Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37094.t1 | XP_003628446.1 | 100 | 476 | 0 | 0 | 9 | 484 | 1 | 476 | 1.30E-264 | 921.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37094.t1 | Q54XK2 | 72.5 | 472 | 129 | 1 | 12 | 483 | 2 | 472 | 6.0e-197 | 688.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37094.t1 | G7LBX9 | 100.0 | 476 | 0 | 0 | 9 | 484 | 1 | 476 | 9.7e-265 | 921.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059303 | MS.gene37094 | -0.809522 | 1.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032325 | MS.gene37094 | PPI |
| MS.gene37094 | MS.gene32242 | PPI |
| MS.gene007852 | MS.gene37094 | PPI |
| MS.gene007853 | MS.gene37094 | PPI |
| MS.gene38994 | MS.gene37094 | PPI |
| MS.gene37094 | MS.gene89613 | PPI |
| MS.gene02479 | MS.gene37094 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37094.t1 | MTR_8g058330 | 100.000 | 476 | 0 | 0 | 9 | 484 | 1 | 476 | 0.0 | 966 |
| MS.gene37094.t1 | MTR_8g076770 | 99.580 | 476 | 2 | 0 | 9 | 484 | 1 | 476 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37094.t1 | AT2G34250 | 93.697 | 476 | 29 | 1 | 9 | 484 | 1 | 475 | 0.0 | 911 |
| MS.gene37094.t1 | AT2G34250 | 93.697 | 476 | 29 | 1 | 9 | 484 | 1 | 475 | 0.0 | 911 |
| MS.gene37094.t1 | AT2G34250 | 93.697 | 476 | 29 | 1 | 9 | 484 | 1 | 475 | 0.0 | 911 |
| MS.gene37094.t1 | AT1G29310 | 93.487 | 476 | 30 | 1 | 9 | 484 | 1 | 475 | 0.0 | 910 |
| MS.gene37094.t1 | AT1G29310 | 93.487 | 476 | 30 | 1 | 9 | 484 | 1 | 475 | 0.0 | 910 |
| MS.gene37094.t1 | AT1G78720 | 90.947 | 475 | 42 | 1 | 9 | 483 | 1 | 474 | 0.0 | 889 |
| MS.gene37094.t1 | AT1G78720 | 90.947 | 475 | 42 | 1 | 9 | 483 | 1 | 474 | 0.0 | 889 |
| MS.gene37094.t1 | AT1G78720 | 90.526 | 475 | 42 | 2 | 9 | 483 | 1 | 472 | 0.0 | 879 |
Find 0 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATGATATTTATTGTTT+TGG | + | 56512:9250-9269 | MS.gene37094:intron | 10.0% |
| !! | AAGTATAAATAAAACAATTG+GGG | - | 56512:9625-9644 | MS.gene37094:intergenic | 15.0% |
| !! | ACAAGTATAAATAAAACAAT+TGG | - | 56512:9627-9646 | MS.gene37094:intergenic | 15.0% |
| !! | CAAGTATAAATAAAACAATT+GGG | - | 56512:9626-9645 | MS.gene37094:intergenic | 15.0% |
| !! | CTGGTAATTATTATTATTTA+TGG | + | 56512:8474-8493 | MS.gene37094:intron | 15.0% |
| !! | GTATAATCATATTGTTAAAA+CGG | - | 56512:8992-9011 | MS.gene37094:intergenic | 15.0% |
| !! | TAATAATAATTACCAGATAT+TGG | - | 56512:8470-8489 | MS.gene37094:intergenic | 15.0% |
