Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89582.t1 | XP_013467901.1 | 56.7 | 554 | 204 | 8 | 33 | 576 | 32 | 559 | 6.60E-157 | 564.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89582.t1 | Q9FLH8 | 66.1 | 322 | 103 | 1 | 260 | 575 | 13 | 334 | 6.1e-119 | 429.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89582.t1 | A0A072VKK1 | 56.7 | 554 | 204 | 8 | 33 | 576 | 32 | 559 | 4.8e-157 | 564.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89582 | MS.gene28335 | PPI |
| MS.gene85276 | MS.gene89582 | PPI |
| MS.gene89582 | MS.gene052011 | PPI |
| MS.gene89582 | MS.gene98726 | PPI |
| MS.gene89582 | MS.gene46881 | PPI |
| MS.gene032177 | MS.gene89582 | PPI |
| MS.gene056386 | MS.gene89582 | PPI |
| MS.gene89582 | MS.gene003877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89582.t1 | MTR_1g057810 | 55.119 | 586 | 217 | 11 | 8 | 577 | 5 | 560 | 0.0 | 548 |
| MS.gene89582.t1 | MTR_1g069745 | 86.275 | 306 | 30 | 2 | 282 | 587 | 1 | 294 | 0.0 | 529 |
| MS.gene89582.t1 | MTR_1g101950 | 78.932 | 337 | 64 | 2 | 250 | 580 | 4 | 339 | 0.0 | 529 |
| MS.gene89582.t1 | MTR_1g105150 | 53.584 | 586 | 212 | 12 | 8 | 577 | 5 | 546 | 1.25e-178 | 516 |
| MS.gene89582.t1 | MTR_1g069490 | 60.722 | 443 | 129 | 7 | 143 | 582 | 2 | 402 | 3.23e-168 | 484 |
| MS.gene89582.t1 | MTR_6g089480 | 76.667 | 300 | 70 | 0 | 279 | 578 | 9 | 308 | 4.21e-168 | 480 |
| MS.gene89582.t1 | MTR_6g089480 | 77.273 | 264 | 60 | 0 | 279 | 542 | 9 | 272 | 5.21e-147 | 425 |
| MS.gene89582.t1 | MTR_6g089480 | 77.863 | 262 | 58 | 0 | 279 | 540 | 9 | 270 | 9.86e-147 | 424 |
| MS.gene89582.t1 | MTR_5g079460 | 63.988 | 336 | 112 | 3 | 250 | 577 | 45 | 379 | 3.72e-139 | 409 |
| MS.gene89582.t1 | MTR_4g067310 | 58.044 | 317 | 125 | 3 | 268 | 578 | 13 | 327 | 6.34e-121 | 360 |
| MS.gene89582.t1 | MTR_2g098950 | 56.825 | 315 | 128 | 3 | 270 | 578 | 14 | 326 | 1.87e-120 | 359 |
| MS.gene89582.t1 | MTR_1g076850 | 56.190 | 315 | 130 | 3 | 270 | 578 | 8 | 320 | 1.38e-119 | 357 |
| MS.gene89582.t1 | MTR_7g075860 | 57.143 | 315 | 127 | 2 | 270 | 576 | 41 | 355 | 1.10e-118 | 356 |
| MS.gene89582.t1 | MTR_1g054730 | 59.245 | 265 | 77 | 2 | 314 | 578 | 154 | 387 | 9.64e-91 | 285 |
| MS.gene89582.t1 | MTR_1g054730 | 45.455 | 88 | 31 | 3 | 32 | 115 | 84 | 158 | 5.39e-12 | 68.2 |
| MS.gene89582.t1 | MTR_0046s0180 | 74.757 | 103 | 26 | 0 | 476 | 578 | 7 | 109 | 3.83e-46 | 158 |
| MS.gene89582.t1 | MTR_8g096570 | 48.276 | 174 | 77 | 4 | 33 | 200 | 66 | 232 | 1.65e-41 | 160 |
| MS.gene89582.t1 | MTR_5g044990 | 30.719 | 306 | 185 | 7 | 290 | 573 | 250 | 550 | 1.77e-40 | 155 |
| MS.gene89582.t1 | MTR_4g019165 | 31.250 | 320 | 187 | 6 | 288 | 575 | 131 | 449 | 3.59e-39 | 149 |
| MS.gene89582.t1 | MTR_1g069480 | 54.955 | 111 | 37 | 6 | 71 | 175 | 7 | 110 | 1.63e-22 | 93.2 |
| MS.gene89582.t1 | MTR_0046s0210 | 37.179 | 156 | 82 | 6 | 176 | 318 | 1 | 153 | 3.83e-13 | 67.8 |
| MS.gene89582.t1 | MTR_1g071270 | 43.810 | 105 | 45 | 4 | 115 | 210 | 10 | 109 | 1.77e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89582.t1 | AT5G51830 | 66.149 | 322 | 103 | 1 | 260 | 575 | 13 | 334 | 4.81e-150 | 436 |
| MS.gene89582.t1 | AT5G51830 | 66.149 | 322 | 103 | 1 | 260 | 575 | 13 | 334 | 4.81e-150 | 436 |
| MS.gene89582.t1 | AT1G66430 | 64.220 | 327 | 110 | 2 | 255 | 575 | 50 | 375 | 7.03e-144 | 421 |
| MS.gene89582.t1 | AT4G10260 | 59.091 | 308 | 118 | 3 | 270 | 571 | 6 | 311 | 8.24e-121 | 360 |
| MS.gene89582.t1 | AT2G31390 | 56.075 | 321 | 133 | 3 | 264 | 578 | 3 | 321 | 3.07e-119 | 356 |
| MS.gene89582.t1 | AT3G59480 | 55.205 | 317 | 134 | 3 | 265 | 575 | 5 | 319 | 9.26e-119 | 355 |
| MS.gene89582.t1 | AT1G06030 | 54.462 | 325 | 140 | 3 | 260 | 578 | 1 | 323 | 5.19e-118 | 353 |
| MS.gene89582.t1 | AT1G06020 | 54.603 | 315 | 135 | 2 | 270 | 578 | 10 | 322 | 3.43e-114 | 344 |
| MS.gene89582.t1 | AT3G54090 | 31.564 | 358 | 191 | 8 | 270 | 575 | 103 | 458 | 6.31e-45 | 166 |
| MS.gene89582.t1 | AT1G50390 | 47.647 | 170 | 58 | 1 | 409 | 578 | 1 | 139 | 9.16e-42 | 147 |
| MS.gene89582.t1 | AT1G69200 | 29.123 | 285 | 180 | 6 | 294 | 558 | 250 | 532 | 5.02e-37 | 146 |
| MS.gene89582.t1 | AT5G63540 | 40.933 | 193 | 97 | 5 | 16 | 200 | 77 | 260 | 2.30e-32 | 132 |
| MS.gene89582.t1 | AT5G63540 | 40.933 | 193 | 97 | 5 | 16 | 200 | 77 | 260 | 3.12e-32 | 132 |
Find 140 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGTCCCTTCATATTTC+AGG | 0.107336 | 1.1:-51670680 | MS.gene89582:intron |
| TGCAAACCCTCGTGGATTAA+AGG | 0.222703 | 1.1:-51670304 | MS.gene89582:intron |
| GGAACCATAATGGAATATTT+TGG | 0.235298 | 1.1:+51668224 | None:intergenic |
| AAAATTTACCTTTATGATAT+CGG | 0.267627 | 1.1:+51668041 | None:intergenic |
| CCTCAAAATACTAGAGTATT+GGG | 0.268709 | 1.1:-51670125 | MS.gene89582:CDS |
| ATGCCGACTGCCACGTTTGC+AGG | 0.283260 | 1.1:+51668954 | None:intergenic |
| CAGGCCAAAATATTCCATTA+TGG | 0.292003 | 1.1:-51668228 | MS.gene89582:CDS |
| AATATCTTGCTCCTAACTTA+TGG | 0.303753 | 1.1:-51670061 | MS.gene89582:CDS |
| TAGGTTGGAGCAGATGAATT+TGG | 0.306305 | 1.1:-51668526 | MS.gene89582:CDS |
| TCCTAGTGCTGATATGCTTC+TGG | 0.311191 | 1.1:-51668368 | MS.gene89582:CDS |
| GCTTGTTGATACCTGTGTTT+TGG | 0.311203 | 1.1:+51670435 | None:intergenic |
| AGGTTGGAGCAGATGAATTT+GGG | 0.318393 | 1.1:-51668525 | MS.gene89582:CDS |
