AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89831


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89831.t1 MTR_7g064130 95.982 448 15 1 1 445 1 448 0.0 870
MS.gene89831.t1 MTR_2g084605 74.476 286 73 0 160 445 107 392 3.36e-162 463
MS.gene89831.t1 MTR_7g064190 96.875 64 2 0 382 445 16 79 1.69e-38 134
MS.gene89831.t1 MTR_0013s0150 30.693 303 185 9 150 445 93 377 4.41e-35 134
MS.gene89831.t1 MTR_4g077000 30.841 321 191 9 132 445 92 388 3.48e-33 129
MS.gene89831.t1 MTR_3g033620 30.584 291 181 8 161 445 112 387 1.17e-29 119
MS.gene89831.t1 MTR_7g074090 33.621 232 128 8 220 445 96 307 3.02e-27 111
MS.gene89831.t1 MTR_7g074090 33.621 232 128 8 220 445 96 307 1.25e-26 110
MS.gene89831.t1 MTR_7g074090 33.621 232 128 8 220 445 114 325 1.61e-26 110
MS.gene89831.t1 MTR_7g074070 34.061 229 131 8 220 445 107 318 5.19e-25 105
MS.gene89831.t1 MTR_3g071970 26.882 279 194 5 174 445 441 716 1.93e-24 107
MS.gene89831.t1 MTR_2g081000 30.137 219 137 5 222 438 241 445 2.34e-19 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89831.t1 AT2G37860 60.706 453 149 6 1 445 1 432 1.05e-173 494
MS.gene89831.t1 AT2G37860 60.706 453 149 6 1 445 1 432 1.05e-173 494
MS.gene89831.t1 AT5G22790 74.324 296 75 1 151 445 138 433 5.38e-168 479
MS.gene89831.t1 AT2G37860 56.522 368 131 6 1 360 1 347 4.07e-118 349
MS.gene89831.t1 AT2G37860 56.522 368 131 6 1 360 1 347 4.07e-118 349
MS.gene89831.t1 AT5G12470 29.568 301 193 7 151 445 96 383 4.15e-34 132
MS.gene89831.t1 AT3G08640 34.008 247 141 8 203 445 94 322 9.96e-32 124
MS.gene89831.t1 AT3G08630 34.061 229 133 6 220 445 106 319 6.12e-31 122
MS.gene89831.t1 AT3G56140 31.667 240 143 6 219 445 258 489 2.86e-25 108
MS.gene89831.t1 AT3G56140 31.799 239 142 6 220 445 478 708 3.54e-25 109
MS.gene89831.t1 AT3G56140 31.799 239 142 6 220 445 478 708 3.54e-25 109
MS.gene89831.t1 AT2G40400 29.371 286 178 8 174 445 424 699 1.93e-24 107
MS.gene89831.t1 AT2G40400 29.371 286 178 8 174 445 424 699 1.93e-24 107
MS.gene89831.t1 AT5G24690 30.415 217 139 3 222 438 240 444 9.88e-21 95.1
MS.gene89831.t1 AT2G40400 29.237 236 144 7 174 395 424 650 1.90e-17 85.5

Find 117 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTTCTTCTTAGATATT+TGG 0.155876 7.3:-41307100 MS.gene89831:CDS
GCGGGTTGTTCATCGAATTT+TGG 0.160333 7.3:-41307675 MS.gene89831:CDS
GGGAAAGGAACAGAAAATTT+TGG 0.206843 7.3:-41307379 MS.gene89831:CDS
TTTGAAGAGTGCTGCTCTTT+GGG 0.218226 7.3:-41303930 MS.gene89831:CDS
TGGAAAACCATCAATATCTA+AGG 0.254488 7.3:-41306534 MS.gene89831:CDS
AAAAGAGAGGCAAAGACTTT+TGG 0.264746 7.3:-41306646 MS.gene89831:CDS
GGATTTGGATGTGGTATTAT+AGG 0.277977 7.3:-41306069 MS.gene89831:CDS
GTCGGGAAAGAAGCTGGTTT+GGG 0.334014 7.3:-41307633 MS.gene89831:CDS
TCTTCTTAGATATTTGGATT+TGG 0.336682 7.3:-41307094 MS.gene89831:CDS
TCCATGCAGGTGTGTTCCTT+GGG 0.357793 7.3:-41302997 MS.gene89831:intron
ATCCATGCAGGTGTGTTCCT+TGG 0.370707 7.3:-41302998 MS.gene89831:intron
TTGGCACCTTATGCTCGAAT+TGG 0.371610 7.3:-41306554 MS.gene89831:CDS
ATGTATGCAGGTGTTGGATT+TGG 0.374444 7.3:-41306084 MS.gene89831:CDS
AGGAATCCCTTAGATATTGA+TGG 0.391446 7.3:+41306527 None:intergenic
CACTTGTTCACACAAATTGC+TGG 0.394745 7.3:+41307534 None:intergenic
TGTAAGTACGATAGAATTAT+CGG 0.396315 7.3:-41307424 MS.gene89831:CDS
TATGTTGCAGATCTTCTTGT+TGG 0.403747 7.3:-41306608 MS.gene89831:CDS
ATCTAAGAAGAAGCAACTTC+GGG 0.404666 7.3:+41307106 None:intergenic
ATCATCATTTCCAACACTCT+TGG 0.405442 7.3:+41307341 None:intergenic
TGTCGGGAAAGAAGCTGGTT+TGG 0.407345 7.3:-41307634 MS.gene89831:CDS
GATAATGGTGTTGTGTTTGA+TGG 0.408754 7.3:-41307321 MS.gene89831:CDS
AGCTTTGGAAGTGGCGGAGC+AGG 0.413212 7.3:-41307282 MS.gene89831:CDS
GGAGATGGCGGTGGTGGCGG+TGG 0.416567 7.3:-41307261 MS.gene89831:CDS
CTTATGCAGCTTTACCTAGC+AGG 0.418534 7.3:-41306487 MS.gene89831:intron
TTATCATGTTTGCAATGCCT+TGG 0.420614 7.3:+41306046 None:intergenic
GCAGGTTCCACCAGTTGCTC+TGG 0.421142 7.3:-41302903 MS.gene89831:CDS
GGAGCAGGAGATGGCGGTGG+TGG 0.435083 7.3:-41307267 MS.gene89831:CDS
GCAGGAGATGGCGGTGGTGG+CGG 0.436118 7.3:-41307264 MS.gene89831:CDS
GACGGTTGTTAATGTTGCTT+TGG 0.439449 7.3:-41306585 MS.gene89831:CDS
GTGGCATGCAGTTTGTTGAC+TGG 0.441374 7.3:-41302841 MS.gene89831:CDS
ACTGTGAAAGCCAGAGCAAC+TGG 0.449407 7.3:+41302893 None:intergenic
TGTTGCTTTGGTTGGAATGT+TGG 0.454554 7.3:-41306573 MS.gene89831:CDS
TCTTAGATATTTGGATTTGG+AGG 0.455983 7.3:-41307091 MS.gene89831:intron
GTTGTTAATGTTGCTTTGGT+TGG 0.456847 7.3:-41306581 MS.gene89831:CDS
AGTGGTGGTAATGGAAGCTT+TGG 0.457520 7.3:-41307297 MS.gene89831:CDS
AGCATCGCCAATGGCAAAGC+AGG 0.473131 7.3:-41302921 MS.gene89831:CDS
GTTGCTCTGGCTTTCACAGT+TGG 0.475783 7.3:-41302890 MS.gene89831:CDS
GCAGGTGTTGGATTTGGATG+TGG 0.479236 7.3:-41306078 MS.gene89831:CDS
TATCTAAGAAGAAGCAACTT+CGG 0.479521 7.3:+41307105 None:intergenic
TCAATATCTAAGGGATTCCT+TGG 0.479546 7.3:-41306524 MS.gene89831:CDS
TGCAGTTTGTTGACTGGGCT+AGG 0.482177 7.3:-41302835 MS.gene89831:CDS
CATCAATGGACTGGAACGTT+TGG 0.482709 7.3:-41302948 MS.gene89831:CDS
AAGTGATAGTGTTGTGGGAA+AGG 0.483899 7.3:-41307394 MS.gene89831:CDS
GGTGGAACCTGCTTTGCCAT+TGG 0.486100 7.3:+41302914 None:intergenic
GGTGTTGTGTTTGATGGTAG+TGG 0.488998 7.3:-41307315 MS.gene89831:CDS
ACTTGGAACATACTTCTTCA+AGG 0.489407 7.3:-41306200 MS.gene89831:intron
CTCTTCAAAAGAGGTGGTAC+AGG 0.498159 7.3:+41303944 None:intergenic
GCAGCCTCCAACATATCAAA+AGG 0.499434 7.3:+41307144 None:intergenic
TATGCTTCGCAATCGAATGC+TGG 0.506531 7.3:-41306916 MS.gene89831:CDS
ACGCGATACCAGGTCATCAA+TGG 0.507241 7.3:-41302962 MS.gene89831:CDS
