Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89613.t1 | XP_003629384.1 | 100 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 1.30E-264 | 921.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89613.t1 | Q54XK2 | 72.2 | 472 | 130 | 1 | 4 | 475 | 2 | 472 | 7.7e-197 | 688.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89613.t1 | G7LD29 | 100.0 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 9.5e-265 | 921.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032325 | MS.gene89613 | PPI |
| MS.gene007852 | MS.gene89613 | PPI |
| MS.gene007853 | MS.gene89613 | PPI |
| MS.gene32242 | MS.gene89613 | PPI |
| MS.gene38994 | MS.gene89613 | PPI |
| MS.gene02479 | MS.gene89613 | PPI |
| MS.gene37094 | MS.gene89613 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89613.t1 | MTR_8g076770 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| MS.gene89613.t1 | MTR_8g058330 | 99.580 | 476 | 2 | 0 | 1 | 476 | 1 | 476 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89613.t1 | AT2G34250 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 911 |
| MS.gene89613.t1 | AT2G34250 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 911 |
| MS.gene89613.t1 | AT2G34250 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 911 |
| MS.gene89613.t1 | AT1G29310 | 93.277 | 476 | 31 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| MS.gene89613.t1 | AT1G29310 | 93.277 | 476 | 31 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| MS.gene89613.t1 | AT1G78720 | 91.158 | 475 | 41 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| MS.gene89613.t1 | AT1G78720 | 91.158 | 475 | 41 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| MS.gene89613.t1 | AT1G78720 | 90.737 | 475 | 41 | 2 | 1 | 475 | 1 | 472 | 0.0 | 880 |
Find 126 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAGATGGGTGGTGGGTTT+AGG | 0.136040 | 8.3:-27342769 | None:intergenic |
| GCAGTTGCCTATGTTCTTTC+AGG | 0.153997 | 8.3:-27341858 | MS.gene89613:CDS |
| CGAGCATTCTTTGACCTTAC+AGG | 0.193127 | 8.3:+27341305 | None:intergenic |
| ATCACTCCTATTGTCACTTC+TGG | 0.196349 | 8.3:-27342518 | MS.gene89613:CDS |
| GCCAGTGAGCTTGGCTTCTT+TGG | 0.202930 | 8.3:-27339665 | MS.gene89613:CDS |
| TAAGATGGGTGGTGGGTTTA+GGG | 0.208117 | 8.3:-27342768 | None:intergenic |
| TGGGCTCGTCATGCAGCTTT+TGG | 0.253908 | 8.3:-27342498 | MS.gene89613:CDS |
| TTTACAGTGAAAACATTATA+TGG | 0.278546 | 8.3:-27341544 | MS.gene89613:intron |
| AGCTCCACGTCCACTGTTAA+TGG | 0.280671 | 8.3:+27341502 | None:intergenic |
| TGTAGTCAGCTTCCTCTATA+TGG | 0.291177 | 8.3:-27342626 | MS.gene89613:CDS |
| TATATGACCTTCTCTCTAAA+TGG | 0.311984 | 8.3:+27342680 | None:intergenic |
| ACTATATCACTGCGCCTTCC+AGG | 0.327568 | 8.3:-27340994 | MS.gene89613:intron |
| CTGTCAGCAGTCTGAACTTC+GGG | 0.330487 | 8.3:+27342710 | None:intergenic |
| CTTGGAAGTATATCACAATT+AGG | 0.332365 | 8.3:+27341345 | None:intergenic |
| TTAGACGAGCTTCTTCAAAA+AGG | 0.351609 | 8.3:-27341747 | MS.gene89613:CDS |
| AAAGGATATGGTCTTGGTTC+GGG | 0.354944 | 8.3:-27341729 | MS.gene89613:CDS |
| AAGAGCAGACTGAAGAATAA+TGG | 0.359294 | 8.3:+27341232 | None:intergenic |
| TCGTAAATCTGTTGGGGAAA+TGG | 0.359545 | 8.3:-27341069 | MS.gene89613:CDS |
| AGATATTAGTCGCTATGAAT+AGG | 0.367590 | 8.3:+27341700 | None:intergenic |
| TTTATGGGAGCAATAGGTTC+AGG | 0.371834 | 8.3:-27339752 | MS.gene89613:CDS |
| GAGGTATAGAACAGTTTGAT+TGG | 0.375522 | 8.3:+27341263 | None:intergenic |
| CTTTCTGCAAGTTCGATTCA+CGG | 0.380631 | 8.3:+27339849 | None:intergenic |
| AAAAGGATATGGTCTTGGTT+CGG | 0.400084 | 8.3:-27341730 | MS.gene89613:CDS |
| AACTTCATCGTAAATCTGTT+GGG | 0.400705 | 8.3:-27341076 | MS.gene89613:CDS |
| AAATGGAAGGAATCTGAATA+TGG | 0.402051 | 8.3:-27341052 | MS.gene89613:CDS |
| TATTCATAGCGACTAATATC+TGG | 0.405102 | 8.3:-27341698 | MS.gene89613:intron |
| CAGGTGCAGACCCGTTCTAT+TGG | 0.409752 | 8.3:-27342589 | MS.gene89613:CDS |
| GATATTAGTCGCTATGAATA+GGG | 0.410097 | 8.3:+27341701 | None:intergenic |
| ATCCCCACTGCTGCAGCATT+CGG | 0.412466 | 8.3:-27339812 | MS.gene89613:CDS |
| CAACAATGTGCGAGAGGATC+GGG | 0.412985 | 8.3:-27342450 | MS.gene89613:CDS |
| GCATTCGGAGGCATTTGTAT+TGG | 0.413794 | 8.3:-27339797 | MS.gene89613:CDS |
| TATGTTCTTTCAGGGATGTA+TGG | 0.425856 | 8.3:-27341849 | MS.gene89613:CDS |
| TCACTCCTATTGTCACTTCT+GGG | 0.435136 | 8.3:-27342517 | MS.gene89613:CDS |
| GTGCTTTGTTCTCTAAAACT+TGG | 0.436590 | 8.3:-27340792 | MS.gene89613:CDS |
