AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89842

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89842.t1 MTR_5g019680 92.788 208 14 1 1 208 1 207 1.90e-134 375
MS.gene89842.t1 MTR_5g019650 81.532 222 28 3 1 210 1 221 3.55e-118 335
MS.gene89842.t1 MTR_4g107650 38.776 147 73 3 31 160 62 208 1.15e-22 94.0
MS.gene89842.t1 MTR_3g086790 60.811 74 29 0 54 127 60 133 5.43e-22 91.7
MS.gene89842.t1 MTR_6g007647 47.273 110 49 2 54 156 33 140 6.33e-22 90.5
MS.gene89842.t1 MTR_6g007647 47.273 110 49 2 54 156 67 174 8.95e-22 90.5
MS.gene89842.t1 MTR_8g089895 56.250 80 35 0 45 124 45 124 9.57e-22 90.9
MS.gene89842.t1 MTR_6g011610 50.505 99 49 0 45 143 87 185 1.50e-20 87.0
MS.gene89842.t1 MTR_6g011610 50.505 99 49 0 45 143 68 166 1.62e-20 86.7
MS.gene89842.t1 MTR_1g061660 45.545 101 55 0 54 154 59 159 2.02e-20 85.9
MS.gene89842.t1 MTR_5g038280 60.563 71 28 0 54 124 87 157 3.18e-20 87.0
MS.gene89842.t1 MTR_8g468210 44.898 98 54 0 46 143 69 166 4.80e-20 85.9
MS.gene89842.t1 MTR_5g039000 44.737 114 58 1 46 159 69 177 8.05e-20 85.5
MS.gene89842.t1 MTR_3g092150 47.959 98 44 1 56 153 40 130 1.04e-19 84.3
MS.gene89842.t1 MTR_8g469430 58.571 70 29 0 54 123 89 158 1.28e-19 84.7
MS.gene89842.t1 MTR_7g103340 45.918 98 53 0 48 145 57 154 5.75e-19 82.0
MS.gene89842.t1 MTR_3g080100 43.396 106 60 0 48 153 14 119 6.93e-19 81.6
MS.gene89842.t1 MTR_3g080100 44.660 103 57 0 51 153 56 158 1.11e-18 81.6
MS.gene89842.t1 MTR_8g026960 44.248 113 63 0 58 170 38 150 2.28e-17 78.2
MS.gene89842.t1 MTR_7g010020 47.778 90 47 0 54 143 80 169 1.18e-15 73.9
MS.gene89842.t1 MTR_4g084750 43.564 101 43 1 54 154 65 151 1.36e-13 67.0
MS.gene89842.t1 MTR_4g100550 43.564 101 43 1 54 154 120 206 2.26e-13 67.8
MS.gene89842.t1 MTR_8g006705 45.263 95 47 1 54 143 146 240 8.73e-13 66.2
MS.gene89842.t1 MTR_1g054285 38.938 113 55 1 42 154 142 240 1.24e-12 65.9
MS.gene89842.t1 MTR_2g061030 38.017 121 61 1 34 154 180 286 1.58e-12 65.9
MS.gene89842.t1 MTR_4g097600 45.263 95 47 1 54 143 127 221 1.77e-12 65.1
MS.gene89842.t1 MTR_1g017090 42.574 101 44 1 54 154 130 216 2.03e-12 65.1
MS.gene89842.t1 MTR_7g093430 40.566 106 49 1 49 154 155 246 9.82e-12 63.2
MS.gene89842.t1 MTR_5g014890 45.263 95 47 1 54 143 123 217 1.53e-11 62.4
MS.gene89842.t1 MTR_5g013010 43.158 95 49 1 54 143 136 230 6.26e-11 60.8
MS.gene89842.t1 MTR_3g103590 43.836 73 41 0 52 124 143 215 6.59e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89842.t1 AT4G36740 52.133 211 91 7 7 210 10 217 1.48e-57 181