GTAAGTGTCGGGAAAGAAGC+TGG 0.512196 7.3:-41307639 MS.gene89831:CDS
GGTATAATGTATGCAGGTGT+TGG 0.513052 7.3:-41306090 MS.gene89831:CDS
TTGAAGAGTGCTGCTCTTTG+GGG 0.513979 7.3:-41303929 MS.gene89831:intron
TACGATAGAATTATCGGAAG+GGG 0.518047 7.3:-41307418 MS.gene89831:CDS
TGGCATGCAGTTTGTTGACT+GGG 0.519280 7.3:-41302840 MS.gene89831:CDS
GGAAGTGGCGGAGCAGGAGA+TGG 0.519395 7.3:-41307276 MS.gene89831:CDS
ATGTTGCAGATCTTCTTGTT+GGG 0.519882 7.3:-41306607 MS.gene89831:CDS
TTTGATGGTAGTGGTGGTAA+TGG 0.523492 7.3:-41307306 MS.gene89831:CDS
TGGCTCGAGTTGTAAGTGTC+GGG 0.526472 7.3:-41307650 MS.gene89831:CDS
TGTGTGAACAAGTGCGGTGG+TGG 0.526944 7.3:-41307525 MS.gene89831:CDS
ATCTTCAAACACGCGATACC+AGG 0.527301 7.3:-41302972 MS.gene89831:CDS
GATCTCATGGCAAATCCTAA+AGG 0.535500 7.3:+41306945 None:intergenic
GTGGCTCGAGTTGTAAGTGT+CGG 0.536736 7.3:-41307651 MS.gene89831:CDS
TTCCAGGGTATAATGTATGC+AGG 0.540927 7.3:-41306096 MS.gene89831:intron
CCTCCAACATATCAAAAGGA+AGG 0.542894 7.3:+41307148 None:intergenic
AGTGTTGGAAATGATGATAA+TGG 0.543927 7.3:-41307336 MS.gene89831:CDS
GTTGGAGGCTGCTAAGACTG+TGG 0.546763 7.3:-41307133 MS.gene89831:CDS
AATTCTATCGTACTTACAGC+AGG 0.548443 7.3:+41307429 None:intergenic
GGCGGAGCAGGAGATGGCGG+TGG 0.549808 7.3:-41307270 MS.gene89831:CDS
GGATGTGGTATTATAGGCCA+AGG 0.552476 7.3:-41306063 MS.gene89831:CDS
CATGTGCATGTCGCAGCCGC+CGG 0.556713 7.3:-41307463 MS.gene89831:CDS
TGCAGATCTTCTTGTTGGGA+CGG 0.558342 7.3:-41306603 MS.gene89831:CDS
GTATTTGAAGCTGAAAGGCC+AGG 0.561879 7.3:-41306247 MS.gene89831:CDS
GTTGACTGGGCTAGGTGGAG+TGG 0.562706 7.3:-41302827 MS.gene89831:CDS
ACAGCAGGCTGTGAATCAGC+CGG 0.563170 7.3:+41307444 None:intergenic
GGAAAACCATCAATATCTAA+GGG 0.572801 7.3:-41306533 MS.gene89831:CDS
ATACCAGGTCATCAATGGAC+TGG 0.578972 7.3:-41302957 MS.gene89831:CDS
CGGCGGCTGCGACATGCACA+TGG 0.579440 7.3:+41307464 None:intergenic
AAGCATAGAACATGATCTCA+TGG 0.582119 7.3:+41306932 None:intergenic
TGCACAGAAAATCTACATCC+TGG 0.582715 7.3:+41306229 None:intergenic
GCAGTGTATTTGAAGCTGAA+AGG 0.583183 7.3:-41306252 MS.gene89831:intron
TTTGCAAACAATGTTTATGG+TGG 0.584674 7.3:-41302860 MS.gene89831:CDS
AGTGGCGGAGCAGGAGATGG+CGG 0.585593 7.3:-41307273 MS.gene89831:CDS
GGTAATGGAAGCTTTGGAAG+TGG 0.586739 7.3:-41307291 MS.gene89831:CDS
GAGTCGGATTCCAAGAGTGT+TGG 0.595342 7.3:-41307351 MS.gene89831:CDS
AGAGCAGCACTCTTCAAAAG+AGG 0.596155 7.3:+41303935 None:intergenic
CCATGCAGGTGTGTTCCTTG+GGG 0.596783 7.3:-41302996 MS.gene89831:intron
GTTCCAGTCCATTGATGACC+TGG 0.603834 7.3:+41302954 None:intergenic
CTCCAACATATCAAAAGGAA+GGG 0.605068 7.3:+41307149 None:intergenic
GTTGCTGAATATCAAAAGAG+AGG 0.607008 7.3:-41306659 MS.gene89831:CDS
AGTACGATAGAATTATCGGA+AGG 0.623310 7.3:-41307420 MS.gene89831:CDS
ATGACGAGTAGTAACCTGCT+AGG 0.624592 7.3:+41306473 None:intergenic
TTGGAGGCTGCTAAGACTGT+GGG 0.625642 7.3:-41307132 MS.gene89831:CDS
AAGCTTTCTGCATATTACCA+AGG 0.627406 7.3:+41306507 None:intergenic
GATGATGACGACAAAGATGA+GGG 0.627798 7.3:-41307234 MS.gene89831:CDS
GAGTGCGATGTTGTTGAATG+AGG 0.634613 7.3:-41307565 MS.gene89831:CDS
GTTGTGTTTGATGGTAGTGG+TGG 0.634972 7.3:-41307312 MS.gene89831:CDS
CGAGGTATTGAGAGAGACAG+AGG 0.635942 7.3:-41307184 MS.gene89831:CDS
TTTGGTAGAAGCATCGCCAA+TGG 0.639236 7.3:-41302930 MS.gene89831:CDS
AATGGAAGCTTTGGAAGTGG+CGG 0.641690 7.3:-41307288 MS.gene89831:CDS
GTACGATAGAATTATCGGAA+GGG 0.641710 7.3:-41307419 MS.gene89831:CDS
GCAGGCTGTGAATCAGCCGG+CGG 0.654169 7.3:+41307447 None:intergenic
TGATGATGACGACAAAGATG+AGG 0.654615 7.3:-41307235 MS.gene89831:CDS
CAGGAACATAAAGACATCAG+AGG 0.657150 7.3:-41303975 MS.gene89831:CDS
GTGAAAGCCAGAGCAACTGG+TGG 0.659608 7.3:+41302896 None:intergenic
ACGATAGAATTATCGGAAGG+GGG 0.659659 7.3:-41307417 MS.gene89831:CDS
GCAGCACTCTTCAAAAGAGG+TGG 0.662234 7.3:+41303938 None:intergenic
TCGGGAAAGAAGCTGGTTTG+GGG 0.662291 7.3:-41307632 MS.gene89831:CDS
TGATGACGACAAAGATGAGG+GGG 0.669601 7.3:-41307232 MS.gene89831:CDS
ATGATGACGACAAAGATGAG+GGG 0.689880 7.3:-41307233 MS.gene89831:CDS
AGTTTGTTGACTGGGCTAGG+TGG 0.701181 7.3:-41302832 MS.gene89831:CDS
GCGTGTTTGAAGATACCCCA+AGG 0.708255 7.3:+41302981 None:intergenic
GCAATTTGTGTGAACAAGTG+CGG 0.709591 7.3:-41307531 MS.gene89831:CDS
ACATGATAATGACTGCAAAG+CGG 0.721151 7.3:-41306032 MS.gene89831:intron
TTGAGAGAGACAGAGGCACG+CGG 0.729175 7.3:-41307177 MS.gene89831:CDS
GCCAATGCTAAAATACGACG+AGG 0.732644 7.3:-41307202 MS.gene89831:CDS
ATTTGTGTGAACAAGTGCGG+TGG 0.742292 7.3:-41307528 MS.gene89831:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTGAATAAAAATAAA+TGG + chr7.3:41306663-41306682 None:intergenic 10.0%
!! TATATATATATATATATCAG+CGG + chr7.3:41304781-41304800 None:intergenic 10.0%
!! TTAATTTACATTAAAATCAA+TGG - chr7.3:41305514-41305533 MS.gene89831:intron 10.0%
!! TTAATTTACATTAAAATCAA+TGG + chr7.3:41305533-41305514 None:intergenic 10.0%
!!! AAGAATAAAACTTTTTTTTA+AGG + chr7.3:41305258-41305277 None:intergenic 10.0%
!!! CAATTAAATTCATTTTTTAT+GGG - chr7.3:41305209-41305228 MS.gene89831:intron 10.0%
!!! TCAATTAAATTCATTTTTTA+TGG - chr7.3:41305208-41305227 MS.gene89831:intron 10.0%
!!! TTGATTTTAATGTAAATTAA+TGG - chr7.3:41304879-41304898 MS.gene89831:intron 10.0%
!!! TTGATTTTAATGTAAATTAA+TGG + chr7.3:41304898-41304879 None:intergenic 10.0%
!!! TTTATTTTTATTCAGTTATT+AGG - chr7.3:41306663-41306682 MS.gene89831:CDS 10.0%
!! ATATATATATATATAGAGGA+GGG - chr7.3:41304806-41304825 MS.gene89831:intron 15.0%
!! ATATATATATATATATGAGG+AGG + chr7.3:41305588-41305607 None:intergenic 15.0%
!! TAATCTTCTATTGAATAAAA+TGG - chr7.3:41305340-41305359 MS.gene89831:intron 15.0%