| GAATTTGCAGGAACAACAAA+TGG | 0.436694 | 8.3:-27339885 | MS.gene89613:intron |
| AGAGCAGACTGAAGAATAAT+GGG | 0.438369 | 8.3:+27341233 | None:intergenic |
| CGTGGAACTGTCATGGAGCT+TGG | 0.440078 | 8.3:-27342542 | MS.gene89613:CDS |
| GCAAGGAGATTTGTCACATT+GGG | 0.440920 | 8.3:+27341383 | None:intergenic |
| CTGTTCTAGTTATCAACAAA+TGG | 0.444560 | 8.3:+27341450 | None:intergenic |
| CTGGGAGATAAAGTAGAGAT+TGG | 0.445182 | 8.3:+27341205 | None:intergenic |
| TAGTTTGATAAGATGGGTGG+TGG | 0.446861 | 8.3:-27342776 | None:intergenic |
| CAGTTGCCTATGTTCTTTCA+GGG | 0.447094 | 8.3:-27341857 | MS.gene89613:CDS |
| AGGTCTCTGGTTCATCTGCT+AGG | 0.447601 | 8.3:-27340765 | MS.gene89613:CDS |
| AAAACTTGGATTGAGGTCTC+TGG | 0.449518 | 8.3:-27340778 | MS.gene89613:CDS |
| GTAGTCAGCTTCCTCTATAT+GGG | 0.450305 | 8.3:-27342625 | MS.gene89613:CDS |
| GGAGCAATAGGTTCAGGGAC+AGG | 0.451698 | 8.3:-27339746 | MS.gene89613:CDS |
| ACGTCCACTGTTAATGGTGG+TGG | 0.452014 | 8.3:+27341508 | None:intergenic |
| AAAGAATGCTCGTGGACAGC+AGG | 0.458072 | 8.3:-27341294 | MS.gene89613:CDS |
| AAGGAAAGAGCCAGTGAGCT+TGG | 0.465558 | 8.3:-27339674 | MS.gene89613:CDS |
| TTCAGGGATGTATGGTAGTG+TGG | 0.482405 | 8.3:-27341841 | MS.gene89613:CDS |
| AAACTTCATCGTAAATCTGT+TGG | 0.487952 | 8.3:-27341077 | MS.gene89613:CDS |
| TATGGGATACACTCGACAAC+AGG | 0.491096 | 8.3:-27342608 | MS.gene89613:CDS |
| GTTCTCTAAAACTTGGATTG+AGG | 0.493225 | 8.3:-27340785 | MS.gene89613:CDS |
| CCTCCGAATGCTGCAGCAGT+GGG | 0.494724 | 8.3:+27339809 | None:intergenic |
| GCAAAACCACACGGAAACCT+TGG | 0.494750 | 8.3:+27341327 | None:intergenic |
| ACCAAAGAAGCCAAGCTCAC+TGG | 0.495667 | 8.3:+27339664 | None:intergenic |
| TGAAGTTTCCACTGTACTTA+CGG | 0.495825 | 8.3:+27341092 | None:intergenic |
| CAATCTCTACTTTATCTCCC+AGG | 0.496621 | 8.3:-27341204 | MS.gene89613:intron |
| ACGAGCCCAGAAGTGACAAT+AGG | 0.497800 | 8.3:+27342512 | None:intergenic |
| CCTGTCAGCAGTCTGAACTT+CGG | 0.503278 | 8.3:+27342709 | None:intergenic |
| AACGGAGCACAGAAGCTACT+TGG | 0.503865 | 8.3:-27341903 | MS.gene89613:CDS |
| TTATGGGAGCAATAGGTTCA+GGG | 0.506128 | 8.3:-27339751 | MS.gene89613:CDS |
| AAGAATAATGGGCATGTTGG+AGG | 0.506203 | 8.3:+27341244 | None:intergenic |
| TATGGTAGTGTGGGCCAACT+TGG | 0.506306 | 8.3:-27341831 | MS.gene89613:CDS |
| TAGTATGCAATACCACCAAC+AGG | 0.506516 | 8.3:+27341013 | None:intergenic |
| CTGAAGAATAATGGGCATGT+TGG | 0.515561 | 8.3:+27341241 | None:intergenic |
| GCCTCCGAATGCTGCAGCAG+TGG | 0.517678 | 8.3:+27339808 | None:intergenic |
| GTCGAGTGTATCCCATATAG+AGG | 0.521776 | 8.3:+27342614 | None:intergenic |
| GGTCACTCAATTCCTGTTGG+TGG | 0.521827 | 8.3:-27341025 | MS.gene89613:CDS |
| GTACTTTGAAACATTTGAGA+AGG | 0.527766 | 8.3:-27339693 | MS.gene89613:CDS |
| GGATGTTGCAAAGCAATTGA+AGG | 0.529914 | 8.3:-27340743 | MS.gene89613:intron |
| CTGCAGCAGTGGGGATGTAT+CGG | 0.533364 | 8.3:+27339819 | None:intergenic |
| TAACACGCATCCAATAGAAC+GGG | 0.538866 | 8.3:+27342579 | None:intergenic |
| GAACAACAAATGGTGATGCC+TGG | 0.539031 | 8.3:-27339875 | MS.gene89613:CDS |
| CTAATTGTGATATACTTCCA+AGG | 0.539046 | 8.3:-27341344 | MS.gene89613:CDS |
| GGTCTCTGGTTCATCTGCTA+GGG | 0.539177 | 8.3:-27340764 | MS.gene89613:CDS |
| AAGTTCGATTCACGGTGTCC+AGG | 0.541165 | 8.3:+27339857 | None:intergenic |
| ACAACAATGTGCGAGAGGAT+CGG | 0.542537 | 8.3:-27342451 | MS.gene89613:CDS |
| TCAGGGATGTATGGTAGTGT+GGG | 0.544571 | 8.3:-27341840 | MS.gene89613:CDS |
| CCGAAGTTCAGACTGCTGAC+AGG | 0.544729 | 8.3:-27342709 | MS.gene89613:CDS |
| GAACAAAGCATGGAAAGGAT+TGG | 0.546371 | 8.3:+27340840 | None:intergenic |
| CAGTTCCACGGTTTGAAGCA+AGG | 0.547496 | 8.3:+27342555 | None:intergenic |
| TATTGGTGCTCTGACAGTAT+TGG | 0.548932 | 8.3:-27339780 | MS.gene89613:CDS |
| CAGTGAAAACATTATATGGA+AGG | 0.562189 | 8.3:-27341540 | MS.gene89613:CDS |
| AGTTTGATAAGATGGGTGGT+GGG | 0.564289 | 8.3:-27342775 | None:intergenic |
| AGCAAGGAGATTTGTCACAT+TGG | 0.565195 | 8.3:+27341382 | None:intergenic |
| AAATCTGTTGGGGAAATGGA+AGG | 0.566664 | 8.3:-27341065 | MS.gene89613:CDS |
| GAGCAATAGGTTCAGGGACA+GGG | 0.568251 | 8.3:-27339745 | MS.gene89613:CDS |
| GGACGTGGAGCTGAGTTTGA+AGG | 0.571398 | 8.3:-27341491 | MS.gene89613:CDS |
| TCGGGAAGGAACGAGAGAAA+CGG | 0.578024 | 8.3:+27342728 | None:intergenic |
| CCCACTGCTGCAGCATTCGG+AGG | 0.578252 | 8.3:-27339809 | MS.gene89613:CDS |
| TCACATTGGGAAGATTCTGC+CGG | 0.580213 | 8.3:+27341396 | None:intergenic |