MS.gene89842.t1 AT2G18550 46.018 226 100 9 1 210 1 220 4.08e-57 180
MS.gene89842.t1 AT4G36740 52.607 211 89 8 7 210 10 216 7.72e-57 179
MS.gene89842.t1 AT5G66700 46.364 220 104 4 5 210 9 228 1.49e-47 156
MS.gene89842.t1 AT3G01470 32.850 207 109 5 2 178 13 219 4.96e-24 96.7
MS.gene89842.t1 AT1G69780 38.961 154 80 3 2 143 23 174 1.67e-23 95.5
MS.gene89842.t1 AT4G40060 63.380 71 26 0 54 124 59 129 6.69e-22 91.3
MS.gene89842.t1 AT2G22430 64.789 71 25 0 54 124 62 132 6.79e-22 91.7
MS.gene89842.t1 AT5G65310 57.143 77 33 0 43 119 43 119 2.74e-21 89.7
MS.gene89842.t1 AT5G65310 57.143 77 33 0 43 119 61 137 3.19e-21 89.7
MS.gene89842.t1 AT1G26960 42.647 136 73 1 54 184 71 206 3.59e-21 88.6
MS.gene89842.t1 AT5G53980 36.552 145 90 1 45 187 2 146 1.23e-20 84.7
MS.gene89842.t1 AT2G46680 48.000 100 51 1 48 146 26 125 5.76e-20 85.5
MS.gene89842.t1 AT5G03790 39.683 126 75 1 14 139 38 162 5.95e-20 84.7
MS.gene89842.t1 AT2G46680 45.370 108 52 1 48 155 26 126 7.17e-20 85.1
MS.gene89842.t1 AT5G03790 40.496 121 71 1 19 139 43 162 1.04e-19 83.2
MS.gene89842.t1 AT2G36610 45.370 108 51 2 46 145 63 170 5.04e-19 81.3
MS.gene89842.t1 AT3G01220 51.852 81 38 1 45 124 77 157 4.70e-18 80.5
MS.gene89842.t1 AT3G61890 44.444 99 55 0 57 155 33 131 4.82e-18 79.7
MS.gene89842.t1 AT5G15150 58.209 67 28 0 54 120 115 181 8.06e-18 80.5
MS.gene89842.t1 AT1G27045 40.152 132 66 1 52 170 15 146 2.14e-17 76.6
MS.gene89842.t1 AT1G27045 40.152 132 66 1 52 170 23 154 2.31e-17 77.0
MS.gene89842.t1 AT1G27045 40.152 132 66 1 52 170 23 154 2.31e-17 77.0
MS.gene89842.t1 AT1G27045 42.149 121 57 1 52 159 66 186 3.03e-17 77.4
MS.gene89842.t1 AT1G27045 55.882 68 30 0 52 119 66 133 3.02e-16 75.1
MS.gene89842.t1 AT2G22800 45.161 93 46 1 54 141 113 205 1.42e-12 65.5
MS.gene89842.t1 AT4G16780 41.905 105 51 2 44 143 124 223 2.97e-12 64.7
MS.gene89842.t1 AT2G01430 37.607 117 55 2 54 166 139 241 4.10e-12 63.9
MS.gene89842.t1 AT5G47370 35.659 129 78 1 20 143 96 224 9.92e-12 63.2
MS.gene89842.t1 AT4G17460 40.385 104 57 1 45 143 126 229 1.64e-11 62.4
MS.gene89842.t1 AT4G37790 44.086 93 47 1 54 141 126 218 1.72e-11 62.4
MS.gene89842.t1 AT5G06710 36.667 120 62 1 35 154 171 276 3.69e-11 61.6

Find 39 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGTTGAGAAATTATT+TGG 0.079303 5.3:-11307297 None:intergenic
TCCACCTAGCCCTTCGATTC+TGG 0.220585 5.3:-11307622 None:intergenic
TGATGAACAAATGAAAATTT+TGG 0.274227 5.3:+11307502 MS.gene89842:CDS