!! TATATATATATATATAGAGG+AGG - chr7.3:41304805-41304824 MS.gene89831:intron 15.0%
!! TATATATATATATATGAGGA+GGG + chr7.3:41305587-41305606 None:intergenic 15.0%
!! TGCTGTTAAATTAAATAAAA+AGG + chr7.3:41305377-41305396 None:intergenic 15.0%
!! TTTATTCAATAGAAGATTAA+AGG + chr7.3:41305339-41305358 None:intergenic 15.0%
!!! TATGTTTGTATAATTTTCAA+TGG - chr7.3:41303672-41303691 MS.gene89831:intron 15.0%
!! AATCTTGATTCTCAAATTAA+TGG - chr7.3:41304974-41304993 MS.gene89831:intron 20.0%
!! CTATACAAAAACAATAAACA+AGG - chr7.3:41305741-41305760 MS.gene89831:intron 20.0%
!! TTACATTAAAATCAATGGTT+AGG + chr7.3:41304874-41304893 None:intergenic 20.0%
!!! TTATTTTCTCAAATTATCAC+TGG - chr7.3:41307172-41307191 MS.gene89831:CDS 20.0%
!!! TTTAGGTTATCTATATGAAT+AGG - chr7.3:41305128-41305147 MS.gene89831:intron 20.0%
! AAATATTGACACCAAAAACA+AGG + chr7.3:41304061-41304080 None:intergenic 25.0%
! AAGTCATAAATCAACTGTAA+AGG + chr7.3:41307011-41307030 None:intergenic 25.0%
! AATATGCAGAAAAATGATCA+CGG + chr7.3:41305103-41305122 None:intergenic 25.0%
! AATTGACACTTATATCAATC+AGG + chr7.3:41305698-41305717 None:intergenic 25.0%
! AGATCAATCATAACAAATCT+TGG + chr7.3:41307376-41307395 None:intergenic 25.0%
! AGTAATAAAACCTTATGCTA+GGG - chr7.3:41305467-41305486 MS.gene89831:intron 25.0%
! CGTGAAAACAATCTAAATAA+TGG + chr7.3:41305420-41305439 None:intergenic 25.0%
! TAAAATCAATGGTTAGGATT+TGG + chr7.3:41304868-41304887 None:intergenic 25.0%
! TAAACAAGGAATGTTTGAAT+TGG - chr7.3:41305755-41305774 MS.gene89831:intron 25.0%
! TAACTCTTTATACTTACTCT+TGG - chr7.3:41305550-41305569 MS.gene89831:intron 25.0%
! TAACTCTTTATACTTACTCT+TGG + chr7.3:41305569-41305550 None:intergenic 25.0%
! TCTTCTTAGATATTTGGATT+TGG - chr7.3:41303401-41303420 MS.gene89831:intron 25.0%
! TGACTTCATTATATGAACTA+AGG - chr7.3:41306029-41306048 MS.gene89831:intron 25.0%
! TGAGTGCAAGATTATTTATT+TGG - chr7.3:41304321-41304340 MS.gene89831:intron 25.0%
! TGTAAGTACGATAGAATTAT+CGG - chr7.3:41303071-41303090 MS.gene89831:intron 25.0%
! TTACATTAAAATCAATGGCT+AGG - chr7.3:41305519-41305538 MS.gene89831:intron 25.0%
! TTATCTATATGAATAGGCAA+AGG - chr7.3:41305134-41305153 MS.gene89831:intron 25.0%
! TTATGATATTCTCAATTGCA+GGG - chr7.3:41303517-41303536 MS.gene89831:intron 25.0%
! TTTACCTCAACTTAATTCAT+AGG + chr7.3:41306696-41306715 None:intergenic 25.0%
! TTTATGATATTCTCAATTGC+AGG - chr7.3:41303516-41303535 MS.gene89831:intron 25.0%
!! ATAGAGCTTTATATGAAAAG+TGG + chr7.3:41305725-41305744 None:intergenic 25.0%
!! TAGAGCTTTATATGAAAAGT+GGG + chr7.3:41305724-41305743 None:intergenic 25.0%
!! TCATTCATTGTTTCTTATTG+AGG + chr7.3:41305034-41305053 None:intergenic 25.0%
!! TTTACCTATGAATTAAGTTG+AGG - chr7.3:41306689-41306708 MS.gene89831:CDS 25.0%
!! TTTCTGCATATTTCGATTTT+AGG - chr7.3:41305111-41305130 MS.gene89831:intron 25.0%
!!! AAACATGTCAGTTTTTTGTT+TGG - chr7.3:41306121-41306140 MS.gene89831:intron 25.0%
!!! TATTTACTGAGAAGTATTCA+AGG - chr7.3:41305657-41305676 MS.gene89831:intron 25.0%
!!! TTTCTGTGTAGTTGTTATTT+AGG + chr7.3:41304956-41304975 None:intergenic 25.0%
AAACAAGATGATCATTACCT+AGG - chr7.3:41303478-41303497 MS.gene89831:intron 30.0%
AATGGACATTTCTATTTCCA+GGG - chr7.3:41304384-41304403 MS.gene89831:intron 30.0%
AGTATCATTCAGTATGAACA+TGG + chr7.3:41306433-41306452 None:intergenic 30.0%
ATTATATTAGAAGATCCGCA+TGG + chr7.3:41304751-41304770 None:intergenic 30.0%
ATTATGACTATCGACAAACA+AGG + chr7.3:41306728-41306747 None:intergenic 30.0%
CAAATTAATGGCTTACTCTT+TGG - chr7.3:41304986-41305005 MS.gene89831:intron 30.0%
CAATGAGTGTTTCATTTGAA+TGG - chr7.3:41304366-41304385 MS.gene89831:intron 30.0%
CATATAATGAAGTCACACTT+TGG + chr7.3:41306024-41306043 None:intergenic 30.0%
CTAACAAGTTATGTGCAATA+TGG - chr7.3:41307346-41307365 MS.gene89831:CDS 30.0%
CTGAAGACAAAAAAGCAATT+AGG + chr7.3:41304179-41304198 None:intergenic 30.0%
CTGATTGTCAGATATATGAT+TGG + chr7.3:41304581-41304600 None:intergenic 30.0%
CTGTTCAATAAAATCAGTTC+TGG + chr7.3:41306872-41306891 None:intergenic 30.0%
CTTCTATTGAATAAAATGGC+TGG - chr7.3:41305344-41305363 MS.gene89831:intron 30.0%
GAAAACTATATACTATTCGC+TGG - chr7.3:41305064-41305083 MS.gene89831:intron 30.0%
GAACAAAATACATGTCAAGT+TGG + chr7.3:41307454-41307473 None:intergenic 30.0%
GAGTAATAAAACCTTATGCT+AGG - chr7.3:41305466-41305485 MS.gene89831:intron 30.0%
GGAAAACCATCAATATCTAA+GGG - chr7.3:41303962-41303981 MS.gene89831:CDS 30.0%
GTCAGATATATGATTGGAAA+GGG + chr7.3:41304575-41304594 None:intergenic 30.0%
GTTGCTTCTTCTTAGATATT+TGG - chr7.3:41303395-41303414 MS.gene89831:intron 30.0%
TAAAATCAATGGCTAGGATT+TGG - chr7.3:41305525-41305544 MS.gene89831:intron 30.0%
TACTCGTCATGACATTAAAA+GGG - chr7.3:41304035-41304054 MS.gene89831:intron 30.0%
TATCTAAGAAGAAGCAACTT+CGG + chr7.3:41303393-41303412 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+TGG - chr7.3:41304618-41304637 MS.gene89831:intron 30.0%
TCTTAGATATTTGGATTTGG+AGG - chr7.3:41303404-41303423 MS.gene89831:intron 30.0%
TGATTAGAGAGAAGGAAAAA+AGG + chr7.3:41307065-41307084 None:intergenic 30.0%
TGCAAACTATGTAATGACAA+CGG + chr7.3:41304505-41304524 None:intergenic 30.0%
TGGAAAACCATCAATATCTA+AGG - chr7.3:41303961-41303980 MS.gene89831:CDS 30.0%
TGTCAGATATATGATTGGAA+AGG + chr7.3:41304576-41304595 None:intergenic 30.0%
TTATGACTATCGACAAACAA+GGG + chr7.3:41306727-41306746 None:intergenic 30.0%
TTTGCAAACAATGTTTATGG+TGG - chr7.3:41307635-41307654 MS.gene89831:CDS 30.0%
! AGTGTTGGAAATGATGATAA+TGG - chr7.3:41303159-41303178 MS.gene89831:intron 30.0%