| CAAGCTCCATGACAGTTCCA+CGG | 0.581913 | 8.3:+27342543 | None:intergenic |
| GAACATGTCTCTTACCTGGA+AGG | 0.587398 | 8.3:+27340980 | None:intergenic |
| GTTATCCTTGCTTCAAACCG+TGG | 0.587811 | 8.3:-27342560 | MS.gene89613:CDS |
| TGGATCAAAGATTATTGAAG+TGG | 0.589065 | 8.3:-27342474 | MS.gene89613:CDS |
| TAGCATTTCCGACTCCAAGT+TGG | 0.589902 | 8.3:+27341817 | None:intergenic |
| ACACAAGATAGAACAAAGCA+TGG | 0.593205 | 8.3:+27340830 | None:intergenic |
| CGTCCACTGTTAATGGTGGT+GGG | 0.594920 | 8.3:+27341509 | None:intergenic |
| TTCAAACCGTGGAACTGTCA+TGG | 0.595719 | 8.3:-27342549 | MS.gene89613:CDS |
| ATACATCCCTGAAAGAACAT+AGG | 0.595738 | 8.3:+27341851 | None:intergenic |
| ACCTTACAGGCAAAACCACA+CGG | 0.598007 | 8.3:+27341318 | None:intergenic |
| ACTTCATCGTAAATCTGTTG+GGG | 0.598993 | 8.3:-27341075 | MS.gene89613:CDS |
| ACCACCATTAACAGTGGACG+TGG | 0.603265 | 8.3:-27341506 | MS.gene89613:CDS |
| GAAAGTGCCATTTAGAGAGA+AGG | 0.605927 | 8.3:-27342687 | MS.gene89613:CDS |
| AGATAGAACAAAGCATGGAA+AGG | 0.607824 | 8.3:+27340835 | None:intergenic |
| GTAAGGTCAAAGAATGCTCG+TGG | 0.613013 | 8.3:-27341302 | MS.gene89613:CDS |
| AAGGAATCTGAATATGGAGG+TGG | 0.616063 | 8.3:-27341046 | MS.gene89613:CDS |
| ATAACACGCATCCAATAGAA+CGG | 0.617882 | 8.3:+27342578 | None:intergenic |
| AGTGTGGGCCAACTTGGAGT+CGG | 0.619136 | 8.3:-27341825 | MS.gene89613:CDS |
| GGTGGTCACTCAATTCCTGT+TGG | 0.620974 | 8.3:-27341028 | MS.gene89613:CDS |
| CAAGGTTCGTGCTCTTCGTG+AGG | 0.624324 | 8.3:-27341426 | MS.gene89613:CDS |
| AAGAATGCTCGTGGACAGCA+GGG | 0.628905 | 8.3:-27341293 | MS.gene89613:CDS |
| GGAAGATCAAGACAGTAGCA+AGG | 0.630553 | 8.3:+27341366 | None:intergenic |
| CAGCAGTCTGAACTTCGGGA+AGG | 0.631153 | 8.3:+27342714 | None:intergenic |
| TGGAAGGAATCTGAATATGG+AGG | 0.634041 | 8.3:-27341049 | MS.gene89613:CDS |
| AAAAGAGCTGGACAATGATG+AGG | 0.635714 | 8.3:+27341793 | None:intergenic |
| CTTCTCCACCGTAAGTACAG+TGG | 0.641971 | 8.3:-27341100 | MS.gene89613:CDS |
| TCCACGTCCACTGTTAATGG+TGG | 0.651847 | 8.3:+27341505 | None:intergenic |
| GTTGATAACTAGAACAGACA+AGG | 0.670921 | 8.3:-27341444 | MS.gene89613:CDS |
| AGTCCCACCACCATTAACAG+TGG | 0.677883 | 8.3:-27341512 | MS.gene89613:CDS |
| AGTGGACAACAATGTGCGAG+AGG | 0.687698 | 8.3:-27342456 | MS.gene89613:CDS |
| ATACTTCCAAGGTTTCCGTG+TGG | 0.697491 | 8.3:-27341333 | MS.gene89613:CDS |
| ACATAGTTTGATAAGATGGG+TGG | 0.698995 | 8.3:-27342779 | None:intergenic |
| CTCCGAATGCTGCAGCAGTG+GGG | 0.715264 | 8.3:+27339810 | None:intergenic |
| AGTTTCCACTGTACTTACGG+TGG | 0.718747 | 8.3:+27341095 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTATAAAATATAATTTATT+TGG | - | chr8.3:27340389-27340408 | MS.gene89613:intron | 10.0% |
| !!! | AGTTTATAATTTAACTTTAA+AGG | - | chr8.3:27342000-27342019 | MS.gene89613:intron | 10.0% |
| !! | CTAAATTAGTATACAATAAA+AGG | + | chr8.3:27341495-27341514 | None:intergenic | 15.0% |
| !!! | ATAATTAAAAGCACAAATAT+TGG | + | chr8.3:27341805-27341824 | None:intergenic | 15.0% |
| !! | ATCATAAAACTATTATTACC+TGG | + | chr8.3:27341239-27341258 | None:intergenic | 20.0% |
| !! | CAAAAGAATTATATAAATGG+TGG | + | chr8.3:27341528-27341547 | None:intergenic | 20.0% |
| !! | CACCAAAAGAATTATATAAA+TGG | + | chr8.3:27341531-27341550 | None:intergenic | 20.0% |
| !! | TCATAAAACTATTATTACCT+GGG | + | chr8.3:27341238-27341257 | None:intergenic | 20.0% |
| !! | TTAGAAACCAATAATACTTT+GGG | - | chr8.3:27341953-27341972 | MS.gene89613:intron | 20.0% |
| !! | TTATATTGCAAATACGTTAT+AGG | + | chr8.3:27341761-27341780 | None:intergenic | 20.0% |
| !! | TTTACAGTGAAAACATTATA+TGG | - | chr8.3:27340878-27340897 | MS.gene89613:intron | 20.0% |
| !!! | ATAATAGTTTTATGATAGGT+TGG | - | chr8.3:27341243-27341262 | MS.gene89613:CDS | 20.0% |
| !!! | CACCATTTATATAATTCTTT+TGG | - | chr8.3:27341526-27341545 | MS.gene89613:CDS | 20.0% |
| !!! | GGTAATAATAGTTTTATGAT+AGG | - | chr8.3:27341239-27341258 | MS.gene89613:CDS | 20.0% |
| !!! | TAATAGTTTTATGATAGGTT+GGG | - | chr8.3:27341244-27341263 | MS.gene89613:CDS | 20.0% |
| !!! | TCTTCTAAGTTTTAGATAAA+AGG | + | chr8.3:27340844-27340863 | None:intergenic | 20.0% |
| !!! | TGATTTAAATACCTTTTCTA+TGG | - | chr8.3:27340492-27340511 | MS.gene89613:intron | 20.0% |
| !!! | TTTTATGAAGTTTTTGATGT+TGG | - | chr8.3:27342348-27342367 | MS.gene89613:intron | 20.0% |
| ! | AAAATTTCAAAGACTAAAGC+TGG | + | chr8.3:27340782-27340801 | None:intergenic | 25.0% |