GAACCAAACTGCAACTTGTC+TGG 0.307826 5.3:-11307600 None:intergenic
GAAGTACTAGAGCTACTATT+TGG 0.364392 5.3:-11308709 None:intergenic
ATCCCAGACAAGTTGCAGTT+TGG 0.404850 5.3:+11307597 MS.gene89842:CDS
TTCACAATCCATGGAAATAG+TGG 0.417032 5.3:+11308738 MS.gene89842:CDS
TTCTTACTACGCTTGCGTCT+TGG 0.426044 5.3:-11307422 None:intergenic
TATAAAGATTAATCCATTCC+TGG 0.431532 5.3:-11308849 None:intergenic
TTCATCAATTTCACAATCCA+TGG 0.435367 5.3:+11308729 MS.gene89842:CDS
ACCTTGTTGAGAAATTATTT+GGG 0.435398 5.3:-11307296 None:intergenic
AGAGGTATACCTTGGTTTCA+AGG 0.440743 5.3:-11307718 None:intergenic
ATTTGGGTGTATTCACAAGC+TGG 0.458844 5.3:-11307280 None:intergenic
ACTGAGACATAAGCATCATT+TGG 0.463969 5.3:-11307252 None:intergenic
TCAAATTCATCAAGTAATTG+TGG 0.464011 5.3:-11308763 None:intergenic
TTGTGGGTCCACTATTTCCA+TGG 0.473816 5.3:-11308746 None:intergenic
GATAGACTTGCAATGGAGCT+TGG 0.475779 5.3:+11307569 MS.gene89842:CDS
AAGGAGACACTTCTCAAGAA+TGG 0.492858 5.3:-11307699 None:intergenic
CAAATTCATCAAGTAATTGT+GGG 0.494706 5.3:-11308762 None:intergenic
TAAACTTGAGTCAGAGAAGA+AGG 0.499532 5.3:+11307547 MS.gene89842:CDS
AACCAAACTGCAACTTGTCT+GGG 0.501567 5.3:-11307599 None:intergenic
CAGTTTGGTTCCAGAATCGA+AGG 0.504708 5.3:+11307612 MS.gene89842:CDS
TTTGGGTGTATTCACAAGCT+GGG 0.519334 5.3:-11307279 None:intergenic
GGTTCCAGAATCGAAGGGCT+AGG 0.526167 5.3:+11307618 MS.gene89842:CDS
ATTACTTCAACGGCCAGGAA+TGG 0.529342 5.3:+11308836 MS.gene89842:CDS
TTGAAGTAATATGTCGCATC+CGG 0.533058 5.3:-11308823 None:intergenic
GCAGCTTTCTGAGGCAGAGA+AGG 0.540038 5.3:+11308666 MS.gene89842:CDS
GAAGAAGGATAGACTTGCAA+TGG 0.545678 5.3:+11307562 MS.gene89842:CDS
AGCTACTATTTGGCTCTCGA+AGG 0.571565 5.3:-11308699 None:intergenic
GATGCGACATATTACTTCAA+CGG 0.573154 5.3:+11308826 MS.gene89842:CDS
GCTAACAGAGCAGCTTTCTG+AGG 0.593252 5.3:+11308657 MS.gene89842:CDS
CGTAGTAAGAAGAACAAAGG+TGG 0.606299 5.3:+11307434 MS.gene89842:CDS
GAGACACTTCTCAAGAATGG+TGG 0.632257 5.3:-11307696 None:intergenic
GAAGTGTCTCCTTGAAACCA+AGG 0.638232 5.3:+11307709 MS.gene89842:CDS
GACATATTACTTCAACGGCC+AGG 0.639581 5.3:+11308831 MS.gene89842:CDS
ACCCAAATAATTTCTCAACA+AGG 0.645027 5.3:+11307295 MS.gene89842:CDS
TCCAGAATCGAAGGGCTAGG+TGG 0.655135 5.3:+11307621 MS.gene89842:CDS
AAGCGTAGTAAGAAGAACAA+AGG 0.668285 5.3:+11307431 MS.gene89842:CDS
AGTTTGGTTCCAGAATCGAA+GGG 0.690392 5.3:+11307613 MS.gene89842:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAATTGAACATATA+AGG - chr5.3:11308624-11308643 None:intergenic 10.0%
