTAAAATAA+TGG | - | chr1.1:70062793-70062812 | MS.gene88853:CDS | 10.0% |
!! | ATTTATTTCCTTAAAATAAT+GGG | - | chr1.1:70062794-70062813 | MS.gene88853:CDS | 10.0% |
!! | AAATTGATGAAATCATTAAA+GGG | - | chr1.1:70063538-70063557 | MS.gene88853:CDS | 15.0% |
!! | TTTGATATAAATTCATTATC+AGG | - | chr1.1:70063311-70063330 | MS.gene88853:intron | 15.0% |
!!! | AGTTTTTTTTTTTTGTCAAA+TGG | + | chr1.1:70063803-70063822 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTGTCAAAT+GGG | + | chr1.1:70063802-70063821 | None:intergenic | 15.0% |
!!! | TTTAAAATTATTGTTTCTGT+TGG | - | chr1.1:70063241-70063260 | MS.gene88853:intron | 15.0% |
!! | ACAAAATTTAAACTCCATAA+AGG | + | chr1.1:70064726-70064745 | None:intergenic | 20.0% |
!! | ATAACCAACAAAAAAAAACT+AGG | + | chr1.1:70062151-70062170 | None:intergenic | 20.0% |
!! | GAAATTGATGAAATCATTAA+AGG | - | chr1.1:70063537-70063556 | MS.gene88853:CDS | 20.0% |
!! | TGTATTTGAAAATGTAGATT+CGG | + | chr1.1:70064250-70064269 | None:intergenic | 20.0% |
!! | TTCATGTTATGACTTATAAT+TGG | - | chr1.1:70062466-70062485 | MS.gene88853:intron | 20.0% |
!!! | ATGTTTTTGGTTTTGTTTAA+TGG | - | chr1.1:70062238-70062257 | MS.gene88853:intron | 20.0% |
!!! | ATTGGAAATTTAAGACTATT+AGG | - | chr1.1:70065217-70065236 | MS.gene88853:CDS | 20.0% |
!!! | CATTTTTCCATGAATAATAT+AGG | - | chr1.1:70063966-70063985 | MS.gene88853:CDS | 20.0% |
!!! | GTTGGTTATATTAATGTTTT+TGG | - | chr1.1:70062194-70062213 | MS.gene88853:CDS | 20.0% |
!!! | TTGGAAATTTAAGACTATTA+GGG | - | chr1.1:70065218-70065237 | MS.gene88853:CDS | 20.0% |
!!! | TTGGTTATGTTTATGATTTT+TGG | - | chr1.1:70062163-70062182 | MS.gene88853:CDS | 20.0% |
!!! | TTTTAGAAAAAAAATACTCC+AGG | + | chr1.1:70063639-70063658 | None:intergenic | 20.0% |
! | AAAAAATAGATAAAGCTGAC+AGG | + | chr1.1:70062608-70062627 | None:intergenic | 25.0% |
! | AAAAACCTTATCGAAACAAA+TGG | + | chr1.1:70062406-70062425 | None:intergenic | 25.0% |
! | AAAAATAGATAAAGCTGACA+GGG | + | chr1.1:70062607-70062626 | None:intergenic | 25.0% |
! | AAAACAGATGATTACATACA+TGG | + | chr1.1:70063733-70063752 | None:intergenic | 25.0% |
! | AAATCAAAATAGTCAGTTGA+AGG | + | chr1.1:70063224-70063243 | None:intergenic | 25.0% |
! | ACCAAAAACTATGACAAATT+AGG | + | chr1.1:70064856-70064875 | None:intergenic | 25.0% |
! | ACCATTTAAAGAAGAAGAAT+GGG | - | chr1.1:70063404-70063423 | MS.gene88853:intron | 25.0% |
! | CAACAACAAAAAAGGAATAA+AGG | + | chr1.1:70063682-70063701 | None:intergenic | 25.0% |
! | CCAAAAACTATGACAAATTA+GGG | + | chr1.1:70064855-70064874 | None:intergenic | 25.0% |
! | CCAAAATATCAAATAAGCAT+AGG | + | chr1.1:70062347-70062366 | None:intergenic | 25.0% |
! | GAAATGTGATATACAATTCT+CGG | - | chr1.1:70063066-70063085 | MS.gene88853:CDS | 25.0% |
! | TCAATTTCATCATCAAACAA+CGG | + | chr1.1:70063525-70063544 | None:intergenic | 25.0% |
! | TGTACATAATATTCACAACA+AGG | + | chr1.1:70062301-70062320 | None:intergenic | 25.0% |