| ! | AAAGAAAGACACTTACAAAA+GGG | + | chr8.3:27339998-27340017 | None:intergenic | 25.0% |
| ! | ATAGGTTTGGGAAAAAATAA+AGG | + | chr8.3:27341743-27341762 | None:intergenic | 25.0% |
| ! | ATCAGTTATGTGTTTACATT+AGG | - | chr8.3:27340237-27340256 | MS.gene89613:intron | 25.0% |
| ! | CTTAGAAACCAATAATACTT+TGG | - | chr8.3:27341952-27341971 | MS.gene89613:intron | 25.0% |
| ! | GGATAAATAAACAGACATAT+TGG | + | chr8.3:27342279-27342298 | None:intergenic | 25.0% |
| ! | GGATTATCGTAAGTATAATT+TGG | + | chr8.3:27341467-27341486 | None:intergenic | 25.0% |
| ! | TAAGGATCCTAAGAAAAATT+TGG | + | chr8.3:27342246-27342265 | None:intergenic | 25.0% |
| ! | TGTGTAATATCTGCTATATT+AGG | - | chr8.3:27342485-27342504 | MS.gene89613:CDS | 25.0% |
| !! | TATGAGGTTTTCACTATTTA+GGG | - | chr8.3:27340442-27340461 | MS.gene89613:intron | 25.0% |
| !! | TTATGAGGTTTTCACTATTT+AGG | - | chr8.3:27340441-27340460 | MS.gene89613:intron | 25.0% |
| !! | TTCTGTTCCAAATTTTTCTT+AGG | - | chr8.3:27342236-27342255 | MS.gene89613:intron | 25.0% |
| !! | TTCTTAACCCAAAGTATTAT+TGG | + | chr8.3:27341963-27341982 | None:intergenic | 25.0% |
| !! | TTTTATACCCCTTTAAATGA+AGG | + | chr8.3:27340378-27340397 | None:intergenic | 25.0% |
| !!! | ATACATGTTTTTGAATTTGC+AGG | - | chr8.3:27342525-27342544 | MS.gene89613:CDS | 25.0% |
| !!! | CAAAGTATTATTGGTTTCTA+AGG | + | chr8.3:27341954-27341973 | None:intergenic | 25.0% |
| !!! | CATATTGGTTTCTTACTTTA+AGG | + | chr8.3:27342264-27342283 | None:intergenic | 25.0% |
| !!! | GGAACTCTGTTTTATTAATA+TGG | - | chr8.3:27342428-27342447 | MS.gene89613:intron | 25.0% |
| !!! | GTGCTTTTAATTATTAGAGA+AGG | - | chr8.3:27341811-27341830 | MS.gene89613:CDS | 25.0% |
| !!! | TATCTCATATATGCTTTTTC+AGG | - | chr8.3:27342132-27342151 | MS.gene89613:intron | 25.0% |
| AAACTTCATCGTAAATCTGT+TGG | - | chr8.3:27341345-27341364 | MS.gene89613:CDS | 30.0% | |
| AAATGGAAGGAATCTGAATA+TGG | - | chr8.3:27341370-27341389 | MS.gene89613:CDS | 30.0% | |
| AACTTCATCGTAAATCTGTT+GGG | - | chr8.3:27341346-27341365 | MS.gene89613:CDS | 30.0% | |
| AAGTATTATATCACGTCAAC+AGG | + | chr8.3:27341890-27341909 | None:intergenic | 30.0% | |
| ACATGCATTCCTTCATTTAA+AGG | - | chr8.3:27340366-27340385 | MS.gene89613:intron | 30.0% | |
| AGATATTAGTCGCTATGAAT+AGG | + | chr8.3:27340725-27340744 | None:intergenic | 30.0% | |
| AGCAAAATATTAGCTAGACT+TGG | - | chr8.3:27341916-27341935 | MS.gene89613:intron | 30.0% | |
| AGTATTATATCACGTCAACA+GGG | + | chr8.3:27341889-27341908 | None:intergenic | 30.0% | |
| ATGCATTCCTTCATTTAAAG+GGG | - | chr8.3:27340368-27340387 | MS.gene89613:intron | 30.0% | |
| CAAAGAAAGACACTTACAAA+AGG | + | chr8.3:27339999-27340018 | None:intergenic | 30.0% | |
| CAGTGAAAACATTATATGGA+AGG | - | chr8.3:27340882-27340901 | MS.gene89613:intron | 30.0% | |
| CATGCATTCCTTCATTTAAA+GGG | - | chr8.3:27340367-27340386 | MS.gene89613:intron | 30.0% | |
| CTAATTGTGATATACTTCCA+AGG | - | chr8.3:27341078-27341097 | MS.gene89613:CDS | 30.0% | |
| GATATTAGTCGCTATGAATA+GGG | + | chr8.3:27340724-27340743 | None:intergenic | 30.0% | |
| GCAAAATATTAGCTAGACTT+GGG | - | chr8.3:27341917-27341936 | MS.gene89613:intron | 30.0% | |
| GCATATATGAGATAACTTAC+AGG | + | chr8.3:27342126-27342145 | None:intergenic | 30.0% | |
| TATAGCAGATATTACACACT+CGG | + | chr8.3:27342483-27342502 | None:intergenic | 30.0% | |
| TATATGACCTTCTCTCTAAA+TGG | + | chr8.3:27339745-27339764 | None:intergenic | 30.0% | |
| TATTCATAGCGACTAATATC+TGG | - | chr8.3:27340724-27340743 | MS.gene89613:intron | 30.0% | |
| TGCAAATACGTTATAGGTTT+GGG | + | chr8.3:27341755-27341774 | None:intergenic | 30.0% | |
| TGGATCAAAGATTATTGAAG+TGG | - | chr8.3:27339948-27339967 | MS.gene89613:intron | 30.0% | |
| TTGCAAATACGTTATAGGTT+TGG | + | chr8.3:27341756-27341775 | None:intergenic | 30.0% | |
| ! | AGTATACAATAAAAGGCATG+TGG | + | chr8.3:27341488-27341507 | None:intergenic | 30.0% |
| ! | ATTTTGCAGTTTAGCTGATA+TGG | - | chr8.3:27341556-27341575 | MS.gene89613:intron | 30.0% |
| ! | CTGTTCTAGTTATCAACAAA+TGG | + | chr8.3:27340975-27340994 | None:intergenic | 30.0% |
| ! | CTTGGAAGTATATCACAATT+AGG | + | chr8.3:27341080-27341099 | None:intergenic | 30.0% |
| ! | GATCTCTCTTTTCATTTTCT+TGG | - | chr8.3:27339771-27339790 | MS.gene89613:CDS | 30.0% |
| !! | GTACTTTGAAACATTTGAGA+AGG | - | chr8.3:27342729-27342748 | MS.gene89613:CDS | 30.0% |
| !!! | ACAGTATTGGCAGATTTTAT+GGG | - | chr8.3:27342655-27342674 | MS.gene89613:CDS | 30.0% |