!! AATATATAAAAACAAAAACA+AGG + chr5.3:11308331-11308350 MS.gene89842:intron 10.0%
!! ATAATAAATTAAATAAGAAG+AGG - chr5.3:11307749-11307768 None:intergenic 10.0%
!!! ATTTTTGTTATGTTTTTTTA+GGG + chr5.3:11307384-11307403 MS.gene89842:intron 10.0%
!!! TATTTTTGTTATGTTTTTTT+AGG + chr5.3:11307383-11307402 MS.gene89842:intron 10.0%
!! AAAATGAAGAAAATATTGTA+CGG - chr5.3:11308423-11308442 None:intergenic 15.0%
!!! AAAATTTTGGAAGAAAATTT+TGG + chr5.3:11307515-11307534 MS.gene89842:CDS 15.0%
!!! ACTTTATCATTTTTCATTTA+AGG - chr5.3:11308147-11308166 None:intergenic 15.0%
!!! CTTTATCATTTTTCATTTAA+GGG - chr5.3:11308146-11308165 None:intergenic 15.0%
!!! TTTATCATTTTTCATTTAAG+GGG - chr5.3:11308145-11308164 None:intergenic 15.0%
!!! TTTTTGTTATGTTTTTTTAG+GGG + chr5.3:11307385-11307404 MS.gene89842:intron 15.0%
!! ATTGAACATATAAGGTAATT+AGG - chr5.3:11308616-11308635 None:intergenic 20.0%
!! CACTAGTAATATAATATTGT+TGG - chr5.3:11307897-11307916 None:intergenic 20.0%
!! TCTAAGCAAAGATTATTAAA+AGG - chr5.3:11308572-11308591 None:intergenic 20.0%
!!! GTACAATATTTTCTTCATTT+TGG + chr5.3:11308422-11308441 MS.gene89842:intron 20.0%
!!! TGATGAACAAATGAAAATTT+TGG + chr5.3:11307502-11307521 MS.gene89842:CDS 20.0%
! AACCTTGTTGAGAAATTATT+TGG - chr5.3:11307300-11307319 None:intergenic 25.0%
! ACCAAATATTGAACAAAAAG+AGG + chr5.3:11307471-11307490 MS.gene89842:CDS 25.0%
! ACCTTGTTGAGAAATTATTT+GGG - chr5.3:11307299-11307318 None:intergenic 25.0%
! AGAAAATATTGTACGGAATT+AGG - chr5.3:11308416-11308435 None:intergenic 25.0%
! ATTCTCTCTTTCAACATTTA+GGG - chr5.3:11308071-11308090 None:intergenic 25.0%
! CAAATTCATCAAGTAATTGT+GGG - chr5.3:11308765-11308784 None:intergenic 25.0%
! GAGAACTTTAATAATGTGAA+CGG - chr5.3:11308235-11308254 None:intergenic 25.0%
! TAATATTGTTGGAGAAATGA+TGG - chr5.3:11307886-11307905 None:intergenic 25.0%
! TATAAAGATTAATCCATTCC+TGG - chr5.3:11308852-11308871 None:intergenic 25.0%
! TATTCTCTCTTTCAACATTT+AGG - chr5.3:11308072-11308091 None:intergenic 25.0%
! TCAAATTCATCAAGTAATTG+TGG - chr5.3:11308766-11308785 None:intergenic 25.0%
!! TCCTCTTTTTGTTCAATATT+TGG - chr5.3:11307475-11307494 None:intergenic 25.0%
AACACTAGTAACGTCAATTT+AGG + chr5.3:11307941-11307960 MS.gene89842:intron 30.0%
ACACTAGTAACGTCAATTTA+GGG + chr5.3:11307942-11307961 MS.gene89842:intron 30.0%
ACATAACATGAATGATCATG+TGG - chr5.3:11308267-11308286 None:intergenic 30.0%
ACCCAAATAATTTCTCAACA+AGG + chr5.3:11307295-11307314 MS.gene89842:CDS 30.0%
TCTACTTCATGATAACAAGT+TGG - chr5.3:11308461-11308480 None:intergenic 30.0%