| CGAATTTGAGATTGGCACTA+TGG | 0.327098 | 1.1:-51668113 | MS.gene89582:CDS |
| ATTGACAAGTTGACGGTAAA+CGG | 0.340168 | 1.1:+51670888 | None:intergenic |
| GATGGTGTTCGTGAAGTCTT+TGG | 0.340373 | 1.1:-51670363 | MS.gene89582:CDS |
| GGAACAAGCCGTGGAGAAAT+AGG | 0.348987 | 1.1:+51670934 | None:intergenic |
| TTTCGTTGCAGCCTTCTGTT+AGG | 0.355686 | 1.1:+51669069 | None:intergenic |
| TCCATCTCTCGTAATTATAA+AGG | 0.356597 | 1.1:+51670163 | None:intergenic |
| AGTGAACTGGTTGTTTGTTT+TGG | 0.359343 | 1.1:-51669044 | MS.gene89582:CDS |
| GCATATCAGCACTAGGATTT+CGG | 0.363456 | 1.1:+51668374 | None:intergenic |
| ATACCTCATCTTCTTGGTAT+TGG | 0.370847 | 1.1:-51670730 | MS.gene89582:CDS |
| CAATCGGAAGTCTCAGGTTC+GGG | 0.374663 | 1.1:+51670913 | None:intergenic |
| ACTTCTCTATTCCATAAGTT+AGG | 0.379694 | 1.1:+51670050 | None:intergenic |
| AGCGTCTTTGCCTGGTTTCA+AGG | 0.380051 | 1.1:-51668994 | MS.gene89582:CDS |
| GAACTGGTATAATGAGCATA+TGG | 0.394625 | 1.1:-51668071 | MS.gene89582:CDS |
| CAAAATAACGTTGATACATC+TGG | 0.394700 | 1.1:-51668478 | MS.gene89582:CDS |
| TCAAACTCATGGAACCATAA+TGG | 0.399197 | 1.1:+51668214 | None:intergenic |
| GATCGGAAAACAGAAACTTC+TGG | 0.409854 | 1.1:+51670773 | None:intergenic |
| TACCGTCAACTTGTCAATCT+CGG | 0.410049 | 1.1:-51670883 | MS.gene89582:CDS |
| CTGCGATCACAATGATGAAC+TGG | 0.410514 | 1.1:-51667288 | MS.gene89582:CDS |
| CATAGTGCCAATCTCAAATT+CGG | 0.415637 | 1.1:+51668114 | None:intergenic |
| TTGACAAGTTGACGGTAAAC+GGG | 0.424404 | 1.1:+51670889 | None:intergenic |
| ACCGTCAACTTGTCAATCTC+GGG | 0.430302 | 1.1:-51670882 | MS.gene89582:CDS |
| CTGATTGTCTTGACGAACTA+GGG | 0.439308 | 1.1:-51670834 | MS.gene89582:CDS |
| CAACAAGCCCCTCCAGGTCC+AGG | 0.439462 | 1.1:-51670420 | MS.gene89582:CDS |
| TCCTCAAAATACTAGAGTAT+TGG | 0.441449 | 1.1:-51670126 | MS.gene89582:CDS |
| TCCTGCACTTTGATGCAAAT+AGG | 0.445703 | 1.1:-51667231 | MS.gene89582:CDS |
| AAACCAGGCAAAGACGCTAT+TGG | 0.448395 | 1.1:+51668999 | None:intergenic |
| GTATGATCCGAATTTGAGAT+TGG | 0.448557 | 1.1:-51668121 | MS.gene89582:CDS |
| AGTGGTATACCTCATCTTCT+TGG | 0.449892 | 1.1:-51670736 | MS.gene89582:CDS |
| TTCAATCCCTGGACCTGGAG+GGG | 0.451763 | 1.1:+51670413 | None:intergenic |
| TCCTTTATAATTACGAGAGA+TGG | 0.453748 | 1.1:-51670164 | MS.gene89582:CDS |
| CAAGGTTGAAGGGCTTCAAT+AGG | 0.455073 | 1.1:+51670327 | None:intergenic |
| TGGCACTATGGCCAACAGCC+TGG | 0.458221 | 1.1:-51668101 | MS.gene89582:CDS |
| GCTGATTGTCTTGACGAACT+AGG | 0.464936 | 1.1:-51670835 | MS.gene89582:CDS |
| ATTTGAAACCTGAAATATGA+AGG | 0.469291 | 1.1:+51670672 | None:intergenic |
| CTGGTGATGCATTTGTTAGC+GGG | 0.470258 | 1.1:-51667483 | MS.gene89582:CDS |
| TTGACGGTAAACGGGGCAAT+CGG | 0.470460 | 1.1:+51670897 | None:intergenic |
| GCAGTCGGCATCTCTAAGTT+AGG | 0.475518 | 1.1:-51668942 | MS.gene89582:CDS |
| AAGCTTCTAATTGTTACTGA+AGG | 0.479008 | 1.1:-51667818 | MS.gene89582:CDS |
| AAGGTATTTGTTGAGCATGC+TGG | 0.479735 | 1.1:-51669747 | MS.gene89582:CDS |
| ATGCCAATAGCGTCTTTGCC+TGG | 0.480095 | 1.1:-51669002 | MS.gene89582:CDS |
| CTGCAACGAAACAAGTGAAC+TGG | 0.480208 | 1.1:-51669057 | MS.gene89582:CDS |
| CTGCTTTCAATCCCTGGACC+TGG | 0.482436 | 1.1:+51670408 | None:intergenic |
| TCCTATTTGCATCAAAGTGC+AGG | 0.485616 | 1.1:+51667230 | None:intergenic |
| CAAGAGTCCTTACCTATGCT+TGG | 0.489278 | 1.1:+51670004 | None:intergenic |
| AGGTAGAGGCTTATATACTT+TGG | 0.489318 | 1.1:+51670954 | None:intergenic |
| AGGCACCTGCTTTCAATCCC+TGG | 0.489668 | 1.1:+51670402 | None:intergenic |
| GGATCTAGCCGATATCATAA+AGG | 0.490697 | 1.1:-51668049 | MS.gene89582:intron |
| GAGGGTTTGCACAAGGTTGA+AGG | 0.493263 | 1.1:+51670316 | None:intergenic |
| GCAATCGGAAGTCTCAGGTT+CGG | 0.495053 | 1.1:+51670912 | None:intergenic |
| CTAATTGTTACTGAAGGGTC+GGG | 0.495709 | 1.1:-51667812 | MS.gene89582:CDS |
| ATACTTTGGATGCGTGTCTA+CGG | 0.496601 | 1.1:+51670968 | None:intergenic |
| GGCACTATGGCCAACAGCCT+GGG | 0.499713 | 1.1:-51668100 | MS.gene89582:CDS |
| TTTCAATCCCTGGACCTGGA+GGG | 0.500383 | 1.1:+51670412 | None:intergenic |
| ACGGGGCAATCGGAAGTCTC+AGG | 0.501039 | 1.1:+51670907 | None:intergenic |
| ACAGCCTGGGATGCTCGAAC+TGG | 0.503210 | 1.1:-51668087 | MS.gene89582:CDS |
| CGTGTCTACGGCGACGGCGA+CGG | 0.506094 | 1.1:+51670980 | None:intergenic |
| CCAGCACCAGTTGTGTCAAA+AGG | 0.513580 | 1.1:+51667502 | None:intergenic |
| GATCTCAAATCTTGTGGTAG+TGG | 0.513628 | 1.1:-51670754 | MS.gene89582:CDS |
| TGAAGTCTTTGGAATGGAGA+TGG | 0.519022 | 1.1:-51670352 | MS.gene89582:CDS |
| ACCCGAGATTGACAAGTTGA+CGG | 0.523923 | 1.1:+51670881 | None:intergenic |
| TATACCAGTTCGAGCATCCC+AGG | 0.528071 | 1.1:+51668083 | None:intergenic |
| CTTTCAATCCCTGGACCTGG+AGG | 0.535473 | 1.1:+51670411 | None:intergenic |
| TCTAATTGTTACTGAAGGGT+CGG | 0.537241 | 1.1:-51667813 | MS.gene89582:CDS |
| AGCTTCTAATTGTTACTGAA+GGG | 0.538689 | 1.1:-51667817 | MS.gene89582:CDS |
| AACTGGTATAATGAGCATAT+GGG | 0.540901 | 1.1:-51668070 | MS.gene89582:CDS |
| TGGATCATGAATCAAACTCA+TGG | 0.541261 | 1.1:+51668203 | None:intergenic |
| TTCATCTGCATTTATAAGCA+AGG | 0.548096 | 1.1:-51668916 | MS.gene89582:intron |
| TTAAAGGCACCTTCTTGATG+AGG | 0.548253 | 1.1:+51668323 | None:intergenic |
| TTCTAATGCCAGCACCCCAT+CGG | 0.553550 | 1.1:-51668443 | MS.gene89582:CDS |
| AGGGTTTGCACAAGGTTGAA+GGG | 0.557314 | 1.1:+51670317 | None:intergenic |
