Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89831.t1 | XP_013449008.1 | 96.2 | 448 | 14 | 1 | 1 | 445 | 1 | 448 | 1.10E-223 | 785.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89831.t1 | B9DFK5 | 64.7 | 447 | 141 | 5 | 1 | 445 | 1 | 432 | 3.0e-134 | 479.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89831.t1 | A0A072UB17 | 96.2 | 448 | 14 | 1 | 1 | 445 | 1 | 448 | 7.6e-224 | 785.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05093 | MS.gene89831 | 0.810211 | 1.29E-50 | -1.69E-46 |
MS.gene051063 | MS.gene89831 | 0.812766 | 3.59E-51 | -1.69E-46 |
MS.gene051746 | MS.gene89831 | 0.812652 | 3.81E-51 | -1.69E-46 |
MS.gene051903 | MS.gene89831 | 0.808937 | 2.42E-50 | -1.69E-46 |
MS.gene052309 | MS.gene89831 | -0.810098 | 1.36E-50 | -1.69E-46 |
MS.gene052358 | MS.gene89831 | -0.80281 | 4.70E-49 | -1.69E-46 |
MS.gene052818 | MS.gene89831 | -0.811542 | 6.65E-51 | -1.69E-46 |
MS.gene055174 | MS.gene89831 | 0.87786 | 4.48E-69 | -1.69E-46 |
MS.gene057057 | MS.gene89831 | 0.802728 | 4.89E-49 | -1.69E-46 |
MS.gene057234 | MS.gene89831 | 0.818337 | 2.07E-52 | -1.69E-46 |
MS.gene06001 | MS.gene89831 | 0.815635 | 8.35E-52 | -1.69E-46 |
MS.gene060165 | MS.gene89831 | 0.81242 | 4.28E-51 | -1.69E-46 |
MS.gene060619 | MS.gene89831 | 0.819699 | 1.01E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89831.t1 | MTR_7g064130 | 95.982 | 448 | 15 | 1 | 1 | 445 | 1 | 448 | 0.0 | 870 |
MS.gene89831.t1 | MTR_2g084605 | 74.476 | 286 | 73 | 0 | 160 | 445 | 107 | 392 | 3.36e-162 | 463 |
MS.gene89831.t1 | MTR_7g064190 | 96.875 | 64 | 2 | 0 | 382 | 445 | 16 | 79 | 1.69e-38 | 134 |
MS.gene89831.t1 | MTR_0013s0150 | 30.693 | 303 | 185 | 9 | 150 | 445 | 93 | 377 | 4.41e-35 | 134 |
MS.gene89831.t1 | MTR_4g077000 | 30.841 | 321 | 191 | 9 | 132 | 445 | 92 | 388 | 3.48e-33 | 129 |
MS.gene89831.t1 | MTR_3g033620 | 30.584 | 291 | 181 | 8 | 161 | 445 | 112 | 387 | 1.17e-29 | 119 |
MS.gene89831.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 96 | 307 | 3.02e-27 | 111 |
MS.gene89831.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 96 | 307 | 1.25e-26 | 110 |
MS.gene89831.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 114 | 325 | 1.61e-26 | 110 |
MS.gene89831.t1 | MTR_7g074070 | 34.061 | 229 | 131 | 8 | 220 | 445 | 107 | 318 | 5.19e-25 | 105 |
MS.gene89831.t1 | MTR_3g071970 | 26.882 | 279 | 194 | 5 | 174 | 445 | 441 | 716 | 1.93e-24 | 107 |
MS.gene89831.t1 | MTR_2g081000 | 30.137 | 219 | 137 | 5 | 222 | 438 | 241 | 445 | 2.34e-19 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89831.t1 | AT2G37860 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.05e-173 | 494 |
MS.gene89831.t1 | AT2G37860 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.05e-173 | 494 |
MS.gene89831.t1 | AT5G22790 | 74.324 | 296 | 75 | 1 | 151 | 445 | 138 | 433 | 5.38e-168 | 479 |
MS.gene89831.t1 | AT2G37860 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 4.07e-118 | 349 |
MS.gene89831.t1 | AT2G37860 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 4.07e-118 | 349 |
MS.gene89831.t1 | AT5G12470 | 29.568 | 301 | 193 | 7 | 151 | 445 | 96 | 383 | 4.15e-34 | 132 |
MS.gene89831.t1 | AT3G08640 | 34.008 | 247 | 141 | 8 | 203 | 445 | 94 | 322 | 9.96e-32 | 124 |
MS.gene89831.t1 | AT3G08630 | 34.061 | 229 | 133 | 6 | 220 | 445 | 106 | 319 | 6.12e-31 | 122 |
MS.gene89831.t1 | AT3G56140 | 31.667 | 240 | 143 | 6 | 219 | 445 | 258 | 489 | 2.86e-25 | 108 |
MS.gene89831.t1 | AT3G56140 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.54e-25 | 109 |
MS.gene89831.t1 | AT3G56140 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.54e-25 | 109 |
MS.gene89831.t1 | AT2G40400 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.93e-24 | 107 |
MS.gene89831.t1 | AT2G40400 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.93e-24 | 107 |
MS.gene89831.t1 | AT5G24690 | 30.415 | 217 | 139 | 3 | 222 | 438 | 240 | 444 | 9.88e-21 | 95.1 |
MS.gene89831.t1 | AT2G40400 | 29.237 | 236 | 144 | 7 | 174 | 395 | 424 | 650 | 1.90e-17 | 85.5 |
Find 117 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGCTTCTTCTTAGATATT+TGG | 0.155876 | 7.3:-41307100 | MS.gene89831:CDS |
GCGGGTTGTTCATCGAATTT+TGG | 0.160333 | 7.3:-41307675 | MS.gene89831:CDS |
GGGAAAGGAACAGAAAATTT+TGG | 0.206843 | 7.3:-41307379 | MS.gene89831:CDS |
TTTGAAGAGTGCTGCTCTTT+GGG | 0.218226 | 7.3:-41303930 | MS.gene89831:CDS |
TGGAAAACCATCAATATCTA+AGG | 0.254488 | 7.3:-41306534 | MS.gene89831:CDS |
AAAAGAGAGGCAAAGACTTT+TGG | 0.264746 | 7.3:-41306646 | MS.gene89831:CDS |
GGATTTGGATGTGGTATTAT+AGG | 0.277977 | 7.3:-41306069 | MS.gene89831:CDS |
GTCGGGAAAGAAGCTGGTTT+GGG | 0.334014 | 7.3:-41307633 | MS.gene89831:CDS |
TCTTCTTAGATATTTGGATT+TGG | 0.336682 | 7.3:-41307094 | MS.gene89831:CDS |
TCCATGCAGGTGTGTTCCTT+GGG | 0.357793 | 7.3:-41302997 | MS.gene89831:intron |
ATCCATGCAGGTGTGTTCCT+TGG | 0.370707 | 7.3:-41302998 | MS.gene89831:intron |
TTGGCACCTTATGCTCGAAT+TGG | 0.371610 | 7.3:-41306554 | MS.gene89831:CDS |
ATGTATGCAGGTGTTGGATT+TGG | 0.374444 | 7.3:-41306084 | MS.gene89831:CDS |
AGGAATCCCTTAGATATTGA+TGG | 0.391446 | 7.3:+41306527 | None:intergenic |
CACTTGTTCACACAAATTGC+TGG | 0.394745 | 7.3:+41307534 | None:intergenic |
TGTAAGTACGATAGAATTAT+CGG | 0.396315 | 7.3:-41307424 | MS.gene89831:CDS |
TATGTTGCAGATCTTCTTGT+TGG | 0.403747 | 7.3:-41306608 | MS.gene89831:CDS |
ATCTAAGAAGAAGCAACTTC+GGG | 0.404666 | 7.3:+41307106 | None:intergenic |
ATCATCATTTCCAACACTCT+TGG | 0.405442 | 7.3:+41307341 | None:intergenic |
TGTCGGGAAAGAAGCTGGTT+TGG | 0.407345 | 7.3:-41307634 | MS.gene89831:CDS |
GATAATGGTGTTGTGTTTGA+TGG | 0.408754 | 7.3:-41307321 | MS.gene89831:CDS |
AGCTTTGGAAGTGGCGGAGC+AGG | 0.413212 | 7.3:-41307282 | MS.gene89831:CDS |
