Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91621.t1 | XP_013447570.1 | 91.3 | 127 | 11 | 0 | 1 | 127 | 1 | 127 | 1.60E-57 | 232.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91621.t1 | Q9FNR1 | 59.7 | 119 | 48 | 0 | 1 | 119 | 1 | 119 | 6.8e-36 | 151.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91621.t1 | A0A072TWR9 | 91.3 | 127 | 11 | 0 | 1 | 127 | 1 | 127 | 1.2e-57 | 232.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050277 | MS.gene91621 | 0.824055 | 9.93E-54 | -1.69E-46 |
MS.gene050916 | MS.gene91621 | 0.800261 | 1.57E-48 | -1.69E-46 |
MS.gene051748 | MS.gene91621 | 0.804241 | 2.37E-49 | -1.69E-46 |
MS.gene051903 | MS.gene91621 | 0.832471 | 9.28E-56 | -1.69E-46 |
MS.gene056631 | MS.gene91621 | 0.808558 | 2.92E-50 | -1.69E-46 |
MS.gene057094 | MS.gene91621 | 0.838827 | 2.28E-57 | -1.69E-46 |
MS.gene06001 | MS.gene91621 | 0.835519 | 1.60E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91621.t1 | MTR_7g013740 | 91.111 | 135 | 12 | 0 | 1 | 135 | 1 | 135 | 6.28e-79 | 231 |
MS.gene91621.t1 | MTR_7g013730 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 2.19e-68 | 208 |
MS.gene91621.t1 | MTR_4g109540 | 59.677 | 124 | 46 | 2 | 1 | 121 | 1 | 123 | 1.43e-47 | 155 |
MS.gene91621.t1 | MTR_3g025880 | 57.812 | 128 | 50 | 2 | 1 | 124 | 1 | 128 | 1.91e-47 | 159 |
MS.gene91621.t1 | MTR_3g014000 | 59.559 | 136 | 38 | 4 | 1 | 129 | 1 | 126 | 6.51e-47 | 149 |
MS.gene91621.t1 | MTR_4g109540 | 56.818 | 132 | 45 | 3 | 1 | 121 | 1 | 131 | 8.01e-45 | 149 |
MS.gene91621.t1 | MTR_3g084040 | 50.413 | 121 | 51 | 3 | 1 | 119 | 1 | 114 | 3.24e-35 | 120 |
MS.gene91621.t1 | MTR_3g084040 | 50.962 | 104 | 42 | 3 | 1 | 102 | 1 | 97 | 2.64e-28 | 101 |
MS.gene91621.t1 | MTR_3g080130 | 49.383 | 81 | 41 | 0 | 41 | 121 | 37 | 117 | 3.24e-25 | 94.4 |
MS.gene91621.t1 | MTR_4g070080 | 48.052 | 77 | 40 | 0 | 41 | 117 | 7 | 83 | 2.65e-23 | 89.4 |
MS.gene91621.t1 | MTR_4g070080 | 48.052 | 77 | 40 | 0 | 41 | 117 | 7 | 83 | 6.26e-23 | 89.4 |
MS.gene91621.t1 | MTR_7g099940 | 40.625 | 128 | 58 | 4 | 1 | 121 | 1 | 117 | 3.90e-22 | 86.7 |
MS.gene91621.t1 | MTR_3g075500 | 40.625 | 96 | 52 | 1 | 28 | 123 | 199 | 289 | 4.76e-21 | 87.4 |
MS.gene91621.t1 | MTR_7g105260 | 45.882 | 85 | 46 | 0 | 33 | 117 | 25 | 109 | 4.86e-21 | 84.0 |
MS.gene91621.t1 | MTR_4g070190 | 44.156 | 77 | 43 | 0 | 41 | 117 | 9 | 85 | 1.85e-20 | 83.2 |