! | TTAATGTAAATTCAGTTGAC+CGG | - | chr1.1:70063448-70063467 | MS.gene88853:intron | 25.0% |
! | TTGAGAACCAAAAATATCTA+CGG | + | chr1.1:70062711-70062730 | None:intergenic | 25.0% |
!! | AAACTTTGCAGCTTTTTATA+AGG | - | chr1.1:70063818-70063837 | MS.gene88853:intron | 25.0% |
!! | AACTTTGCAGCTTTTTATAA+GGG | - | chr1.1:70063819-70063838 | MS.gene88853:intron | 25.0% |
!! | ATAATTGGTGTTTATTCGAT+GGG | - | chr1.1:70062481-70062500 | MS.gene88853:intron | 25.0% |
!! | CCTATGCTTATTTGATATTT+TGG | - | chr1.1:70062344-70062363 | MS.gene88853:intron | 25.0% |
!! | CTTGTATATGTTGGTAAATA+TGG | - | chr1.1:70062753-70062772 | MS.gene88853:CDS | 25.0% |
!! | TATAATTGGTGTTTATTCGA+TGG | - | chr1.1:70062480-70062499 | MS.gene88853:intron | 25.0% |
!! | TGATTTTACTTTCTTCGATT+TGG | - | chr1.1:70064611-70064630 | MS.gene88853:intron | 25.0% |
!! | TTACACTTCTTCATTTCTTT+TGG | - | chr1.1:70062881-70062900 | MS.gene88853:CDS | 25.0% |
!!! | AAGGTTTTTGTGTGTTATTT+GGG | - | chr1.1:70062417-70062436 | MS.gene88853:intron | 25.0% |
!!! | ATATTTTGGATGTGTTTTTC+AGG | - | chr1.1:70062358-70062377 | MS.gene88853:intron | 25.0% |
!!! | ATGTTTTTGGTTTTGTTTGT+TGG | - | chr1.1:70062207-70062226 | MS.gene88853:CDS | 25.0% |
!!! | GGTTTTGTTTAATGGTTATA+AGG | - | chr1.1:70062246-70062265 | MS.gene88853:intron | 25.0% |
!!! | GTCAGCTTTATCTATTTTTT+GGG | - | chr1.1:70062608-70062627 | MS.gene88853:CDS | 25.0% |
!!! | TAAGGTTTTTGTGTGTTATT+TGG | - | chr1.1:70062416-70062435 | MS.gene88853:intron | 25.0% |
!!! | TATTCCTTTTTTGTTGTTGT+GGG | - | chr1.1:70063683-70063702 | MS.gene88853:CDS | 25.0% |
!!! | TCAGCTTTATCTATTTTTTG+GGG | - | chr1.1:70062609-70062628 | MS.gene88853:CDS | 25.0% |
!!! | TCCAAAAACCCATTATTTTA+AGG | + | chr1.1:70062805-70062824 | None:intergenic | 25.0% |
!!! | TCCTTAAAATAATGGGTTTT+TGG | - | chr1.1:70062801-70062820 | MS.gene88853:CDS | 25.0% |
!!! | TGATTTTTGGTTTTGTTTGT+TGG | - | chr1.1:70062176-70062195 | MS.gene88853:CDS | 25.0% |
!!! | TGTCAGCTTTATCTATTTTT+TGG | - | chr1.1:70062607-70062626 | MS.gene88853:CDS | 25.0% |
!!! | TTATTCCTTTTTTGTTGTTG+TGG | - | chr1.1:70063682-70063701 | MS.gene88853:CDS | 25.0% |
!!! | TTGACCTAGTTTTTTTTTGT+TGG | - | chr1.1:70062144-70062163 | MS.gene88853:CDS | 25.0% |
AAGGTAATACCTTAACATCA+CGG | + | chr1.1:70063205-70063224 | None:intergenic | 30.0% | |
ACAAAATGACAATCACCAAT+CGG | + | chr1.1:70062125-70062144 | None:intergenic | 30.0% | |
ACCAATCGGAAAAACATAAA+AGG | + | chr1.1:70062111-70062130 | None:intergenic | 30.0% | |
ATCTGAAAAGGAAGATTTGT+GGG | - | chr1.1:70061984-70062003 | MS.gene88853:CDS | 30.0% | |
CACATAAAGCAATAAGAATC+GGG | + | chr1.1:70065180-70065199 | None:intergenic | 30.0% | |
CACCATTTAAAGAAGAAGAA+TGG | - | chr1.1:70063403-70063422 | MS.gene88853:intron | 30.0% | |
GAGATCAAAACTACAAAAAC+AGG | + | chr1.1:70063761-70063780 | None:intergenic | 30.0% | |
GCACATAAAGCAATAAGAAT+CGG | + | chr1.1:70065181-70065200 | None:intergenic | 30.0% | |