GGAGATGGCGGTGGTGGCGG+TGG | 0.416567 | 7.3:-41307261 | MS.gene89831:CDS |
CTTATGCAGCTTTACCTAGC+AGG | 0.418534 | 7.3:-41306487 | MS.gene89831:intron |
TTATCATGTTTGCAATGCCT+TGG | 0.420614 | 7.3:+41306046 | None:intergenic |
GCAGGTTCCACCAGTTGCTC+TGG | 0.421142 | 7.3:-41302903 | MS.gene89831:CDS |
GGAGCAGGAGATGGCGGTGG+TGG | 0.435083 | 7.3:-41307267 | MS.gene89831:CDS |
GCAGGAGATGGCGGTGGTGG+CGG | 0.436118 | 7.3:-41307264 | MS.gene89831:CDS |
GACGGTTGTTAATGTTGCTT+TGG | 0.439449 | 7.3:-41306585 | MS.gene89831:CDS |
GTGGCATGCAGTTTGTTGAC+TGG | 0.441374 | 7.3:-41302841 | MS.gene89831:CDS |
ACTGTGAAAGCCAGAGCAAC+TGG | 0.449407 | 7.3:+41302893 | None:intergenic |
TGTTGCTTTGGTTGGAATGT+TGG | 0.454554 | 7.3:-41306573 | MS.gene89831:CDS |
TCTTAGATATTTGGATTTGG+AGG | 0.455983 | 7.3:-41307091 | MS.gene89831:intron |
GTTGTTAATGTTGCTTTGGT+TGG | 0.456847 | 7.3:-41306581 | MS.gene89831:CDS |
AGTGGTGGTAATGGAAGCTT+TGG | 0.457520 | 7.3:-41307297 | MS.gene89831:CDS |
AGCATCGCCAATGGCAAAGC+AGG | 0.473131 | 7.3:-41302921 | MS.gene89831:CDS |
GTTGCTCTGGCTTTCACAGT+TGG | 0.475783 | 7.3:-41302890 | MS.gene89831:CDS |
GCAGGTGTTGGATTTGGATG+TGG | 0.479236 | 7.3:-41306078 | MS.gene89831:CDS |
TATCTAAGAAGAAGCAACTT+CGG | 0.479521 | 7.3:+41307105 | None:intergenic |
TCAATATCTAAGGGATTCCT+TGG | 0.479546 | 7.3:-41306524 | MS.gene89831:CDS |
TGCAGTTTGTTGACTGGGCT+AGG | 0.482177 | 7.3:-41302835 | MS.gene89831:CDS |
CATCAATGGACTGGAACGTT+TGG | 0.482709 | 7.3:-41302948 | MS.gene89831:CDS |
AAGTGATAGTGTTGTGGGAA+AGG | 0.483899 | 7.3:-41307394 | MS.gene89831:CDS |
GGTGGAACCTGCTTTGCCAT+TGG | 0.486100 | 7.3:+41302914 | None:intergenic |
GGTGTTGTGTTTGATGGTAG+TGG | 0.488998 | 7.3:-41307315 | MS.gene89831:CDS |
ACTTGGAACATACTTCTTCA+AGG | 0.489407 | 7.3:-41306200 | MS.gene89831:intron |
CTCTTCAAAAGAGGTGGTAC+AGG | 0.498159 | 7.3:+41303944 | None:intergenic |
GCAGCCTCCAACATATCAAA+AGG | 0.499434 | 7.3:+41307144 | None:intergenic |
TATGCTTCGCAATCGAATGC+TGG | 0.506531 | 7.3:-41306916 | MS.gene89831:CDS |
ACGCGATACCAGGTCATCAA+TGG | 0.507241 | 7.3:-41302962 | MS.gene89831:CDS |
GTAAGTGTCGGGAAAGAAGC+TGG | 0.512196 | 7.3:-41307639 | MS.gene89831:CDS |
GGTATAATGTATGCAGGTGT+TGG | 0.513052 | 7.3:-41306090 | MS.gene89831:CDS |
TTGAAGAGTGCTGCTCTTTG+GGG | 0.513979 | 7.3:-41303929 | MS.gene89831:intron |
TACGATAGAATTATCGGAAG+GGG | 0.518047 | 7.3:-41307418 | MS.gene89831:CDS |
TGGCATGCAGTTTGTTGACT+GGG | 0.519280 | 7.3:-41302840 | MS.gene89831:CDS |
GGAAGTGGCGGAGCAGGAGA+TGG | 0.519395 | 7.3:-41307276 | MS.gene89831:CDS |
ATGTTGCAGATCTTCTTGTT+GGG | 0.519882 | 7.3:-41306607 | MS.gene89831:CDS |
TTTGATGGTAGTGGTGGTAA+TGG | 0.523492 | 7.3:-41307306 | MS.gene89831:CDS |
TGGCTCGAGTTGTAAGTGTC+GGG | 0.526472 | 7.3:-41307650 | MS.gene89831:CDS |
TGTGTGAACAAGTGCGGTGG+TGG | 0.526944 | 7.3:-41307525 | MS.gene89831:CDS |
ATCTTCAAACACGCGATACC+AGG | 0.527301 | 7.3:-41302972 | MS.gene89831:CDS |
GATCTCATGGCAAATCCTAA+AGG | 0.535500 | 7.3:+41306945 | None:intergenic |
GTGGCTCGAGTTGTAAGTGT+CGG | 0.536736 | 7.3:-41307651 | MS.gene89831:CDS |
TTCCAGGGTATAATGTATGC+AGG | 0.540927 | 7.3:-41306096 | MS.gene89831:intron |
CCTCCAACATATCAAAAGGA+AGG | 0.542894 | 7.3:+41307148 | None:intergenic |
AGTGTTGGAAATGATGATAA+TGG | 0.543927 | 7.3:-41307336 | MS.gene89831:CDS |
GTTGGAGGCTGCTAAGACTG+TGG | 0.546763 | 7.3:-41307133 | MS.gene89831:CDS |
AATTCTATCGTACTTACAGC+AGG | 0.548443 | 7.3:+41307429 | None:intergenic |
GGCGGAGCAGGAGATGGCGG+TGG | 0.549808 | 7.3:-41307270 | MS.gene89831:CDS |
GGATGTGGTATTATAGGCCA+AGG | 0.552476 | 7.3:-41306063 | MS.gene89831:CDS |
CATGTGCATGTCGCAGCCGC+CGG | 0.556713 | 7.3:-41307463 | MS.gene89831:CDS |
TGCAGATCTTCTTGTTGGGA+CGG | 0.558342 | 7.3:-41306603 | MS.gene89831:CDS |
GTATTTGAAGCTGAAAGGCC+AGG | 0.561879 | 7.3:-41306247 | MS.gene89831:CDS |
GTTGACTGGGCTAGGTGGAG+TGG | 0.562706 | 7.3:-41302827 | MS.gene89831:CDS |
ACAGCAGGCTGTGAATCAGC+CGG | 0.563170 | 7.3:+41307444 | None:intergenic |
GGAAAACCATCAATATCTAA+GGG | 0.572801 | 7.3:-41306533 | MS.gene89831:CDS |
ATACCAGGTCATCAATGGAC+TGG | 0.578972 | 7.3:-41302957 | MS.gene89831:CDS |
CGGCGGCTGCGACATGCACA+TGG | 0.579440 | 7.3:+41307464 | None:intergenic |
AAGCATAGAACATGATCTCA+TGG | 0.582119 | 7.3:+41306932 | None:intergenic |
TGCACAGAAAATCTACATCC+TGG | 0.582715 | 7.3:+41306229 | None:intergenic |
GCAGTGTATTTGAAGCTGAA+AGG | 0.583183 | 7.3:-41306252 | MS.gene89831:intron |
TTTGCAAACAATGTTTATGG+TGG | 0.584674 | 7.3:-41302860 | MS.gene89831:CDS |
AGTGGCGGAGCAGGAGATGG+CGG | 0.585593 | 7.3:-41307273 | MS.gene89831:CDS |
GGTAATGGAAGCTTTGGAAG+TGG | 0.586739 | 7.3:-41307291 | MS.gene89831:CDS |
GAGTCGGATTCCAAGAGTGT+TGG | 0.595342 | 7.3:-41307351 | MS.gene89831:CDS |
AGAGCAGCACTCTTCAAAAG+AGG | 0.596155 | 7.3:+41303935 | None:intergenic |
CCATGCAGGTGTGTTCCTTG+GGG | 0.596783 | 7.3:-41302996 | MS.gene89831:intron |
GTTCCAGTCCATTGATGACC+TGG | 0.603834 | 7.3:+41302954 | None:intergenic |
CTCCAACATATCAAAAGGAA+GGG | 0.605068 | 7.3:+41307149 | None:intergenic |
GTTGCTGAATATCAAAAGAG+AGG | 0.607008 | 7.3:-41306659 | MS.gene89831:CDS |
AGTACGATAGAATTATCGGA+AGG | 0.623310 | 7.3:-41307420 | MS.gene89831:CDS |
ATGACGAGTAGTAACCTGCT+AGG | 0.624592 | 7.3:+41306473 | None:intergenic |
TTGGAGGCTGCTAAGACTGT+GGG | 0.625642 | 7.3:-41307132 | MS.gene89831:CDS |
AAGCTTTCTGCATATTACCA+AGG | 0.627406 | 7.3:+41306507 | None:intergenic |
GATGATGACGACAAAGATGA+GGG | 0.627798 | 7.3:-41307234 | MS.gene89831:CDS |
GAGTGCGATGTTGTTGAATG+AGG | 0.634613 | 7.3:-41307565 | MS.gene89831:CDS |
GTTGTGTTTGATGGTAGTGG+TGG | 0.634972 | 7.3:-41307312 | MS.gene89831:CDS |
CGAGGTATTGAGAGAGACAG+AGG | 0.635942 | 7.3:-41307184 | MS.gene89831:CDS |
TTTGGTAGAAGCATCGCCAA+TGG | 0.639236 | 7.3:-41302930 | MS.gene89831:CDS |