| !!! | TTTTAACAATATGATTATAC+TGG | + | 56512:8992-9011 | MS.gene37094:intron | 15.0% |
| !! | CATATGTAAACTTCATAAAT+AGG | - | 56512:9586-9605 | MS.gene37094:intergenic | 20.0% |
| !! | TCTAATATACAAAAGTAGAT+TGG | + | 56512:8196-8215 | MS.gene37094:intron | 20.0% |
| !!! | GTATGAAATTTTTATCATGA+TGG | + | 56512:9699-9718 | MS.gene37094:intron | 20.0% |
| !!! | TATACTTTTATCTAGTACTA+AGG | + | 56512:9487-9506 | MS.gene37094:intron | 20.0% |
| ! | AAAATTCTCTATTACCTAGA+GGG | - | 56512:9148-9167 | MS.gene37094:intergenic | 25.0% |
| ! | ACAAACAAGAAAAATGAAGA+GGG | - | 56512:7926-7945 | MS.gene37094:intergenic | 25.0% |
| ! | AGATCAAACAAAACTCAATT+AGG | - | 56512:8179-8198 | MS.gene37094:intergenic | 25.0% |
| ! | ATAATAAAACTCTACTACCT+GGG | - | 56512:8935-8954 | MS.gene37094:intergenic | 25.0% |
| ! | CCTAAAAAATAATCAGCAAA+TGG | - | 56512:9652-9671 | MS.gene37094:intergenic | 25.0% |
| ! | GGCAAAGAATATAATCTAAT+AGG | - | 56512:9203-9222 | MS.gene37094:intergenic | 25.0% |
| ! | TAAACATATGACAATGATAC+CGG | - | 56512:8389-8408 | MS.gene37094:intergenic | 25.0% |
| ! | TAATAATTACCAGATATTGG+TGG | - | 56512:8467-8486 | MS.gene37094:intergenic | 25.0% |
| ! | TACAAACAAGAAAAATGAAG+AGG | - | 56512:7927-7946 | MS.gene37094:intergenic | 25.0% |
| ! | TATATAACCTTCTCTCTAAA+CGG | - | 56512:7892-7911 | MS.gene37094:intergenic | 25.0% |
| ! | TTTAAGGAAGAATTCTCATT+TGG | + | 56512:8553-8572 | MS.gene37094:intron | 25.0% |
| !! | TAGAGAATTTTCTATTCAGT+TGG | + | 56512:9157-9176 | MS.gene37094:intron | 25.0% |
| !! | TATTATGGTATGTTGCTTAT+TGG | + | 56512:8949-8968 | MS.gene37094:intron | 25.0% |
| !! | TTGAAGCTTTATATCAAACT+AGG | - | 56512:9224-9243 | MS.gene37094:intergenic | 25.0% |
| !!! | CACTTCTTTAAAACTGAAAT+TGG | + | 56512:9773-9792 | MS.gene37094:intron | 25.0% |
| !!! | CCATTTGCTGATTATTTTTT+AGG | + | 56512:9649-9668 | MS.gene37094:intron | 25.0% |
| AAACTTCATTGTGAATCTGT+TGG | + | 56512:9048-9067 | MS.gene37094:CDS | 30.0% | |
| AAATGGAAGGAATCTGAATA+TGG | + | 56512:9073-9092 | MS.gene37094:CDS | 30.0% | |
| AACTTCATTGTGAATCTGTT+GGG | + | 56512:9049-9068 | MS.gene37094:CDS | 30.0% | |
| ATTACTGTATTCTGGTAAGA+TGG | + | 56512:7786-7805 | MS.gene37094:CDS | 30.0% | |
| CATAATAAAACTCTACTACC+TGG | - | 56512:8936-8955 | MS.gene37094:intergenic | 30.0% | |
| CTAATTGTGATATACTTCCA+AGG | + | 56512:8775-8794 | MS.gene37094:CDS | 30.0% | |