TAATGTAAATTCAGTTGACC+GGG | - | chr1.1:70063449-70063468 | MS.gene88853:intron | 30.0% | |
TATCTGAAAAGGAAGATTTG+TGG | - | chr1.1:70061983-70062002 | MS.gene88853:CDS | 30.0% | |
TCAGCAACCTATATTATTCA+TGG | + | chr1.1:70063976-70063995 | None:intergenic | 30.0% | |
TGATGAAGAAACACGAAATA+TGG | - | chr1.1:70063993-70064012 | MS.gene88853:CDS | 30.0% | |
TTCTGCTTAGAAAATGTCAT+AGG | - | chr1.1:70064825-70064844 | MS.gene88853:intron | 30.0% | |
! | ACCTTTTATGTTTTTCCGAT+TGG | - | chr1.1:70062107-70062126 | MS.gene88853:CDS | 30.0% |
! | ATCAAACTGTTGATGAATTC+TGG | - | chr1.1:70064472-70064491 | MS.gene88853:intron | 30.0% |
! | GAAATTTAAGACTATTAGGG+AGG | - | chr1.1:70065221-70065240 | MS.gene88853:CDS | 30.0% |
! | GTTGGTTATGTTCATGTTTT+TGG | - | chr1.1:70062225-70062244 | MS.gene88853:CDS | 30.0% |
! | TCTTTTTCTGTCATAGAGAT+AGG | - | chr1.1:70062973-70062992 | MS.gene88853:CDS | 30.0% |
! | TGGTGATGTATTATCTGAAA+AGG | - | chr1.1:70061972-70061991 | MS.gene88853:CDS | 30.0% |
!! | AAGACACTTGTTTTCTATCT+TGG | - | chr1.1:70063104-70063123 | MS.gene88853:CDS | 30.0% |
!! | ATGGTTATAAGGTGTTGATT+TGG | - | chr1.1:70062257-70062276 | MS.gene88853:intron | 30.0% |
!! | CCCTAATTTGTCATAGTTTT+TGG | - | chr1.1:70064852-70064871 | MS.gene88853:intron | 30.0% |
!! | TACAAGGTTTTCAAGAAAAG+TGG | - | chr1.1:70063348-70063367 | MS.gene88853:intron | 30.0% |
!! | TGGTTATAAGGTGTTGATTT+GGG | - | chr1.1:70062258-70062277 | MS.gene88853:intron | 30.0% |
!! | TTTACTTTCTTCGATTTGGA+TGG | - | chr1.1:70064615-70064634 | MS.gene88853:intron | 30.0% |
!!! | CATAGTTTTTGGTCATGTTT+AGG | - | chr1.1:70064863-70064882 | MS.gene88853:intron | 30.0% |
AAAGAAACATCTCTGCATCT+TGG | + | chr1.1:70064341-70064360 | None:intergenic | 35.0% | |
ACAAATCCAGGTATAGTCAT+TGG | - | chr1.1:70064555-70064574 | MS.gene88853:intron | 35.0% | |
AGAAACACGAAATATGGTCA+TGG | - | chr1.1:70063999-70064018 | MS.gene88853:CDS | 35.0% | |
AGAAGAACAATACTACGATC+AGG | + | chr1.1:70063890-70063909 | None:intergenic | 35.0% | |
ATATACAATTCTCGGTCAGT+TGG | - | chr1.1:70063074-70063093 | MS.gene88853:CDS | 35.0% | |
CAATAAGAATCGGGAAGAAA+AGG | + | chr1.1:70065171-70065190 | None:intergenic | 35.0% | |
CATGCATATATGAATAGCAC+TGG | - | chr1.1:70064396-70064415 | MS.gene88853:intron | 35.0% | |
CTGAAAATCCCTTGGTAAAT+CGG | - | chr1.1:70065026-70065045 | MS.gene88853:intron | 35.0% | |
GAACAATCTTTCCTGAAAAC+TGG | - | chr1.1:70062936-70062955 | MS.gene88853:CDS | 35.0% | |
GAAGAGCAAAATCAAATACC+AGG | + | chr1.1:70062073-70062092 | None:intergenic | 35.0% | |
GACTTCCATTTGTTTCGATA+AGG | - | chr1.1:70062398-70062417 | MS.gene88853:intron | 35.0% | |
GATGATCTGCTTGTATATGT+TGG | - | chr1.1:70062744-70062763 | MS.gene88853:CDS | 35.0% | |
GCCCATTCTTCTTCTTTAAA+TGG | + | chr1.1:70063408-70063427 | None:intergenic | 35.0% | |
GGACTATTATGCACTTTACA+AGG | - | chr1.1:70063332-70063351 | MS.gene88853:intron | 35.0% | |