AATGGAAGCTTTGGAAGTGG+CGG | 0.641690 | 7.3:-41307288 | MS.gene89831:CDS |
GTACGATAGAATTATCGGAA+GGG | 0.641710 | 7.3:-41307419 | MS.gene89831:CDS |
GCAGGCTGTGAATCAGCCGG+CGG | 0.654169 | 7.3:+41307447 | None:intergenic |
TGATGATGACGACAAAGATG+AGG | 0.654615 | 7.3:-41307235 | MS.gene89831:CDS |
CAGGAACATAAAGACATCAG+AGG | 0.657150 | 7.3:-41303975 | MS.gene89831:CDS |
GTGAAAGCCAGAGCAACTGG+TGG | 0.659608 | 7.3:+41302896 | None:intergenic |
ACGATAGAATTATCGGAAGG+GGG | 0.659659 | 7.3:-41307417 | MS.gene89831:CDS |
GCAGCACTCTTCAAAAGAGG+TGG | 0.662234 | 7.3:+41303938 | None:intergenic |
TCGGGAAAGAAGCTGGTTTG+GGG | 0.662291 | 7.3:-41307632 | MS.gene89831:CDS |
TGATGACGACAAAGATGAGG+GGG | 0.669601 | 7.3:-41307232 | MS.gene89831:CDS |
ATGATGACGACAAAGATGAG+GGG | 0.689880 | 7.3:-41307233 | MS.gene89831:CDS |
AGTTTGTTGACTGGGCTAGG+TGG | 0.701181 | 7.3:-41302832 | MS.gene89831:CDS |
GCGTGTTTGAAGATACCCCA+AGG | 0.708255 | 7.3:+41302981 | None:intergenic |
GCAATTTGTGTGAACAAGTG+CGG | 0.709591 | 7.3:-41307531 | MS.gene89831:CDS |
ACATGATAATGACTGCAAAG+CGG | 0.721151 | 7.3:-41306032 | MS.gene89831:intron |
TTGAGAGAGACAGAGGCACG+CGG | 0.729175 | 7.3:-41307177 | MS.gene89831:CDS |
GCCAATGCTAAAATACGACG+AGG | 0.732644 | 7.3:-41307202 | MS.gene89831:CDS |
ATTTGTGTGAACAAGTGCGG+TGG | 0.742292 | 7.3:-41307528 | MS.gene89831:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAACTGAATAAAAATAAA+TGG | + | chr7.3:41306663-41306682 | None:intergenic | 10.0% |
!! | TATATATATATATATATCAG+CGG | + | chr7.3:41304781-41304800 | None:intergenic | 10.0% |
!! | TTAATTTACATTAAAATCAA+TGG | - | chr7.3:41305514-41305533 | MS.gene89831:intron | 10.0% |
!! | TTAATTTACATTAAAATCAA+TGG | + | chr7.3:41305533-41305514 | None:intergenic | 10.0% |
!!! | AAGAATAAAACTTTTTTTTA+AGG | + | chr7.3:41305258-41305277 | None:intergenic | 10.0% |
!!! | CAATTAAATTCATTTTTTAT+GGG | - | chr7.3:41305209-41305228 | MS.gene89831:intron | 10.0% |
!!! | TCAATTAAATTCATTTTTTA+TGG | - | chr7.3:41305208-41305227 | MS.gene89831:intron | 10.0% |
!!! | TTGATTTTAATGTAAATTAA+TGG | - | chr7.3:41304879-41304898 | MS.gene89831:intron | 10.0% |
!!! | TTGATTTTAATGTAAATTAA+TGG | + | chr7.3:41304898-41304879 | None:intergenic | 10.0% |
!!! | TTTATTTTTATTCAGTTATT+AGG | - | chr7.3:41306663-41306682 | MS.gene89831:CDS | 10.0% |
!! | ATATATATATATATAGAGGA+GGG | - | chr7.3:41304806-41304825 | MS.gene89831:intron | 15.0% |
!! | ATATATATATATATATGAGG+AGG | + | chr7.3:41305588-41305607 | None:intergenic | 15.0% |
!! | TAATCTTCTATTGAATAAAA+TGG | - | chr7.3:41305340-41305359 | MS.gene89831:intron | 15.0% |
!! | TATATATATATATATAGAGG+AGG | - | chr7.3:41304805-41304824 | MS.gene89831:intron | 15.0% |
!! | TATATATATATATATGAGGA+GGG | + | chr7.3:41305587-41305606 | None:intergenic | 15.0% |
!! | TGCTGTTAAATTAAATAAAA+AGG | + | chr7.3:41305377-41305396 | None:intergenic | 15.0% |
!! | TTTATTCAATAGAAGATTAA+AGG | + | chr7.3:41305339-41305358 | None:intergenic | 15.0% |
!!! | TATGTTTGTATAATTTTCAA+TGG | - | chr7.3:41303672-41303691 | MS.gene89831:intron | 15.0% |
!! | AATCTTGATTCTCAAATTAA+TGG | - | chr7.3:41304974-41304993 | MS.gene89831:intron | 20.0% |
!! | CTATACAAAAACAATAAACA+AGG | - | chr7.3:41305741-41305760 | MS.gene89831:intron | 20.0% |
!! | TTACATTAAAATCAATGGTT+AGG | + | chr7.3:41304874-41304893 | None:intergenic | 20.0% |
!!! | TTATTTTCTCAAATTATCAC+TGG | - | chr7.3:41307172-41307191 | MS.gene89831:CDS | 20.0% |
!!! | TTTAGGTTATCTATATGAAT+AGG | - | chr7.3:41305128-41305147 | MS.gene89831:intron | 20.0% |
! | AAATATTGACACCAAAAACA+AGG | + | chr7.3:41304061-41304080 | None:intergenic | 25.0% |
! | AAGTCATAAATCAACTGTAA+AGG | + | chr7.3:41307011-41307030 | None:intergenic | 25.0% |
! | AATATGCAGAAAAATGATCA+CGG | + | chr7.3:41305103-41305122 | None:intergenic | 25.0% |
! | AATTGACACTTATATCAATC+AGG | + | chr7.3:41305698-41305717 | None:intergenic | 25.0% |
! | AGATCAATCATAACAAATCT+TGG | + | chr7.3:41307376-41307395 | None:intergenic | 25.0% |
! | AGTAATAAAACCTTATGCTA+GGG | - | chr7.3:41305467-41305486 | MS.gene89831:intron | 25.0% |
! | CGTGAAAACAATCTAAATAA+TGG | + | chr7.3:41305420-41305439 | None:intergenic | 25.0% |
! | TAAAATCAATGGTTAGGATT+TGG | + | chr7.3:41304868-41304887 | None:intergenic | 25.0% |
! | TAAACAAGGAATGTTTGAAT+TGG | - | chr7.3:41305755-41305774 | MS.gene89831:intron | 25.0% |
! | TAACTCTTTATACTTACTCT+TGG | - | chr7.3:41305550-41305569 | MS.gene89831:intron | 25.0% |
! | TAACTCTTTATACTTACTCT+TGG | + | chr7.3:41305569-41305550 | None:intergenic | 25.0% |
! | TCTTCTTAGATATTTGGATT+TGG | - | chr7.3:41303401-41303420 | MS.gene89831:intron | 25.0% |
! | TGACTTCATTATATGAACTA+AGG | - | chr7.3:41306029-41306048 | MS.gene89831:intron | 25.0% |
! | TGAGTGCAAGATTATTTATT+TGG | - | chr7.3:41304321-41304340 | MS.gene89831:intron | 25.0% |
! | TGTAAGTACGATAGAATTAT+CGG | - | chr7.3:41303071-41303090 | MS.gene89831:intron | 25.0% |
! | TTACATTAAAATCAATGGCT+AGG | - | chr7.3:41305519-41305538 | MS.gene89831:intron | 25.0% |
! | TTATCTATATGAATAGGCAA+AGG | - | chr7.3:41305134-41305153 | MS.gene89831:intron | 25.0% |
! | TTATGATATTCTCAATTGCA+GGG | - | chr7.3:41303517-41303536 | MS.gene89831:intron | 25.0% |
! | TTTACCTCAACTTAATTCAT+AGG | + | chr7.3:41306696-41306715 | None:intergenic | 25.0% |
! | TTTATGATATTCTCAATTGC+AGG | - | chr7.3:41303516-41303535 | MS.gene89831:intron | 25.0% |
!! | ATAGAGCTTTATATGAAAAG+TGG | + | chr7.3:41305725-41305744 | None:intergenic | 25.0% |
!! | TAGAGCTTTATATGAAAAGT+GGG | + | chr7.3:41305724-41305743 | None:intergenic | 25.0% |
!! | TCATTCATTGTTTCTTATTG+AGG | + | chr7.3:41305034-41305053 | None:intergenic | 25.0% |
!! | TTTACCTATGAATTAAGTTG+AGG | - | chr7.3:41306689-41306708 | MS.gene89831:CDS | 25.0% |