| CTGTTCTAGTAATCAACAAA+TGG | - | 56512:8672-8691 | MS.gene37094:intergenic | 30.0% | |
| GAAAATTCTCTATTACCTAG+AGG | - | 56512:9149-9168 | MS.gene37094:intergenic | 30.0% | |
| GATGCAGTGAAAACATTATA+TGG | + | 56512:8575-8594 | MS.gene37094:intron | 30.0% | |
| TGTTACTGCAAGTAATATTC+CGG | - | 56512:10031-10050 | MS.gene37094:intergenic | 30.0% | |
| TTACTGTATTCTGGTAAGAT+GGG | + | 56512:7787-7806 | MS.gene37094:CDS | 30.0% | |
| ! | CTTGGAAGTATATCACAATT+AGG | - | 56512:8777-8796 | MS.gene37094:intergenic | 30.0% |
| !! | AATCCAAGTTTTTGAGAACA+AGG | - | 56512:9380-9399 | MS.gene37094:intergenic | 30.0% |
| !! | ACAATCATTTTTCAACTTGC+AGG | + | 56512:9858-9877 | MS.gene37094:intron | 30.0% |
| !! | TTTTGTTTAGTAGTTGCAAC+AGG | - | 56512:8505-8524 | MS.gene37094:intergenic | 30.0% |
| !!! | CAGGTAGTAGAGTTTTATTA+TGG | + | 56512:8934-8953 | MS.gene37094:intron | 30.0% |
| AAAAATGAAGAGGGAGATCA+CGG | - | 56512:7917-7936 | MS.gene37093:intergenic | 35.0% | |
| AAAACCAATCAGTTCACTCA+TGG | - | 56512:9814-9833 | MS.gene37093:intergenic | 35.0% | |
| AAAACTTGGATTGAAGTCTC+TGG | + | 56512:9388-9407 | MS.gene37094:CDS | 35.0% | |
| AAGAGCAGACTGAAGAATAA+TGG | - | 56512:8890-8909 | MS.gene37094:intergenic | 35.0% | |
| AGAGCAGACTGAAGAATAAT+GGG | - | 56512:8889-8908 | MS.gene37094:intergenic | 35.0% | |
| ATAACACGCATCCAATAGAA+TGG | - | 56512:7994-8013 | MS.gene37094:intergenic | 35.0% | |
| ATGCTGACAACATAAACACA+AGG | - | 56512:9354-9373 | MS.gene37094:intergenic | 35.0% | |
| CTTCAAAAAGGCTATGGTTT+GGG | + | 56512:8418-8437 | MS.gene37094:CDS | 35.0% | |
| GAGGTGTAAAACAGTTTGAT+TGG | - | 56512:8859-8878 | MS.gene37094:intergenic | 35.0% | |
| GTTGATTACTAGAACAGACA+AGG | + | 56512:8675-8694 | MS.gene37094:CDS | 35.0% | |
| TATGGAATACACTCAACAAC+AGG | + | 56512:7961-7980 | MS.gene37094:CDS | 35.0% | |
| TATTCATTGCCACCAATATC+TGG | + | 56512:8455-8474 | MS.gene37094:CDS | 35.0% | |
| TCAGGAAGGAATGATAGAAA+TGG | - | 56512:7844-7863 | MS.gene37094:intergenic | 35.0% | |
| TTAGATGAGCTCCTTCAAAA+AGG | + | 56512:8406-8425 | MS.gene37094:CDS | 35.0% | |
| TTAGTTATGAACATGTGCTG+AGG | - | 56512:9532-9551 | MS.gene37094:intergenic | 35.0% | |
| ! | AGAAGTGAATAGCCTTAAGA+CGG | - | 56512:9760-9779 | MS.gene37094:intergenic | 35.0% |
| ! | GTTTTACAGCTTAGCTGATA+TGG | + | 56512:9300-9319 | MS.gene37094:intron | 35.0% |
| ! | TATGTTCTGTCTGGAATGTA+CGG | + | 56512:8304-8323 | MS.gene37094:CDS | 35.0% |