TTCATCAATTTCACAATCCA+TGG + chr5.3:11308729-11308748 MS.gene89842:CDS 30.0%
TTCTCTCTTTCAACATTTAG+GGG - chr5.3:11308070-11308089 None:intergenic 30.0%
!! AGTGTTGTTTGTTGTCTTTA+AGG - chr5.3:11308375-11308394 None:intergenic 30.0%
AAATAAGAAGAGGAAGCAAG+AGG - chr5.3:11307739-11307758 None:intergenic 35.0%
AAGCGTAGTAAGAAGAACAA+AGG + chr5.3:11307431-11307450 MS.gene89842:CDS 35.0%
ACTGAGACATAAGCATCATT+TGG - chr5.3:11307255-11307274 None:intergenic 35.0%
ATTGTTGGAGAAATGATGGT+TGG - chr5.3:11307882-11307901 None:intergenic 35.0%
CTTTAATAATGTGAACGGCT+TGG - chr5.3:11308230-11308249 None:intergenic 35.0%
GATGCGACATATTACTTCAA+CGG + chr5.3:11308826-11308845 MS.gene89842:CDS 35.0%
TAAACTTGAGTCAGAGAAGA+AGG + chr5.3:11307547-11307566 MS.gene89842:CDS 35.0%
TTCACAATCCATGGAAATAG+TGG + chr5.3:11308738-11308757 MS.gene89842:CDS 35.0%
TTGAAAGAGAGAATAAGCAC+TGG + chr5.3:11308077-11308096 MS.gene89842:intron 35.0%
TTGAAGTAATATGTCGCATC+CGG - chr5.3:11308826-11308845 None:intergenic 35.0%
! ACATTGATTAGACGGTAATG+GGG - chr5.3:11308514-11308533 None:intergenic 35.0%
! GAAGTACTAGAGCTACTATT+TGG - chr5.3:11308712-11308731 None:intergenic 35.0%
! GACATTGATTAGACGGTAAT+GGG - chr5.3:11308515-11308534 None:intergenic 35.0%
! TTCATTTTGGACCTTTCTCA+AGG + chr5.3:11308435-11308454 MS.gene89842:intron 35.0%
!! TGATGATGTGTTTTTCATGC+CGG + chr5.3:11308804-11308823 MS.gene89842:CDS 35.0%
AACCAAACTGCAACTTGTCT+GGG - chr5.3:11307602-11307621 None:intergenic 40.0%
AAGGAGACACTTCTCAAGAA+TGG - chr5.3:11307702-11307721 None:intergenic 40.0%
ATATGCACGTTCATATGTGG+TGG - chr5.3:11308182-11308201 None:intergenic 40.0%
ATGCTACCATGTTTCTTCTC+TGG + chr5.3:11307970-11307989 MS.gene89842:intron 40.0%
ATTTGGGTGTATTCACAAGC+TGG - chr5.3:11307283-11307302 None:intergenic 40.0%
CGTAGTAAGAAGAACAAAGG+TGG + chr5.3:11307434-11307453 MS.gene89842:CDS 40.0%
CTCATATGCACGTTCATATG+TGG - chr5.3:11308185-11308204 None:intergenic 40.0%
GAAGAAGGATAGACTTGCAA+TGG + chr5.3:11307562-11307581 MS.gene89842:CDS 40.0%
TAATGAAAGAGACATGCACG+TGG - chr5.3:11308543-11308562 None:intergenic 40.0%
TATGCACGTTCATATGTGGT+GGG - chr5.3:11308181-11308200 None:intergenic 40.0%
TTTGGGTGTATTCACAAGCT+GGG - chr5.3:11307282-11307301 None:intergenic 40.0%
! AGAGGTATACCTTGGTTTCA+AGG - chr5.3:11307721-11307740 None:intergenic 40.0%
! AGTTTGGTTCCAGAATCGAA+GGG + chr5.3:11307613-11307632 MS.gene89842:CDS 40.0%
! GGACATTGATTAGACGGTAA+TGG - chr5.3:11308516-11308535 None:intergenic 40.0%