!! | TTTCTGCATATTTCGATTTT+AGG | - | chr7.3:41305111-41305130 | MS.gene89831:intron | 25.0% |
!!! | AAACATGTCAGTTTTTTGTT+TGG | - | chr7.3:41306121-41306140 | MS.gene89831:intron | 25.0% |
!!! | TATTTACTGAGAAGTATTCA+AGG | - | chr7.3:41305657-41305676 | MS.gene89831:intron | 25.0% |
!!! | TTTCTGTGTAGTTGTTATTT+AGG | + | chr7.3:41304956-41304975 | None:intergenic | 25.0% |
AAACAAGATGATCATTACCT+AGG | - | chr7.3:41303478-41303497 | MS.gene89831:intron | 30.0% | |
AATGGACATTTCTATTTCCA+GGG | - | chr7.3:41304384-41304403 | MS.gene89831:intron | 30.0% | |
AGTATCATTCAGTATGAACA+TGG | + | chr7.3:41306433-41306452 | None:intergenic | 30.0% | |
ATTATATTAGAAGATCCGCA+TGG | + | chr7.3:41304751-41304770 | None:intergenic | 30.0% | |
ATTATGACTATCGACAAACA+AGG | + | chr7.3:41306728-41306747 | None:intergenic | 30.0% | |
CAAATTAATGGCTTACTCTT+TGG | - | chr7.3:41304986-41305005 | MS.gene89831:intron | 30.0% | |
CAATGAGTGTTTCATTTGAA+TGG | - | chr7.3:41304366-41304385 | MS.gene89831:intron | 30.0% | |
CATATAATGAAGTCACACTT+TGG | + | chr7.3:41306024-41306043 | None:intergenic | 30.0% | |
CTAACAAGTTATGTGCAATA+TGG | - | chr7.3:41307346-41307365 | MS.gene89831:CDS | 30.0% | |
CTGAAGACAAAAAAGCAATT+AGG | + | chr7.3:41304179-41304198 | None:intergenic | 30.0% | |
CTGATTGTCAGATATATGAT+TGG | + | chr7.3:41304581-41304600 | None:intergenic | 30.0% | |
CTGTTCAATAAAATCAGTTC+TGG | + | chr7.3:41306872-41306891 | None:intergenic | 30.0% | |
CTTCTATTGAATAAAATGGC+TGG | - | chr7.3:41305344-41305363 | MS.gene89831:intron | 30.0% | |
GAAAACTATATACTATTCGC+TGG | - | chr7.3:41305064-41305083 | MS.gene89831:intron | 30.0% | |
GAACAAAATACATGTCAAGT+TGG | + | chr7.3:41307454-41307473 | None:intergenic | 30.0% | |
GAGTAATAAAACCTTATGCT+AGG | - | chr7.3:41305466-41305485 | MS.gene89831:intron | 30.0% | |
GGAAAACCATCAATATCTAA+GGG | - | chr7.3:41303962-41303981 | MS.gene89831:CDS | 30.0% | |
GTCAGATATATGATTGGAAA+GGG | + | chr7.3:41304575-41304594 | None:intergenic | 30.0% | |
GTTGCTTCTTCTTAGATATT+TGG | - | chr7.3:41303395-41303414 | MS.gene89831:intron | 30.0% | |
TAAAATCAATGGCTAGGATT+TGG | - | chr7.3:41305525-41305544 | MS.gene89831:intron | 30.0% | |
TACTCGTCATGACATTAAAA+GGG | - | chr7.3:41304035-41304054 | MS.gene89831:intron | 30.0% | |
TATCTAAGAAGAAGCAACTT+CGG | + | chr7.3:41303393-41303412 | None:intergenic | 30.0% | |
TCTAATACTCACTCTCTTAT+TGG | - | chr7.3:41304618-41304637 | MS.gene89831:intron | 30.0% | |
TCTTAGATATTTGGATTTGG+AGG | - | chr7.3:41303404-41303423 | MS.gene89831:intron | 30.0% | |
TGATTAGAGAGAAGGAAAAA+AGG | + | chr7.3:41307065-41307084 | None:intergenic | 30.0% | |
TGCAAACTATGTAATGACAA+CGG | + | chr7.3:41304505-41304524 | None:intergenic | 30.0% | |
TGGAAAACCATCAATATCTA+AGG | - | chr7.3:41303961-41303980 | MS.gene89831:CDS | 30.0% | |
TGTCAGATATATGATTGGAA+AGG | + | chr7.3:41304576-41304595 | None:intergenic | 30.0% | |
TTATGACTATCGACAAACAA+GGG | + | chr7.3:41306727-41306746 | None:intergenic | 30.0% | |
TTTGCAAACAATGTTTATGG+TGG | - | chr7.3:41307635-41307654 | MS.gene89831:CDS | 30.0% | |
! | AGTGTTGGAAATGATGATAA+TGG | - | chr7.3:41303159-41303178 | MS.gene89831:intron | 30.0% |
! | CCAGCATTTCTTTTCAAAAT+TGG | - | chr7.3:41303607-41303626 | MS.gene89831:intron | 30.0% |
! | CGTTTTGCAAACAATGTTTA+TGG | - | chr7.3:41307632-41307651 | MS.gene89831:CDS | 30.0% |
! | GAAAATTTTGGATAGTGAGT+CGG | - | chr7.3:41303128-41303147 | MS.gene89831:intron | 30.0% |
! | GAATTTTCCAATAGCATACA+TGG | + | chr7.3:41303445-41303464 | None:intergenic | 30.0% |
! | GCTTTTTGCTTGACATAAAT+AGG | - | chr7.3:41306051-41306070 | MS.gene89831:CDS | 30.0% |
! | TCTAAAATGACATGAAAGTC+AGG | - | chr7.3:41304143-41304162 | MS.gene89831:intron | 30.0% |
! | TTAAATGTAATCGAAAGTGC+CGG | + | chr7.3:41307146-41307165 | None:intergenic | 30.0% |
!! | CCAATTTTGAAAAGAAATGC+TGG | + | chr7.3:41303610-41303629 | None:intergenic | 30.0% |
!! | GTAGTTGTTATTTAGGAAGA+AGG | + | chr7.3:41304949-41304968 | None:intergenic | 30.0% |
!! | GTTTTAGTAGTTTGAGTTTC+AGG | - | chr7.3:41302908-41302927 | MS.gene89831:CDS | 30.0% |
!!! | AATAAATGGTTGCTGTTTTC+TGG | + | chr7.3:41306649-41306668 | None:intergenic | 30.0% |
!!! | CAGTTTTTTGTTTGGAAACT+CGG | - | chr7.3:41306129-41306148 | MS.gene89831:intron | 30.0% |
!!! | GACTTTCATGTCATTTTAGA+TGG | + | chr7.3:41304143-41304162 | None:intergenic | 30.0% |
AACAACAACGTTAAACTCCT+AGG | + | chr7.3:41303498-41303517 | None:intergenic | 35.0% | |
AAGCATAGAACATGATCTCA+TGG | + | chr7.3:41303566-41303585 | None:intergenic | 35.0% | |
AAGCTTTCTGCATATTACCA+AGG | + | chr7.3:41303991-41304010 | None:intergenic | 35.0% | |
AATTCTATCGTACTTACAGC+AGG | + | chr7.3:41303069-41303088 | None:intergenic | 35.0% | |
ACTGTGTAGTTCAATTAGAG+TGG | - | chr7.3:41306958-41306977 | MS.gene89831:CDS | 35.0% | |
ACTTGGAACATACTTCTTCA+AGG | - | chr7.3:41304295-41304314 | MS.gene89831:intron | 35.0% | |
AGGAATCCCTTAGATATTGA+TGG | + | chr7.3:41303971-41303990 | None:intergenic | 35.0% | |
AGTACGATAGAATTATCGGA+AGG | - | chr7.3:41303075-41303094 | MS.gene89831:intron | 35.0% | |
ATACTTACTCTTGGAGTCAA+TGG | - | chr7.3:41305559-41305578 | MS.gene89831:intron | 35.0% | |
ATACTTACTCTTGGAGTCAA+TGG | + | chr7.3:41305578-41305559 | None:intergenic | 35.0% | |
ATCATCATTTCCAACACTCT+TGG | + | chr7.3:41303157-41303176 | None:intergenic | 35.0% | |
ATCTAAGAAGAAGCAACTTC+GGG | + | chr7.3:41303392-41303411 | None:intergenic | 35.0% | |
ATCTGACAATCAGAAATGCT+AGG | - | chr7.3:41304588-41304607 | MS.gene89831:intron | 35.0% | |
ATGTTGCAGATCTTCTTGTT+GGG | - | chr7.3:41303888-41303907 | MS.gene89831:intron | 35.0% | |
CAACACTAACACATAAACAC+CGG | + | chr7.3:41307194-41307213 | None:intergenic | 35.0% | |