| ! | TTAGGGTACTTCACTTAGTA+AGG | + | 56512:7818-7837 | MS.gene37094:CDS | 35.0% |
| !! | ACAGTATTGGCAGATTTCAT+GGG | + | 56512:9988-10007 | MS.gene37094:CDS | 35.0% |
| !! | GTACTTTGAGACATTTGAGA+AGG | + | 56512:10062-10081 | MS.gene37094:CDS | 35.0% |
| AAATTTGATTCCCGATGACC+AGG | - | 56512:9901-9920 | MS.gene37094:intergenic | 40.0% | |
| AAGGAATCTGAATATGGAGG+TGG | + | 56512:9079-9098 | MS.gene37094:CDS | 40.0% | |
| AAGTCCATGAGTGAACTGAT+TGG | + | 56512:9807-9826 | MS.gene37094:intron | 40.0% | |
| AATCTGTACCTTCAACTGCT+TGG | - | 56512:9434-9453 | MS.gene37094:intergenic | 40.0% | |
| ACAAGACCAGAAGTGACAAT+GGG | - | 56512:8060-8079 | MS.gene37094:intergenic | 40.0% | |
| ACACAAGGTAGAACAATGCA+TGG | - | 56512:9339-9358 | MS.gene37094:intergenic | 40.0% | |
| ACTATATAACTGCACCCTCT+AGG | + | 56512:9131-9150 | MS.gene37094:CDS | 40.0% | |
| ACTTCATAAATAGGTCACGC+TGG | - | 56512:9577-9596 | MS.gene37094:intergenic | 40.0% | |
| AGCTAGCAGATTTGTGACAT+TGG | - | 56512:8740-8759 | MS.gene37094:intergenic | 40.0% | |
| AGGTAGAACAATGCATGGAA+AGG | - | 56512:9334-9353 | MS.gene37094:intergenic | 40.0% | |
| CAACTTGCAGGAACAACAAA+TGG | + | 56512:9870-9889 | MS.gene37094:intron | 40.0% | |
| CAATCTCTACTTCATTTCCC+AGG | + | 56512:8915-8934 | MS.gene37094:CDS | 40.0% | |
| CCTTCAAAAAGGCTATGGTT+TGG | + | 56512:8417-8436 | MS.gene37094:CDS | 40.0% | |
| CTGCTACACAGAAAATACAG+TGG | + | 56512:9025-9044 | MS.gene37094:CDS | 40.0% | |
| CTGGGAAATGAAGTAGAGAT+TGG | - | 56512:8917-8936 | MS.gene37094:intergenic | 40.0% | |
| GAAATCTGCCAATACTGTCA+GGG | - | 56512:9986-10005 | MS.gene37094:intergenic | 40.0% | |
| GAACAATGCATGGAAAGGAT+TGG | - | 56512:9329-9348 | MS.gene37094:intergenic | 40.0% | |
| GCTAGCAGATTTGTGACATT+GGG | - | 56512:8739-8758 | MS.gene37094:intergenic | 40.0% | |
| GTACATTCCAGACAGAACAT+AGG | - | 56512:8305-8324 | MS.gene37094:intergenic | 40.0% | |
| GTTGAGTGTATTCCATACAG+AGG | - | 56512:7958-7977 | MS.gene37094:intergenic | 40.0% | |
| TACAAGACCAGAAGTGACAA+TGG | - | 56512:8061-8080 | MS.gene37094:intergenic | 40.0% | |
| TGAAATCTGCCAATACTGTC+AGG | - | 56512:9987-10006 | MS.gene37094:intergenic | 40.0% | |
| TGGAAGGAATCTGAATATGG+AGG | + | 56512:9076-9095 | MS.gene37094:CDS | 40.0% | |
| TTACTCTTTGCTCCCAGAAA+CGG | + | 56512:8232-8251 | MS.gene37094:intron | 40.0% | |
| TTCAAACCGTGGAACTGTTA+TGG | + | 56512:8020-8039 | MS.gene37094:CDS | 40.0% | |