| AACTCATATGCTTCCTATTC+TGG | + | chr8.3:27342164-27342183 | None:intergenic | 35.0% | |
| AAGAGCAGACTGAAGAATAA+TGG | + | chr8.3:27341193-27341212 | None:intergenic | 35.0% | |
| AATCATGTGATCGATGTAAC+AGG | + | chr8.3:27340184-27340203 | None:intergenic | 35.0% | |
| ACACAAGATAGAACAAAGCA+TGG | + | chr8.3:27341595-27341614 | None:intergenic | 35.0% | |
| ACTTCATCGTAAATCTGTTG+GGG | - | chr8.3:27341347-27341366 | MS.gene89613:CDS | 35.0% | |
| AGACATTGTTGCATACACTA+TGG | + | chr8.3:27342300-27342319 | None:intergenic | 35.0% | |
| AGAGCAGACTGAAGAATAAT+GGG | + | chr8.3:27341192-27341211 | None:intergenic | 35.0% | |
| AGATAAAAGGTAATATGCCC+TGG | + | chr8.3:27340831-27340850 | None:intergenic | 35.0% | |
| AGATAGAACAAAGCATGGAA+AGG | + | chr8.3:27341590-27341609 | None:intergenic | 35.0% | |
| ATAACACGCATCCAATAGAA+CGG | + | chr8.3:27339847-27339866 | None:intergenic | 35.0% | |
| ATACATCCCTGAAAGAACAT+AGG | + | chr8.3:27340574-27340593 | None:intergenic | 35.0% | |
| ATCAGAGTATATCCTACTCT+AGG | - | chr8.3:27340098-27340117 | MS.gene89613:intron | 35.0% | |
| ATGAAGGAATGCATGTCAAA+TGG | + | chr8.3:27340362-27340381 | None:intergenic | 35.0% | |
| ATTATTAGAGAAGGTTCACC+TGG | - | chr8.3:27341820-27341839 | MS.gene89613:CDS | 35.0% | |
| CAGCTAAAATTACTGACGTT+GGG | + | chr8.3:27340062-27340081 | None:intergenic | 35.0% | |
| CATAAAACACCACAGAAAAG+TGG | + | chr8.3:27342335-27342354 | None:intergenic | 35.0% | |
| CGTTTGATAAATCCTAGAGT+AGG | + | chr8.3:27340113-27340132 | None:intergenic | 35.0% | |
| CTGTTATATCTAGTTGAGTC+AGG | - | chr8.3:27340149-27340168 | MS.gene89613:intron | 35.0% | |
| CTTCAAAAAGGATATGGTCT+TGG | - | chr8.3:27340687-27340706 | MS.gene89613:intron | 35.0% | |
| GAATTTGCAGGAACAACAAA+TGG | - | chr8.3:27342537-27342556 | MS.gene89613:CDS | 35.0% | |
| GAGCTTCTTCAAAAAGGATA+TGG | - | chr8.3:27340681-27340700 | MS.gene89613:intron | 35.0% | |
| GAGGTATAGAACAGTTTGAT+TGG | + | chr8.3:27341162-27341181 | None:intergenic | 35.0% | |
| GCACAAATATTGGAGATAAC+AGG | + | chr8.3:27341795-27341814 | None:intergenic | 35.0% | |
| GGATTTATCAAACGTGTGTA+TGG | - | chr8.3:27340119-27340138 | MS.gene89613:intron | 35.0% | |
| GTAGCAATTATTAACCACCA+GGG | - | chr8.3:27340811-27340830 | MS.gene89613:CDS | 35.0% | |
| TATCTGCTGTTGTCTTTATG+AGG | - | chr8.3:27340426-27340445 | MS.gene89613:intron | 35.0% | |
| TATGTTCTTTCAGGGATGTA+TGG | - | chr8.3:27340573-27340592 | MS.gene89613:intron | 35.0% | |
| TGAAGTTTCCACTGTACTTA+CGG | + | chr8.3:27341333-27341352 | None:intergenic | 35.0% | |
| TGTAGCAATTATTAACCACC+AGG | - | chr8.3:27340810-27340829 | MS.gene89613:CDS | 35.0% | |
| TTAGACGAGCTTCTTCAAAA+AGG | - | chr8.3:27340675-27340694 | MS.gene89613:intron | 35.0% | |
| ! | AAAAGGATATGGTCTTGGTT+CGG | - | chr8.3:27340692-27340711 | MS.gene89613:intron | 35.0% |
| ! | AGAATAGGAAGCATATGAGT+TGG | - | chr8.3:27342163-27342182 | MS.gene89613:intron | 35.0% |
| ! | TACCTTTTCTATGGCAGAAA+CGG | - | chr8.3:27340501-27340520 | MS.gene89613:intron | 35.0% |
| !! | GTGCTTTGTTCTCTAAAACT+TGG | - | chr8.3:27341630-27341649 | MS.gene89613:intron | 35.0% |
| !! | GTTCTCTAAAACTTGGATTG+AGG | - | chr8.3:27341637-27341656 | MS.gene89613:intron | 35.0% |
| !! | GTTGATAACTAGAACAGACA+AGG | - | chr8.3:27340978-27340997 | MS.gene89613:intron | 35.0% |
| !! | TGAGTTGGTTAGTTTAGAAC+AGG | - | chr8.3:27342178-27342197 | MS.gene89613:intron | 35.0% |
| !! | TTTCAGGAGTATTCCAGAAT+AGG | - | chr8.3:27342148-27342167 | MS.gene89613:intron | 35.0% |
| !! | TTTGATGTTGGTTCAGAGTT+AGG | - | chr8.3:27342360-27342379 | MS.gene89613:intron | 35.0% |
| !! | TTTTATGATAGGTTGGGCTT+AGG | - | chr8.3:27341250-27341269 | MS.gene89613:CDS | 35.0% |
| !!! | CTTGGTATTTTGATAGCTGT+CGG | - | chr8.3:27340537-27340556 | MS.gene89613:intron | 35.0% |
| !!! | GACAGTATTGGCAGATTTTA+TGG | - | chr8.3:27342654-27342673 | MS.gene89613:CDS | 35.0% |
| !!! | TTGATGATGCTTTTAGCCAT+TGG | - | chr8.3:27341858-27341877 | MS.gene89613:CDS | 35.0% |
| AAAACTTGGATTGAGGTCTC+TGG | - | chr8.3:27341644-27341663 | MS.gene89613:intron | 40.0% | |
| AAAAGAGCTGGACAATGATG+AGG | + | chr8.3:27340632-27340651 | None:intergenic | 40.0% | |
| AAAATTACTGACGTTGGGTG+AGG | + | chr8.3:27340057-27340076 | None:intergenic | 40.0% | |
| AAATCTGTTGGGGAAATGGA+AGG | - | chr8.3:27341357-27341376 | MS.gene89613:CDS | 40.0% | |
| AAGGAATCTGAATATGGAGG+TGG | - | chr8.3:27341376-27341395 | MS.gene89613:CDS | 40.0% | |