| GTTCGAGCATCCCAGGCTGT+TGG | 0.559305 | 1.1:+51668090 | None:intergenic |
| GAGAGATGGAAGATTGATGC+TGG | 0.559858 | 1.1:-51670150 | MS.gene89582:CDS |
| GATCTCGAAACCACTCTCCA+TGG | 0.560331 | 1.1:-51670697 | MS.gene89582:CDS |
| AGGTATCAACAAGCCCCTCC+AGG | 0.564247 | 1.1:-51670426 | MS.gene89582:CDS |
| GTCTACGGCGACGGCGACGG+CGG | 0.569167 | 1.1:+51670983 | None:intergenic |
| CTAGGAGTTTCCTTGAAACC+AGG | 0.572449 | 1.1:+51668984 | None:intergenic |
| TCAGGTTCGGGAACAAGCCG+TGG | 0.573994 | 1.1:+51670925 | None:intergenic |
| AATAGAGAAGTTAAAGCTGT+AGG | 0.574801 | 1.1:-51670038 | MS.gene89582:CDS |
| CAGGTCCAGGGATTGAAAGC+AGG | 0.576037 | 1.1:-51670407 | MS.gene89582:CDS |
| CATCGGTCAATGTCAACTGC+AGG | 0.580973 | 1.1:+51670382 | None:intergenic |
| GCTCCTGCAAACGTGGCAGT+CGG | 0.582385 | 1.1:-51668957 | MS.gene89582:CDS |
| AATACAACATCATCATCGTA+AGG | 0.587380 | 1.1:+51667866 | None:intergenic |
| CCTGAAATATGAAGGGACCA+TGG | 0.587522 | 1.1:+51670680 | None:intergenic |
| CTCAAAATACTAGAGTATTG+GGG | 0.587799 | 1.1:-51670124 | MS.gene89582:CDS |
| CAACCTTGTGCAAACCCTCG+TGG | 0.588601 | 1.1:-51670312 | MS.gene89582:CDS |
| AGCCGTGGAGAAATAGGTAG+AGG | 0.589860 | 1.1:+51670940 | None:intergenic |
| AGGCAAAGACGCTATTGGCA+TGG | 0.590797 | 1.1:+51669004 | None:intergenic |
| GCTGGTGATGCATTTGTTAG+CGG | 0.592899 | 1.1:-51667484 | MS.gene89582:CDS |
| TCTGATGATCTCCTAACAGA+AGG | 0.595179 | 1.1:-51669080 | MS.gene89582:CDS |
| AATCCACGAGGGTTTGCACA+AGG | 0.595884 | 1.1:+51670309 | None:intergenic |
| AGATGAATTTGGGTATATGT+TGG | 0.599101 | 1.1:-51668515 | MS.gene89582:CDS |
| TTTGAAACCTGAAATATGAA+GGG | 0.600790 | 1.1:+51670673 | None:intergenic |
| AGCCTCTACCTATTTCTCCA+CGG | 0.601157 | 1.1:-51670942 | MS.gene89582:CDS |
| AACAAGCCCCTCCAGGTCCA+GGG | 0.602938 | 1.1:-51670419 | MS.gene89582:CDS |
| AGAGTCTTTAGCAATTCTCA+AGG | 0.603061 | 1.1:+51668158 | None:intergenic |
| TGGATGCGTGTCTACGGCGA+CGG | 0.603148 | 1.1:+51670974 | None:intergenic |
| GACTTCTTGTGTCCAAGCAT+AGG | 0.604267 | 1.1:-51670016 | MS.gene89582:intron |
| GCAAGATGAACATACTTGCA+TGG | 0.608530 | 1.1:+51668183 | None:intergenic |
| TCAAAATACTAGAGTATTGG+GGG | 0.609179 | 1.1:-51670123 | MS.gene89582:CDS |
| TGTGATCGCAGCACATACAT+TGG | 0.610356 | 1.1:+51667300 | None:intergenic |
| TGATTGTAACCTCATCAAGA+AGG | 0.611345 | 1.1:-51668332 | MS.gene89582:intron |
| TGTTCGTGAAGTCTTTGGAA+TGG | 0.611610 | 1.1:-51670358 | MS.gene89582:CDS |
| ACGTTTGCAGGAGCACCACT+AGG | 0.614116 | 1.1:+51668966 | None:intergenic |
| TAGTGGTGCTCCTGCAAACG+TGG | 0.615497 | 1.1:-51668964 | MS.gene89582:CDS |
| TCCGTTGTCCTCCAAAACAC+AGG | 0.617930 | 1.1:-51670446 | MS.gene89582:CDS |
| CGATCACAATGATGAACTGG+GGG | 0.618178 | 1.1:-51667285 | MS.gene89582:CDS |
| TGATTGTCTTGACGAACTAG+GGG | 0.618596 | 1.1:-51670833 | MS.gene89582:CDS |
| GTCGGCATCTCTAAGTTAGG+TGG | 0.623369 | 1.1:-51668939 | MS.gene89582:CDS |
| AAAGACTTCACGAACACCAT+CGG | 0.623440 | 1.1:+51670365 | None:intergenic |
| TGTGTCAAAAGGTTCAACAT+TGG | 0.633430 | 1.1:+51667513 | None:intergenic |
| TGCGATCACAATGATGAACT+GGG | 0.636807 | 1.1:-51667287 | MS.gene89582:CDS |
| ACTACCACAAGATTTGAGAT+CGG | 0.639485 | 1.1:+51670756 | None:intergenic |
| ATTGTTACTGAAGGGTCGGG+AGG | 0.643977 | 1.1:-51667809 | MS.gene89582:CDS |
| TATGAAGGGACCATGGAGAG+TGG | 0.644387 | 1.1:+51670687 | None:intergenic |
| TCCAGAAGCATATCAGCACT+AGG | 0.646459 | 1.1:+51668367 | None:intergenic |
| ATACCAATACCAAGAAGATG+AGG | 0.662772 | 1.1:+51670727 | None:intergenic |
| TGGCAACCTTTAATCCACGA+GGG | 0.663227 | 1.1:+51670298 | None:intergenic |
| TGACAAGTTGACGGTAAACG+GGG | 0.664522 | 1.1:+51670890 | None:intergenic |
| CTGCAGTTGACATTGACCGA+TGG | 0.667088 | 1.1:-51670381 | MS.gene89582:CDS |
| TCAAATTCGGATCATACGAG+AGG | 0.668812 | 1.1:+51668127 | None:intergenic |
| ACGTTGATACATCTGGCATG+CGG | 0.696496 | 1.1:-51668471 | MS.gene89582:CDS |
| CAAAATACTAGAGTATTGGG+GGG | 0.698648 | 1.1:-51670122 | MS.gene89582:CDS |
| GTGGCAACCTTTAATCCACG+AGG | 0.710105 | 1.1:+51670297 | None:intergenic |
| GCGATCACAATGATGAACTG+GGG | 0.717142 | 1.1:-51667286 | MS.gene89582:CDS |
| GGTTTCAAGGAAACTCCTAG+TGG | 0.725966 | 1.1:-51668981 | MS.gene89582:CDS |
| GGACTAGCTGATGATCTCAG+CGG | 0.757827 | 1.1:-51670098 | MS.gene89582:CDS |
| AGGTTGTAGATATTACACCA+AGG | 0.768244 | 1.1:-51667789 | MS.gene89582:intron |
| GATCACAATGATGAACTGGG+GGG | 0.781296 | 1.1:-51667284 | MS.gene89582:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAAAAGTTTAATAAA+TGG | - | chr1.1:51668755-51668774 | MS.gene89582:intron | 10.0% |
| !! | AAGATAAAAGTTTAATAAAT+GGG | - | chr1.1:51668756-51668775 | MS.gene89582:intron | 10.0% |
| !!! | ACTTATTTGATTTAATTTTT+TGG | + | chr1.1:51668633-51668652 | None:intergenic | 10.0% |
| !!! | ATTTAATTTAACAATAGAAA+AGG | + | chr1.1:51669520-51669539 | None:intergenic | 10.0% |
| !!! | TGTCTTTTTTTTTTTTTTTT+TGG | - | chr1.1:51668417-51668436 | MS.gene89582:CDS | 10.0% |
| !!! | TTTAATTTAACAATAGAAAA+GGG | + | chr1.1:51669519-51669538 | None:intergenic | 10.0% |
| !! | AAAATTTACCTTTATGATAT+CGG | + | chr1.1:51670175-51670194 | None:intergenic | 15.0% |
| !! | ATTATACAGAATTAAACAAT+AGG | + | chr1.1:51669952-51669971 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTGAAACAGATT+TGG | - | chr1.1:51669368-51669387 | MS.gene89582:intron | 15.0% |