| TTGTGAATCTGTTGGGCAAA+TGG | + | 56512:9056-9075 | MS.gene37094:CDS | 40.0% | |
| ! | AAATGGTAATGCCTGGTCAT+CGG | + | 56512:9887-9906 | MS.gene37094:CDS | 40.0% |
| ! | CCAAACCATAGCCTTTTTGA+AGG | - | 56512:8420-8439 | MS.gene37094:intergenic | 40.0% |
| ! | GAACAACAAATGGTAATGCC+TGG | + | 56512:9880-9899 | MS.gene37094:CDS | 40.0% |
| ! | GTGCCTTGTTCTCAAAAACT+TGG | + | 56512:9374-9393 | MS.gene37094:CDS | 40.0% |
| !! | AAGAATAATGGGCATGTTGG+AGG | - | 56512:8878-8897 | MS.gene37094:intergenic | 40.0% |
| !! | CTGAAGAATAATGGGCATGT+TGG | - | 56512:8881-8900 | MS.gene37094:intergenic | 40.0% |
| !! | GACAGTATTGGCAGATTTCA+TGG | + | 56512:9987-10006 | MS.gene37094:CDS | 40.0% |
| !! | TGCAGTTGATAACCGTCTTA+AGG | + | 56512:9745-9764 | MS.gene37094:intron | 40.0% |
| !!! | TGGTCTTGTAATGCAGCTTT+TGG | + | 56512:8071-8090 | MS.gene37094:CDS | 40.0% |
| AAAAGAGCTGGAGGATGATG+AGG | - | 56512:8363-8382 | MS.gene37094:intergenic | 45.0% | |
| AAGACCAGAAGTGACAATGG+GGG | - | 56512:8058-8077 | MS.gene37094:intergenic | 45.0% | |
| ACAACCATTAACAGTGGTCG+GGG | + | 56512:8613-8632 | MS.gene37094:CDS | 45.0% | |
| ACCTTACAGGCAAAACCACA+CGG | - | 56512:8804-8823 | MS.gene37094:intergenic | 45.0% | |
| AGATGTTGCCAAGCAGTTGA+AGG | + | 56512:9423-9442 | MS.gene37094:CDS | 45.0% | |
| AGTCCCACAACCATTAACAG+TGG | + | 56512:8607-8626 | MS.gene37094:CDS | 45.0% | |
| ATACTTCCAAGGTTTCCGTG+TGG | + | 56512:8786-8805 | MS.gene37094:CDS | 45.0% | |
| ATTCTGGTAAGATGGGTGGT+GGG | + | 56512:7794-7813 | MS.gene37094:CDS | 45.0% | |
| CAAGACCAGAAGTGACAATG+GGG | - | 56512:8059-8078 | MS.gene37094:intergenic | 45.0% | |
| CAAGCTCCATAACAGTTCCA+CGG | - | 56512:8029-8048 | MS.gene37094:intergenic | 45.0% | |
| CACAACCATTAACAGTGGTC+GGG | + | 56512:8612-8631 | MS.gene37094:CDS | 45.0% | |
| CAGCAGCAGTGGGAATATAT+CGG | - | 56512:9939-9958 | MS.gene37094:intergenic | 45.0% | |
| CAGGTGCAGATCCATTCTAT+TGG | + | 56512:7980-7999 | MS.gene37094:CDS | 45.0% | |
| CCACAACCATTAACAGTGGT+CGG | + | 56512:8611-8630 | MS.gene37094:CDS | 45.0% | |
| CCGGTAAAATGCTTCCCTAA+GGG | - | 56512:8707-8726 | MS.gene37094:intergenic | 45.0% | |
| CGACCACTGTTAATGGTTGT+GGG | - | 56512:8613-8632 | MS.gene37094:intergenic | 45.0% | |
| CTGTATTCTGGTAAGATGGG+TGG | + | 56512:7790-7809 | MS.gene37094:CDS | 45.0% | |
| GAATCTGTTGGGCAAATGGA+AGG | + | 56512:9060-9079 | MS.gene37094:CDS | 45.0% | |
| GAGCTCCTTCAAAAAGGCTA+TGG | + | 56512:8412-8431 | MS.gene37094:CDS | 45.0% | |