CACTAGTAATGACTAGCATA+GGG | - | chr7.3:41304913-41304932 | MS.gene89831:intron | 35.0% | |
CGGATTACTTAAGATAGAGA+AGG | + | chr7.3:41303769-41303788 | None:intergenic | 35.0% | |
CTACTCGTCATGACATTAAA+AGG | - | chr7.3:41304034-41304053 | MS.gene89831:intron | 35.0% | |
CTCCAACATATCAAAAGGAA+GGG | + | chr7.3:41303349-41303368 | None:intergenic | 35.0% | |
CTGCGTATCATGAGTTAAAT+CGG | + | chr7.3:41303789-41303808 | None:intergenic | 35.0% | |
GAATGGACATTTCTATTTCC+AGG | - | chr7.3:41304383-41304402 | MS.gene89831:intron | 35.0% | |
GACTATTTGAGCTTATCTAC+CGG | - | chr7.3:41305777-41305796 | MS.gene89831:intron | 35.0% | |
GCTTGACATAAATAGGTTCT+AGG | - | chr7.3:41306058-41306077 | MS.gene89831:CDS | 35.0% | |
GGATTTGGATGTGGTATTAT+AGG | - | chr7.3:41304426-41304445 | MS.gene89831:intron | 35.0% | |
GTACGATAGAATTATCGGAA+GGG | - | chr7.3:41303076-41303095 | MS.gene89831:intron | 35.0% | |
GTGACAACAATTCTTGTGTT+GGG | + | chr7.3:41306253-41306272 | None:intergenic | 35.0% | |
GTTGCTGAATATCAAAAGAG+AGG | - | chr7.3:41303836-41303855 | MS.gene89831:intron | 35.0% | |
TACGATAGAATTATCGGAAG+GGG | - | chr7.3:41303077-41303096 | MS.gene89831:intron | 35.0% | |
TATGTTGCAGATCTTCTTGT+TGG | - | chr7.3:41303887-41303906 | MS.gene89831:intron | 35.0% | |
TCAATATCTAAGGGATTCCT+TGG | - | chr7.3:41303971-41303990 | MS.gene89831:CDS | 35.0% | |
TCAATGTGTGTTGAACAGTT+TGG | - | chr7.3:41304646-41304665 | MS.gene89831:intron | 35.0% | |
TCACTAGTAATGACTAGCAT+AGG | - | chr7.3:41304912-41304931 | MS.gene89831:intron | 35.0% | |
TTATCATGTTTGCAATGCCT+TGG | + | chr7.3:41304452-41304471 | None:intergenic | 35.0% | |
! | AAAAGAGAGGCAAAGACTTT+TGG | - | chr7.3:41303849-41303868 | MS.gene89831:intron | 35.0% |
! | ACATGATAATGACTGCAAAG+CGG | - | chr7.3:41304463-41304482 | MS.gene89831:intron | 35.0% |
! | ACTTTGCTATGGCTTCAATT+GGG | + | chr7.3:41306216-41306235 | None:intergenic | 35.0% |
! | AGAGCACTTAGTCAAAGAAT+TGG | + | chr7.3:41303722-41303741 | None:intergenic | 35.0% |
! | CATATTTTCGTAAGCTCTCT+TGG | - | chr7.3:41305877-41305896 | MS.gene89831:intron | 35.0% |
! | CTTTTGATATTCAGCAACAG+TGG | + | chr7.3:41303834-41303853 | None:intergenic | 35.0% |
! | GGGAAAGGAACAGAAAATTT+TGG | - | chr7.3:41303116-41303135 | MS.gene89831:intron | 35.0% |
! | TACCCTTCCTTTTGATATGT+TGG | - | chr7.3:41303344-41303363 | MS.gene89831:intron | 35.0% |
! | TCTAGGAGCAGATTTTAAAC+AGG | - | chr7.3:41306075-41306094 | MS.gene89831:CDS | 35.0% |
!! | GATAATGGTGTTGTGTTTGA+TGG | - | chr7.3:41303174-41303193 | MS.gene89831:intron | 35.0% |
!! | GTTGTTAATGTTGCTTTGGT+TGG | - | chr7.3:41303914-41303933 | MS.gene89831:intron | 35.0% |
!! | TCTTTTCAAAATTGGCTCAG+AGG | - | chr7.3:41303615-41303634 | MS.gene89831:intron | 35.0% |
!!! | CATTAAAAGGGCCTTGTTTT+TGG | - | chr7.3:41304047-41304066 | MS.gene89831:intron | 35.0% |
AACCTTATGCTAGGGATTAG+TGG | - | chr7.3:41305475-41305494 | MS.gene89831:intron | 40.0% | |
AAGCACTTGTGAGACTCTTT+GGG | - | chr7.3:41305803-41305822 | MS.gene89831:intron | 40.0% | |
ACAAAGATGAGGGGGAATTT+GGG | - | chr7.3:41303271-41303290 | MS.gene89831:intron | 40.0% | |
ACAAGAATTGTTGTCACCTG+GGG | - | chr7.3:41306256-41306275 | MS.gene89831:intron | 40.0% | |
ACACAAGAATTGTTGTCACC+TGG | - | chr7.3:41306254-41306273 | MS.gene89831:intron | 40.0% | |
ACACATAAACACCGGTGATA+TGG | + | chr7.3:41307220-41307239 | None:intergenic | 40.0% | |
ACGATAGAATTATCGGAAGG+GGG | - | chr7.3:41303078-41303097 | MS.gene89831:intron | 40.0% | |
AGTTCAATTAGAGTGGTGGT+TGG | - | chr7.3:41306965-41306984 | MS.gene89831:intron | 40.0% | |
ATAATGACTGCAAAGCGGTA+TGG | - | chr7.3:41304468-41304487 | MS.gene89831:intron | 40.0% | |
CACAAGAATTGTTGTCACCT+GGG | - | chr7.3:41306255-41306274 | MS.gene89831:intron | 40.0% | |
CACTTGTTCACACAAATTGC+TGG | + | chr7.3:41302964-41302983 | None:intergenic | 40.0% | |
CAGGAACATAAAGACATCAG+AGG | - | chr7.3:41306520-41306539 | MS.gene89831:CDS | 40.0% | |
CCAATAGGATTAAACCCATG+TGG | + | chr7.3:41304682-41304701 | None:intergenic | 40.0% | |
CCACATGGGTTTAATCCTAT+TGG | - | chr7.3:41304679-41304698 | MS.gene89831:intron | 40.0% | |
CCTCCAACATATCAAAAGGA+AGG | + | chr7.3:41303350-41303369 | None:intergenic | 40.0% | |
CTCTGATGTCTTTATGTTCC+TGG | + | chr7.3:41306522-41306541 | None:intergenic | 40.0% | |
GAGAGAAGGAAAAAAGGAAG+AGG | + | chr7.3:41307059-41307078 | None:intergenic | 40.0% | |
GAGATGTCCATGTATGCTAT+TGG | - | chr7.3:41303435-41303454 | MS.gene89831:intron | 40.0% | |
GATCTCATGGCAAATCCTAA+AGG | + | chr7.3:41303553-41303572 | None:intergenic | 40.0% | |
GCAATTTGTGTGAACAAGTG+CGG | - | chr7.3:41302964-41302983 | MS.gene89831:CDS | 40.0% | |
GGTATAATGTATGCAGGTGT+TGG | - | chr7.3:41304405-41304424 | MS.gene89831:intron | 40.0% | |
GGTGACAACAATTCTTGTGT+TGG | + | chr7.3:41306254-41306273 | None:intergenic | 40.0% | |
GTGTAGTTCAATTAGAGTGG+TGG | - | chr7.3:41306961-41306980 | MS.gene89831:intron | 40.0% | |
GTTTAATCCTATTGGAGAGC+AGG | - | chr7.3:41304687-41304706 | MS.gene89831:intron | 40.0% | |
TAAGCACTTGTGAGACTCTT+TGG | - | chr7.3:41305802-41305821 | MS.gene89831:intron | 40.0% | |
TAGTGTTGTGTCCATATCAC+CGG | - | chr7.3:41307206-41307225 | MS.gene89831:CDS | 40.0% | |
TGCACAGAAAATCTACATCC+TGG | + | chr7.3:41304269-41304288 | None:intergenic | 40.0% | |
TTCCAGGGTATAATGTATGC+AGG | - | chr7.3:41304399-41304418 | MS.gene89831:intron | 40.0% | |
TTGGAAATGAGTCTCCACAT+GGG | - | chr7.3:41304665-41304684 | MS.gene89831:intron | 40.0% | |
TTGGTCAACGCAATTATGAG+AGG | - | chr7.3:41304340-41304359 | MS.gene89831:intron | 40.0% | |
TTGTTTGGAAACTCGGTATC+TGG | - | chr7.3:41306136-41306155 | MS.gene89831:intron | 40.0% | |
TTTAACACCTGCTCTCCAAT+AGG | + | chr7.3:41304697-41304716 | None:intergenic | 40.0% | |
TTTGGAAATGAGTCTCCACA+TGG | - | chr7.3:41304664-41304683 | MS.gene89831:intron | 40.0% | |