MS.gene91621.t1 | MTR_4g070140 | 44.156 | 77 | 43 | 0 | 41 | 117 | 9 | 85 | 2.08e-20 | 83.6 |
MS.gene91621.t1 | MTR_1g064230 | 41.667 | 84 | 49 | 0 | 41 | 124 | 197 | 280 | 1.35e-19 | 83.2 |
MS.gene91621.t1 | MTR_4g104470 | 44.048 | 84 | 47 | 0 | 41 | 124 | 217 | 300 | 1.45e-19 | 83.6 |
MS.gene91621.t1 | MTR_4g104470 | 43.373 | 83 | 45 | 1 | 41 | 121 | 123 | 205 | 8.23e-12 | 62.0 |
MS.gene91621.t1 | MTR_4g081520 | 47.674 | 86 | 45 | 0 | 38 | 123 | 49 | 134 | 2.25e-19 | 79.7 |
MS.gene91621.t1 | MTR_1g045510 | 50.649 | 77 | 38 | 0 | 41 | 117 | 205 | 281 | 5.10e-19 | 81.6 |
MS.gene91621.t1 | MTR_1g045510 | 40.244 | 82 | 48 | 1 | 40 | 121 | 113 | 193 | 9.66e-14 | 67.4 |
MS.gene91621.t1 | MTR_4g063560 | 33.684 | 95 | 63 | 0 | 24 | 118 | 17 | 111 | 7.44e-18 | 74.7 |
MS.gene91621.t1 | MTR_3g029580 | 42.708 | 96 | 50 | 3 | 23 | 114 | 12 | 106 | 4.64e-17 | 73.6 |
MS.gene91621.t1 | MTR_5g044970 | 35.354 | 99 | 60 | 2 | 42 | 136 | 12 | 110 | 4.93e-16 | 71.6 |
MS.gene91621.t1 | MTR_1g092860 | 40.000 | 85 | 51 | 0 | 36 | 120 | 188 | 272 | 5.54e-16 | 73.6 |
MS.gene91621.t1 | MTR_6g477870 | 38.202 | 89 | 53 | 1 | 40 | 128 | 95 | 181 | 1.96e-15 | 70.5 |
MS.gene91621.t1 | MTR_3g055990 | 44.304 | 79 | 42 | 1 | 41 | 119 | 7 | 83 | 3.43e-15 | 72.4 |
MS.gene91621.t1 | MTR_3g055990 | 44.304 | 79 | 42 | 1 | 41 | 119 | 7 | 83 | 3.49e-15 | 72.4 |
MS.gene91621.t1 | MTR_4g081510 | 46.250 | 80 | 41 | 1 | 42 | 121 | 46 | 123 | 1.77e-14 | 67.8 |
MS.gene91621.t1 | MTR_7g118120 | 36.782 | 87 | 55 | 0 | 35 | 121 | 99 | 185 | 1.01e-13 | 68.2 |
MS.gene91621.t1 | MTR_7g106440 | 41.463 | 82 | 48 | 0 | 38 | 119 | 210 | 291 | 1.67e-13 | 67.0 |
MS.gene91621.t1 | MTR_7g106440 | 37.662 | 77 | 48 | 0 | 41 | 117 | 110 | 186 | 1.55e-11 | 61.2 |
MS.gene91621.t1 | MTR_5g097580 | 41.975 | 81 | 45 | 1 | 39 | 119 | 5 | 83 | 2.56e-13 | 67.0 |
MS.gene91621.t1 | MTR_5g097580 | 41.975 | 81 | 45 | 1 | 39 | 119 | 5 | 83 | 3.26e-13 | 66.6 |
MS.gene91621.t1 | MTR_4g124940 | 41.333 | 75 | 44 | 0 | 42 | 116 | 133 | 207 | 3.34e-13 | 66.6 |
MS.gene91621.t1 | MTR_2g026180 | 39.759 | 83 | 48 | 1 | 37 | 119 | 1 | 81 | 3.56e-13 | 66.6 |
MS.gene91621.t1 | MTR_3g029580 | 42.424 | 66 | 38 | 0 | 39 | 104 | 31 | 96 | 6.00e-13 | 62.8 |
MS.gene91621.t1 | MTR_3g092490 | 30.159 | 126 | 86 | 2 | 23 | 147 | 9 | 133 | 6.22e-13 | 63.5 |