! CCAGCATTTCTTTTCAAAAT+TGG - chr7.3:41303607-41303626 MS.gene89831:intron 30.0%
! CGTTTTGCAAACAATGTTTA+TGG - chr7.3:41307632-41307651 MS.gene89831:CDS 30.0%
! GAAAATTTTGGATAGTGAGT+CGG - chr7.3:41303128-41303147 MS.gene89831:intron 30.0%
! GAATTTTCCAATAGCATACA+TGG + chr7.3:41303445-41303464 None:intergenic 30.0%
! GCTTTTTGCTTGACATAAAT+AGG - chr7.3:41306051-41306070 MS.gene89831:CDS 30.0%
! TCTAAAATGACATGAAAGTC+AGG - chr7.3:41304143-41304162 MS.gene89831:intron 30.0%
! TTAAATGTAATCGAAAGTGC+CGG + chr7.3:41307146-41307165 None:intergenic 30.0%
!! CCAATTTTGAAAAGAAATGC+TGG + chr7.3:41303610-41303629 None:intergenic 30.0%
!! GTAGTTGTTATTTAGGAAGA+AGG + chr7.3:41304949-41304968 None:intergenic 30.0%
!! GTTTTAGTAGTTTGAGTTTC+AGG - chr7.3:41302908-41302927 MS.gene89831:CDS 30.0%
!!! AATAAATGGTTGCTGTTTTC+TGG + chr7.3:41306649-41306668 None:intergenic 30.0%
!!! CAGTTTTTTGTTTGGAAACT+CGG - chr7.3:41306129-41306148 MS.gene89831:intron 30.0%
!!! GACTTTCATGTCATTTTAGA+TGG + chr7.3:41304143-41304162 None:intergenic 30.0%
AACAACAACGTTAAACTCCT+AGG + chr7.3:41303498-41303517 None:intergenic 35.0%
AAGCATAGAACATGATCTCA+TGG + chr7.3:41303566-41303585 None:intergenic 35.0%
AAGCTTTCTGCATATTACCA+AGG + chr7.3:41303991-41304010 None:intergenic 35.0%
AATTCTATCGTACTTACAGC+AGG + chr7.3:41303069-41303088 None:intergenic 35.0%
ACTGTGTAGTTCAATTAGAG+TGG - chr7.3:41306958-41306977 MS.gene89831:CDS 35.0%
ACTTGGAACATACTTCTTCA+AGG - chr7.3:41304295-41304314 MS.gene89831:intron 35.0%
AGGAATCCCTTAGATATTGA+TGG + chr7.3:41303971-41303990 None:intergenic 35.0%
AGTACGATAGAATTATCGGA+AGG - chr7.3:41303075-41303094 MS.gene89831:intron 35.0%
ATACTTACTCTTGGAGTCAA+TGG - chr7.3:41305559-41305578 MS.gene89831:intron 35.0%
ATACTTACTCTTGGAGTCAA+TGG + chr7.3:41305578-41305559 None:intergenic 35.0%
ATCATCATTTCCAACACTCT+TGG + chr7.3:41303157-41303176 None:intergenic 35.0%
ATCTAAGAAGAAGCAACTTC+GGG + chr7.3:41303392-41303411 None:intergenic 35.0%
ATCTGACAATCAGAAATGCT+AGG - chr7.3:41304588-41304607 MS.gene89831:intron 35.0%
ATGTTGCAGATCTTCTTGTT+GGG - chr7.3:41303888-41303907 MS.gene89831:intron 35.0%
CAACACTAACACATAAACAC+CGG + chr7.3:41307194-41307213 None:intergenic 35.0%
CACTAGTAATGACTAGCATA+GGG - chr7.3:41304913-41304932 MS.gene89831:intron 35.0%
CGGATTACTTAAGATAGAGA+AGG + chr7.3:41303769-41303788 None:intergenic 35.0%
CTACTCGTCATGACATTAAA+AGG - chr7.3:41304034-41304053 MS.gene89831:intron 35.0%
CTCCAACATATCAAAAGGAA+GGG + chr7.3:41303349-41303368 None:intergenic 35.0%
CTGCGTATCATGAGTTAAAT+CGG + chr7.3:41303789-41303808 None:intergenic 35.0%
GAATGGACATTTCTATTTCC+AGG - chr7.3:41304383-41304402 MS.gene89831:intron 35.0%
GACTATTTGAGCTTATCTAC+CGG - chr7.3:41305777-41305796 MS.gene89831:intron 35.0%
GCTTGACATAAATAGGTTCT+AGG - chr7.3:41306058-41306077 MS.gene89831:CDS 35.0%
GGATTTGGATGTGGTATTAT+AGG - chr7.3:41304426-41304445 MS.gene89831:intron 35.0%
GTACGATAGAATTATCGGAA+GGG - chr7.3:41303076-41303095 MS.gene89831:intron 35.0%
GTGACAACAATTCTTGTGTT+GGG + chr7.3:41306253-41306272 None:intergenic 35.0%
GTTGCTGAATATCAAAAGAG+AGG - chr7.3:41303836-41303855 MS.gene89831:intron 35.0%
TACGATAGAATTATCGGAAG+GGG - chr7.3:41303077-41303096 MS.gene89831:intron 35.0%
TATGTTGCAGATCTTCTTGT+TGG - chr7.3:41303887-41303906 MS.gene89831:intron 35.0%
TCAATATCTAAGGGATTCCT+TGG - chr7.3:41303971-41303990 MS.gene89831:CDS 35.0%
TCAATGTGTGTTGAACAGTT+TGG - chr7.3:41304646-41304665 MS.gene89831:intron 35.0%
TCACTAGTAATGACTAGCAT+AGG - chr7.3:41304912-41304931 MS.gene89831:intron 35.0%
TTATCATGTTTGCAATGCCT+TGG + chr7.3:41304452-41304471 None:intergenic 35.0%
! AAAAGAGAGGCAAAGACTTT+TGG - chr7.3:41303849-41303868 MS.gene89831:intron 35.0%
! ACATGATAATGACTGCAAAG+CGG - chr7.3:41304463-41304482 MS.gene89831:intron 35.0%
! ACTTTGCTATGGCTTCAATT+GGG + chr7.3:41306216-41306235 None:intergenic 35.0%
! AGAGCACTTAGTCAAAGAAT+TGG + chr7.3:41303722-41303741 None:intergenic 35.0%
! CATATTTTCGTAAGCTCTCT+TGG - chr7.3:41305877-41305896 MS.gene89831:intron 35.0%
! CTTTTGATATTCAGCAACAG+TGG + chr7.3:41303834-41303853 None:intergenic 35.0%
! GGGAAAGGAACAGAAAATTT+TGG - chr7.3:41303116-41303135 MS.gene89831:intron 35.0%
! TACCCTTCCTTTTGATATGT+TGG - chr7.3:41303344-41303363 MS.gene89831:intron 35.0%
! TCTAGGAGCAGATTTTAAAC+AGG - chr7.3:41306075-41306094 MS.gene89831:CDS 35.0%
!! GATAATGGTGTTGTGTTTGA+TGG - chr7.3:41303174-41303193 MS.gene89831:intron 35.0%
!! GTTGTTAATGTTGCTTTGGT+TGG - chr7.3:41303914-41303933 MS.gene89831:intron 35.0%
!! TCTTTTCAAAATTGGCTCAG+AGG - chr7.3:41303615-41303634 MS.gene89831:intron 35.0%
!!! CATTAAAAGGGCCTTGTTTT+TGG - chr7.3:41304047-41304066 MS.gene89831:intron 35.0%
AACCTTATGCTAGGGATTAG+TGG - chr7.3:41305475-41305494 MS.gene89831:intron 40.0%
AAGCACTTGTGAGACTCTTT+GGG - chr7.3:41305803-41305822 MS.gene89831:intron 40.0%
ACAAAGATGAGGGGGAATTT+GGG - chr7.3:41303271-41303290 MS.gene89831:intron 40.0%
ACAAGAATTGTTGTCACCTG+GGG - chr7.3:41306256-41306275 MS.gene89831:intron 40.0%
ACACAAGAATTGTTGTCACC+TGG - chr7.3:41306254-41306273 MS.gene89831:intron 40.0%
ACACATAAACACCGGTGATA+TGG + chr7.3:41307220-41307239 None:intergenic 40.0%
ACGATAGAATTATCGGAAGG+GGG - chr7.3:41303078-41303097 MS.gene89831:intron 40.0%
AGTTCAATTAGAGTGGTGGT+TGG - chr7.3:41306965-41306984 MS.gene89831:intron 40.0%
ATAATGACTGCAAAGCGGTA+TGG - chr7.3:41304468-41304487 MS.gene89831:intron 40.0%
CACAAGAATTGTTGTCACCT+GGG - chr7.3:41306255-41306274 MS.gene89831:intron 40.0%
CACTTGTTCACACAAATTGC+TGG + chr7.3:41302964-41302983 None:intergenic 40.0%