| AGCAAGGAGATTTGTCACAT+TGG | + | chr8.3:27341043-27341062 | None:intergenic | 40.0% | |
| CAATCTCTACTTTATCTCCC+AGG | - | chr8.3:27341218-27341237 | MS.gene89613:CDS | 40.0% | |
| CAGTTGCCTATGTTCTTTCA+GGG | - | chr8.3:27340565-27340584 | MS.gene89613:intron | 40.0% | |
| CATAGCGACTAATATCTGGT+AGG | - | chr8.3:27340728-27340747 | MS.gene89613:intron | 40.0% | |
| CCAGCTAAAATTACTGACGT+TGG | + | chr8.3:27340063-27340082 | None:intergenic | 40.0% | |
| CTGGGAGATAAAGTAGAGAT+TGG | + | chr8.3:27341220-27341239 | None:intergenic | 40.0% | |
| CTTTCTGCAAGTTCGATTCA+CGG | + | chr8.3:27342576-27342595 | None:intergenic | 40.0% | |
| GAACAAAGCATGGAAAGGAT+TGG | + | chr8.3:27341585-27341604 | None:intergenic | 40.0% | |
| GCAAGGAGATTTGTCACATT+GGG | + | chr8.3:27341042-27341061 | None:intergenic | 40.0% | |
| GGATGTTGCAAAGCAATTGA+AGG | - | chr8.3:27341679-27341698 | MS.gene89613:intron | 40.0% | |
| GTAGTCAGCTTCCTCTATAT+GGG | - | chr8.3:27339797-27339816 | MS.gene89613:CDS | 40.0% | |
| TAAAAGGTAATATGCCCTGG+TGG | + | chr8.3:27340828-27340847 | None:intergenic | 40.0% | |
| TAACACGCATCCAATAGAAC+GGG | + | chr8.3:27339846-27339865 | None:intergenic | 40.0% | |
| TAATACCCGCAAAAAAGAGC+TGG | + | chr8.3:27340644-27340663 | None:intergenic | 40.0% | |
| TAGTATGCAATACCACCAAC+AGG | + | chr8.3:27341412-27341431 | None:intergenic | 40.0% | |
| TCGTAAATCTGTTGGGGAAA+TGG | - | chr8.3:27341353-27341372 | MS.gene89613:CDS | 40.0% | |
| TGGAAGGAATCTGAATATGG+AGG | - | chr8.3:27341373-27341392 | MS.gene89613:CDS | 40.0% | |
| TGTAGTCAGCTTCCTCTATA+TGG | - | chr8.3:27339796-27339815 | MS.gene89613:CDS | 40.0% | |
| TTACAGTCTGTCATTGTTGC+TGG | - | chr8.3:27342087-27342106 | MS.gene89613:intron | 40.0% | |
| TTATGGGAGCAATAGGTTCA+GGG | - | chr8.3:27342671-27342690 | MS.gene89613:CDS | 40.0% | |
| TTTATGGGAGCAATAGGTTC+AGG | - | chr8.3:27342670-27342689 | MS.gene89613:CDS | 40.0% | |
| ! | AAAGGATATGGTCTTGGTTC+GGG | - | chr8.3:27340693-27340712 | MS.gene89613:intron | 40.0% |
| ! | ATCACTCCTATTGTCACTTC+TGG | - | chr8.3:27339904-27339923 | MS.gene89613:intron | 40.0% |
| ! | GAGGTTTTCACTATTTAGGG+TGG | - | chr8.3:27340445-27340464 | MS.gene89613:intron | 40.0% |
| ! | GCAGATTTTATGGGAGCAAT+AGG | - | chr8.3:27342664-27342683 | MS.gene89613:CDS | 40.0% |
| ! | TATTGGTGCTCTGACAGTAT+TGG | - | chr8.3:27342642-27342661 | MS.gene89613:CDS | 40.0% |
| ! | TCACTCCTATTGTCACTTCT+GGG | - | chr8.3:27339905-27339924 | MS.gene89613:intron | 40.0% |
| ! | TTTGGAACATGTCTCTTACC+TGG | + | chr8.3:27341449-27341468 | None:intergenic | 40.0% |
| !! | AAGAATAATGGGCATGTTGG+AGG | + | chr8.3:27341181-27341200 | None:intergenic | 40.0% |
| !! | CCAACGTCAGTAATTTTAGC+TGG | - | chr8.3:27340060-27340079 | MS.gene89613:intron | 40.0% |
| !! | CTGAAGAATAATGGGCATGT+TGG | + | chr8.3:27341184-27341203 | None:intergenic | 40.0% |
| !! | GAAAGTGCCATTTAGAGAGA+AGG | - | chr8.3:27339735-27339754 | MS.gene89613:CDS | 40.0% |
| !! | TAGGTTGGGCTTAGGATTTT+TGG | - | chr8.3:27341258-27341277 | MS.gene89613:CDS | 40.0% |
| !! | TTGAAACCGAGTTTGTTGCT+GGG | - | chr8.3:27342407-27342426 | MS.gene89613:intron | 40.0% |
| !! | TTTGAAACCGAGTTTGTTGC+TGG | - | chr8.3:27342406-27342425 | MS.gene89613:intron | 40.0% |
| !! | TTTTCACTATTTAGGGTGGC+AGG | - | chr8.3:27340449-27340468 | MS.gene89613:intron | 40.0% |
| !!! | ATTGTCCAGCTCTTTTTTGC+GGG | - | chr8.3:27340636-27340655 | MS.gene89613:intron | 40.0% |
| !!! | CATTGTCCAGCTCTTTTTTG+CGG | - | chr8.3:27340635-27340654 | MS.gene89613:intron | 40.0% |
| AACACCACAGAAAAGTGGCA+TGG | + | chr8.3:27342330-27342349 | None:intergenic | 45.0% | |
| AAGGCCAGTATACTTGTAGC+CGG | - | chr8.3:27342019-27342038 | MS.gene89613:intron | 45.0% | |
| ACAACAATGTGCGAGAGGAT+CGG | - | chr8.3:27339971-27339990 | MS.gene89613:intron | 45.0% | |
| ACCTTACAGGCAAAACCACA+CGG | + | chr8.3:27341107-27341126 | None:intergenic | 45.0% | |
| AGAGTTCCCAGCAACAAACT+CGG | + | chr8.3:27342416-27342435 | None:intergenic | 45.0% | |
| AGTTTCCACTGTACTTACGG+TGG | + | chr8.3:27341330-27341349 | None:intergenic | 45.0% | |
| ATACTTCCAAGGTTTCCGTG+TGG | - | chr8.3:27341089-27341108 | MS.gene89613:CDS | 45.0% | |
| CGAGCATTCTTTGACCTTAC+AGG | + | chr8.3:27341120-27341139 | None:intergenic | 45.0% | |
| CGTCAACAGGGAAATTCCAA+TGG | + | chr8.3:27341877-27341896 | None:intergenic | 45.0% | |
| CTCCGTTTCTGCCATAGAAA+AGG | + | chr8.3:27340506-27340525 | None:intergenic | 45.0% | |