! | AAGTGATAGTGTTGTGGGAA+AGG | - | chr7.3:41303101-41303120 | MS.gene89831:intron | 40.0% |
! | ATGATGACGACAAAGATGAG+GGG | - | chr7.3:41303262-41303281 | MS.gene89831:intron | 40.0% |
! | CCTTCCTTTTGATATGTTGG+AGG | - | chr7.3:41303347-41303366 | MS.gene89831:intron | 40.0% |
! | CGGGTTGTTCATCGAATTTT+GGG | - | chr7.3:41302821-41302840 | MS.gene89831:CDS | 40.0% |
! | CTCAATTGCAGGGATCTTTT+TGG | - | chr7.3:41303527-41303546 | MS.gene89831:intron | 40.0% |
! | CTGAAGTGCTAGTACTACAT+TGG | + | chr7.3:41307097-41307116 | None:intergenic | 40.0% |
! | GAAATTTTTAACAACCCCCC+AGG | + | chr7.3:41306376-41306395 | None:intergenic | 40.0% |
! | GACGGTTGTTAATGTTGCTT+TGG | - | chr7.3:41303910-41303929 | MS.gene89831:intron | 40.0% |
! | GACTTTGCTATGGCTTCAAT+TGG | + | chr7.3:41306217-41306236 | None:intergenic | 40.0% |
! | GATGATGACGACAAAGATGA+GGG | - | chr7.3:41303261-41303280 | MS.gene89831:intron | 40.0% |
! | GATTGTTTTCACGTGTAGTC+AGG | - | chr7.3:41305427-41305446 | MS.gene89831:intron | 40.0% |
! | GCAGTGTATTTGAAGCTGAA+AGG | - | chr7.3:41304243-41304262 | MS.gene89831:intron | 40.0% |
! | GGGTTGTTCATCGAATTTTG+GGG | - | chr7.3:41302822-41302841 | MS.gene89831:CDS | 40.0% |
! | GGTTTTCCAATTCGAGCATA+AGG | + | chr7.3:41303950-41303969 | None:intergenic | 40.0% |
! | TGATGATGACGACAAAGATG+AGG | - | chr7.3:41303260-41303279 | MS.gene89831:intron | 40.0% |
!! | AGTCACACTTTGGCTCTATT+TGG | + | chr7.3:41306014-41306033 | None:intergenic | 40.0% |
!! | ATGTATGCAGGTGTTGGATT+TGG | - | chr7.3:41304411-41304430 | MS.gene89831:intron | 40.0% |
!! | TGTTGCTTTGGTTGGAATGT+TGG | - | chr7.3:41303922-41303941 | MS.gene89831:intron | 40.0% |
!! | TTGTTCATCGAATTTTGGGG+TGG | - | chr7.3:41302825-41302844 | MS.gene89831:CDS | 40.0% |
!! | TTGTTTTGTGCTACGAAGCA+CGG | + | chr7.3:41307273-41307292 | None:intergenic | 40.0% |
!! | TTTGAAGAGTGCTGCTCTTT+GGG | - | chr7.3:41306565-41306584 | MS.gene89831:CDS | 40.0% |
!! | TTTGATGGTAGTGGTGGTAA+TGG | - | chr7.3:41303189-41303208 | MS.gene89831:intron | 40.0% |
!!! | ACCTCGTCGTATTTTAGCAT+TGG | + | chr7.3:41303297-41303316 | None:intergenic | 40.0% |
!!! | TTTTGAAGAGTGCTGCTCTT+TGG | - | chr7.3:41306564-41306583 | MS.gene89831:CDS | 40.0% |
AACACACCTGCATGGATGTT+CGG | + | chr7.3:41307494-41307513 | None:intergenic | 45.0% | |
AATCCTACTGTCCAGTAGAG+GGG | - | chr7.3:41306186-41306205 | MS.gene89831:intron | 45.0% | |
AGAGCAGCACTCTTCAAAAG+AGG | + | chr7.3:41306563-41306582 | None:intergenic | 45.0% | |
AGCCATAGCAAAGTCCTGTA+TGG | - | chr7.3:41306222-41306241 | MS.gene89831:CDS | 45.0% | |
AGTCTCACAAGTGCTTATGC+CGG | + | chr7.3:41305799-41305818 | None:intergenic | 45.0% | |
ATACCAGGTCATCAATGGAC+TGG | - | chr7.3:41307538-41307557 | MS.gene89831:CDS | 45.0% | |
ATCTTCAAACACGCGATACC+AGG | - | chr7.3:41307523-41307542 | MS.gene89831:CDS | 45.0% | |
ATGACGAGTAGTAACCTGCT+AGG | + | chr7.3:41304025-41304044 | None:intergenic | 45.0% | |
ATGGCCAATTGTCAGATGAG+GGG | + | chr7.3:41304732-41304751 | None:intergenic | 45.0% | |
ATTTGTGTGAACAAGTGCGG+TGG | - | chr7.3:41302967-41302986 | MS.gene89831:CDS | 45.0% | |
CAAGAATTGTTGTCACCTGG+GGG | - | chr7.3:41306257-41306276 | MS.gene89831:intron | 45.0% | |
CAATCCTACTGTCCAGTAGA+GGG | - | chr7.3:41306185-41306204 | MS.gene89831:intron | 45.0% | |
CACCACTAATCCCTAGCATA+AGG | + | chr7.3:41305480-41305499 | None:intergenic | 45.0% | |
CACCTGCATACATTATACCC+TGG | + | chr7.3:41304404-41304423 | None:intergenic | 45.0% | |
CATGGCCAATTGTCAGATGA+GGG | + | chr7.3:41304733-41304752 | None:intergenic | 45.0% | |
CTCTTCAAAAGAGGTGGTAC+AGG | + | chr7.3:41306554-41306573 | None:intergenic | 45.0% | |
CTTATGCAGCTTTACCTAGC+AGG | - | chr7.3:41304008-41304027 | MS.gene89831:intron | 45.0% | |
GACAAAGATGAGGGGGAATT+TGG | - | chr7.3:41303270-41303289 | MS.gene89831:intron | 45.0% | |
GAGTGCGATGTTGTTGAATG+AGG | - | chr7.3:41302930-41302949 | MS.gene89831:CDS | 45.0% | |
GCAGCCTCCAACATATCAAA+AGG | + | chr7.3:41303354-41303373 | None:intergenic | 45.0% | |
GCCAATGCTAAAATACGACG+AGG | - | chr7.3:41303293-41303312 | MS.gene89831:intron | 45.0% | |
GCTAGTACTACATTGGTCGT+CGG | + | chr7.3:41307090-41307109 | None:intergenic | 45.0% | |
GGATGTGGTATTATAGGCCA+AGG | - | chr7.3:41304432-41304451 | MS.gene89831:intron | 45.0% | |
GGATTCGAACATGAGATCTG+GGG | - | chr7.3:41306278-41306297 | MS.gene89831:intron | 45.0% | |
GGGATTCGAACATGAGATCT+GGG | - | chr7.3:41306277-41306296 | MS.gene89831:intron | 45.0% | |
GTCCATACAGGACTTTGCTA+TGG | + | chr7.3:41306227-41306246 | None:intergenic | 45.0% | |
GTGCTTCGTAGCACAAAACA+AGG | - | chr7.3:41307272-41307291 | MS.gene89831:CDS | 45.0% | |
TAGGTGGAGTGGAGTACAAT+AGG | - | chr7.3:41307679-41307698 | MS.gene89831:CDS | 45.0% | |
TATGCTTCGCAATCGAATGC+TGG | - | chr7.3:41303579-41303598 | MS.gene89831:intron | 45.0% | |
TCATCTGACAATTGGCCATG+CGG | - | chr7.3:41304733-41304752 | MS.gene89831:intron | 45.0% | |
TGCAGATCTTCTTGTTGGGA+CGG | - | chr7.3:41303892-41303911 | MS.gene89831:intron | 45.0% | |
TGTTCCTGGTAGCAAAGAAG+AGG | + | chr7.3:41306508-41306527 | None:intergenic | 45.0% | |
TTCGAACATGAGACCTAGAG+AGG | - | chr7.3:41306302-41306321 | MS.gene89831:intron | 45.0% | |
TTGGCACCTTATGCTCGAAT+TGG | - | chr7.3:41303941-41303960 | MS.gene89831:CDS | 45.0% | |
! | CAATGCAGAGTGTCTGAACA+TGG | + | chr7.3:41304550-41304569 | None:intergenic | 45.0% |
! | GATTGGTCCCCAAGATTAGA+CGG | + | chr7.3:41306170-41306189 | None:intergenic | 45.0% |
! | GGTGTTGTGTTTGATGGTAG+TGG | - | chr7.3:41303180-41303199 | MS.gene89831:intron | 45.0% |
! | GTATTTGAAGCTGAAAGGCC+AGG | - | chr7.3:41304248-41304267 | MS.gene89831:intron | 45.0% |
! | GTTTTCACGTGTAGTCAGGT+GGG | - | chr7.3:41305431-41305450 | MS.gene89831:intron | 45.0% |