GTTGAAGTTCAACGTTATCA+AGG | - | chr1.1:70062012-70062031 | MS.gene88853:CDS | 35.0% | |
TATGAGAGAAGACCAATAGA+AGG | + | chr1.1:70063923-70063942 | None:intergenic | 35.0% | |
TCTTTCTCTCTAACAAATCC+AGG | - | chr1.1:70064543-70064562 | MS.gene88853:intron | 35.0% | |
TGAAAATCCCTTGGTAAATC+GGG | - | chr1.1:70065027-70065046 | MS.gene88853:intron | 35.0% | |
TGATGATTGAAGTCAAAGCT+GGG | + | chr1.1:70064102-70064121 | None:intergenic | 35.0% | |
TGCTTTATGTGCTTTCTTGT+GGG | - | chr1.1:70065189-70065208 | MS.gene88853:CDS | 35.0% | |
TGTACAGTACTTAGCAATTC+AGG | - | chr1.1:70062315-70062334 | MS.gene88853:intron | 35.0% | |
TTGCTTTATGTGCTTTCTTG+TGG | - | chr1.1:70065188-70065207 | MS.gene88853:CDS | 35.0% | |
! | GATAGGTCCGTAGATATTTT+TGG | - | chr1.1:70062701-70062720 | MS.gene88853:CDS | 35.0% |
! | GCAGCTTTTTATAAGGGTTT+TGG | - | chr1.1:70063825-70063844 | MS.gene88853:intron | 35.0% |
! | TGATTTTCAGTGCTTTCAGT+AGG | + | chr1.1:70064914-70064933 | None:intergenic | 35.0% |
! | TTGAGATCTCTTGGTTGATA+TGG | - | chr1.1:70062636-70062655 | MS.gene88853:CDS | 35.0% |
! | TTGATGATTGAAGTCAAAGC+TGG | + | chr1.1:70064103-70064122 | None:intergenic | 35.0% |
!! | AGAGATAGGAAGTATCCTAA+CGG | - | chr1.1:70062987-70063006 | MS.gene88853:CDS | 35.0% |
!! | GGTAGGTATTGAATCAACAA+AGG | + | chr1.1:70064990-70065009 | None:intergenic | 35.0% |
!! | GTTTTTGAGCCAATTTCAAG+TGG | - | chr1.1:70064799-70064818 | MS.gene88853:intron | 35.0% |
!!! | CTAGATTGCTGTTTTTCACT+TGG | + | chr1.1:70064057-70064076 | None:intergenic | 35.0% |
!!! | CTCTCTTGTTTTCCTTCTAT+TGG | - | chr1.1:70063908-70063927 | MS.gene88853:intron | 35.0% |
!!! | CTTTTTTGTTGTTGTGGGTA+GGG | - | chr1.1:70063688-70063707 | MS.gene88853:CDS | 35.0% |
!!! | TTTTTTGTTGTTGTGGGTAG+GGG | - | chr1.1:70063689-70063708 | MS.gene88853:CDS | 35.0% |
AACATCTCTGCATCTTGGTA+AGG | + | chr1.1:70064336-70064355 | None:intergenic | 40.0% | |
AACTCGTACAAACAGATTCG+CGG | + | chr1.1:70062512-70062531 | None:intergenic | 40.0% | |
AAGCTACAATGTTGCTCAAC+TGG | - | chr1.1:70064581-70064600 | MS.gene88853:intron | 40.0% | |
ACTTGGATCAGGGAATATCA+TGG | + | chr1.1:70064040-70064059 | None:intergenic | 40.0% | |
AGGAAACTGATGTGTACAAG+TGG | - | chr1.1:70062032-70062051 | MS.gene88853:CDS | 40.0% | |
AGTTTCCTTCAGTGCATGAT+AGG | - | chr1.1:70062684-70062703 | MS.gene88853:CDS | 40.0% | |
ATTCAAAGCCCGATTTACCA+AGG | + | chr1.1:70065038-70065057 | None:intergenic | 40.0% | |
CAAATACCAGGTAAATCCTC+AGG | + | chr1.1:70062061-70062080 | None:intergenic | 40.0% | |
CAAATGGAAGTCAACTCTTG+AGG | + | chr1.1:70062390-70062409 | None:intergenic | 40.0% | |
CACTCAACACATCTTCAAAC+TGG | + | chr1.1:70064305-70064324 | None:intergenic | 40.0% | |
CATAACCATTCACATGTTGC+TGG | + | chr1.1:70063590-70063609 | None:intergenic | 40.0% | |
CATGGAAAAATGTCTGTCAG+CGG | + | chr1.1:70063958-70063977 | None:intergenic | 40.0% | |
CCTACCCACAACAACAAAAA+AGG | + | chr1.1:70063690-70063709 | None:intergenic | 40.0% | |