MS.gene91621.t1 | MTR_1g036430 | 39.423 | 104 | 58 | 4 | 21 | 124 | 144 | 242 | 7.49e-13 | 65.5 |
MS.gene91621.t1 | MTR_8g022050 | 40.000 | 75 | 45 | 0 | 42 | 116 | 149 | 223 | 8.68e-13 | 65.5 |
MS.gene91621.t1 | MTR_3g109090 | 40.789 | 76 | 45 | 0 | 41 | 116 | 146 | 221 | 1.16e-12 | 65.1 |
MS.gene91621.t1 | MTR_3g109090 | 40.789 | 76 | 45 | 0 | 41 | 116 | 130 | 205 | 1.17e-12 | 65.1 |
MS.gene91621.t1 | MTR_4g117350 | 33.750 | 80 | 53 | 0 | 38 | 117 | 69 | 148 | 1.65e-12 | 62.0 |
MS.gene91621.t1 | MTR_3g116130 | 34.821 | 112 | 57 | 3 | 31 | 126 | 16 | 127 | 1.67e-12 | 63.9 |
MS.gene91621.t1 | MTR_4g074930 | 39.640 | 111 | 59 | 3 | 34 | 144 | 358 | 460 | 1.77e-12 | 64.7 |
MS.gene91621.t1 | MTR_4g074930 | 39.640 | 111 | 59 | 3 | 34 | 144 | 370 | 472 | 1.94e-12 | 64.3 |
MS.gene91621.t1 | MTR_3g075500 | 37.333 | 75 | 42 | 1 | 28 | 102 | 199 | 268 | 1.97e-12 | 63.5 |
MS.gene91621.t1 | MTR_4g074930 | 39.640 | 111 | 59 | 3 | 34 | 144 | 323 | 425 | 2.29e-12 | 64.3 |
MS.gene91621.t1 | MTR_4g074930 | 39.640 | 111 | 59 | 3 | 34 | 144 | 335 | 437 | 2.42e-12 | 63.9 |
MS.gene91621.t1 | MTR_3g092490 | 32.692 | 104 | 69 | 1 | 23 | 126 | 9 | 111 | 2.74e-12 | 63.2 |
MS.gene91621.t1 | MTR_6g477870 | 38.710 | 62 | 38 | 0 | 40 | 101 | 95 | 156 | 2.79e-12 | 61.6 |
MS.gene91621.t1 | MTR_3g092490 | 32.692 | 104 | 69 | 1 | 23 | 126 | 9 | 111 | 2.85e-12 | 62.8 |
MS.gene91621.t1 | MTR_3g116130 | 35.965 | 114 | 60 | 3 | 40 | 141 | 29 | 141 | 3.04e-12 | 63.5 |
MS.gene91621.t1 | MTR_1g056520 | 37.975 | 79 | 49 | 0 | 38 | 116 | 205 | 283 | 5.80e-12 | 62.8 |
MS.gene91621.t1 | MTR_1g097280 | 34.444 | 90 | 59 | 0 | 28 | 117 | 17 | 106 | 5.96e-12 | 63.2 |
MS.gene91621.t1 | MTR_1g061870 | 41.026 | 78 | 45 | 1 | 42 | 119 | 295 | 371 | 1.10e-11 | 62.0 |
MS.gene91621.t1 | MTR_7g117495 | 38.961 | 77 | 46 | 1 | 40 | 116 | 18 | 93 | 1.27e-11 | 61.2 |
MS.gene91621.t1 | MTR_7g117495 | 43.333 | 60 | 34 | 0 | 40 | 99 | 18 | 77 | 1.55e-11 | 60.8 |
MS.gene91621.t1 | MTR_8g024520 | 41.558 | 77 | 44 | 1 | 40 | 116 | 25 | 100 | 1.65e-11 | 61.2 |
MS.gene91621.t1 | MTR_8g024520 | 41.558 | 77 | 44 | 1 | 40 | 116 | 25 | 100 | 1.67e-11 | 61.2 |
MS.gene91621.t1 | MTR_6g004810 | 32.174 | 115 | 75 | 3 | 7 | 119 | 99 | 212 | 1.83e-11 | 61.2 |
MS.gene91621.t1 | MTR_2g096560 | 33.750 | 80 | 53 | 0 | 40 | 119 | 7 | 86 | 1.90e-11 | 57.4 |