| GAACATGTCTCTTACCTGGA+AGG | + | chr8.3:27341445-27341464 | None:intergenic | 45.0% | |
| GCAGTTGCCTATGTTCTTTC+AGG | - | chr8.3:27340564-27340583 | MS.gene89613:intron | 45.0% | |
| GGAAGATCAAGACAGTAGCA+AGG | + | chr8.3:27341059-27341078 | None:intergenic | 45.0% | |
| GTAAGGTCAAAGAATGCTCG+TGG | - | chr8.3:27341120-27341139 | MS.gene89613:intron | 45.0% | |
| GTCGAGTGTATCCCATATAG+AGG | + | chr8.3:27339811-27339830 | None:intergenic | 45.0% | |
| GTTATCCTTGCTTCAAACCG+TGG | - | chr8.3:27339862-27339881 | MS.gene89613:CDS | 45.0% | |
| TAGCATTTCCGACTCCAAGT+TGG | + | chr8.3:27340608-27340627 | None:intergenic | 45.0% | |
| TATGGGATACACTCGACAAC+AGG | - | chr8.3:27339814-27339833 | MS.gene89613:CDS | 45.0% | |
| TCACATTGGGAAGATTCTGC+CGG | + | chr8.3:27341029-27341048 | None:intergenic | 45.0% | |
| TTCAAACCGTGGAACTGTCA+TGG | - | chr8.3:27339873-27339892 | MS.gene89613:CDS | 45.0% | |
| ! | GAACAACAAATGGTGATGCC+TGG | - | chr8.3:27342547-27342566 | MS.gene89613:CDS | 45.0% |
| ! | TCAGGGATGTATGGTAGTGT+GGG | - | chr8.3:27340582-27340601 | MS.gene89613:intron | 45.0% |
| ! | TTCAGGGATGTATGGTAGTG+TGG | - | chr8.3:27340581-27340600 | MS.gene89613:intron | 45.0% |
| !! | CTCTTCGTGAGGCATTTTAC+CGG | - | chr8.3:27341007-27341026 | MS.gene89613:CDS | 45.0% |
| !! | GCATTCGGAGGCATTTGTAT+TGG | - | chr8.3:27342625-27342644 | MS.gene89613:CDS | 45.0% |
| AAAGAATGCTCGTGGACAGC+AGG | - | chr8.3:27341128-27341147 | MS.gene89613:intron | 50.0% | |
| AACGGAGCACAGAAGCTACT+TGG | - | chr8.3:27340519-27340538 | MS.gene89613:intron | 50.0% | |
| AACTAGACATGCACCTCCAG+CGG | + | chr8.3:27342069-27342088 | None:intergenic | 50.0% | |
| AAGAATGCTCGTGGACAGCA+GGG | - | chr8.3:27341129-27341148 | MS.gene89613:intron | 50.0% | |
| AAGGAAAGAGCCAGTGAGCT+TGG | - | chr8.3:27342748-27342767 | MS.gene89613:CDS | 50.0% | |
| AAGTTCGATTCACGGTGTCC+AGG | + | chr8.3:27342568-27342587 | None:intergenic | 50.0% | |
| ACCAAAGAAGCCAAGCTCAC+TGG | + | chr8.3:27342761-27342780 | None:intergenic | 50.0% | |
| ACCACAGAAAAGTGGCATGG+AGG | + | chr8.3:27342327-27342346 | None:intergenic | 50.0% | |
| ACCACCATTAACAGTGGACG+TGG | - | chr8.3:27340916-27340935 | MS.gene89613:intron | 50.0% | |
| ACGAGCCCAGAAGTGACAAT+AGG | + | chr8.3:27339913-27339932 | None:intergenic | 50.0% | |
| ACGTCCACTGTTAATGGTGG+TGG | + | chr8.3:27340917-27340936 | None:intergenic | 50.0% | |
| ACTATATCACTGCGCCTTCC+AGG | - | chr8.3:27341428-27341447 | MS.gene89613:CDS | 50.0% | |
| AGCTCCACGTCCACTGTTAA+TGG | + | chr8.3:27340923-27340942 | None:intergenic | 50.0% | |
| AGGCCAGTATACTTGTAGCC+GGG | - | chr8.3:27342020-27342039 | MS.gene89613:intron | 50.0% | |
| AGGTTCACCTGGTGATAAGC+AGG | - | chr8.3:27341831-27341850 | MS.gene89613:CDS | 50.0% | |
| AGTCCCACCACCATTAACAG+TGG | - | chr8.3:27340910-27340929 | MS.gene89613:intron | 50.0% | |
| AGTGGACAACAATGTGCGAG+AGG | - | chr8.3:27339966-27339985 | MS.gene89613:intron | 50.0% | |
| CAACAATGTGCGAGAGGATC+GGG | - | chr8.3:27339972-27339991 | MS.gene89613:intron | 50.0% | |
| CAAGCTCCATGACAGTTCCA+CGG | + | chr8.3:27339882-27339901 | None:intergenic | 50.0% | |
| CAATGACCCTGCTTATCACC+AGG | + | chr8.3:27341841-27341860 | None:intergenic | 50.0% | |
| CCTGTCAGCAGTCTGAACTT+CGG | + | chr8.3:27339716-27339735 | None:intergenic | 50.0% | |
| CGTCCACTGTTAATGGTGGT+GGG | + | chr8.3:27340916-27340935 | None:intergenic | 50.0% | |
| CTGTCAGCAGTCTGAACTTC+GGG | + | chr8.3:27339715-27339734 | None:intergenic | 50.0% | |
| CTTCTCCACCGTAAGTACAG+TGG | - | chr8.3:27341322-27341341 | MS.gene89613:CDS | 50.0% | |
| GAGCAATAGGTTCAGGGACA+GGG | - | chr8.3:27342677-27342696 | MS.gene89613:CDS | 50.0% | |
| GCAAAACCACACGGAAACCT+TGG | + | chr8.3:27341098-27341117 | None:intergenic | 50.0% | |
| GGTCACTCAATTCCTGTTGG+TGG | - | chr8.3:27341397-27341416 | MS.gene89613:CDS | 50.0% | |
| GGTGGTCACTCAATTCCTGT+TGG | - | chr8.3:27341394-27341413 | MS.gene89613:CDS | 50.0% | |
| GGTTCACCTGGTGATAAGCA+GGG | - | chr8.3:27341832-27341851 | MS.gene89613:CDS | 50.0% | |
| TCCACGTCCACTGTTAATGG+TGG | + | chr8.3:27340920-27340939 | None:intergenic | 50.0% | |
| TCGGGAAGGAACGAGAGAAA+CGG | + | chr8.3:27339697-27339716 | None:intergenic | 50.0% | |
| TCTCACACTTCTGCTAGCAG+TGG | - | chr8.3:27340332-27340351 | MS.gene89613:intron | 50.0% | |
| ! | AGGGACAGGGATTTTGCTTG+CGG | - | chr8.3:27342690-27342709 | MS.gene89613:CDS | 50.0% |