CTTAAGCTCATCTTCATCCA+TGG | + | chr1.1:70063177-70063196 | None:intergenic | 40.0% | |
GATGCAGAGATGTTTCTTTG+TGG | - | chr1.1:70064342-70064361 | MS.gene88853:intron | 40.0% | |
GCTTTCTTGTGGGTTTCTAT+TGG | - | chr1.1:70065199-70065218 | MS.gene88853:CDS | 40.0% | |
GGAAACTGATGTGTACAAGT+GGG | - | chr1.1:70062033-70062052 | MS.gene88853:CDS | 40.0% | |
GGTCATGGATCAATTCTATG+AGG | - | chr1.1:70064014-70064033 | MS.gene88853:CDS | 40.0% | |
TAAGACATGCCGTGATGTTA+AGG | - | chr1.1:70063193-70063212 | MS.gene88853:intron | 40.0% | |
TCAACACATCTTCAAACTGG+AGG | + | chr1.1:70064302-70064321 | None:intergenic | 40.0% | |
TGGTGATCAGTCTTACATCT+AGG | + | chr1.1:70062555-70062574 | None:intergenic | 40.0% | |
TTCAAAGCCCGATTTACCAA+GGG | + | chr1.1:70065037-70065056 | None:intergenic | 40.0% | |
TTTCTTCGTTAATAGACCCC+AGG | + | chr1.1:70064368-70064387 | None:intergenic | 40.0% | |
! | ATTGGTGTTTATTCGATGGG+TGG | - | chr1.1:70062484-70062503 | MS.gene88853:intron | 40.0% |
! | TTCTGCTGATTGTTTCAGTG+AGG | - | chr1.1:70061901-70061920 | MS.gene88853:CDS | 40.0% |
!! | ACAGTTTGATTTGCGTCTTC+TGG | + | chr1.1:70064462-70064481 | None:intergenic | 40.0% |
!! | GGTTTTCAAGAAAAGTGGAC+CGG | - | chr1.1:70063353-70063372 | MS.gene88853:intron | 40.0% |
!! | GTTTTCAAGAAAAGTGGACC+GGG | - | chr1.1:70063354-70063373 | MS.gene88853:intron | 40.0% |
!! | TGGTTATGTTGACTTTCCTC+AGG | - | chr1.1:70063602-70063621 | MS.gene88853:CDS | 40.0% |
!! | TTGATTTGCGTCTTCTGGAT+TGG | + | chr1.1:70064457-70064476 | None:intergenic | 40.0% |
!!! | CCTTTTTTGTTGTTGTGGGT+AGG | - | chr1.1:70063687-70063706 | MS.gene88853:CDS | 40.0% |
!!! | GCTGTTTTTCACTTGGATCA+GGG | + | chr1.1:70064050-70064069 | None:intergenic | 40.0% |
!!! | TGCTGTTTTTCACTTGGATC+AGG | + | chr1.1:70064051-70064070 | None:intergenic | 40.0% |
!!! | TTTTTGTTGTTGTGGGTAGG+GGG | - | chr1.1:70063690-70063709 | MS.gene88853:CDS | 40.0% |
ACCTGCAGCAATGTTGTTGT+CGG | + | chr1.1:70065098-70065117 | None:intergenic | 45.0% | |
ACTGCAACTATGAAGAGAGC+AGG | - | chr1.1:70065127-70065146 | MS.gene88853:CDS | 45.0% | |
AGAGATGTTTCTTTGTGGCC+TGG | - | chr1.1:70064347-70064366 | MS.gene88853:intron | 45.0% | |
AGATGTTTCTTTGTGGCCTG+GGG | - | chr1.1:70064349-70064368 | MS.gene88853:intron | 45.0% | |
AGTCCAGCTGAAGGTTATGA+TGG | - | chr1.1:70064519-70064538 | MS.gene88853:intron | 45.0% | |
ATCACCAACTCCTCATCTGT+TGG | + | chr1.1:70061959-70061978 | None:intergenic | 45.0% | |
ATCAGCTGCTGAAAATCCCT+TGG | - | chr1.1:70065018-70065037 | MS.gene88853:intron | 45.0% | |
ATGAAGAGAGCAGGCAGAAA+GGG | - | chr1.1:70065136-70065155 | MS.gene88853:CDS | 45.0% | |
CATTCACATGTTGCTGGTCA+AGG | + | chr1.1:70063584-70063603 | None:intergenic | 45.0% | |
CCATACTGTTCACCGTTCTT+AGG | + | chr1.1:70063381-70063400 | None:intergenic | 45.0% | |
CCTAAGAACGGTGAACAGTA+TGG | - | chr1.1:70063378-70063397 | MS.gene88853:intron | 45.0% | |