| GCAGATTTCATGGGTGCAAT+TGG | + | 56512:9997-10016 | MS.gene37094:CDS | 45.0% | |
| GTTATCCTTGCTTCAAACCG+TGG | + | 56512:8009-8028 | MS.gene37094:CDS | 45.0% | |
| TAGTATGCAATGCCACCAAC+AGG | - | 56512:9115-9134 | MS.gene37094:intergenic | 45.0% | |
| TATTCTGGTAAGATGGGTGG+TGG | + | 56512:7793-7812 | MS.gene37094:CDS | 45.0% | |
| TGACATTGGGAAGATTCTGC+CGG | - | 56512:8726-8745 | MS.gene37094:intergenic | 45.0% | |
| TGATACCGGCAAAAAAGAGC+TGG | - | 56512:8375-8394 | MS.gene37094:intergenic | 45.0% | |
| TGCAAGTAATATTCCGGTCC+CGG | - | 56512:10025-10044 | MS.gene37094:intergenic | 45.0% | |
| TGTAGTCAGCTTCCTCTGTA+TGG | + | 56512:7943-7962 | MS.gene37094:CDS | 45.0% | |
| ! | AAAGGCTATGGTTTGGGATC+TGG | + | 56512:8424-8443 | MS.gene37094:CDS | 45.0% |
| ! | AATGGTAATGCCTGGTCATC+GGG | + | 56512:9888-9907 | MS.gene37094:CDS | 45.0% |
| ! | CATCTTGATAGCTGTTGGAG+AGG | + | 56512:8273-8292 | MS.gene37094:CDS | 45.0% |
| ! | CTTGGCATCTTGATAGCTGT+TGG | + | 56512:8268-8287 | MS.gene37094:CDS | 45.0% |
| ! | CTTGTAATGCAGCTTTTGGC+TGG | + | 56512:8075-8094 | MS.gene37094:CDS | 45.0% |
| ! | GCATTTGGAGGCATGTGTAT+TGG | + | 56512:9958-9977 | MS.gene37094:CDS | 45.0% |
| ! | TCTGGAATGTACGGTAGTGT+AGG | + | 56512:8313-8332 | MS.gene37094:CDS | 45.0% |
| ! | TTCATGGGTGCAATTGGTTC+CGG | + | 56512:10003-10022 | MS.gene37094:CDS | 45.0% |
| !! | GAAAGTGCCGTTTAGAGAGA+AGG | + | 56512:7882-7901 | MS.gene37094:CDS | 45.0% |
| !! | TAAGATGGGTGGTGGGTTTA+GGG | + | 56512:7801-7820 | MS.gene37094:CDS | 45.0% |
| !!! | ATCCTCCAGCTCTTTTTTGC+CGG | + | 56512:8367-8386 | MS.gene37094:CDS | 45.0% |
| !!! | CCCTTAGGGAAGCATTTTAC+CGG | + | 56512:8704-8723 | MS.gene37094:CDS | 45.0% |
| !! | TTATATAAAAACAAAATTTA+AGG | + | 56512:8537-8556 | MS.gene37094:intron | 5.0% |
| !!! | AATTTTGTTTTTATATAAAA+AGG | - | 56512:8535-8554 | MS.gene37094:intergenic | 5.0% |
| AACGGTGCACAGAAGCTACT+TGG | + | 56512:8250-8269 | MS.gene37094:CDS | 50.0% | |
| ACCAAAGAAACCAAGCTCGC+TGG | - | 56512:10094-10113 | MS.gene37094:intergenic | 50.0% | |
| AGACAAGGTTCGTGCCCTTA+GGG | + | 56512:8690-8709 | MS.gene37094:CDS | 50.0% | |
| AGCTTCTGTGCACCGTTTCT+GGG | - | 56512:8247-8266 | MS.gene37094:intergenic | 50.0% | |
| AGTCGACAACAATGTCCGTG+AGG | + | 56512:8113-8132 | MS.gene37094:CDS | 50.0% | |
| ATATGAACCCTGCTGTCCAC+GGG | - | 56512:8836-8855 | MS.gene37094:intergenic | 50.0% | |