CAGGAACATAAAGACATCAG+AGG - chr7.3:41306520-41306539 MS.gene89831:CDS 40.0%
CCAATAGGATTAAACCCATG+TGG + chr7.3:41304682-41304701 None:intergenic 40.0%
CCACATGGGTTTAATCCTAT+TGG - chr7.3:41304679-41304698 MS.gene89831:intron 40.0%
CCTCCAACATATCAAAAGGA+AGG + chr7.3:41303350-41303369 None:intergenic 40.0%
CTCTGATGTCTTTATGTTCC+TGG + chr7.3:41306522-41306541 None:intergenic 40.0%
GAGAGAAGGAAAAAAGGAAG+AGG + chr7.3:41307059-41307078 None:intergenic 40.0%
GAGATGTCCATGTATGCTAT+TGG - chr7.3:41303435-41303454 MS.gene89831:intron 40.0%
GATCTCATGGCAAATCCTAA+AGG + chr7.3:41303553-41303572 None:intergenic 40.0%
GCAATTTGTGTGAACAAGTG+CGG - chr7.3:41302964-41302983 MS.gene89831:CDS 40.0%
GGTATAATGTATGCAGGTGT+TGG - chr7.3:41304405-41304424 MS.gene89831:intron 40.0%
GGTGACAACAATTCTTGTGT+TGG + chr7.3:41306254-41306273 None:intergenic 40.0%
GTGTAGTTCAATTAGAGTGG+TGG - chr7.3:41306961-41306980 MS.gene89831:intron 40.0%
GTTTAATCCTATTGGAGAGC+AGG - chr7.3:41304687-41304706 MS.gene89831:intron 40.0%
TAAGCACTTGTGAGACTCTT+TGG - chr7.3:41305802-41305821 MS.gene89831:intron 40.0%
TAGTGTTGTGTCCATATCAC+CGG - chr7.3:41307206-41307225 MS.gene89831:CDS 40.0%
TGCACAGAAAATCTACATCC+TGG + chr7.3:41304269-41304288 None:intergenic 40.0%
TTCCAGGGTATAATGTATGC+AGG - chr7.3:41304399-41304418 MS.gene89831:intron 40.0%
TTGGAAATGAGTCTCCACAT+GGG - chr7.3:41304665-41304684 MS.gene89831:intron 40.0%
TTGGTCAACGCAATTATGAG+AGG - chr7.3:41304340-41304359 MS.gene89831:intron 40.0%
TTGTTTGGAAACTCGGTATC+TGG - chr7.3:41306136-41306155 MS.gene89831:intron 40.0%
TTTAACACCTGCTCTCCAAT+AGG + chr7.3:41304697-41304716 None:intergenic 40.0%
TTTGGAAATGAGTCTCCACA+TGG - chr7.3:41304664-41304683 MS.gene89831:intron 40.0%
! AAGTGATAGTGTTGTGGGAA+AGG - chr7.3:41303101-41303120 MS.gene89831:intron 40.0%
! ATGATGACGACAAAGATGAG+GGG - chr7.3:41303262-41303281 MS.gene89831:intron 40.0%
! CCTTCCTTTTGATATGTTGG+AGG - chr7.3:41303347-41303366 MS.gene89831:intron 40.0%
! CGGGTTGTTCATCGAATTTT+GGG - chr7.3:41302821-41302840 MS.gene89831:CDS 40.0%
! CTCAATTGCAGGGATCTTTT+TGG - chr7.3:41303527-41303546 MS.gene89831:intron 40.0%
! CTGAAGTGCTAGTACTACAT+TGG + chr7.3:41307097-41307116 None:intergenic 40.0%
! GAAATTTTTAACAACCCCCC+AGG + chr7.3:41306376-41306395 None:intergenic 40.0%
! GACGGTTGTTAATGTTGCTT+TGG - chr7.3:41303910-41303929 MS.gene89831:intron 40.0%
! GACTTTGCTATGGCTTCAAT+TGG + chr7.3:41306217-41306236 None:intergenic 40.0%
! GATGATGACGACAAAGATGA+GGG - chr7.3:41303261-41303280 MS.gene89831:intron 40.0%
! GATTGTTTTCACGTGTAGTC+AGG - chr7.3:41305427-41305446 MS.gene89831:intron 40.0%
! GCAGTGTATTTGAAGCTGAA+AGG - chr7.3:41304243-41304262 MS.gene89831:intron 40.0%
! GGGTTGTTCATCGAATTTTG+GGG - chr7.3:41302822-41302841 MS.gene89831:CDS 40.0%
! GGTTTTCCAATTCGAGCATA+AGG + chr7.3:41303950-41303969 None:intergenic 40.0%
! TGATGATGACGACAAAGATG+AGG - chr7.3:41303260-41303279 MS.gene89831:intron 40.0%
!! AGTCACACTTTGGCTCTATT+TGG + chr7.3:41306014-41306033 None:intergenic 40.0%
!! ATGTATGCAGGTGTTGGATT+TGG - chr7.3:41304411-41304430 MS.gene89831:intron 40.0%
!! TGTTGCTTTGGTTGGAATGT+TGG - chr7.3:41303922-41303941 MS.gene89831:intron 40.0%
!! TTGTTCATCGAATTTTGGGG+TGG - chr7.3:41302825-41302844 MS.gene89831:CDS 40.0%
!! TTGTTTTGTGCTACGAAGCA+CGG + chr7.3:41307273-41307292 None:intergenic 40.0%
!! TTTGAAGAGTGCTGCTCTTT+GGG - chr7.3:41306565-41306584 MS.gene89831:CDS 40.0%
!! TTTGATGGTAGTGGTGGTAA+TGG - chr7.3:41303189-41303208 MS.gene89831:intron 40.0%
!!! ACCTCGTCGTATTTTAGCAT+TGG + chr7.3:41303297-41303316 None:intergenic 40.0%
!!! TTTTGAAGAGTGCTGCTCTT+TGG - chr7.3:41306564-41306583 MS.gene89831:CDS 40.0%
AACACACCTGCATGGATGTT+CGG + chr7.3:41307494-41307513 None:intergenic 45.0%
AATCCTACTGTCCAGTAGAG+GGG - chr7.3:41306186-41306205 MS.gene89831:intron 45.0%
AGAGCAGCACTCTTCAAAAG+AGG + chr7.3:41306563-41306582 None:intergenic 45.0%
AGCCATAGCAAAGTCCTGTA+TGG - chr7.3:41306222-41306241 MS.gene89831:CDS 45.0%
AGTCTCACAAGTGCTTATGC+CGG + chr7.3:41305799-41305818 None:intergenic 45.0%
ATACCAGGTCATCAATGGAC+TGG - chr7.3:41307538-41307557 MS.gene89831:CDS 45.0%
ATCTTCAAACACGCGATACC+AGG - chr7.3:41307523-41307542 MS.gene89831:CDS 45.0%
ATGACGAGTAGTAACCTGCT+AGG + chr7.3:41304025-41304044 None:intergenic 45.0%
ATGGCCAATTGTCAGATGAG+GGG + chr7.3:41304732-41304751 None:intergenic 45.0%
ATTTGTGTGAACAAGTGCGG+TGG - chr7.3:41302967-41302986 MS.gene89831:CDS 45.0%
CAAGAATTGTTGTCACCTGG+GGG - chr7.3:41306257-41306276 MS.gene89831:intron 45.0%
CAATCCTACTGTCCAGTAGA+GGG - chr7.3:41306185-41306204 MS.gene89831:intron 45.0%
CACCACTAATCCCTAGCATA+AGG + chr7.3:41305480-41305499 None:intergenic 45.0%
CACCTGCATACATTATACCC+TGG + chr7.3:41304404-41304423 None:intergenic 45.0%
CATGGCCAATTGTCAGATGA+GGG + chr7.3:41304733-41304752 None:intergenic 45.0%
CTCTTCAAAAGAGGTGGTAC+AGG + chr7.3:41306554-41306573 None:intergenic 45.0%
CTTATGCAGCTTTACCTAGC+AGG - chr7.3:41304008-41304027 MS.gene89831:intron 45.0%
GACAAAGATGAGGGGGAATT+TGG - chr7.3:41303270-41303289 MS.gene89831:intron 45.0%
GAGTGCGATGTTGTTGAATG+AGG - chr7.3:41302930-41302949 MS.gene89831:CDS 45.0%
GCAGCCTCCAACATATCAAA+AGG + chr7.3:41303354-41303373 None:intergenic 45.0%
GCCAATGCTAAAATACGACG+AGG - chr7.3:41303293-41303312 MS.gene89831:intron 45.0%
GCTAGTACTACATTGGTCGT+CGG + chr7.3:41307090-41307109 None:intergenic 45.0%
GGATGTGGTATTATAGGCCA+AGG - chr7.3:41304432-41304451 MS.gene89831:intron 45.0%
GGATTCGAACATGAGATCTG+GGG - chr7.3:41306278-41306297 MS.gene89831:intron 45.0%