MS.gene91621.t1 | MTR_7g094660 | 36.709 | 79 | 50 | 0 | 41 | 119 | 330 | 408 | 3.35e-11 | 60.8 |
MS.gene91621.t1 | MTR_8g092550 | 35.644 | 101 | 60 | 3 | 41 | 137 | 304 | 403 | 3.79e-11 | 60.5 |
MS.gene91621.t1 | MTR_6g040070 | 41.250 | 80 | 46 | 1 | 40 | 119 | 209 | 287 | 6.85e-11 | 60.1 |
MS.gene91621.t1 | MTR_3g103420 | 37.374 | 99 | 60 | 1 | 40 | 138 | 10 | 106 | 7.07e-11 | 59.7 |
MS.gene91621.t1 | MTR_7g104800 | 37.805 | 82 | 48 | 1 | 40 | 121 | 101 | 179 | 7.40e-11 | 59.7 |
MS.gene91621.t1 | MTR_7g107580 | 35.443 | 79 | 51 | 0 | 40 | 118 | 348 | 426 | 8.23e-11 | 59.7 |
MS.gene91621.t1 | MTR_4g035310 | 34.737 | 95 | 52 | 3 | 41 | 128 | 17 | 108 | 8.28e-11 | 58.9 |
MS.gene91621.t1 | MTR_3g095230 | 42.667 | 75 | 41 | 2 | 41 | 114 | 318 | 391 | 8.45e-11 | 59.7 |
MS.gene91621.t1 | MTR_7g107580 | 35.443 | 79 | 51 | 0 | 40 | 118 | 349 | 427 | 8.81e-11 | 59.7 |
MS.gene91621.t1 | MTR_3g095230 | 42.667 | 75 | 41 | 2 | 41 | 114 | 318 | 391 | 9.45e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91621.t1 | AT5G61030 | 59.664 | 119 | 48 | 0 | 1 | 119 | 1 | 119 | 2.11e-49 | 161 |
MS.gene91621.t1 | AT5G61030 | 59.664 | 119 | 48 | 0 | 1 | 119 | 1 | 119 | 2.11e-49 | 161 |
MS.gene91621.t1 | AT1G74230 | 56.780 | 118 | 44 | 3 | 1 | 118 | 1 | 111 | 2.18e-40 | 137 |
MS.gene91621.t1 | AT4G13850 | 49.167 | 120 | 56 | 2 | 1 | 120 | 1 | 115 | 5.91e-33 | 114 |
MS.gene91621.t1 | AT4G13850 | 49.167 | 120 | 56 | 2 | 1 | 120 | 1 | 115 | 1.24e-32 | 114 |
MS.gene91621.t1 | AT4G13850 | 49.167 | 120 | 56 | 2 | 1 | 120 | 1 | 115 | 1.43e-32 | 114 |
MS.gene91621.t1 | AT4G13850 | 46.575 | 146 | 65 | 3 | 1 | 146 | 1 | 133 | 5.78e-28 | 101 |
MS.gene91621.t1 | AT3G23830 | 43.333 | 150 | 60 | 4 | 1 | 147 | 1 | 128 | 4.37e-26 | 96.7 |
MS.gene91621.t1 | AT3G23830 | 43.333 | 150 | 60 | 4 | 1 | 147 | 1 | 128 | 4.37e-26 | 96.7 |
MS.gene91621.t1 | AT4G39260 | 45.570 | 79 | 43 | 0 | 41 | 119 | 7 | 85 | 1.24e-22 | 86.7 |
MS.gene91621.t1 | AT1G18630 | 51.852 | 81 | 39 | 0 | 36 | 116 | 32 | 112 | 1.78e-22 | 88.2 |
MS.gene91621.t1 | AT5G59865 | 47.573 | 103 | 52 | 2 | 24 | 126 | 11 | 111 | 2.10e-22 | 86.7 |
MS.gene91621.t1 | AT5G06210 | 45.679 | 81 | 44 | 0 | 39 | 119 | 33 | 113 | 2.74e-22 | 87.4 |
MS.gene91621.t1 | AT2G37220 | 50.000 | 80 | 40 | 0 | 41 | 120 | 205 | 284 | 1.11e-21 | 89.0 |
MS.gene91621.t1 | AT2G37220 | 40.449 | 89 | 51 | 1 | 41 | 127 | 92 | 180 | 1.50e-11 | 61.2 |