| ATTCCCACTGCTGCTGCATT+TGG | + | 56512:9943-9962 | MS.gene37094:CDS | 50.0% | |
| CCGACCACTGTTAATGGTTG+TGG | - | 56512:8614-8633 | MS.gene37094:intergenic | 50.0% | |
| CGGGCATTCTTTGACCTTAC+AGG | - | 56512:8817-8836 | MS.gene37094:intergenic | 50.0% | |
| CGTGGAACTGTTATGGAGCT+TGG | + | 56512:8027-8046 | MS.gene37094:CDS | 50.0% | |
| GATATGAACCCTGCTGTCCA+CGG | - | 56512:8837-8856 | MS.gene37094:intergenic | 50.0% | |
| GCAAAACCACACGGAAACCT+TGG | - | 56512:8795-8814 | MS.gene37094:intergenic | 50.0% | |
| GCCGGTAAAATGCTTCCCTA+AGG | - | 56512:8708-8727 | MS.gene37094:intergenic | 50.0% | |
| GCTGTTGCCTATGTTCTGTC+TGG | + | 56512:8295-8314 | MS.gene37094:CDS | 50.0% | |
| GGTCACTCTATTCCTGTTGG+TGG | + | 56512:9100-9119 | MS.gene37094:CDS | 50.0% | |
| GGTGGTCACTCTATTCCTGT+TGG | + | 56512:9097-9116 | MS.gene37094:CDS | 50.0% | |
| GTAAGGTCAAAGAATGCCCG+TGG | + | 56512:8817-8836 | MS.gene37094:CDS | 50.0% | |
| TACCGGCAAAAAAGAGCTGG+AGG | - | 56512:8372-8391 | MS.gene37094:intergenic | 50.0% | |
| TAGCTTCTGTGCACCGTTTC+TGG | - | 56512:8248-8267 | MS.gene37094:intergenic | 50.0% | |
| TATTGGCGCCCTGACAGTAT+TGG | + | 56512:9975-9994 | MS.gene37094:CDS | 50.0% | |
| ! | ACAAGAGAGCACGATCCTCA+CGG | - | 56512:8131-8150 | MS.gene37094:intergenic | 50.0% |
| ! | ATCACCCCCATTGTCACTTC+TGG | + | 56512:8051-8070 | MS.gene37094:CDS | 50.0% |
| ! | CAGTTCCACGGTTTGAAGCA+AGG | - | 56512:8017-8036 | MS.gene37094:intergenic | 50.0% |
| ! | TCATGGGTGCAATTGGTTCC+GGG | + | 56512:10004-10023 | MS.gene37094:CDS | 50.0% |
| !! | GTAAGATGGGTGGTGGGTTT+AGG | + | 56512:7800-7819 | MS.gene37094:CDS | 50.0% |
| !! | TCCGTGTGGTTTTGCCTGTA+AGG | + | 56512:8800-8819 | MS.gene37094:CDS | 50.0% |
| AAACGGCACTTTCCTGTCCG+CGG | - | 56512:7875-7894 | MS.gene37094:intergenic | 55.0% | |
| AAAGAATGCCCGTGGACAGC+AGG | + | 56512:8825-8844 | MS.gene37094:CDS | 55.0% | |
| AAGAATGCCCGTGGACAGCA+GGG | + | 56512:8826-8845 | MS.gene37094:CDS | 55.0% | |
| AAGGAAAGAGCCAGCGAGCT+TGG | + | 56512:10081-10100 | MS.gene37094:CDS | 55.0% | |
| AGCTCCCCGACCACTGTTAA+TGG | - | 56512:8620-8639 | MS.gene37094:intergenic | 55.0% | |
| AGTGTAGGCCAGCTTGGAGT+GGG | + | 56512:8328-8347 | MS.gene37094:CDS | 55.0% | |
| CAGACAAGGTTCGTGCCCTT+AGG | + | 56512:8689-8708 | MS.gene37094:CDS | 55.0% | |
| CCTCCAAATGCAGCAGCAGT+GGG | - | 56512:9949-9968 | MS.gene37094:intergenic | 55.0% | |
| CCTTCCTGAAGTTCAGACCG+CGG | + | 56512:7855-7874 | MS.gene37094:CDS | 55.0% | |