CTTGACCAGCAACATGTGAA+TGG | - | chr1.1:70063582-70063601 | MS.gene88853:CDS | 45.0% | |
CTTGTGCCAATGACTATACC+TGG | + | chr1.1:70064564-70064583 | None:intergenic | 45.0% | |
CTTTCCTGAAAACTGGAGAC+AGG | - | chr1.1:70062943-70062962 | MS.gene88853:CDS | 45.0% | |
GAACCATCATAACCTTCAGC+TGG | + | chr1.1:70064525-70064544 | None:intergenic | 45.0% | |
GAGATGTTTCTTTGTGGCCT+GGG | - | chr1.1:70064348-70064367 | MS.gene88853:intron | 45.0% | |
GAGCTCAGCAGAAATGAGAT+GGG | + | chr1.1:70064653-70064672 | None:intergenic | 45.0% | |
GCAGAAGAGCCACTTGAAAT+TGG | + | chr1.1:70064811-70064830 | None:intergenic | 45.0% | |
GGTTATGCATGAGTACACCA+TGG | - | chr1.1:70063157-70063176 | MS.gene88853:intron | 45.0% | |
GTTGGATGAAAGCGAAAACC+TGG | + | chr1.1:70061941-70061960 | None:intergenic | 45.0% | |
TAGATTCTCCTCAGCTCTGT+GGG | - | chr1.1:70064964-70064983 | MS.gene88853:intron | 45.0% | |
TAGTGGTGAGCGAACTGATT+GGG | - | chr1.1:70063136-70063155 | MS.gene88853:intron | 45.0% | |
TATGAAGAGAGCAGGCAGAA+AGG | - | chr1.1:70065135-70065154 | MS.gene88853:CDS | 45.0% | |
TCATCCAACAGATGAGGAGT+TGG | - | chr1.1:70061952-70061971 | MS.gene88853:CDS | 45.0% | |
TCCACTCCGAACATTCAAAG+CGG | - | chr1.1:70064168-70064187 | MS.gene88853:CDS | 45.0% | |
TCGCTTTCATCCAACAGATG+AGG | - | chr1.1:70061946-70061965 | MS.gene88853:CDS | 45.0% | |
TCTAGTCGAGCAACTAGACA+TGG | - | chr1.1:70063017-70063036 | MS.gene88853:CDS | 45.0% | |
TGAAAACTGGAGACAGGCAA+TGG | - | chr1.1:70062949-70062968 | MS.gene88853:CDS | 45.0% | |
TGGGGTATGTTGAGATCTCT+TGG | - | chr1.1:70062627-70062646 | MS.gene88853:CDS | 45.0% | |
TGTAAATTCAGTTGACCGGG+AGG | - | chr1.1:70063452-70063471 | MS.gene88853:intron | 45.0% | |
! | ATCGAATGTCTAGCTTCAGC+AGG | - | chr1.1:70065056-70065075 | MS.gene88853:intron | 45.0% |
! | ATTGCCTGTCTCCAGTTTTC+AGG | + | chr1.1:70062950-70062969 | None:intergenic | 45.0% |
! | CTCTTGGTTGATATGGTCAG+TGG | - | chr1.1:70062643-70062662 | MS.gene88853:CDS | 45.0% |
! | CTTCTGGATTGGACAACAAC+TGG | + | chr1.1:70064446-70064465 | None:intergenic | 45.0% |
! | CTTTTACGAGGAAGGCTTCT+TGG | - | chr1.1:70064203-70064222 | MS.gene88853:intron | 45.0% |
! | GAGCTTGTCTTTTACGAGGA+AGG | - | chr1.1:70064195-70064214 | MS.gene88853:intron | 45.0% |
! | TCGAATGTCTAGCTTCAGCA+GGG | - | chr1.1:70065057-70065076 | MS.gene88853:intron | 45.0% |
!! | GATAGGAAGTATCCTAACGG+TGG | - | chr1.1:70062990-70063009 | MS.gene88853:CDS | 45.0% |
!! | GTGTATTTCTGAAGCACCTG+AGG | - | chr1.1:70064140-70064159 | MS.gene88853:CDS | 45.0% |
AATGAACCCCACAAAGGGGA+GGG | + | chr1.1:70062582-70062601 | None:intergenic | 50.0% | |
ACATGTTGCTGGTCAAGGAC+AGG | + | chr1.1:70063579-70063598 | None:intergenic | 50.0% | |
ACATTGTCAACAGCAGCCTC+TGG | + | chr1.1:70063480-70063499 | None:intergenic | 50.0% | |
ACCGACAACAACATTGCTGC+AGG | - | chr1.1:70065094-70065113 | MS.gene88853:CDS | 50.0% | |
ACGGACCTATCATGCACTGA+AGG | + | chr1.1:70062692-70062711 | None:intergenic | 50.0% | |