| !!! | TTTGATTTAATTTTTTGGTA+TGG | + | chr1.1:51668628-51668647 | None:intergenic | 15.0% |
| !! | AAATAGAAACAAATCAAACA+TGG | + | chr1.1:51669419-51669438 | None:intergenic | 20.0% |
| !! | AGTAAATACATGATATTTCT+AGG | + | chr1.1:51669559-51669578 | None:intergenic | 20.0% |
| !! | CTAATTAGCATAACTTAATA+AGG | - | chr1.1:51668999-51669018 | MS.gene89582:CDS | 20.0% |
| !! | GCAAAGAAAATAATAAAATG+AGG | + | chr1.1:51670507-51670526 | None:intergenic | 20.0% |
| !! | TAATAACCATGATTATAGAT+AGG | - | chr1.1:51668300-51668319 | MS.gene89582:intron | 20.0% |
| !! | TAGAAAAAAAATTGTGTGTT+TGG | - | chr1.1:51670829-51670848 | MS.gene89582:CDS | 20.0% |
| !! | TATTTATTGACATGGTTATT+TGG | - | chr1.1:51669334-51669353 | MS.gene89582:intron | 20.0% |
| !! | TGTAAAGTTGCAAAATAATT+TGG | - | chr1.1:51668602-51668621 | MS.gene89582:intron | 20.0% |
| !!! | ATTAAACAATAGGTCTTTTA+TGG | + | chr1.1:51669942-51669961 | None:intergenic | 20.0% |
| !!! | TATAATTTAATACTGATTGC+AGG | - | chr1.1:51669966-51669985 | MS.gene89582:intron | 20.0% |
| !!! | TTAACTCAGATTTTAATTGT+CGG | - | chr1.1:51670465-51670484 | MS.gene89582:CDS | 20.0% |
| !!! | TTTTGAATTCAACTATAACA+TGG | + | chr1.1:51668901-51668920 | None:intergenic | 20.0% |
| ! | AAATCTGAGTTAAATGACTT+TGG | + | chr1.1:51670458-51670477 | None:intergenic | 25.0% |
| ! | AATAGAAGAATCATTTCACT+CGG | + | chr1.1:51668974-51668993 | None:intergenic | 25.0% |
| ! | AATCAACCTATCTATAATCA+TGG | + | chr1.1:51668309-51668328 | None:intergenic | 25.0% |
| ! | AATTTGAGTGAATCTCAAAT+TGG | - | chr1.1:51667644-51667663 | MS.gene89582:intron | 25.0% |
| ! | ATCTAACTCATTCAAATACT+AGG | + | chr1.1:51668544-51668563 | None:intergenic | 25.0% |
| ! | ATGTATGTATTGAGATGAAA+AGG | + | chr1.1:51667949-51667968 | None:intergenic | 25.0% |
| ! | GAATTACCTCAAAAATACTT+GGG | + | chr1.1:51670779-51670798 | None:intergenic | 25.0% |
| ! | GTTAAATTTCTGCAAAAAAG+TGG | - | chr1.1:51667407-51667426 | MS.gene89582:intron | 25.0% |
| ! | GTTATTACTATATGATCACA+TGG | + | chr1.1:51668287-51668306 | None:intergenic | 25.0% |
| ! | TAAACAGAGATGGAAATTAA+AGG | + | chr1.1:51669909-51669928 | None:intergenic | 25.0% |
| ! | TAACAATAGAAAAGGGAAAA+AGG | + | chr1.1:51669512-51669531 | None:intergenic | 25.0% |
| ! | TAATTGTAAAAAAAGCCGAT+GGG | + | chr1.1:51669788-51669807 | None:intergenic | 25.0% |
| ! | TCTATGTCTATTTATTGACA+TGG | - | chr1.1:51669326-51669345 | MS.gene89582:intron | 25.0% |
| ! | TGAATTACCTCAAAAATACT+TGG | + | chr1.1:51670780-51670799 | None:intergenic | 25.0% |
| !! | AATTTTTGTGCAGGATTTTA+AGG | - | chr1.1:51670662-51670681 | MS.gene89582:intron | 25.0% |
| !! | ATTTGAAACCTGAAATATGA+AGG | + | chr1.1:51667544-51667563 | None:intergenic | 25.0% |
| !! | ATTTTTGTGCAGGATTTTAA+GGG | - | chr1.1:51670663-51670682 | MS.gene89582:intron | 25.0% |
| !! | TGATTACTAAATTTTTGTGC+AGG | - | chr1.1:51670653-51670672 | MS.gene89582:intron | 25.0% |
| !! | TTTGAAACCTGAAATATGAA+GGG | + | chr1.1:51667543-51667562 | None:intergenic | 25.0% |
| !!! | CTACAAGAAGTTTTATTCTT+AGG | + | chr1.1:51669593-51669612 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGAAGAGAGAAA+AGG | - | chr1.1:51667353-51667372 | MS.gene89582:intron | 25.0% |
| !!! | TGTTTTGGTGAAATGTTAAT+AGG | - | chr1.1:51669184-51669203 | MS.gene89582:intron | 25.0% |
| !!! | TTTTTTACAATTAGAGCTGA+TGG | - | chr1.1:51669795-51669814 | MS.gene89582:intron | 25.0% |
| AAAAGGGAAAAAGGTAGAAT+GGG | + | chr1.1:51669503-51669522 | None:intergenic | 30.0% | |
| AACTATGCTCCTATATGATA+TGG | - | chr1.1:51667681-51667700 | MS.gene89582:intron | 30.0% | |
| AACTGGTATAATGAGCATAT+GGG | - | chr1.1:51670143-51670162 | MS.gene89582:CDS | 30.0% | |
| AACTTAATAAGGATGTTCTG+TGG | - | chr1.1:51669010-51669029 | MS.gene89582:CDS | 30.0% | |
| AAGCTTCTAATTGTTACTGA+AGG | - | chr1.1:51670395-51670414 | MS.gene89582:CDS | 30.0% | |
| AATACAACATCATCATCGTA+AGG | + | chr1.1:51670350-51670369 | None:intergenic | 30.0% | |
| AATAGAGAAGTTAAAGCTGT+AGG | - | chr1.1:51668175-51668194 | MS.gene89582:CDS | 30.0% | |
| AATATCTTGCTCCTAACTTA+TGG | - | chr1.1:51668152-51668171 | MS.gene89582:CDS | 30.0% | |
| AATTGTAAAAAAAGCCGATG+GGG | + | chr1.1:51669787-51669806 | None:intergenic | 30.0% | |
| ACTTCTCTATTCCATAAGTT+AGG | + | chr1.1:51668166-51668185 | None:intergenic | 30.0% | |
| AGATGAATTTGGGTATATGT+TGG | - | chr1.1:51669698-51669717 | MS.gene89582:intron | 30.0% | |
| AGCTTCTAATTGTTACTGAA+GGG | - | chr1.1:51670396-51670415 | MS.gene89582:CDS | 30.0% | |
| ATAGAAGAATCATTTCACTC+GGG | + | chr1.1:51668973-51668992 | None:intergenic | 30.0% | |
| ATCCAATGTCCATATCATAT+AGG | + | chr1.1:51667693-51667712 | None:intergenic | 30.0% | |
| ATTTCTGAGTATCATCATTG+TGG | + | chr1.1:51668385-51668404 | None:intergenic | 30.0% | |
| CAAAATAACGTTGATACATC+TGG | - | chr1.1:51669735-51669754 | MS.gene89582:CDS | 30.0% | |
| CAGATATCTTTACACATTCT+AGG | - | chr1.1:51670798-51670817 | MS.gene89582:CDS | 30.0% | |
| CATATTATATCAGTCTGTCA+TGG | - | chr1.1:51668339-51668358 | MS.gene89582:CDS | 30.0% | |
| CATGACAGACTGATATAATA+TGG | + | chr1.1:51668341-51668360 | None:intergenic | 30.0% | |
| CCATCTCTGTTTATAAAATG+TGG | - | chr1.1:51669916-51669935 | MS.gene89582:intron | 30.0% | |
| CTAATTGTAAAAAAAGCCGA+TGG | + | chr1.1:51669789-51669808 | None:intergenic | 30.0% | |