| GAGCTGGAGGATGATGAGGA+TGG | - | 56512:8359-8378 | MS.gene37094:intergenic | 55.0% | |
| GCCAGCGAGCTTGGTTTCTT+TGG | + | 56512:10090-10109 | MS.gene37094:CDS | 55.0% | |
| GGTCGGGGAGCTGAATTTGA+GGG | + | 56512:8628-8647 | MS.gene37094:CDS | 55.0% | |
| TACGGTAGTGTAGGCCAGCT+TGG | + | 56512:8322-8341 | MS.gene37094:CDS | 55.0% | |
| TAGTGTAGGCCAGCTTGGAG+TGG | + | 56512:8327-8346 | MS.gene37094:CDS | 55.0% | |
| TGGCATTTCCCACTCCAAGC+TGG | - | 56512:8339-8358 | MS.gene37094:intergenic | 55.0% | |
| TGGTCGGGGAGCTGAATTTG+AGG | + | 56512:8627-8646 | MS.gene37094:CDS | 55.0% | |
| CCCACTGCTGCTGCATTTGG+AGG | + | 56512:9946-9965 | MS.gene37094:CDS | 60.0% | |
| CCGCGGTCTGAACTTCAGGA+AGG | - | 56512:7858-7877 | MS.gene37094:intergenic | 60.0% | |
| CTGAAGTTCAGACCGCGGAC+AGG | + | 56512:7860-7879 | MS.gene37094:CDS | 60.0% | |
| CTGTCCGCGGTCTGAACTTC+AGG | - | 56512:7862-7881 | MS.gene37094:intergenic | 60.0% | |
| GCCTCCAAATGCAGCAGCAG+TGG | - | 56512:9950-9969 | MS.gene37094:intergenic | 60.0% | |
| ! | GGTGCAATTGGTTCCGGGAC+CGG | + | 56512:10009-10028 | MS.gene37094:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56512 | gene | 7781 | 10119 | 7781 | ID=MS.gene37094 |
| 56512 | mRNA | 7781 | 10119 | 7781 | ID=MS.gene37094.t1;Parent=MS.gene37094 |
| 56512 | exon | 7781 | 8148 | 7781 | ID=MS.gene37094.t1.exon1;Parent=MS.gene37094.t1 |
| 56512 | CDS | 7781 | 8148 | 7781 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| 56512 | exon | 8249 | 8476 | 8249 | ID=MS.gene37094.t1.exon2;Parent=MS.gene37094.t1 |
| 56512 | CDS | 8249 | 8476 | 8249 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| 56512 | exon | 8582 | 8936 | 8582 | ID=MS.gene37094.t1.exon3;Parent=MS.gene37094.t1 |
| 56512 | CDS | 8582 | 8936 | 8582 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| 56512 | exon | 9025 | 9152 | 9025 | ID=MS.gene37094.t1.exon4;Parent=MS.gene37094.t1 |
| 56512 | CDS | 9025 | 9152 | 9025 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| 56512 | exon | 9309 | 9444 | 9309 | ID=MS.gene37094.t1.exon5;Parent=MS.gene37094.t1 |
| 56512 | CDS | 9309 | 9444 | 9309 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| 56512 | exon | 9880 | 10119 | 9880 | ID=MS.gene37094.t1.exon6;Parent=MS.gene37094.t1 |
| 56512 | CDS | 9880 | 10119 | 9880 | ID=cds.MS.gene37094.t1;Parent=MS.gene37094.t1 |
| Gene Sequence |
| Protein sequence |