| ! | AGGTCTCTGGTTCATCTGCT+AGG | - | chr8.3:27341657-27341676 | MS.gene89613:intron | 50.0% |
| ! | CAGTTCCACGGTTTGAAGCA+AGG | + | chr8.3:27339870-27339889 | None:intergenic | 50.0% |
| ! | GGTCTCTGGTTCATCTGCTA+GGG | - | chr8.3:27341658-27341677 | MS.gene89613:intron | 50.0% |
| ! | TATGGTAGTGTGGGCCAACT+TGG | - | chr8.3:27340591-27340610 | MS.gene89613:intron | 50.0% |
| !! | TCCGTGTGGTTTTGCCTGTA+AGG | - | chr8.3:27341103-27341122 | MS.gene89613:CDS | 50.0% |
| !!! | TCCTCCATGCCACTTTTCTG+TGG | - | chr8.3:27342323-27342342 | MS.gene89613:intron | 50.0% |
| ACTAGACATGCACCTCCAGC+GGG | + | chr8.3:27342068-27342087 | None:intergenic | 55.0% | |
| AGTGTGGGCCAACTTGGAGT+CGG | - | chr8.3:27340597-27340616 | MS.gene89613:intron | 55.0% | |
| ATCCCCACTGCTGCAGCATT+CGG | - | chr8.3:27342610-27342629 | MS.gene89613:CDS | 55.0% | |
| CAAGGTTCGTGCTCTTCGTG+AGG | - | chr8.3:27340996-27341015 | MS.gene89613:CDS | 55.0% | |
| CAGCAGTCTGAACTTCGGGA+AGG | + | chr8.3:27339711-27339730 | None:intergenic | 55.0% | |
| CAGGTGCAGACCCGTTCTAT+TGG | - | chr8.3:27339833-27339852 | MS.gene89613:CDS | 55.0% | |
| CCGAAGTTCAGACTGCTGAC+AGG | - | chr8.3:27339713-27339732 | MS.gene89613:CDS | 55.0% | |
| CGTGGAACTGTCATGGAGCT+TGG | - | chr8.3:27339880-27339899 | MS.gene89613:intron | 55.0% | |
| CTGCAGCAGTGGGGATGTAT+CGG | + | chr8.3:27342606-27342625 | None:intergenic | 55.0% | |
| GCCAGTGAGCTTGGCTTCTT+TGG | - | chr8.3:27342757-27342776 | MS.gene89613:CDS | 55.0% | |
| GGACGTGGAGCTGAGTTTGA+AGG | - | chr8.3:27340931-27340950 | MS.gene89613:intron | 55.0% | |
| GGAGCAATAGGTTCAGGGAC+AGG | - | chr8.3:27342676-27342695 | MS.gene89613:CDS | 55.0% | |
| TGGCCCGGCTACAAGTATAC+TGG | + | chr8.3:27342026-27342045 | None:intergenic | 55.0% | |
| ! | CTCGTCATGCAGCTTTTGGC+TGG | - | chr8.3:27339928-27339947 | MS.gene89613:intron | 55.0% |
| ! | TGGGCTCGTCATGCAGCTTT+TGG | - | chr8.3:27339924-27339943 | MS.gene89613:intron | 55.0% |
| CCTCCGAATGCTGCAGCAGT+GGG | + | chr8.3:27342616-27342635 | None:intergenic | 60.0% | |
| CTCCGAATGCTGCAGCAGTG+GGG | + | chr8.3:27342615-27342634 | None:intergenic | 60.0% | |
| GCCAGTCAATAGCCCAGCAC+TGG | + | chr8.3:27342046-27342065 | None:intergenic | 60.0% | |
| ! | GCCAGTGCTGGGCTATTGAC+TGG | - | chr8.3:27342042-27342061 | MS.gene89613:intron | 60.0% |
| !! | TCAATAGCCCAGCACTGGCC+CGG | + | chr8.3:27342041-27342060 | None:intergenic | 60.0% |
| ACTTGTAGCCGGGCCAGTGC+TGG | - | chr8.3:27342030-27342049 | MS.gene89613:intron | 65.0% | |
| CCCACTGCTGCAGCATTCGG+AGG | - | chr8.3:27342613-27342632 | MS.gene89613:CDS | 65.0% | |
| CTTGTAGCCGGGCCAGTGCT+GGG | - | chr8.3:27342031-27342050 | MS.gene89613:intron | 65.0% | |
| GCCTCCGAATGCTGCAGCAG+TGG | + | chr8.3:27342617-27342636 | None:intergenic | 65.0% | |
| ! | GCTATTGACTGGCCCGCTGG+AGG | - | chr8.3:27342053-27342072 | MS.gene89613:intron | 65.0% |
| ! | TGGGCTATTGACTGGCCCGC+TGG | - | chr8.3:27342050-27342069 | MS.gene89613:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 27339658 | 27342786 | 27339658 | ID=MS.gene89613 |
| chr8.3 | mRNA | 27339658 | 27342786 | 27339658 | ID=MS.gene89613.t1;Parent=MS.gene89613 |
| chr8.3 | exon | 27342443 | 27342786 | 27342443 | ID=MS.gene89613.t1.exon1;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27342443 | 27342786 | 27342443 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| chr8.3 | exon | 27341699 | 27341926 | 27341699 | ID=MS.gene89613.t1.exon2;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27341699 | 27341926 | 27341699 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| chr8.3 | exon | 27341205 | 27341559 | 27341205 | ID=MS.gene89613.t1.exon3;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27341205 | 27341559 | 27341205 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| chr8.3 | exon | 27340995 | 27341122 | 27340995 | ID=MS.gene89613.t1.exon4;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27340995 | 27341122 | 27340995 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| chr8.3 | exon | 27340744 | 27340879 | 27340744 | ID=MS.gene89613.t1.exon5;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27340744 | 27340879 | 27340744 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| chr8.3 | exon | 27339658 | 27339897 | 27339658 | ID=MS.gene89613.t1.exon6;Parent=MS.gene89613.t1 |
| chr8.3 | CDS | 27339658 | 27339897 | 27339658 | ID=cds.MS.gene89613.t1;Parent=MS.gene89613.t1 |
| Gene Sequence |
| Protein sequence |