MS.gene91621.t1 | AT2G21660 | 46.753 | 77 | 41 | 0 | 41 | 117 | 9 | 85 | 1.89e-21 | 85.5 |
MS.gene91621.t1 | AT2G21660 | 46.753 | 77 | 41 | 0 | 41 | 117 | 9 | 85 | 2.83e-21 | 85.5 |
MS.gene91621.t1 | AT4G24770 | 48.235 | 85 | 43 | 1 | 41 | 124 | 245 | 329 | 3.48e-21 | 88.2 |
MS.gene91621.t1 | AT4G24770 | 41.250 | 80 | 47 | 0 | 40 | 119 | 150 | 229 | 8.02e-12 | 62.4 |
MS.gene91621.t1 | AT4G24770 | 48.235 | 85 | 43 | 1 | 41 | 124 | 245 | 329 | 3.48e-21 | 88.2 |
MS.gene91621.t1 | AT4G24770 | 41.250 | 80 | 47 | 0 | 40 | 119 | 150 | 229 | 8.02e-12 | 62.4 |
MS.gene91621.t1 | AT4G39260 | 45.455 | 77 | 42 | 0 | 41 | 117 | 7 | 83 | 5.12e-21 | 83.6 |
MS.gene91621.t1 | AT3G08000 | 50.602 | 83 | 41 | 0 | 41 | 123 | 42 | 124 | 6.52e-21 | 83.6 |
MS.gene91621.t1 | AT3G53460 | 49.398 | 83 | 42 | 0 | 41 | 123 | 258 | 340 | 7.69e-21 | 87.4 |
MS.gene91621.t1 | AT3G53460 | 49.398 | 83 | 42 | 0 | 41 | 123 | 258 | 340 | 7.69e-21 | 87.4 |
MS.gene91621.t1 | AT3G53460 | 49.398 | 83 | 42 | 0 | 41 | 123 | 258 | 340 | 7.69e-21 | 87.4 |
MS.gene91621.t1 | AT3G53460 | 49.398 | 83 | 42 | 0 | 41 | 123 | 279 | 361 | 9.81e-21 | 87.4 |
MS.gene91621.t1 | AT4G39260 | 45.455 | 77 | 42 | 0 | 41 | 117 | 7 | 83 | 1.48e-20 | 83.6 |
MS.gene91621.t1 | AT2G37510 | 41.509 | 106 | 53 | 1 | 36 | 132 | 30 | 135 | 3.06e-19 | 79.3 |
MS.gene91621.t1 | AT5G50250 | 45.679 | 81 | 44 | 0 | 41 | 121 | 208 | 288 | 1.27e-18 | 80.9 |
MS.gene91621.t1 | AT5G50250 | 42.500 | 80 | 46 | 0 | 40 | 119 | 113 | 192 | 2.02e-12 | 63.9 |
MS.gene91621.t1 | AT5G47320 | 44.318 | 88 | 48 | 1 | 33 | 120 | 25 | 111 | 1.34e-18 | 79.3 |
MS.gene91621.t1 | AT4G13860 | 50.667 | 75 | 37 | 0 | 39 | 113 | 2 | 76 | 2.94e-18 | 75.1 |
MS.gene91621.t1 | AT3G46020 | 41.758 | 91 | 51 | 1 | 39 | 127 | 6 | 96 | 4.65e-18 | 75.1 |
MS.gene91621.t1 | AT3G26420 | 40.426 | 94 | 54 | 1 | 41 | 134 | 8 | 99 | 1.56e-17 | 77.0 |
MS.gene91621.t1 | AT2G27330 | 40.909 | 88 | 49 | 2 | 27 | 114 | 11 | 95 | 6.96e-16 | 69.7 |
MS.gene91621.t1 | AT1G13690 | 35.354 | 99 | 60 | 2 | 42 | 136 | 15 | 113 | 8.15e-16 | 71.2 |
MS.gene91621.t1 | AT5G54580 | 45.238 | 84 | 46 | 0 | 39 | 122 | 55 | 138 | 4.63e-15 | 68.9 |
MS.gene91621.t1 | AT1G60000 | 45.455 | 77 | 42 | 0 | 41 | 117 | 178 | 254 | 4.80e-15 | 70.5 |
MS.gene91621.t1 | AT4G39260 | 41.935 | 62 | 36 | 0 | 41 | 102 | 7 | 68 | 7.92e-15 | 67.0 |