| GAAGAAAGAATGATATGCAA+TGG | + | chr1.1:51670241-51670260 | None:intergenic | 30.0% | |
| GATCACAACTAAATTCACAA+TGG | + | chr1.1:51668804-51668823 | None:intergenic | 30.0% | |
| GTAGTAGTATTCTGAATGTT+AGG | - | chr1.1:51669609-51669628 | MS.gene89582:intron | 30.0% | |
| TACAAGTAGTTTATGAAGCT+TGG | - | chr1.1:51668921-51668940 | MS.gene89582:CDS | 30.0% | |
| TCCATCTCTCGTAATTATAA+AGG | + | chr1.1:51668053-51668072 | None:intergenic | 30.0% | |
| TCCTCAAAATACTAGAGTAT+TGG | - | chr1.1:51668087-51668106 | MS.gene89582:CDS | 30.0% | |
| TCCTTTATAATTACGAGAGA+TGG | - | chr1.1:51668049-51668068 | MS.gene89582:intron | 30.0% | |
| TGTGAATTTAGTTGTGATCT+AGG | - | chr1.1:51668805-51668824 | MS.gene89582:intron | 30.0% | |
| TTAGGAATGTGAATCTATGT+TGG | - | chr1.1:51669627-51669646 | MS.gene89582:intron | 30.0% | |
| TTCATCTGCATTTATAAGCA+AGG | - | chr1.1:51669297-51669316 | MS.gene89582:intron | 30.0% | |
| ! | CCACATTTTATAAACAGAGA+TGG | + | chr1.1:51669919-51669938 | None:intergenic | 30.0% |
| ! | CCTCAAAATACTAGAGTATT+GGG | - | chr1.1:51668088-51668107 | MS.gene89582:CDS | 30.0% |
| ! | TTGTGGCAGAATTTTAAATG+CGG | + | chr1.1:51668368-51668387 | None:intergenic | 30.0% |
| !! | ACTTTTTCTTGTCAATGCTT+GGG | + | chr1.1:51668507-51668526 | None:intergenic | 30.0% |
| !! | ATGAAGTTATTTTGTGTGAC+AGG | - | chr1.1:51670857-51670876 | MS.gene89582:CDS | 30.0% |
| !! | CTCAAAATACTAGAGTATTG+GGG | - | chr1.1:51668089-51668108 | MS.gene89582:CDS | 30.0% |
| !! | GCTTGCTGTTATTAATGTAT+TGG | - | chr1.1:51667722-51667741 | MS.gene89582:intron | 30.0% |
| !! | GGAACCATAATGGAATATTT+TGG | + | chr1.1:51669992-51670011 | None:intergenic | 30.0% |
| !! | TCAAAATACTAGAGTATTGG+GGG | - | chr1.1:51668090-51668109 | MS.gene89582:CDS | 30.0% |
| !!! | ATTACTTTTTTGACTTGTGG+TGG | - | chr1.1:51670320-51670339 | MS.gene89582:CDS | 30.0% |
| !!! | CAGATTTTAATTGTCGGAAT+AGG | - | chr1.1:51670471-51670490 | MS.gene89582:intron | 30.0% |
| !!! | GAGATTACTTTTTTGACTTG+TGG | - | chr1.1:51670317-51670336 | MS.gene89582:CDS | 30.0% |
| !!! | GTTGGTTCAAGTTTTTTTAC+TGG | + | chr1.1:51669092-51669111 | None:intergenic | 30.0% |
| !!! | TACTTTTTCTTGTCAATGCT+TGG | + | chr1.1:51668508-51668527 | None:intergenic | 30.0% |
| AAAGGGAAAAAGGTAGAATG+GGG | + | chr1.1:51669502-51669521 | None:intergenic | 35.0% | |
| AAGCTTGGCTATTAGCTATT+AGG | - | chr1.1:51668936-51668955 | MS.gene89582:CDS | 35.0% | |
| ACAATTTCGACACTCAATGA+CGG | - | chr1.1:51670583-51670602 | MS.gene89582:intron | 35.0% | |
| ACCTGCAAAACATGAATTGT+TGG | + | chr1.1:51669110-51669129 | None:intergenic | 35.0% | |
| AGAGTCTTTAGCAATTCTCA+AGG | + | chr1.1:51670058-51670077 | None:intergenic | 35.0% | |
| AGGTAGAGGCTTATATACTT+TGG | + | chr1.1:51667262-51667281 | None:intergenic | 35.0% | |
| AGGTTGTAGATATTACACCA+AGG | - | chr1.1:51670424-51670443 | MS.gene89582:CDS | 35.0% | |
| ATACCAATACCAAGAAGATG+AGG | + | chr1.1:51667489-51667508 | None:intergenic | 35.0% | |
| ATACCTCATCTTCTTGGTAT+TGG | - | chr1.1:51667483-51667502 | MS.gene89582:CDS | 35.0% | |
| ATGGGAAGTTATAGTTGGTT+AGG | + | chr1.1:51669474-51669493 | None:intergenic | 35.0% | |
| CAGGCCAAAATATTCCATTA+TGG | - | chr1.1:51669985-51670004 | MS.gene89582:intron | 35.0% | |
| CATAGTGCCAATCTCAAATT+CGG | + | chr1.1:51670102-51670121 | None:intergenic | 35.0% | |
| CTCCTATATGATATGGACAT+TGG | - | chr1.1:51667688-51667707 | MS.gene89582:intron | 35.0% | |
| GAAAAGGGAAAAAGGTAGAA+TGG | + | chr1.1:51669504-51669523 | None:intergenic | 35.0% | |
| GAACTGGTATAATGAGCATA+TGG | - | chr1.1:51670142-51670161 | MS.gene89582:CDS | 35.0% | |
| GGTTTCTTGTTACTATCTTC+AGG | - | chr1.1:51669389-51669408 | MS.gene89582:intron | 35.0% | |
| TAACGTGGTTTCTATTCGAT+GGG | + | chr1.1:51669448-51669467 | None:intergenic | 35.0% | |
| TCAAACTCATGGAACCATAA+TGG | + | chr1.1:51670002-51670021 | None:intergenic | 35.0% | |
| TCATCAATTCTTCTGCATGA+AGG | - | chr1.1:51668848-51668867 | MS.gene89582:intron | 35.0% | |
| TCTAATTGTTACTGAAGGGT+CGG | - | chr1.1:51670400-51670419 | MS.gene89582:CDS | 35.0% | |
| TGATTGTAACCTCATCAAGA+AGG | - | chr1.1:51669881-51669900 | MS.gene89582:intron | 35.0% | |
| TGGAAATGGGAAGTTATAGT+TGG | + | chr1.1:51669479-51669498 | None:intergenic | 35.0% | |
| TGGATCATGAATCAAACTCA+TGG | + | chr1.1:51670013-51670032 | None:intergenic | 35.0% | |
| TGTGTCAAAAGGTTCAACAT+TGG | + | chr1.1:51670703-51670722 | None:intergenic | 35.0% | |
| TTAACGTGGTTTCTATTCGA+TGG | + | chr1.1:51669449-51669468 | None:intergenic | 35.0% | |
| TTGCTCTTTATTCTGATGAG+TGG | - | chr1.1:51670523-51670542 | MS.gene89582:intron | 35.0% | |
| ! | AACTCCTTACCATGTGTTTT+AGG | - | chr1.1:51669668-51669687 | MS.gene89582:intron | 35.0% |
| ! | ACCAACAATTCATGTTTTGC+AGG | - | chr1.1:51669106-51669125 | MS.gene89582:intron | 35.0% |
| ! | ACTACCACAAGATTTGAGAT+CGG | + | chr1.1:51667460-51667479 | None:intergenic | 35.0% |
| ! | AGTGAACTGGTTGTTTGTTT+TGG | - | chr1.1:51669169-51669188 | MS.gene89582:intron | 35.0% |
| ! | ATTGACAAGTTGACGGTAAA+CGG | + | chr1.1:51667328-51667347 | None:intergenic | 35.0% |
| ! | CCCAATACTCTAGTATTTTG+AGG | + | chr1.1:51668091-51668110 | None:intergenic | 35.0% |
| ! | GCTGTTATTAATGTATTGGC+AGG | - | chr1.1:51667726-51667745 | MS.gene89582:intron | 35.0% |
| ! | GTATGATCCGAATTTGAGAT+TGG | - | chr1.1:51670092-51670111 | MS.gene89582:CDS | 35.0% |