! GGTGTAGGACATTGATTAGA+CGG - chr5.3:11308522-11308541 None:intergenic 40.0%
!! TAACAAGTTGGCCTTGAGAA+AGG - chr5.3:11308449-11308468 None:intergenic 40.0%
AGACCACCAGAGAAGAAACA+TGG - chr5.3:11307979-11307998 None:intergenic 45.0%
ATCCCAGACAAGTTGCAGTT+TGG + chr5.3:11307597-11307616 MS.gene89842:CDS 45.0%
ATGAACGTGCATATGAGCTC+TGG + chr5.3:11308188-11308207 MS.gene89842:intron 45.0%
ATTACTTCAACGGCCAGGAA+TGG + chr5.3:11308836-11308855 MS.gene89842:CDS 45.0%
CTACCATGTTTCTTCTCTGG+TGG + chr5.3:11307973-11307992 MS.gene89842:intron 45.0%
GAACCAAACTGCAACTTGTC+TGG - chr5.3:11307603-11307622 None:intergenic 45.0%
GACATATTACTTCAACGGCC+AGG + chr5.3:11308831-11308850 MS.gene89842:CDS 45.0%
GAGACACTTCTCAAGAATGG+TGG - chr5.3:11307699-11307718 None:intergenic 45.0%
GATAGACTTGCAATGGAGCT+TGG + chr5.3:11307569-11307588 MS.gene89842:CDS 45.0%
TGAACGTGCATATGAGCTCT+GGG + chr5.3:11308189-11308208 MS.gene89842:intron 45.0%
TTCTTACTACGCTTGCGTCT+TGG - chr5.3:11307425-11307444 None:intergenic 45.0%
TTGCTTTGTCCTGAAGAACC+CGG - chr5.3:11308110-11308129 None:intergenic 45.0%
TTGTGGGTCCACTATTTCCA+TGG - chr5.3:11308749-11308768 None:intergenic 45.0%
! AGGAAGCAAGAGGTATACCT+TGG - chr5.3:11307729-11307748 None:intergenic 45.0%
! CAGTTTGGTTCCAGAATCGA+AGG + chr5.3:11307612-11307631 MS.gene89842:CDS 45.0%
! GAAGTGTCTCCTTGAAACCA+AGG + chr5.3:11307709-11307728 MS.gene89842:CDS 45.0%
!! AATAAGCACTGGCATGCAAC+CGG + chr5.3:11308088-11308107 MS.gene89842:intron 45.0%
!! ACGGTAATGGGGTTTCACTT+GGG - chr5.3:11308503-11308522 None:intergenic 45.0%
!! AGCTACTATTTGGCTCTCGA+AGG - chr5.3:11308702-11308721 None:intergenic 45.0%
AAGAGACATGCACGTGGTGT+AGG - chr5.3:11308537-11308556 None:intergenic 50.0%
GCTAACAGAGCAGCTTTCTG+AGG + chr5.3:11308657-11308676 MS.gene89842:CDS 50.0%
!! ATAAGCACTGGCATGCAACC+GGG + chr5.3:11308089-11308108 MS.gene89842:intron 50.0%
!! GACGGTAATGGGGTTTCACT+TGG - chr5.3:11308504-11308523 None:intergenic 50.0%
GGTTCCAGAATCGAAGGGCT+AGG + chr5.3:11307618-11307637 MS.gene89842:CDS 55.0%
TCCACCTAGCCCTTCGATTC+TGG - chr5.3:11307625-11307644 None:intergenic 55.0%
TCCAGAATCGAAGGGCTAGG+TGG + chr5.3:11307621-11307640 MS.gene89842:CDS 55.0%
!! GCAGCTTTCTGAGGCAGAGA+AGG + chr5.3:11308666-11308685 MS.gene89842:CDS 55.0%
GGCATGCAACCGGGTTCTTC+AGG + chr5.3:11308098-11308117 MS.gene89842:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 11307238 11308876 11307238 ID=MS.gene89842
chr5.3 mRNA 11307238 11308876 11307238 ID=MS.gene89842.t1;Parent=MS.gene89842