! | TGATGACGACAAAGATGAGG+GGG | - | chr7.3:41303263-41303282 | MS.gene89831:intron | 45.0% |
! | TGTTTTCACGTGTAGTCAGG+TGG | - | chr7.3:41305430-41305449 | MS.gene89831:intron | 45.0% |
! | TTTTAACAACCCCCCAGGAT+TGG | + | chr7.3:41306371-41306390 | None:intergenic | 45.0% |
! | TTTTCTGTGCAGCAGAGACT+TGG | - | chr7.3:41304278-41304297 | MS.gene89831:intron | 45.0% |
!! | AATGGAAGCTTTGGAAGTGG+CGG | - | chr7.3:41303207-41303226 | MS.gene89831:intron | 45.0% |
!! | AGACTCTTTGGGAGAGCTTT+TGG | - | chr7.3:41305814-41305833 | MS.gene89831:intron | 45.0% |
!! | AGTGGTGGTAATGGAAGCTT+TGG | - | chr7.3:41303198-41303217 | MS.gene89831:intron | 45.0% |
!! | CAGGGATCTTTTTGGCCTTT+AGG | - | chr7.3:41303535-41303554 | MS.gene89831:intron | 45.0% |
!! | CATCAATGGACTGGAACGTT+TGG | - | chr7.3:41307547-41307566 | MS.gene89831:CDS | 45.0% |
!! | GCGGGTTGTTCATCGAATTT+TGG | - | chr7.3:41302820-41302839 | MS.gene89831:CDS | 45.0% |
!! | GGTAATGGAAGCTTTGGAAG+TGG | - | chr7.3:41303204-41303223 | MS.gene89831:intron | 45.0% |
!! | GTTGTGTTTGATGGTAGTGG+TGG | - | chr7.3:41303183-41303202 | MS.gene89831:intron | 45.0% |
!! | TGGCATGCAGTTTGTTGACT+GGG | - | chr7.3:41307655-41307674 | MS.gene89831:CDS | 45.0% |
!! | TGTAGTCAGGTGGGTTGTTT+AGG | - | chr7.3:41305440-41305459 | MS.gene89831:intron | 45.0% |
!! | TTGAAGAGTGCTGCTCTTTG+GGG | - | chr7.3:41306566-41306585 | MS.gene89831:CDS | 45.0% |
!! | TTTGGTAGAAGCATCGCCAA+TGG | - | chr7.3:41307565-41307584 | MS.gene89831:CDS | 45.0% |
!! | ATATATATATATATATATAG+AGG | - | chr7.3:41304802-41304821 | MS.gene89831:intron | 5.0% |
!! | TATATATATATATATATATG+AGG | + | chr7.3:41305591-41305610 | None:intergenic | 5.0% |
AAACTCGGTATCTGGCCCAA+TGG | - | chr7.3:41306144-41306163 | MS.gene89831:intron | 50.0% | |
ACACACCTGCATGGATGTTC+GGG | + | chr7.3:41307493-41307512 | None:intergenic | 50.0% | |
ACGCGATACCAGGTCATCAA+TGG | - | chr7.3:41307533-41307552 | MS.gene89831:CDS | 50.0% | |
ACTGTGAAAGCCAGAGCAAC+TGG | + | chr7.3:41307605-41307624 | None:intergenic | 50.0% | |
AGCACCCCTCATCTGACAAT+TGG | - | chr7.3:41304725-41304744 | MS.gene89831:intron | 50.0% | |
ATCCATGCAGGTGTGTTCCT+TGG | - | chr7.3:41307497-41307516 | MS.gene89831:CDS | 50.0% | |
ATCCTACTGTCCAGTAGAGG+GGG | - | chr7.3:41306187-41306206 | MS.gene89831:intron | 50.0% | |
ATCTCATGTTCGAATCCCCC+AGG | + | chr7.3:41306275-41306294 | None:intergenic | 50.0% | |
CCAATCCTACTGTCCAGTAG+AGG | - | chr7.3:41306184-41306203 | MS.gene89831:intron | 50.0% | |
CCAATGGCCGTCTAATCTTG+GGG | - | chr7.3:41306160-41306179 | MS.gene89831:intron | 50.0% | |
CCCAAGATTAGACGGCCATT+GGG | + | chr7.3:41306162-41306181 | None:intergenic | 50.0% | |
CCCAATGGCCGTCTAATCTT+GGG | - | chr7.3:41306159-41306178 | MS.gene89831:intron | 50.0% | |
CCTCTACTGGACAGTAGGAT+TGG | + | chr7.3:41306187-41306206 | None:intergenic | 50.0% | |
CGTCGGAGTGATTAGAGAGA+AGG | + | chr7.3:41307073-41307092 | None:intergenic | 50.0% | |
CTCACCTCTTCTTTGCTACC+AGG | - | chr7.3:41306501-41306520 | MS.gene89831:CDS | 50.0% | |
GCAGCACTCTTCAAAAGAGG+TGG | + | chr7.3:41306560-41306579 | None:intergenic | 50.0% | |
GCATGGCCAATTGTCAGATG+AGG | + | chr7.3:41304734-41304753 | None:intergenic | 50.0% | |
GCGTGTTTGAAGATACCCCA+AGG | + | chr7.3:41307517-41307536 | None:intergenic | 50.0% | |
GGGGATTCGAACATGAGATC+TGG | - | chr7.3:41306276-41306295 | MS.gene89831:intron | 50.0% | |
TCCATGCAGGTGTGTTCCTT+GGG | - | chr7.3:41307498-41307517 | MS.gene89831:CDS | 50.0% | |
TGCAATCGTGAACTCTCTGC+AGG | + | chr7.3:41305289-41305308 | None:intergenic | 50.0% | |
TGTCGGGAAAGAAGCTGGTT+TGG | - | chr7.3:41302861-41302880 | MS.gene89831:CDS | 50.0% | |
TGTTTCCCGAACATCCATGC+AGG | - | chr7.3:41307485-41307504 | MS.gene89831:CDS | 50.0% | |
TTCACCAACAGGCCAATCCT+GGG | - | chr7.3:41306356-41306375 | MS.gene89831:intron | 50.0% | |
TTGGAGGCTGCTAAGACTGT+GGG | - | chr7.3:41303363-41303382 | MS.gene89831:intron | 50.0% | |
! | AGGGGGAAGTGATAGTGTTG+TGG | - | chr7.3:41303095-41303114 | MS.gene89831:intron | 50.0% |
! | GAGTCGGATTCCAAGAGTGT+TGG | - | chr7.3:41303144-41303163 | MS.gene89831:intron | 50.0% |
! | GGGGGAAGTGATAGTGTTGT+GGG | - | chr7.3:41303096-41303115 | MS.gene89831:intron | 50.0% |
! | GTCGGGAAAGAAGCTGGTTT+GGG | - | chr7.3:41302862-41302881 | MS.gene89831:CDS | 50.0% |
! | GTGGCTCGAGTTGTAAGTGT+CGG | - | chr7.3:41302844-41302863 | MS.gene89831:CDS | 50.0% |
! | GTTCCAGTCCATTGATGACC+TGG | + | chr7.3:41307544-41307563 | None:intergenic | 50.0% |
! | TGGCTCGAGTTGTAAGTGTC+GGG | - | chr7.3:41302845-41302864 | MS.gene89831:CDS | 50.0% |
!! | AAAGTGCCGGTGTTGGACAT+CGG | + | chr7.3:41307133-41307152 | None:intergenic | 50.0% |
!! | AGTTTGTTGACTGGGCTAGG+TGG | - | chr7.3:41307663-41307682 | MS.gene89831:CDS | 50.0% |
!! | ATTGTCAGATGAGGGGTGCT+AGG | + | chr7.3:41304725-41304744 | None:intergenic | 50.0% |
!! | CGAGGTATTGAGAGAGACAG+AGG | - | chr7.3:41303311-41303330 | MS.gene89831:intron | 50.0% |
!! | GCAGGTGTTGGATTTGGATG+TGG | - | chr7.3:41304417-41304436 | MS.gene89831:intron | 50.0% |
!! | GTAAGTGTCGGGAAAGAAGC+TGG | - | chr7.3:41302856-41302875 | MS.gene89831:CDS | 50.0% |
!! | GTAATCGAAAGTGCCGGTGT+TGG | + | chr7.3:41307140-41307159 | None:intergenic | 50.0% |
!! | GTCAGGTGGGTTGTTTAGGA+AGG | - | chr7.3:41305444-41305463 | MS.gene89831:intron | 50.0% |
!! | GTGGCATGCAGTTTGTTGAC+TGG | - | chr7.3:41307654-41307673 | MS.gene89831:CDS | 50.0% |
!! | GTTGCTCTGGCTTTCACAGT+TGG | - | chr7.3:41307605-41307624 | MS.gene89831:CDS | 50.0% |
!! | TCGGGAAAGAAGCTGGTTTG+GGG | - | chr7.3:41302863-41302882 | MS.gene89831:CDS | 50.0% |
!! | TGCAGTTTGTTGACTGGGCT+AGG | - | chr7.3:41307660-41307679 | MS.gene89831:CDS | 50.0% |
!! | TGTGTTGGGCTAGTCCATAC+AGG | + | chr7.3:41306239-41306258 | None:intergenic | 50.0% |