MS.gene91621.t1 | AT2G46780 | 41.573 | 89 | 48 | 2 | 40 | 125 | 22 | 109 | 1.56e-14 | 70.1 |
MS.gene91621.t1 | AT2G46780 | 41.573 | 89 | 48 | 2 | 40 | 125 | 22 | 109 | 1.56e-14 | 70.1 |
MS.gene91621.t1 | AT3G20930 | 34.737 | 95 | 61 | 1 | 37 | 130 | 279 | 373 | 1.86e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.16e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.16e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.16e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.16e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.16e-14 | 70.1 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.43e-14 | 69.7 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.43e-14 | 69.7 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.43e-14 | 69.7 |
MS.gene91621.t1 | AT5G55550 | 43.038 | 79 | 43 | 1 | 41 | 119 | 7 | 83 | 2.43e-14 | 69.7 |
MS.gene91621.t1 | AT3G14100 | 40.000 | 75 | 45 | 0 | 42 | 116 | 146 | 220 | 3.29e-14 | 69.3 |
MS.gene91621.t1 | AT4G13860 | 54.237 | 59 | 27 | 0 | 56 | 114 | 2 | 60 | 4.29e-14 | 63.9 |
MS.gene91621.t1 | AT1G73530 | 38.750 | 80 | 49 | 0 | 40 | 119 | 77 | 156 | 5.73e-14 | 66.6 |
MS.gene91621.t1 | AT4G26650 | 41.772 | 79 | 44 | 1 | 41 | 119 | 13 | 89 | 7.18e-14 | 68.6 |
MS.gene91621.t1 | AT3G52380 | 40.964 | 83 | 48 | 1 | 41 | 123 | 117 | 198 | 7.26e-14 | 68.2 |
MS.gene91621.t1 | AT3G52380 | 38.636 | 88 | 54 | 0 | 38 | 125 | 217 | 304 | 8.35e-13 | 65.1 |
MS.gene91621.t1 | AT4G26650 | 41.772 | 79 | 44 | 1 | 41 | 119 | 16 | 92 | 7.41e-14 | 68.6 |
MS.gene91621.t1 | AT1G54080 | 36.264 | 91 | 51 | 1 | 42 | 132 | 150 | 233 | 8.63e-14 | 68.2 |
MS.gene91621.t1 | AT2G37510 | 33.588 | 131 | 53 | 2 | 36 | 132 | 30 | 160 | 9.22e-14 | 65.5 |
MS.gene91621.t1 | AT5G55550 | 45.070 | 71 | 37 | 1 | 41 | 111 | 7 | 75 | 1.22e-13 | 67.8 |
MS.gene91621.t1 | AT5G55550 | 45.070 | 71 | 37 | 1 | 41 | 111 | 7 | 75 | 1.33e-13 | 67.8 |
MS.gene91621.t1 | AT1G22330 | 40.777 | 103 | 58 | 3 | 40 | 140 | 17 | 118 | 2.20e-13 | 66.6 |
MS.gene91621.t1 | AT5G04280 | 33.000 | 100 | 65 | 1 | 40 | 137 | 7 | 106 | 2.52e-13 | 66.6 |
MS.gene91621.t1 | AT1G76460 | 42.857 | 84 | 46 | 2 | 40 | 122 | 24 | 106 | 2.73e-13 | 66.2 |
MS.gene91621.t1 | AT3G07810 | 37.975 | 79 | 47 | 1 | 41 | 119 | 7 | 83 | 2.90e-13 | 66.6 |