GGGATTCGAACATGAGATCT+GGG - chr7.3:41306277-41306296 MS.gene89831:intron 45.0%
GTCCATACAGGACTTTGCTA+TGG + chr7.3:41306227-41306246 None:intergenic 45.0%
GTGCTTCGTAGCACAAAACA+AGG - chr7.3:41307272-41307291 MS.gene89831:CDS 45.0%
TAGGTGGAGTGGAGTACAAT+AGG - chr7.3:41307679-41307698 MS.gene89831:CDS 45.0%
TATGCTTCGCAATCGAATGC+TGG - chr7.3:41303579-41303598 MS.gene89831:intron 45.0%
TCATCTGACAATTGGCCATG+CGG - chr7.3:41304733-41304752 MS.gene89831:intron 45.0%
TGCAGATCTTCTTGTTGGGA+CGG - chr7.3:41303892-41303911 MS.gene89831:intron 45.0%
TGTTCCTGGTAGCAAAGAAG+AGG + chr7.3:41306508-41306527 None:intergenic 45.0%
TTCGAACATGAGACCTAGAG+AGG - chr7.3:41306302-41306321 MS.gene89831:intron 45.0%
TTGGCACCTTATGCTCGAAT+TGG - chr7.3:41303941-41303960 MS.gene89831:CDS 45.0%
! CAATGCAGAGTGTCTGAACA+TGG + chr7.3:41304550-41304569 None:intergenic 45.0%
! GATTGGTCCCCAAGATTAGA+CGG + chr7.3:41306170-41306189 None:intergenic 45.0%
! GGTGTTGTGTTTGATGGTAG+TGG - chr7.3:41303180-41303199 MS.gene89831:intron 45.0%
! GTATTTGAAGCTGAAAGGCC+AGG - chr7.3:41304248-41304267 MS.gene89831:intron 45.0%
! GTTTTCACGTGTAGTCAGGT+GGG - chr7.3:41305431-41305450 MS.gene89831:intron 45.0%
! TGATGACGACAAAGATGAGG+GGG - chr7.3:41303263-41303282 MS.gene89831:intron 45.0%
! TGTTTTCACGTGTAGTCAGG+TGG - chr7.3:41305430-41305449 MS.gene89831:intron 45.0%
! TTTTAACAACCCCCCAGGAT+TGG + chr7.3:41306371-41306390 None:intergenic 45.0%
! TTTTCTGTGCAGCAGAGACT+TGG - chr7.3:41304278-41304297 MS.gene89831:intron 45.0%
!! AATGGAAGCTTTGGAAGTGG+CGG - chr7.3:41303207-41303226 MS.gene89831:intron 45.0%
!! AGACTCTTTGGGAGAGCTTT+TGG - chr7.3:41305814-41305833 MS.gene89831:intron 45.0%
!! AGTGGTGGTAATGGAAGCTT+TGG - chr7.3:41303198-41303217 MS.gene89831:intron 45.0%
!! CAGGGATCTTTTTGGCCTTT+AGG - chr7.3:41303535-41303554 MS.gene89831:intron 45.0%
!! CATCAATGGACTGGAACGTT+TGG - chr7.3:41307547-41307566 MS.gene89831:CDS 45.0%
!! GCGGGTTGTTCATCGAATTT+TGG - chr7.3:41302820-41302839 MS.gene89831:CDS 45.0%
!! GGTAATGGAAGCTTTGGAAG+TGG - chr7.3:41303204-41303223 MS.gene89831:intron 45.0%
!! GTTGTGTTTGATGGTAGTGG+TGG - chr7.3:41303183-41303202 MS.gene89831:intron 45.0%
!! TGGCATGCAGTTTGTTGACT+GGG - chr7.3:41307655-41307674 MS.gene89831:CDS 45.0%
!! TGTAGTCAGGTGGGTTGTTT+AGG - chr7.3:41305440-41305459 MS.gene89831:intron 45.0%
!! TTGAAGAGTGCTGCTCTTTG+GGG - chr7.3:41306566-41306585 MS.gene89831:CDS 45.0%
!! TTTGGTAGAAGCATCGCCAA+TGG - chr7.3:41307565-41307584 MS.gene89831:CDS 45.0%
!! ATATATATATATATATATAG+AGG - chr7.3:41304802-41304821 MS.gene89831:intron 5.0%
!! TATATATATATATATATATG+AGG + chr7.3:41305591-41305610 None:intergenic 5.0%
AAACTCGGTATCTGGCCCAA+TGG - chr7.3:41306144-41306163 MS.gene89831:intron 50.0%
ACACACCTGCATGGATGTTC+GGG + chr7.3:41307493-41307512 None:intergenic 50.0%
ACGCGATACCAGGTCATCAA+TGG - chr7.3:41307533-41307552 MS.gene89831:CDS 50.0%
ACTGTGAAAGCCAGAGCAAC+TGG + chr7.3:41307605-41307624 None:intergenic 50.0%
AGCACCCCTCATCTGACAAT+TGG - chr7.3:41304725-41304744 MS.gene89831:intron 50.0%
ATCCATGCAGGTGTGTTCCT+TGG - chr7.3:41307497-41307516 MS.gene89831:CDS 50.0%
ATCCTACTGTCCAGTAGAGG+GGG - chr7.3:41306187-41306206 MS.gene89831:intron 50.0%
ATCTCATGTTCGAATCCCCC+AGG + chr7.3:41306275-41306294 None:intergenic 50.0%
CCAATCCTACTGTCCAGTAG+AGG - chr7.3:41306184-41306203 MS.gene89831:intron 50.0%
CCAATGGCCGTCTAATCTTG+GGG - chr7.3:41306160-41306179 MS.gene89831:intron 50.0%
CCCAAGATTAGACGGCCATT+GGG + chr7.3:41306162-41306181 None:intergenic 50.0%
CCCAATGGCCGTCTAATCTT+GGG - chr7.3:41306159-41306178 MS.gene89831:intron 50.0%
CCTCTACTGGACAGTAGGAT+TGG + chr7.3:41306187-41306206 None:intergenic 50.0%
CGTCGGAGTGATTAGAGAGA+AGG + chr7.3:41307073-41307092 None:intergenic 50.0%
CTCACCTCTTCTTTGCTACC+AGG - chr7.3:41306501-41306520 MS.gene89831:CDS 50.0%
GCAGCACTCTTCAAAAGAGG+TGG + chr7.3:41306560-41306579 None:intergenic 50.0%
GCATGGCCAATTGTCAGATG+AGG + chr7.3:41304734-41304753 None:intergenic 50.0%
GCGTGTTTGAAGATACCCCA+AGG + chr7.3:41307517-41307536 None:intergenic 50.0%
GGGGATTCGAACATGAGATC+TGG - chr7.3:41306276-41306295 MS.gene89831:intron 50.0%
TCCATGCAGGTGTGTTCCTT+GGG - chr7.3:41307498-41307517 MS.gene89831:CDS 50.0%
TGCAATCGTGAACTCTCTGC+AGG + chr7.3:41305289-41305308 None:intergenic 50.0%
TGTCGGGAAAGAAGCTGGTT+TGG - chr7.3:41302861-41302880 MS.gene89831:CDS 50.0%
TGTTTCCCGAACATCCATGC+AGG - chr7.3:41307485-41307504 MS.gene89831:CDS 50.0%
TTCACCAACAGGCCAATCCT+GGG - chr7.3:41306356-41306375 MS.gene89831:intron 50.0%
TTGGAGGCTGCTAAGACTGT+GGG - chr7.3:41303363-41303382 MS.gene89831:intron 50.0%
! AGGGGGAAGTGATAGTGTTG+TGG - chr7.3:41303095-41303114 MS.gene89831:intron 50.0%
! GAGTCGGATTCCAAGAGTGT+TGG - chr7.3:41303144-41303163 MS.gene89831:intron 50.0%
! GGGGGAAGTGATAGTGTTGT+GGG - chr7.3:41303096-41303115 MS.gene89831:intron 50.0%
! GTCGGGAAAGAAGCTGGTTT+GGG - chr7.3:41302862-41302881 MS.gene89831:CDS 50.0%
! GTGGCTCGAGTTGTAAGTGT+CGG - chr7.3:41302844-41302863 MS.gene89831:CDS 50.0%
! GTTCCAGTCCATTGATGACC+TGG + chr7.3:41307544-41307563 None:intergenic 50.0%
! TGGCTCGAGTTGTAAGTGTC+GGG - chr7.3:41302845-41302864 MS.gene89831:CDS 50.0%
!! AAAGTGCCGGTGTTGGACAT+CGG + chr7.3:41307133-41307152 None:intergenic 50.0%
!! AGTTTGTTGACTGGGCTAGG+TGG - chr7.3:41307663-41307682 MS.gene89831:CDS 50.0%
!! ATTGTCAGATGAGGGGTGCT+AGG + chr7.3:41304725-41304744 None:intergenic 50.0%
!! CGAGGTATTGAGAGAGACAG+AGG - chr7.3:41303311-41303330 MS.gene89831:intron 50.0%
!! GCAGGTGTTGGATTTGGATG+TGG - chr7.3:41304417-41304436 MS.gene89831:intron 50.0%