| ! | TGGCGAAATATAACGCTTTT+TGG | + | chr1.1:51670896-51670915 | None:intergenic | 35.0% |
| ! | TTGTGATCTAGGATATGAAC+TGG | - | chr1.1:51668816-51668835 | MS.gene89582:intron | 35.0% |
| ! | TTTTCCGATCTCAAATCTTG+TGG | - | chr1.1:51667453-51667472 | MS.gene89582:CDS | 35.0% |
| ! | TTTTTACTGGTAGCACTCTA+GGG | + | chr1.1:51669079-51669098 | None:intergenic | 35.0% |
| !! | CAAAATACTAGAGTATTGGG+GGG | - | chr1.1:51668091-51668110 | MS.gene89582:CDS | 35.0% |
| !! | GATTTTAAGGGCAAAGTTAG+AGG | - | chr1.1:51670675-51670694 | MS.gene89582:intron | 35.0% |
| !! | TAGTTGGTTAGGTTTTAACG+TGG | + | chr1.1:51669463-51669482 | None:intergenic | 35.0% |
| !! | TTATTTTGTGTGACAGGATG+AGG | - | chr1.1:51670863-51670882 | MS.gene89582:CDS | 35.0% |
| !! | TTCTGACCCAAGTATTTTTG+AGG | - | chr1.1:51670770-51670789 | MS.gene89582:CDS | 35.0% |
| !!! | TTTTTTACTGGTAGCACTCT+AGG | + | chr1.1:51669080-51669099 | None:intergenic | 35.0% |
| AAAGACTTCACGAACACCAT+CGG | + | chr1.1:51667851-51667870 | None:intergenic | 40.0% | |
| AGGTTGGAGCAGATGAATTT+GGG | - | chr1.1:51669688-51669707 | MS.gene89582:intron | 40.0% | |
| AGTGGTATACCTCATCTTCT+TGG | - | chr1.1:51667477-51667496 | MS.gene89582:CDS | 40.0% | |
| ATACTTTGGATGCGTGTCTA+CGG | + | chr1.1:51667248-51667267 | None:intergenic | 40.0% | |
| CAGGTTGTAAAACTTGAGCA+AGG | - | chr1.1:51670610-51670629 | MS.gene89582:intron | 40.0% | |
| CCAACCTAAAACACATGGTA+AGG | + | chr1.1:51669675-51669694 | None:intergenic | 40.0% | |
| CCATAAACAGAGGAAGATCT+AGG | - | chr1.1:51668252-51668271 | MS.gene89582:intron | 40.0% | |
| CCTAGATCTTCCTCTGTTTA+TGG | + | chr1.1:51668255-51668274 | None:intergenic | 40.0% | |
| CTAATTGTTACTGAAGGGTC+GGG | - | chr1.1:51670401-51670420 | MS.gene89582:CDS | 40.0% | |
| CTGATTGTCTTGACGAACTA+GGG | - | chr1.1:51667379-51667398 | MS.gene89582:intron | 40.0% | |
| GATCGGAAAACAGAAACTTC+TGG | + | chr1.1:51667443-51667462 | None:intergenic | 40.0% | |
| GATCTCAAATCTTGTGGTAG+TGG | - | chr1.1:51667459-51667478 | MS.gene89582:CDS | 40.0% | |
| GCAAGATGAACATACTTGCA+TGG | + | chr1.1:51670033-51670052 | None:intergenic | 40.0% | |
| GCATATCAGCACTAGGATTT+CGG | + | chr1.1:51669842-51669861 | None:intergenic | 40.0% | |
| GGATCTAGCCGATATCATAA+AGG | - | chr1.1:51670164-51670183 | MS.gene89582:CDS | 40.0% | |
| TACCGTCAACTTGTCAATCT+CGG | - | chr1.1:51667330-51667349 | MS.gene89582:CDS | 40.0% | |
| TAGGTAAGGACCATAAACAG+AGG | - | chr1.1:51668242-51668261 | MS.gene89582:intron | 40.0% | |
| TCAAATTCGGATCATACGAG+AGG | + | chr1.1:51670089-51670108 | None:intergenic | 40.0% | |
| TCCTATTTGCATCAAAGTGC+AGG | + | chr1.1:51670986-51671005 | None:intergenic | 40.0% | |
| TCCTGCACTTTGATGCAAAT+AGG | - | chr1.1:51670982-51671001 | MS.gene89582:CDS | 40.0% | |
| TCTGATGATCTCCTAACAGA+AGG | - | chr1.1:51669133-51669152 | MS.gene89582:intron | 40.0% | |
| TGAAGGTCATCATGGATTCA+TGG | - | chr1.1:51668865-51668884 | MS.gene89582:intron | 40.0% | |
| TGATTGTCTTGACGAACTAG+GGG | - | chr1.1:51667380-51667399 | MS.gene89582:intron | 40.0% | |
| TGCGATCACAATGATGAACT+GGG | - | chr1.1:51670926-51670945 | MS.gene89582:CDS | 40.0% | |
| TTATGGTCCTTACCTATGCT+TGG | + | chr1.1:51668238-51668257 | None:intergenic | 40.0% | |
| ! | AAGGTATTTGTTGAGCATGC+TGG | - | chr1.1:51668466-51668485 | MS.gene89582:CDS | 40.0% |
| ! | ACAGATCTATTGCTGCTTGT+AGG | - | chr1.1:51668018-51668037 | MS.gene89582:intron | 40.0% |
| ! | CGAATTTGAGATTGGCACTA+TGG | - | chr1.1:51670100-51670119 | MS.gene89582:CDS | 40.0% |
| ! | GCATCTTTTGTAGGTAATGC+AGG | + | chr1.1:51670960-51670979 | None:intergenic | 40.0% |
| ! | GTTGAACCTTTTGACACAAC+TGG | - | chr1.1:51670705-51670724 | MS.gene89582:CDS | 40.0% |
| ! | TAGGTTGGAGCAGATGAATT+TGG | - | chr1.1:51669687-51669706 | MS.gene89582:intron | 40.0% |
| ! | TGTTCGTGAAGTCTTTGGAA+TGG | - | chr1.1:51667855-51667874 | MS.gene89582:CDS | 40.0% |
| ! | TTGACAAGTTGACGGTAAAC+GGG | + | chr1.1:51667327-51667346 | None:intergenic | 40.0% |
| !! | CCTTACCATGTGTTTTAGGT+TGG | - | chr1.1:51669672-51669691 | MS.gene89582:intron | 40.0% |
| !! | GCTTGTTGATACCTGTGTTT+TGG | + | chr1.1:51667781-51667800 | None:intergenic | 40.0% |
| !! | TGAAGTCTTTGGAATGGAGA+TGG | - | chr1.1:51667861-51667880 | MS.gene89582:CDS | 40.0% |
| !! | TGATGAGTGGACTGAAATGT+TGG | - | chr1.1:51670536-51670555 | MS.gene89582:intron | 40.0% |
| !! | TGTTGATACCTGTGTTTTGG+AGG | + | chr1.1:51667778-51667797 | None:intergenic | 40.0% |
| !! | TTAAAGGCACCTTCTTGATG+AGG | + | chr1.1:51669893-51669912 | None:intergenic | 40.0% |
| !!! | TTTTGGTGCTAAATCGTCTC+TGG | - | chr1.1:51668434-51668453 | MS.gene89582:CDS | 40.0% |
| AAACCAGGCAAAGACGCTAT+TGG | + | chr1.1:51669217-51669236 | None:intergenic | 45.0% | |
| AAGGTAGAATGGGGTGGAAA+TGG | + | chr1.1:51669493-51669512 | None:intergenic | 45.0% | |
| ACCGTCAACTTGTCAATCTC+GGG | - | chr1.1:51667331-51667350 | MS.gene89582:CDS | 45.0% | |
| ACGTTGATACATCTGGCATG+CGG | - | chr1.1:51669742-51669761 | MS.gene89582:CDS | 45.0% | |
| AGGGTTTGCACAAGGTTGAA+GGG | + | chr1.1:51667899-51667918 | None:intergenic | 45.0% | |
| AGGTAGAATGGGGTGGAAAT+GGG | + | chr1.1:51669492-51669511 | None:intergenic | 45.0% | |
| CAAGAGTCCTTACCTATGCT+TGG | + | chr1.1:51668212-51668231 | None:intergenic | 45.0% | |
| CAAGGTTGAAGGGCTTCAAT+AGG | + | chr1.1:51667889-51667908 | None:intergenic | 45.0% | |