MS.gene91621.t1 | AT3G07810 | 37.975 | 79 | 47 | 1 | 41 | 119 | 7 | 83 | 3.26e-13 | 66.6 |
MS.gene91621.t1 | AT1G33470 | 48.276 | 58 | 30 | 0 | 41 | 98 | 8 | 65 | 7.85e-13 | 64.3 |
MS.gene91621.t1 | AT1G33470 | 48.276 | 58 | 30 | 0 | 41 | 98 | 8 | 65 | 8.36e-13 | 64.3 |
MS.gene91621.t1 | AT1G33470 | 48.276 | 58 | 30 | 0 | 41 | 98 | 8 | 65 | 8.53e-13 | 64.3 |
MS.gene91621.t1 | AT5G59860 | 43.243 | 74 | 37 | 1 | 45 | 118 | 76 | 144 | 9.24e-13 | 62.8 |
MS.gene91621.t1 | AT1G60650 | 32.692 | 104 | 68 | 1 | 39 | 142 | 11 | 112 | 2.08e-12 | 63.9 |
MS.gene91621.t1 | AT1G60650 | 32.692 | 104 | 68 | 1 | 39 | 142 | 11 | 112 | 2.08e-12 | 63.9 |
MS.gene91621.t1 | AT3G20930 | 33.000 | 100 | 61 | 2 | 37 | 130 | 279 | 378 | 2.96e-12 | 63.5 |
MS.gene91621.t1 | AT4G14300 | 41.860 | 86 | 48 | 1 | 41 | 126 | 7 | 90 | 3.38e-12 | 63.5 |
MS.gene91621.t1 | AT4G14300 | 41.860 | 86 | 48 | 1 | 41 | 126 | 7 | 90 | 3.38e-12 | 63.5 |
MS.gene91621.t1 | AT1G22910 | 36.842 | 95 | 52 | 3 | 40 | 128 | 13 | 105 | 3.90e-12 | 62.4 |
MS.gene91621.t1 | AT1G22910 | 36.842 | 95 | 52 | 3 | 40 | 128 | 13 | 105 | 4.43e-12 | 62.4 |
MS.gene91621.t1 | AT1G17370 | 38.667 | 75 | 46 | 0 | 42 | 116 | 141 | 215 | 5.19e-12 | 63.2 |
MS.gene91621.t1 | AT1G17370 | 38.667 | 75 | 46 | 0 | 42 | 116 | 141 | 215 | 5.46e-12 | 63.2 |
MS.gene91621.t1 | AT5G47620 | 45.161 | 62 | 34 | 0 | 37 | 98 | 3 | 64 | 6.89e-12 | 62.8 |
MS.gene91621.t1 | AT5G47620 | 45.161 | 62 | 34 | 0 | 37 | 98 | 3 | 64 | 6.89e-12 | 62.8 |
MS.gene91621.t1 | AT5G47620 | 45.161 | 62 | 34 | 0 | 37 | 98 | 3 | 64 | 6.89e-12 | 62.8 |
MS.gene91621.t1 | AT5G47620 | 45.161 | 62 | 34 | 0 | 37 | 98 | 3 | 64 | 8.09e-12 | 62.4 |
MS.gene91621.t1 | AT1G49760 | 38.889 | 90 | 55 | 0 | 39 | 128 | 44 | 133 | 8.18e-12 | 62.8 |
MS.gene91621.t1 | AT1G49760 | 38.889 | 90 | 55 | 0 | 39 | 128 | 44 | 133 | 8.18e-12 | 62.8 |
MS.gene91621.t1 | AT5G11412 | 38.961 | 77 | 46 | 1 | 40 | 116 | 52 | 127 | 9.54e-12 | 60.5 |
MS.gene91621.t1 | AT1G54080 | 34.343 | 99 | 54 | 2 | 38 | 132 | 146 | 237 | 9.73e-12 | 62.4 |
MS.gene91621.t1 | AT2G33410 | 39.241 | 79 | 46 | 1 | 41 | 119 | 7 | 83 | 1.00e-11 | 62.4 |
MS.gene91621.t1 | AT2G19380 | 33.721 | 86 | 56 | 1 | 35 | 120 | 403 | 487 | 1.07e-11 | 62.4 |
MS.gene91621.t1 | AT1G20880 | 38.202 | 89 | 51 | 2 | 40 | 125 | 24 | 111 | 1.19e-11 | 61.6 |
MS.gene91621.t1 | AT1G20880 | 38.202 | 89 | 51 | 2 | 40 | 125 | 24 | 111 | 1.19e-11 | 61.6 |