AGGGTCAATGAACCCCACAA+AGG | + | chr1.1:70062588-70062607 | None:intergenic | 50.0% | |
ATAACCTTCAGCTGGACTGC+GGG | + | chr1.1:70064517-70064536 | None:intergenic | 50.0% | |
CAATCAGTTCGCTCACCACT+AGG | + | chr1.1:70063137-70063156 | None:intergenic | 50.0% | |
CACTCCGAACATTCAAAGCG+GGG | - | chr1.1:70064170-70064189 | MS.gene88853:CDS | 50.0% | |
CATAACCTTCAGCTGGACTG+CGG | + | chr1.1:70064518-70064537 | None:intergenic | 50.0% | |
CATGGCTACTGGAAAGCTAC+TGG | - | chr1.1:70063035-70063054 | MS.gene88853:CDS | 50.0% | |
CCACTCCGAACATTCAAAGC+GGG | - | chr1.1:70064169-70064188 | MS.gene88853:CDS | 50.0% | |
CGAGCTCAGCAGAAATGAGA+TGG | + | chr1.1:70064654-70064673 | None:intergenic | 50.0% | |
CTAGTGGTGAGCGAACTGAT+TGG | - | chr1.1:70063135-70063154 | MS.gene88853:intron | 50.0% | |
GAGCAACTAGACATGGCTAC+TGG | - | chr1.1:70063024-70063043 | MS.gene88853:CDS | 50.0% | |
GCAGCAATGTTGTTGTCGGT+GGG | + | chr1.1:70065094-70065113 | None:intergenic | 50.0% | |
GGGTCAATGAACCCCACAAA+GGG | + | chr1.1:70062587-70062606 | None:intergenic | 50.0% | |
GGTCAATGAACCCCACAAAG+GGG | + | chr1.1:70062586-70062605 | None:intergenic | 50.0% | |
GTAGATTCTCCTCAGCTCTG+TGG | - | chr1.1:70064963-70064982 | MS.gene88853:intron | 50.0% | |
TATCTTGGCAGAGCTCCTAG+TGG | - | chr1.1:70063119-70063138 | MS.gene88853:CDS | 50.0% | |
TCGTCACAGTTTACTGCTCC+TGG | - | chr1.1:70064671-70064690 | MS.gene88853:intron | 50.0% | |
TGAAGAGAGCAGGCAGAAAG+GGG | - | chr1.1:70065137-70065156 | MS.gene88853:CDS | 50.0% | |
TGCAGCAATGTTGTTGTCGG+TGG | + | chr1.1:70065095-70065114 | None:intergenic | 50.0% | |
TGGGATCCTGAGGATTTACC+TGG | - | chr1.1:70062052-70062071 | MS.gene88853:CDS | 50.0% | |
TGTGTACAAGTGGGATCCTG+AGG | - | chr1.1:70062042-70062061 | MS.gene88853:CDS | 50.0% | |
TGTTCACCGTTCTTAGGACC+CGG | + | chr1.1:70063375-70063394 | None:intergenic | 50.0% | |
! | GGAGGAGCTTGTCTTTTACG+AGG | - | chr1.1:70064191-70064210 | MS.gene88853:intron | 50.0% |
! | GGATTTTCAGCAGCTGATGC+AGG | + | chr1.1:70065016-70065035 | None:intergenic | 50.0% |
! | GGTGTTGTGTGTGACTCTGT+CGG | - | chr1.1:70064884-70064903 | MS.gene88853:intron | 50.0% |
! | TCCTCCCCGCTTTGAATGTT+CGG | + | chr1.1:70064177-70064196 | None:intergenic | 50.0% |
!! | GGAAGTATCCTAACGGTGGA+AGG | - | chr1.1:70062994-70063013 | MS.gene88853:CDS | 50.0% |
AACAAAGGCCCACAGAGCTG+AGG | + | chr1.1:70064975-70064994 | None:intergenic | 55.0% | |
AGTGGACCGGGTCCTAAGAA+CGG | - | chr1.1:70063366-70063385 | MS.gene88853:intron | 55.0% | |
ATGAACCCCACAAAGGGGAG+GGG | + | chr1.1:70062581-70062600 | None:intergenic | 55.0% | |
CAATGAACCCCACAAAGGGG+AGG | + | chr1.1:70062583-70062602 | None:intergenic | 55.0% | |
CGACTAGACCTTCCACCGTT+AGG | + | chr1.1:70063005-70063024 | None:intergenic | 55.0% | |
GAAGAGAGCAGGCAGAAAGG+GGG | - | chr1.1:70065138-70065157 | MS.gene88853:CDS | 55.0% | |
GCGCGTGGCAGAAACCTTTA+TGG | - | chr1.1:70064709-70064728 | MS.gene88853:intron | 55.0% | |