| CCATGGTCCCTTCATATTTC+AGG | - | chr1.1:51667533-51667552 | MS.gene89582:CDS | 45.0% | |
| CCTGAAATATGAAGGGACCA+TGG | + | chr1.1:51667536-51667555 | None:intergenic | 45.0% | |
| CGATCACAATGATGAACTGG+GGG | - | chr1.1:51670928-51670947 | MS.gene89582:CDS | 45.0% | |
| CTAGGAGTTTCCTTGAAACC+AGG | + | chr1.1:51669232-51669251 | None:intergenic | 45.0% | |
| CTATTCTCCTCTCCGAGTAA+GGG | - | chr1.1:51667987-51668006 | MS.gene89582:intron | 45.0% | |
| CTGCAACGAAACAAGTGAAC+TGG | - | chr1.1:51669156-51669175 | MS.gene89582:intron | 45.0% | |
| CTGCGATCACAATGATGAAC+TGG | - | chr1.1:51670925-51670944 | MS.gene89582:CDS | 45.0% | |
| CTGCTCCAACCTAAAACACA+TGG | + | chr1.1:51669680-51669699 | None:intergenic | 45.0% | |
| CTGTCAAGTTCACCCTTACT+CGG | + | chr1.1:51668002-51668021 | None:intergenic | 45.0% | |
| CTTCTGCATGAAGGTCATCA+TGG | - | chr1.1:51668857-51668876 | MS.gene89582:intron | 45.0% | |
| CTTGTGTCCAAGCATAGGTA+AGG | - | chr1.1:51668202-51668221 | MS.gene89582:CDS | 45.0% | |
| GACTTCTTGTGTCCAAGCAT+AGG | - | chr1.1:51668197-51668216 | MS.gene89582:CDS | 45.0% | |
| GAGAGATGGAAGATTGATGC+TGG | - | chr1.1:51668063-51668082 | MS.gene89582:CDS | 45.0% | |
| GAGATGAAAAGGATGTCTCG+TGG | + | chr1.1:51667938-51667957 | None:intergenic | 45.0% | |
| GATCACAATGATGAACTGGG+GGG | - | chr1.1:51670929-51670948 | MS.gene89582:CDS | 45.0% | |
| GATGGTGTTCGTGAAGTCTT+TGG | - | chr1.1:51667850-51667869 | MS.gene89582:CDS | 45.0% | |
| GCGATCACAATGATGAACTG+GGG | - | chr1.1:51670927-51670946 | MS.gene89582:CDS | 45.0% | |
| GCTGATTGTCTTGACGAACT+AGG | - | chr1.1:51667378-51667397 | MS.gene89582:intron | 45.0% | |
| GGTCATCATGGATTCATGGT+TGG | - | chr1.1:51668869-51668888 | MS.gene89582:intron | 45.0% | |
| GGTTTCAAGGAAACTCCTAG+TGG | - | chr1.1:51669232-51669251 | MS.gene89582:intron | 45.0% | |
| TGACTTTGGCAAGCTTACCT+TGG | + | chr1.1:51670444-51670463 | None:intergenic | 45.0% | |
| TGCTAAATCGTCTCTGGCTA+TGG | - | chr1.1:51668440-51668459 | MS.gene89582:CDS | 45.0% | |
| TGGCAACCTTTAATCCACGA+GGG | + | chr1.1:51667918-51667937 | None:intergenic | 45.0% | |
| TGTGATCGCAGCACATACAT+TGG | + | chr1.1:51670916-51670935 | None:intergenic | 45.0% | |
| TTTCGTTGCAGCCTTCTGTT+AGG | + | chr1.1:51669147-51669166 | None:intergenic | 45.0% | |
| ! | ACAGAGGAAGATCTAGGACT+AGG | - | chr1.1:51668258-51668277 | MS.gene89582:intron | 45.0% |
| ! | ACCCGAGATTGACAAGTTGA+CGG | + | chr1.1:51667335-51667354 | None:intergenic | 45.0% |
| ! | AGCCTCTACCTATTTCTCCA+CGG | - | chr1.1:51667271-51667290 | MS.gene89582:CDS | 45.0% |
| ! | CTGGTGATGCATTTGTTAGC+GGG | - | chr1.1:51670730-51670749 | MS.gene89582:CDS | 45.0% |
| ! | GCTGGTGATGCATTTGTTAG+CGG | - | chr1.1:51670729-51670748 | MS.gene89582:CDS | 45.0% |
| ! | TCCAGAAGCATATCAGCACT+AGG | + | chr1.1:51669849-51669868 | None:intergenic | 45.0% |
| ! | TGACAAGTTGACGGTAAACG+GGG | + | chr1.1:51667326-51667345 | None:intergenic | 45.0% |
| ! | TGCAAACCCTCGTGGATTAA+AGG | - | chr1.1:51667909-51667928 | MS.gene89582:CDS | 45.0% |
| ! | TGCAGGACAGCATCTTTTGT+AGG | + | chr1.1:51670969-51670988 | None:intergenic | 45.0% |
| !! | AATACTAGAGTATTGGGGGG+AGG | - | chr1.1:51668094-51668113 | MS.gene89582:CDS | 45.0% |
| !! | TCCTAGTGCTGATATGCTTC+TGG | - | chr1.1:51669845-51669864 | MS.gene89582:intron | 45.0% |
| !!! | ACCTGTGTTTTGGAGGACAA+CGG | + | chr1.1:51667771-51667790 | None:intergenic | 45.0% |
| !! | TATTATTATAATTATTGTTA+CGG | - | chr1.1:51667590-51667609 | MS.gene89582:intron | 5.0% |
| AAAAAAAGCCGATGGGGTGC+TGG | + | chr1.1:51669781-51669800 | None:intergenic | 50.0% | |
| AAGTTCACCCTTACTCGGAG+AGG | + | chr1.1:51667997-51668016 | None:intergenic | 50.0% | |
| AATCCACGAGGGTTTGCACA+AGG | + | chr1.1:51667907-51667926 | None:intergenic | 50.0% | |
| AGCCGTGGAGAAATAGGTAG+AGG | + | chr1.1:51667276-51667295 | None:intergenic | 50.0% | |
| AGCGTCTTTGCCTGGTTTCA+AGG | - | chr1.1:51669219-51669238 | MS.gene89582:intron | 50.0% | |
| AGGCAAAGACGCTATTGGCA+TGG | + | chr1.1:51669212-51669231 | None:intergenic | 50.0% | |
| ATGCCAATAGCGTCTTTGCC+TGG | - | chr1.1:51669211-51669230 | MS.gene89582:intron | 50.0% | |
| ATTGTTACTGAAGGGTCGGG+AGG | - | chr1.1:51670404-51670423 | MS.gene89582:CDS | 50.0% | |
| CAATCGGAAGTCTCAGGTTC+GGG | + | chr1.1:51667303-51667322 | None:intergenic | 50.0% | |
| CATCGGTCAATGTCAACTGC+AGG | + | chr1.1:51667834-51667853 | None:intergenic | 50.0% | |
| CCAGCACCAGTTGTGTCAAA+AGG | + | chr1.1:51670714-51670733 | None:intergenic | 50.0% | |
| CTGCAGTTGACATTGACCGA+TGG | - | chr1.1:51667832-51667851 | MS.gene89582:CDS | 50.0% | |
| GAGGGTTTGCACAAGGTTGA+AGG | + | chr1.1:51667900-51667919 | None:intergenic | 50.0% | |
| GATCTCGAAACCACTCTCCA+TGG | - | chr1.1:51667516-51667535 | MS.gene89582:CDS | 50.0% | |
| GCAATCGGAAGTCTCAGGTT+CGG | + | chr1.1:51667304-51667323 | None:intergenic | 50.0% | |
| GCAGTCGGCATCTCTAAGTT+AGG | - | chr1.1:51669271-51669290 | MS.gene89582:intron | 50.0% | |
| GCTATTCTCCTCTCCGAGTA+AGG | - | chr1.1:51667986-51668005 | MS.gene89582:intron | 50.0% | |
| GGAACAAGCCGTGGAGAAAT+AGG | + | chr1.1:51667282-51667301 | None:intergenic | 50.0% | |
| GGACTCTTGTGTCCAAGCAT+AGG | - | chr1.1:51668223-51668242 | MS.gene89582:CDS | 50.0% | |
| GGGAAAAAGGTAGAATGGGG+TGG | + | chr1.1:51669499-51669518 | None:intergenic | 50.0% | |