ACAGCAGGCTGTGAATCAGC+CGG | + | chr7.3:41303054-41303073 | None:intergenic | 55.0% | |
ACGAAGCACGGACACATACG+CGG | + | chr7.3:41307261-41307280 | None:intergenic | 55.0% | |
ACGGACACATACGCGGATTC+TGG | + | chr7.3:41307254-41307273 | None:intergenic | 55.0% | |
AGCATCGCCAATGGCAAAGC+AGG | - | chr7.3:41307574-41307593 | MS.gene89831:CDS | 55.0% | |
CCATGCAGGTGTGTTCCTTG+GGG | - | chr7.3:41307499-41307518 | MS.gene89831:CDS | 55.0% | |
CCCCAAGATTAGACGGCCAT+TGG | + | chr7.3:41306163-41306182 | None:intergenic | 55.0% | |
CTTCACCAACAGGCCAATCC+TGG | - | chr7.3:41306355-41306374 | MS.gene89831:intron | 55.0% | |
GCCCAATGGCCGTCTAATCT+TGG | - | chr7.3:41306158-41306177 | MS.gene89831:intron | 55.0% | |
GGTGGAACCTGCTTTGCCAT+TGG | + | chr7.3:41307584-41307603 | None:intergenic | 55.0% | |
GTGAAAGCCAGAGCAACTGG+TGG | + | chr7.3:41307602-41307621 | None:intergenic | 55.0% | |
GTGTGTCCGATGTCCAACAC+CGG | - | chr7.3:41307124-41307143 | MS.gene89831:CDS | 55.0% | |
GTTGGAGGCTGCTAAGACTG+TGG | - | chr7.3:41303362-41303381 | MS.gene89831:intron | 55.0% | |
TAGAGAGGAGCAGACTCCCA+GGG | - | chr7.3:41306317-41306336 | MS.gene89831:intron | 55.0% | |
TCACCAACAGGCCAATCCTG+GGG | - | chr7.3:41306357-41306376 | MS.gene89831:intron | 55.0% | |
TCCTACTGTCCAGTAGAGGG+GGG | - | chr7.3:41306188-41306207 | MS.gene89831:intron | 55.0% | |
TGTGTGAACAAGTGCGGTGG+TGG | - | chr7.3:41302970-41302989 | MS.gene89831:CDS | 55.0% | |
! | TGGCCTGTTGGTGAAGGCTT+GGG | + | chr7.3:41306351-41306370 | None:intergenic | 55.0% |
! | TTGAGAGAGACAGAGGCACG+CGG | - | chr7.3:41303318-41303337 | MS.gene89831:intron | 55.0% |
! | TTGGCCTGTTGGTGAAGGCT+TGG | + | chr7.3:41306352-41306371 | None:intergenic | 55.0% |
!! | CAGGATTGGCCTGTTGGTGA+AGG | + | chr7.3:41306357-41306376 | None:intergenic | 55.0% |
AATTGGGTCCCCCCCTCTAC+TGG | + | chr7.3:41306200-41306219 | None:intergenic | 60.0% | |
ACCAACAGGCCAATCCTGGG+GGG | - | chr7.3:41306359-41306378 | MS.gene89831:intron | 60.0% | |
AGGCTTGGGACCTATAGCCC+TGG | + | chr7.3:41306337-41306356 | None:intergenic | 60.0% | |
CACCAACAGGCCAATCCTGG+GGG | - | chr7.3:41306358-41306377 | MS.gene89831:intron | 60.0% | |
CCCCAAGGAACACACCTGCA+TGG | + | chr7.3:41307502-41307521 | None:intergenic | 60.0% | |
CCTACTGTCCAGTAGAGGGG+GGG | - | chr7.3:41306189-41306208 | MS.gene89831:intron | 60.0% | |
CTAGAGAGGAGCAGACTCCC+AGG | - | chr7.3:41306316-41306335 | MS.gene89831:intron | 60.0% | |
CTGGGAGTCTGCTCCTCTCT+AGG | + | chr7.3:41306318-41306337 | None:intergenic | 60.0% | |
GAGCAGACTCCCAGGGCTAT+AGG | - | chr7.3:41306324-41306343 | MS.gene89831:intron | 60.0% | |
GCAGGTTCCACCAGTTGCTC+TGG | - | chr7.3:41307592-41307611 | MS.gene89831:CDS | 60.0% | |
GGCTTGGGACCTATAGCCCT+GGG | + | chr7.3:41306336-41306355 | None:intergenic | 60.0% | |
GGTCCCAAGCCTTCACCAAC+AGG | - | chr7.3:41306345-41306364 | MS.gene89831:intron | 60.0% | |
! | GTTGACTGGGCTAGGTGGAG+TGG | - | chr7.3:41307668-41307687 | MS.gene89831:CDS | 60.0% |
!! | AGCTTTGGAAGTGGCGGAGC+AGG | - | chr7.3:41303213-41303232 | MS.gene89831:intron | 60.0% |
CATGTGCATGTCGCAGCCGC+CGG | - | chr7.3:41303032-41303051 | MS.gene89831:intron | 65.0% | |
CCCCCCCTCTACTGGACAGT+AGG | + | chr7.3:41306192-41306211 | None:intergenic | 65.0% | |
GCAGGCTGTGAATCAGCCGG+CGG | + | chr7.3:41303051-41303070 | None:intergenic | 65.0% | |
! | AGTGGCGGAGCAGGAGATGG+CGG | - | chr7.3:41303222-41303241 | MS.gene89831:intron | 65.0% |
! | GGAAGTGGCGGAGCAGGAGA+TGG | - | chr7.3:41303219-41303238 | MS.gene89831:intron | 65.0% |
!! | ACCCCCCAGGATTGGCCTGT+TGG | + | chr7.3:41306363-41306382 | None:intergenic | 65.0% |
CGGCGGCTGCGACATGCACA+TGG | + | chr7.3:41303034-41303053 | None:intergenic | 70.0% | |
! | GCAGGAGATGGCGGTGGTGG+CGG | - | chr7.3:41303231-41303250 | MS.gene89831:intron | 70.0% |
! | GGAGCAGGAGATGGCGGTGG+TGG | - | chr7.3:41303228-41303247 | MS.gene89831:intron | 70.0% |
! | GGCGGAGCAGGAGATGGCGG+TGG | - | chr7.3:41303225-41303244 | MS.gene89831:intron | 75.0% |
!! | GGAGATGGCGGTGGTGGCGG+TGG | - | chr7.3:41303234-41303253 | MS.gene89831:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 41302817 | 41307700 | 41302817 | ID=MS.gene89831 |
chr7.3 | mRNA | 41302817 | 41307700 | 41302817 | ID=MS.gene89831.t1;Parent=MS.gene89831 |
chr7.3 | exon | 41307092 | 41307700 | 41307092 | ID=MS.gene89831.t1.exon1;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41307092 | 41307700 | 41307092 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41306881 | 41306979 | 41306881 | ID=MS.gene89831.t1.exon2;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41306881 | 41306979 | 41306881 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41306488 | 41306708 | 41306488 | ID=MS.gene89831.t1.exon3;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41306488 | 41306708 | 41306488 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41306201 | 41306270 | 41306201 | ID=MS.gene89831.t1.exon4;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41306201 | 41306270 | 41306201 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41306033 | 41306112 | 41306033 | ID=MS.gene89831.t1.exon5;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41306033 | 41306112 | 41306033 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41303930 | 41303994 | 41303930 | ID=MS.gene89831.t1.exon6;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41303930 | 41303994 | 41303930 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
chr7.3 | exon | 41302817 | 41303010 | 41302817 | ID=MS.gene89831.t1.exon7;Parent=MS.gene89831.t1 |
chr7.3 | CDS | 41302817 | 41303010 | 41302817 | ID=cds.MS.gene89831.t1;Parent=MS.gene89831.t1 |
Gene Sequence |
Protein sequence |