TCCGAACATTCAAAGCGGGG+AGG | - | chr1.1:70064173-70064192 | MS.gene88853:CDS | 55.0% | |
TTCAGCAGCTGATGCAGGAG+TGG | + | chr1.1:70065011-70065030 | None:intergenic | 55.0% | |
TTCGGAGTGGAAGTGACCTC+AGG | + | chr1.1:70064159-70064178 | None:intergenic | 55.0% | |
! | CCCGCTTTGAATGTTCGGAG+TGG | + | chr1.1:70064172-70064191 | None:intergenic | 55.0% |
! | TTGTTGTTGTGGGTAGGGGG+AGG | - | chr1.1:70063693-70063712 | MS.gene88853:CDS | 55.0% |
AACACCCGCAGTCCAGCTGA+AGG | - | chr1.1:70064510-70064529 | MS.gene88853:intron | 60.0% | |
ACCAGTTCCCCTCCCCTTTG+TGG | - | chr1.1:70062571-70062590 | MS.gene88853:intron | 60.0% | |
AGTTGACCGGGAGGTTCCAG+AGG | - | chr1.1:70063461-70063480 | MS.gene88853:intron | 60.0% | |
CAGTTCCCCTCCCCTTTGTG+GGG | - | chr1.1:70062573-70062592 | MS.gene88853:CDS | 60.0% | |
CCAGGCAGATCACACACCTG+AGG | + | chr1.1:70063621-70063640 | None:intergenic | 60.0% | |
CCAGTTCCCCTCCCCTTTGT+GGG | - | chr1.1:70062572-70062591 | MS.gene88853:CDS | 60.0% | |
CCTCAGGTGTGTGATCTGCC+TGG | - | chr1.1:70063618-70063637 | MS.gene88853:CDS | 60.0% | |
GAGGTGATGTCGTCGATGCC+AGG | - | chr1.1:70061920-70061939 | MS.gene88853:CDS | 60.0% | |
GCAGCTGATGCAGGAGTGGT+AGG | + | chr1.1:70065007-70065026 | None:intergenic | 60.0% | |
GGTTTCTGCCACGCGCAAGT+TGG | + | chr1.1:70064705-70064724 | None:intergenic | 60.0% | |
TTGACACGCCAACTTGCGCG+TGG | - | chr1.1:70064694-70064713 | MS.gene88853:intron | 60.0% | |
! | CGCAAGTTGGCGTGTCAACC+AGG | + | chr1.1:70064692-70064711 | None:intergenic | 60.0% |
CCCACAAAGGGGAGGGGAAC+TGG | + | chr1.1:70062575-70062594 | None:intergenic | 65.0% | |
!! | CAGCAGCCTCTGGAACCTCC+CGG | + | chr1.1:70063470-70063489 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 70061878 | 70065258 | 70061878 | ID=MS.gene88853 |
chr1.1 | mRNA | 70061878 | 70065258 | 70061878 | ID=MS.gene88853.t1;Parent=MS.gene88853 |
chr1.1 | exon | 70065063 | 70065258 | 70065063 | ID=MS.gene88853.t1.exon1;Parent=MS.gene88853.t1 |
chr1.1 | CDS | 70065063 | 70065258 | 70065063 | ID=cds.MS.gene88853.t1;Parent=MS.gene88853.t1 |
chr1.1 | exon | 70063922 | 70064199 | 70063922 | ID=MS.gene88853.t1.exon2;Parent=MS.gene88853.t1 |
chr1.1 | CDS | 70063922 | 70064199 | 70063922 | ID=cds.MS.gene88853.t1;Parent=MS.gene88853.t1 |
chr1.1 | exon | 70063513 | 70063803 | 70063513 | ID=MS.gene88853.t1.exon3;Parent=MS.gene88853.t1 |
chr1.1 | CDS | 70063513 | 70063803 | 70063513 | ID=cds.MS.gene88853.t1;Parent=MS.gene88853.t1 |
chr1.1 | exon | 70062572 | 70063148 | 70062572 | ID=MS.gene88853.t1.exon4;Parent=MS.gene88853.t1 |
chr1.1 | CDS | 70062572 | 70063148 | 70062572 | ID=cds.MS.gene88853.t1;Parent=MS.gene88853.t1 |
chr1.1 | exon | 70061878 | 70062251 | 70061878 | ID=MS.gene88853.t1.exon5;Parent=MS.gene88853.t1 |
chr1.1 | CDS | 70061878 | 70062251 | 70061878 | ID=cds.MS.gene88853.t1;Parent=MS.gene88853.t1 |
Gene Sequence |
Protein sequence |