| GTCGGCATCTCTAAGTTAGG+TGG | - | chr1.1:51669274-51669293 | MS.gene89582:intron | 50.0% | |
| GTGGCAACCTTTAATCCACG+AGG | + | chr1.1:51667919-51667938 | None:intergenic | 50.0% | |
| TATACCAGTTCGAGCATCCC+AGG | + | chr1.1:51670133-51670152 | None:intergenic | 50.0% | |
| TATGAAGGGACCATGGAGAG+TGG | + | chr1.1:51667529-51667548 | None:intergenic | 50.0% | |
| TCCGTTGTCCTCCAAAACAC+AGG | - | chr1.1:51667767-51667786 | MS.gene89582:intron | 50.0% | |
| TCGTCTCTGGCTATGGTTGA+AGG | - | chr1.1:51668447-51668466 | MS.gene89582:CDS | 50.0% | |
| TTCTAATGCCAGCACCCCAT+CGG | - | chr1.1:51669770-51669789 | MS.gene89582:intron | 50.0% | |
| TTGACGGTAAACGGGGCAAT+CGG | + | chr1.1:51667319-51667338 | None:intergenic | 50.0% | |
| TTTCAATCCCTGGACCTGGA+GGG | + | chr1.1:51667804-51667823 | None:intergenic | 50.0% | |
| ! | CCTTTTGACACAACTGGTGC+TGG | - | chr1.1:51670711-51670730 | MS.gene89582:CDS | 50.0% |
| !! | GACACTCAATGACGGATAGC+AGG | - | chr1.1:51670591-51670610 | MS.gene89582:intron | 50.0% |
| !! | GGACTAGCTGATGATCTCAG+CGG | - | chr1.1:51668115-51668134 | MS.gene89582:CDS | 50.0% |
| AGGCACCTGCTTTCAATCCC+TGG | + | chr1.1:51667814-51667833 | None:intergenic | 55.0% | |
| AGGTATCAACAAGCCCCTCC+AGG | - | chr1.1:51667787-51667806 | MS.gene89582:intron | 55.0% | |
| CAACCTTGTGCAAACCCTCG+TGG | - | chr1.1:51667901-51667920 | MS.gene89582:CDS | 55.0% | |
| CAGGTCCAGGGATTGAAAGC+AGG | - | chr1.1:51667806-51667825 | MS.gene89582:CDS | 55.0% | |
| CTGCTTTCAATCCCTGGACC+TGG | + | chr1.1:51667808-51667827 | None:intergenic | 55.0% | |
| CTTTCAATCCCTGGACCTGG+AGG | + | chr1.1:51667805-51667824 | None:intergenic | 55.0% | |
| TAGTGGTGCTCCTGCAAACG+TGG | - | chr1.1:51669249-51669268 | MS.gene89582:intron | 55.0% | |
| TTCAATCCCTGGACCTGGAG+GGG | + | chr1.1:51667803-51667822 | None:intergenic | 55.0% | |
| !! | ACGTTTGCAGGAGCACCACT+AGG | + | chr1.1:51669250-51669269 | None:intergenic | 55.0% |
| AACAAGCCCCTCCAGGTCCA+GGG | - | chr1.1:51667794-51667813 | MS.gene89582:CDS | 60.0% | |
| ACAGCCTGGGATGCTCGAAC+TGG | - | chr1.1:51670126-51670145 | MS.gene89582:CDS | 60.0% | |
| ACGGGGCAATCGGAAGTCTC+AGG | + | chr1.1:51667309-51667328 | None:intergenic | 60.0% | |
| GCTCCTGCAAACGTGGCAGT+CGG | - | chr1.1:51669256-51669275 | MS.gene89582:intron | 60.0% | |
| GGCACTATGGCCAACAGCCT+GGG | - | chr1.1:51670113-51670132 | MS.gene89582:CDS | 60.0% | |
| GTTCGAGCATCCCAGGCTGT+TGG | + | chr1.1:51670126-51670145 | None:intergenic | 60.0% | |
| TCAGGTTCGGGAACAAGCCG+TGG | + | chr1.1:51667291-51667310 | None:intergenic | 60.0% | |
| TGGATGCGTGTCTACGGCGA+CGG | + | chr1.1:51667242-51667261 | None:intergenic | 60.0% | |
| TGGCACTATGGCCAACAGCC+TGG | - | chr1.1:51670112-51670131 | MS.gene89582:CDS | 60.0% | |
| ! | ATGCCGACTGCCACGTTTGC+AGG | + | chr1.1:51669262-51669281 | None:intergenic | 60.0% |
| CAACAAGCCCCTCCAGGTCC+AGG | - | chr1.1:51667793-51667812 | MS.gene89582:CDS | 65.0% | |
| CGTGTCTACGGCGACGGCGA+CGG | + | chr1.1:51667236-51667255 | None:intergenic | 70.0% | |
| GTCTACGGCGACGGCGACGG+CGG | + | chr1.1:51667233-51667252 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 51667213 | 51671022 | 51667213 | ID=MS.gene89582 |
| chr1.1 | mRNA | 51667213 | 51671022 | 51667213 | ID=MS.gene89582.t1;Parent=MS.gene89582 |
| chr1.1 | exon | 51670681 | 51671022 | 51670681 | ID=MS.gene89582.t1.exon1;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51670681 | 51671022 | 51670681 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51670305 | 51670487 | 51670305 | ID=MS.gene89582.t1.exon2;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51670305 | 51670487 | 51670305 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51670017 | 51670195 | 51670017 | ID=MS.gene89582.t1.exon3;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51670017 | 51670195 | 51670017 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51669711 | 51669766 | 51669711 | ID=MS.gene89582.t1.exon4;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51669711 | 51669766 | 51669711 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51668917 | 51669107 | 51668917 | ID=MS.gene89582.t1.exon5;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51668917 | 51669107 | 51668917 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51668333 | 51668545 | 51668333 | ID=MS.gene89582.t1.exon6;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51668333 | 51668545 | 51668333 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51668050 | 51668247 | 51668050 | ID=MS.gene89582.t1.exon7;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51668050 | 51668247 | 51668050 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51667790 | 51667930 | 51667790 | ID=MS.gene89582.t1.exon8;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51667790 | 51667930 | 51667790 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51667444 | 51667560 | 51667444 | ID=MS.gene89582.t1.exon9;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51667444 | 51667560 | 51667444 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| chr1.1 | exon | 51667213 | 51667356 | 51667213 | ID=MS.gene89582.t1.exon10;Parent=MS.gene89582.t1 |
| chr1.1 | CDS | 51667213 | 51667356 | 51667213 | ID=cds.MS.gene89582.t1;Parent=MS.gene89582.t1 |
| Gene Sequence |
| Protein sequence |