!! GTAAGTGTCGGGAAAGAAGC+TGG - chr7.3:41302856-41302875 MS.gene89831:CDS 50.0%
!! GTAATCGAAAGTGCCGGTGT+TGG + chr7.3:41307140-41307159 None:intergenic 50.0%
!! GTCAGGTGGGTTGTTTAGGA+AGG - chr7.3:41305444-41305463 MS.gene89831:intron 50.0%
!! GTGGCATGCAGTTTGTTGAC+TGG - chr7.3:41307654-41307673 MS.gene89831:CDS 50.0%
!! GTTGCTCTGGCTTTCACAGT+TGG - chr7.3:41307605-41307624 MS.gene89831:CDS 50.0%
!! TCGGGAAAGAAGCTGGTTTG+GGG - chr7.3:41302863-41302882 MS.gene89831:CDS 50.0%
!! TGCAGTTTGTTGACTGGGCT+AGG - chr7.3:41307660-41307679 MS.gene89831:CDS 50.0%
!! TGTGTTGGGCTAGTCCATAC+AGG + chr7.3:41306239-41306258 None:intergenic 50.0%
ACAGCAGGCTGTGAATCAGC+CGG + chr7.3:41303054-41303073 None:intergenic 55.0%
ACGAAGCACGGACACATACG+CGG + chr7.3:41307261-41307280 None:intergenic 55.0%
ACGGACACATACGCGGATTC+TGG + chr7.3:41307254-41307273 None:intergenic 55.0%
AGCATCGCCAATGGCAAAGC+AGG - chr7.3:41307574-41307593 MS.gene89831:CDS 55.0%
CCATGCAGGTGTGTTCCTTG+GGG - chr7.3:41307499-41307518 MS.gene89831:CDS 55.0%
CCCCAAGATTAGACGGCCAT+TGG + chr7.3:41306163-41306182 None:intergenic 55.0%
CTTCACCAACAGGCCAATCC+TGG - chr7.3:41306355-41306374 MS.gene89831:intron 55.0%
GCCCAATGGCCGTCTAATCT+TGG - chr7.3:41306158-41306177 MS.gene89831:intron 55.0%
GGTGGAACCTGCTTTGCCAT+TGG + chr7.3:41307584-41307603 None:intergenic 55.0%
GTGAAAGCCAGAGCAACTGG+TGG + chr7.3:41307602-41307621 None:intergenic 55.0%
GTGTGTCCGATGTCCAACAC+CGG - chr7.3:41307124-41307143 MS.gene89831:CDS 55.0%
GTTGGAGGCTGCTAAGACTG+TGG - chr7.3:41303362-41303381 MS.gene89831:intron 55.0%
TAGAGAGGAGCAGACTCCCA+GGG - chr7.3:41306317-41306336 MS.gene89831:intron 55.0%
TCACCAACAGGCCAATCCTG+GGG - chr7.3:41306357-41306376 MS.gene89831:intron 55.0%
TCCTACTGTCCAGTAGAGGG+GGG - chr7.3:41306188-41306207 MS.gene89831:intron 55.0%
TGTGTGAACAAGTGCGGTGG+TGG - chr7.3:41302970-41302989 MS.gene89831:CDS 55.0%
! TGGCCTGTTGGTGAAGGCTT+GGG + chr7.3:41306351-41306370 None:intergenic 55.0%
! TTGAGAGAGACAGAGGCACG+CGG - chr7.3:41303318-41303337 MS.gene89831:intron 55.0%
! TTGGCCTGTTGGTGAAGGCT+TGG + chr7.3:41306352-41306371 None:intergenic 55.0%
!! CAGGATTGGCCTGTTGGTGA+AGG + chr7.3:41306357-41306376 None:intergenic 55.0%
AATTGGGTCCCCCCCTCTAC+TGG + chr7.3:41306200-41306219 None:intergenic 60.0%
ACCAACAGGCCAATCCTGGG+GGG - chr7.3:41306359-41306378 MS.gene89831:intron 60.0%
AGGCTTGGGACCTATAGCCC+TGG + chr7.3:41306337-41306356 None:intergenic 60.0%
CACCAACAGGCCAATCCTGG+GGG - chr7.3:41306358-41306377 MS.gene89831:intron 60.0%
CCCCAAGGAACACACCTGCA+TGG + chr7.3:41307502-41307521 None:intergenic 60.0%
CCTACTGTCCAGTAGAGGGG+GGG - chr7.3:41306189-41306208 MS.gene89831:intron 60.0%
CTAGAGAGGAGCAGACTCCC+AGG - chr7.3:41306316-41306335 MS.gene89831:intron 60.0%
CTGGGAGTCTGCTCCTCTCT+AGG + chr7.3:41306318-41306337 None:intergenic 60.0%
GAGCAGACTCCCAGGGCTAT+AGG - chr7.3:41306324-41306343 MS.gene89831:intron 60.0%
GCAGGTTCCACCAGTTGCTC+TGG - chr7.3:41307592-41307611 MS.gene89831:CDS 60.0%
GGCTTGGGACCTATAGCCCT+GGG + chr7.3:41306336-41306355 None:intergenic 60.0%
GGTCCCAAGCCTTCACCAAC+AGG - chr7.3:41306345-41306364 MS.gene89831:intron 60.0%
! GTTGACTGGGCTAGGTGGAG+TGG - chr7.3:41307668-41307687 MS.gene89831:CDS 60.0%
!! AGCTTTGGAAGTGGCGGAGC+AGG - chr7.3:41303213-41303232 MS.gene89831:intron 60.0%
CATGTGCATGTCGCAGCCGC+CGG - chr7.3:41303032-41303051 MS.gene89831:intron 65.0%
CCCCCCCTCTACTGGACAGT+AGG + chr7.3:41306192-41306211 None:intergenic 65.0%
GCAGGCTGTGAATCAGCCGG+CGG + chr7.3:41303051-41303070 None:intergenic 65.0%
! AGTGGCGGAGCAGGAGATGG+CGG - chr7.3:41303222-41303241 MS.gene89831:intron 65.0%
! GGAAGTGGCGGAGCAGGAGA+TGG - chr7.3:41303219-41303238 MS.gene89831:intron 65.0%
!! ACCCCCCAGGATTGGCCTGT+TGG + chr7.3:41306363-41306382 None:intergenic 65.0%
CGGCGGCTGCGACATGCACA+TGG + chr7.3:41303034-41303053 None:intergenic 70.0%
! GCAGGAGATGGCGGTGGTGG+CGG - chr7.3:41303231-41303250 MS.gene89831:intron 70.0%
! GGAGCAGGAGATGGCGGTGG+TGG - chr7.3:41303228-41303247 MS.gene89831:intron 70.0%
! GGCGGAGCAGGAGATGGCGG+TGG - chr7.3:41303225-41303244 MS.gene89831:intron 75.0%
!! GGAGATGGCGGTGGTGGCGG+TGG - chr7.3:41303234-41303253 MS.gene89831:intron 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 41302817 41307700 41302817 ID=MS.gene89831
chr7.3 mRNA 41302817 41307700 41302817 ID=MS.gene89831.t1;Parent=MS.gene89831
chr7.3 exon 41307092 41307700 41307092 ID=MS.gene89831.t1.exon1;Parent=MS.gene89831.t1
chr7.3 CDS 41307092 41307700 41307092 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41306881 41306979 41306881 ID=MS.gene89831.t1.exon2;Parent=MS.gene89831.t1
chr7.3 CDS 41306881 41306979 41306881 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41306488 41306708 41306488 ID=MS.gene89831.t1.exon3;Parent=MS.gene89831.t1
chr7.3 CDS 41306488 41306708 41306488 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41306201 41306270 41306201 ID=MS.gene89831.t1.exon4;Parent=MS.gene89831.t1
chr7.3 CDS 41306201 41306270 41306201 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41306033 41306112 41306033 ID=MS.gene89831.t1.exon5;Parent=MS.gene89831.t1
chr7.3 CDS 41306033 41306112 41306033 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41303930 41303994 41303930 ID=MS.gene89831.t1.exon6;Parent=MS.gene89831.t1
chr7.3 CDS 41303930 41303994 41303930 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
chr7.3 exon 41302817 41303010 41302817 ID=MS.gene89831.t1.exon7;Parent=MS.gene89831.t1
chr7.3 CDS 41302817 41303010 41302817 ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1