chr5.3 exon 11307238 11307316 11307238 ID=MS.gene89842.t1.exon1;Parent=MS.gene89842.t1
chr5.3 CDS 11307238 11307316 11307238 ID=cds.MS.gene89842.t1;Parent=MS.gene89842.t1
chr5.3 exon 11307405 11307730 11307405 ID=MS.gene89842.t1.exon2;Parent=MS.gene89842.t1
chr5.3 CDS 11307405 11307730 11307405 ID=cds.MS.gene89842.t1;Parent=MS.gene89842.t1
chr5.3 exon 11308649 11308876 11308649 ID=MS.gene89842.t1.exon3;Parent=MS.gene89842.t1
chr5.3 CDS 11308649 11308876 11308649 ID=cds.MS.gene89842.t1;Parent=MS.gene89842.t1
Gene Sequence

>MS.gene89842

ATGAATCATCAAGACCAAATGATGCTTATGTCTCAGTTATTCCCAGCTTGTGAATACACCCAAATAATTTCTCAACAAGGTTAGTATCATATTAAATTAATACATAACATTTTATTGTATCATAAAAATTTCTATGAAGTTATAATATTTTTGTTATGTTTTTTTAGGGGAGAAGAAGCTAAAGCCAAGACGCAAGCGTAGTAAGAAGAACAAAGGTGGAGAAAACAGTGCTAACCAAATATTGAACAAAAAGAGGAAATTGAGTGATGAACAAATGAAAATTTTGGAAGAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAGACTTGCAATGGAGCTTGGTTTAGATCCCAGACAAGTTGCAGTTTGGTTCCAGAATCGAAGGGCTAGGTGGAAGAACAAGAAACTTGAAGAAGAGTACTTAACTCTTAAAAAAATTCATGAATCCACCATTCTTGAGAAGTGTCTCCTTGAAACCAAGGTATACCTCTTGCTTCCTCTTCTTATTTAATTTATTATTGCAACTAGATACAATTTTATTAAACTATGTTAACATGTTTTTTAATTAACTATTATTAAAAATTAAAATCAGTTGATTGAATTATAACTTGACATCAAAATTTTAATTTCCAACCATCATTTCTCCAACAATATTATATTACTAGTGTTTTGTTTTTATTTGTCTCAACGCAACACTAGTAACGTCAATTTAGGGCAAGCATGCTACCATGTTTCTTCTCTGGTGGTCTTGATATTTTGTTTATTCACTATATTGTTGTTATAACTTTGTTTAAAAAAGTTGTTTGCATAGTTTAATCCCCTAAATGTTGAAAGAGAGAATAAGCACTGGCATGCAACCGGGTTCTTCAGGACAAAGCAAAAAGAAAAGAAACCCCTTAAATGAAAAATGATAAAGTAGAAACTTAGACCCACCACATATGAACGTGCATATGAGCTCTGGGCTCGAAGAAATTAATCCAAGCCGTTCACATTATTAAAGTTCTCACTTCTCAGCCACATGATCATTCATGTTATGTAGATTTTCTTTAAAAAAATGCTAATGATACATAAAATTAAAAGAAATATATAAAAACAAAAACAAGGAACAGCAAAAAAATATCACCTTAAAGACAACAAACAACACTGTTTCTTTCAATTTGTTTCCTAATTCCGTACAATATTTTCTTCATTTTGGACCTTTCTCAAGGCCAACTTGTTATCATGAAGTAGAAACGTGACATACATATGTTCCCAAGTGAAACCCCATTACCGTCTAATCAATGTCCTACACCACGTGCATGTCTCTTTCATTATCTTAACCTTTTAATAATCTTTGCTTAGATTAGATCTCATCATCTTAACTCCTAATTACCTTATATGTTCAATTAATATTTTGTAGATGTTGAAGCTAACAGAGCAGCTTTCTGAGGCAGAGAAGGAAATTCAACGCCTTCGAGAGCCAAATAGTAGCTCTAGTACTTCATCAATTTCACAATCCATGGAAATAGTGGACCCACAATTACTTGATGAATTTGAAGTTAATCATATATATAATGATGATGTGTTTTTCATGCCGGATGCGACATATTACTTCAACGGCCAGGAATGGATTAATCTTTATATCTAA
Protein sequence

>MS.gene89842.t1

MNHQDQMMLMSQLFPACEYTQIISQQGEKKLKPRRKRSKKNKGGENSANQILNKKRKLSDEQMKILEENFGNEHKLESEKKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYLTLKKIHESTILEKCLLETKMLKLTEQLSEAEKEIQRLREPNSSSSTSSISQSMEIVDPQLLDEFEVNHIYNDDVFFMPDATYYFNGQEWINLYI