Gene Sequence

>MS.gene89831

ATGGCGGGTTGTTCATCGAATTTTGGGGTGGCTCGAGTTGTAAGTGTCGGGAAAGAAGCTGGTTTGGGGAAGAATGTAAATCAATATTCAAGTTTTAGTAGTTTGAGTTTCAGGAGTGCGATGTTGTTGAATGAGGCTGCATTTCCAGCAATTTGTGTGAACAAGTGCGGTGGTGGATCATATTTGTCTATACAAAAGAAACAAACGTTTTTGACCATGTGCATGTCGCAGCCGCCGGCTGATTCACAGCCTGCTGTAAGTACGATAGAATTATCGGAAGGGGGAAGTGATAGTGTTGTGGGAAAGGAACAGAAAATTTTGGATAGTGAGTCGGATTCCAAGAGTGTTGGAAATGATGATAATGGTGTTGTGTTTGATGGTAGTGGTGGTAATGGAAGCTTTGGAAGTGGCGGAGCAGGAGATGGCGGTGGTGGCGGTGGTGATGATGATGACGACAAAGATGAGGGGGAATTTGGGCCAATGCTAAAATACGACGAGGTATTGAGAGAGACAGAGGCACGCGGCGTTACCCTTCCTTTTGATATGTTGGAGGCTGCTAAGACTGTGGGAATCCCGAAGTTGCTTCTTCTTAGATATTTGGATTTGGAGGTTAGTTTTGAGATGTCCATGTATGCTATTGGAAAATTCATGCTACTGTGCAAAACAAGATGATCATTACCTAGGAGTTTAACGTTGTTGTTTATGATATTCTCAATTGCAGGGATCTTTTTGGCCTTTAGGATTTGCCATGAGATCATGTTCTATGCTTCGCAATCGAATGCTGGCTGATCCAGCATTTCTTTTCAAAATTGGCTCAGAGGTCTGTTTAGATTGTTTTATTGTAATCTGAATTTTTATGTTTGTATAATTTTCAATGGTAGTACTGCAGTATCTTAAGTGATCCAATTCTTTGACTAAGTGCTCTCTGTTTAAAATGATCATATATTAGCCTTCTCTATCTTAAGTAATCCGATTTAACTCATGATACGCAGATCGTAATTGATTCTTGTTGTGCCACTGTTGCTGAATATCAAAAGAGAGGCAAAGACTTTTGGAATGAATTCGAGTTGTATGTTGCAGATCTTCTTGTTGGGACGGTTGTTAATGTTGCTTTGGTTGGAATGTTGGCACCTTATGCTCGAATTGGAAAACCATCAATATCTAAGGGATTCCTTGGTAATATGCAGAAAGCTTATGCAGCTTTACCTAGCAGGTTACTACTCGTCATGACATTAAAAGGGCCTTGTTTTTGGTGTCAATATTTTTGTGTTTCTTATGTATACGTATATAGATATGTTGTATATATAGATATGTAACGATTGTCCATCTAAAATGACATGAAAGTCAGGTTTCTCATATCCTAATTGCTTTTTTGTCTTCAGAGTCTGAAAAAGATTTTCACTAATTTTCTTTTTGCTCACTTTATGCAGTGTATTTGAAGCTGAAAGGCCAGGATGTAGATTTTCTGTGCAGCAGAGACTTGGAACATACTTCTTCAAGGTAATGAGTGCAAGATTATTTATTTGGTCAACGCAATTATGAGAGGTTTCAATGAGTGTTTCATTTGAATGGACATTTCTATTTCCAGGGTATAATGTATGCAGGTGTTGGATTTGGATGTGGTATTATAGGCCAAGGCATTGCAAACATGATAATGACTGCAAAGCGGTATGGTTTCTTGTCTACCGTTGTCATTACATAGTTTGCACGATTTACACACAATGTGTTTTCCATGTTCAGACACTCTGCATTGTTCCCTTTCCAATCATATATCTGACAATCAGAAATGCTAGGATAACTCTCTAATACTCACTCTCTTATTGGAAAAATCAATGTGTGTTGAACAGTTTGGAAATGAGTCTCCACATGGGTTTAATCCTATTGGAGAGCAGGTGTTAAAGTGTTCCTAGCACCCCTCATCTGACAATTGGCCATGCGGATCTTCTAATATAATAACGATTCCGCTGATATATATATATATATATATATATATATATATATATAGAGGAGGGATCCATTGACTCCAAGAGTAAGTATAAAGAGTTACTCCAAATCCTAACCATTGATTTTAATGTAAATTAATGGTTGTGATTAATCACTAGTAATGACTAGCATAGGGTTTTAATGCTCCTTCTTCCTAAATAACAACTACACAGAAATCTTGATTCTCAAATTAATGGCTTACTCTTTGGAACATGTCGTTATATGCTTCTACCTCAATAAGAAACAATGAATGAATCACAAGATGAAAACTATATACTATTCGCTGGAAATCATGCAATTCCGTGATCATTTTTCTGCATATTTCGATTTTAGGTTATCTATATGAATAGGCAAAGGATCTGATTCAATCAAAATAAAATTGATTTTCTATAGAATAAAAAAACTGATTCAATTAAATTCATTTTTTATGGGATTCAATAAATTGTATTCTTCATCCTTAAAAAAAAGTTTTATTCTTCAAATCATCCTGCAGAGAGTTCACGATTGCAAAAGTTCACGATTGAATAAGATTTTTTCCTTTAATCTTCTATTGAATAAAATGGCTGGTGATTTACCTTTTTATTTAATTTAACAGCAAAAGTTGAAAATTGCAATAGCCATTATTTAGATTGTTTTCACGTGTAGTCAGGTGGGTTGTTTAGGAAGGAGTAATAAAACCTTATGCTAGGGATTAGTGGTGATTAATCACAACCATTAATTTACATTAAAATCAATGGCTAGGATTTGGAGTAACTCTTTATACTTACTCTTGGAGTCAATGGATCCCTCCTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTACTGAGAAGTATTCAAGGCATTTGCGCGTAAGACCTGATTGATATAAGTGTCAATTTGACCCACTTTTCATATAAAGCTCTATACAAAAACAATAAACAAGGAATGTTTGAATTGGACTATTTGAGCTTATCTACCGGCATAAGCACTTGTGAGACTCTTTGGGAGAGCTTTTGGACACAACACAACTTATAAAATGTCTTTGAGCTGTTTTCAGCATATTTTCGTAAGCTCTCTTGGATAGCTTACGAAAATAGCTAATAGCTTGTTTGAAAACACTTTGACTTTATTTTATCTTTTGTTATAGTAAATAGCAATAGCTTATGATAAGCTCTTAATTAAGCTGTTTATCCAAATAGAGCCAAAGTGTGACTTCATTATATGAACTAAGGCTTTTTGCTTGACATAAATAGGTTCTAGGAGCAGATTTTAAACAGGCAGCATAGTTTACTGATAACGTTAAACATGTCAGTTTTTTGTTTGGAAACTCGGTATCTGGCCCAATGGCCGTCTAATCTTGGGGACCAATCCTACTGTCCAGTAGAGGGGGGGACCCAATTGAAGCCATAGCAAAGTCCTGTATGGACTAGCCCAACACAAGAATTGTTGTCACCTGGGGGATTCGAACATGAGATCTGGGGATTCGAACATGAGACCTAGAGAGGAGCAGACTCCCAGGGCTATAGGTCCCAAGCCTTCACCAACAGGCCAATCCTGGGGGGTTGTTAAAAATTTCGTATTGACAGTATTTTAAAGTTAAATAGCGTAAACCATGTTCATACTGAATGATACTTGCACTATTTGCAGTAAATTGACTCTTATTTTTTAGAGTGATTAATATCTCACCTCTTCTTTGCTACCAGGAACATAAAGACATCAGAGGACGACGTACCTGTACCACCTCTTTTGAAGAGTGCTGCTCTTTGGGGTATGAAATTGTTCATTTTTTAACATTATTACATGATTTTTAGCTCTTCTATATCTATCCAGAAAACAGCAACCATTTATTTTTATTCAGTTATTAGGAAATTTACCTATGAATTAAGTTGAGGTAAAATTTGATTCCCTTGTTTGTCGATAGTCATAATATCATTAAAGAATAAATTGTATAACAATACGATGATTGATGACAGCTAAAAGTTTTTTTTCTTTTTGAAGTTATTGAAATTTGTCTTTTATAAACTATTATGTGTTTTTTATTATGAATGTCCAGAACTGATTTTATTGAACAGTAGTTATATTCTTTGAACAGCTAGTTTGTTATTTCTGTTTAGAAGCTTCTATTCTATTTAATCAAGACTGTGTAGTTCAATTAGAGTGGTGGTTGGTTGAAAATACTAGATTATTTCCTTTACAGTTGATTTATGACTTTTATTGTTTTCTGTATGTTGTTTAACCTCTTCCTTTTTTCCTTCTCTCTAATCACTCCGACGACCAATGTAGTACTAGCACTTCAGATTGAATGTGTGTCCGATGTCCAACACCGGCACTTTCGATTACATTTAATCACTTTTATTTTCTCAAATTATCACTGGTGTTTATGTGTTAGTGTTGTGTCCATATCACCGGTGTTTATGTGTTAGTGTTGTGTCCAGAATCCGCGTATGTGTCCGTGCTTCGTAGCACAAAACAAGGAAAATATGCTATCATATTGAAGCATATAAATCTATCTATACAACAGAAACACTAACAAGTTATGTGCAATATGGATCACCAAGATTTGTTATGATTGATCTGTCTGTTTTCTCTATCATTGCTATTTTTGACTTTTCAGCATTATTGATCTATAGACCAACTTGACATGTATTTTGTTCTGCATTTGACATGTTTCCCGAACATCCATGCAGGTGTGTTCCTTGGGGTATCTTCAAACACGCGATACCAGGTCATCAATGGACTGGAACGTTTGGTAGAAGCATCGCCAATGGCAAAGCAGGTTCCACCAGTTGCTCTGGCTTTCACAGTTGGTGTGCGTTTTGCAAACAATGTTTATGGTGGCATGCAGTTTGTTGACTGGGCTAGGTGGAGTGGAGTACAATAG

Protein sequence

>MS.gene89831.t1

MAGCSSNFGVARVVSVGKEAGLGKNVNQYSSFSSLSFRSAMLLNEAAFPAICVNKCGGGSYLSIQKKQTFLTMCMSQPPADSQPAVSTIELSEGGSDSVVGKEQKILDSESDSKSVGNDDNGVVFDGSGGNGSFGSGGAGDGGGGGGDDDDDKDEGEFGPMLKYDEVLRETEARGVTLPFDMLEAAKTVGIPKLLLLRYLDLEGSFWPLGFAMRSCSMLRNRMLADPAFLFKIGSEIVIDSCCATVAEYQKRGKDFWNEFELYVADLLVGTVVNVALVGMLAPYARIGKPSISKGFLGNMQKAYAALPSSVFEAERPGCRFSVQQRLGTYFFKGIMYAGVGFGCGIIGQGIANMIMTAKRNIKTSEDDVPVPPLLKSAALWGVFLGVSSNTRYQVINGLERLVEASPMAKQVPPVALAFTVGVRFANNVYGGMQFVDWARWSGVQ