MS.gene91621.t1 | AT1G20880 | 38.202 | 89 | 51 | 2 | 40 | 125 | 24 | 111 | 1.19e-11 | 61.6 |
MS.gene91621.t1 | AT1G22910 | 36.842 | 95 | 52 | 3 | 40 | 128 | 13 | 105 | 1.29e-11 | 62.0 |
MS.gene91621.t1 | AT4G34110 | 40.741 | 81 | 47 | 1 | 39 | 119 | 317 | 396 | 1.52e-11 | 62.0 |
MS.gene91621.t1 | AT4G34110 | 35.632 | 87 | 56 | 0 | 42 | 128 | 38 | 124 | 6.86e-11 | 60.1 |
MS.gene91621.t1 | AT2G21690 | 35.211 | 71 | 46 | 0 | 43 | 113 | 10 | 80 | 1.78e-11 | 58.5 |
MS.gene91621.t1 | AT1G78260 | 38.961 | 77 | 46 | 1 | 40 | 116 | 17 | 92 | 2.01e-11 | 60.8 |
MS.gene91621.t1 | AT1G78260 | 38.961 | 77 | 46 | 1 | 40 | 116 | 17 | 92 | 2.07e-11 | 60.8 |
MS.gene91621.t1 | AT1G71800 | 39.474 | 76 | 46 | 0 | 42 | 117 | 11 | 86 | 2.14e-11 | 61.2 |
MS.gene91621.t1 | AT1G48920 | 37.143 | 105 | 64 | 2 | 39 | 143 | 296 | 398 | 2.22e-11 | 61.2 |
MS.gene91621.t1 | AT5G51300 | 40.659 | 91 | 53 | 1 | 26 | 116 | 467 | 556 | 3.65e-11 | 60.8 |
MS.gene91621.t1 | AT5G51300 | 40.659 | 91 | 53 | 1 | 26 | 116 | 467 | 556 | 3.65e-11 | 60.8 |
MS.gene91621.t1 | AT5G51300 | 40.659 | 91 | 53 | 1 | 26 | 116 | 467 | 556 | 3.65e-11 | 60.8 |
MS.gene91621.t1 | AT3G16380 | 38.095 | 84 | 51 | 1 | 36 | 119 | 300 | 382 | 6.64e-11 | 60.1 |
MS.gene91621.t1 | AT5G53680 | 37.662 | 77 | 47 | 1 | 40 | 116 | 13 | 88 | 8.98e-11 | 57.8 |
MS.gene91621.t1 | AT2G36660 | 35.000 | 80 | 51 | 1 | 40 | 119 | 304 | 382 | 9.53e-11 | 59.7 |
Find 62 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGGCGTTCTTTGGTAAAA+TGG | 0.181499 | 7.4:+85386800 | None:intergenic |
GGAAGCATCTTCTGCCCTTC+AGG | 0.322496 | 7.4:+85387920 | MS.gene91621:CDS |
GGCTATGGTGGAGGCGGTGG+TGG | 0.323254 | 7.4:+85388537 | MS.gene91621:CDS |
GGCGGTGGTGGCGGCGGTGG+TGG | 0.324129 | 7.4:+85388549 | MS.gene91621:CDS |
GGCGGCGGTGGTGGCGGCGG+TGG | 0.328176 | 7.4:+85388513 | MS.gene91621:CDS |
GTTTGAGCAATGGCGTTCTT+TGG | 0.330058 | 7.4:+85386792 | None:intergenic |
CAAGGCAGGTCCAAAGGATT+TGG | 0.333728 | 7.4:+85387873 | MS.gene91621:CDS |
GGCGGTGGTGGCGGCGGTGG+TGG | 0.336421 | 7.4:+85388516 | MS.gene91621:CDS |
GGCTATAGTGGCGGCGGTGG+TGG | 0.341836 | 7.4:+85388504 | MS.gene91621:CDS |
GGTGGAGGCGGTGGTGGCGG+CGG | 0.353136 | 7.4:+85388543 | MS.gene91621:CDS |
GGAGGCGGTGGTGGCGGCGG+TGG | 0.353642 | 7.4:+85388546 | MS.gene91621:CDS |
TTTATCTATGTCTACTCCTT+TGG | 0.355801 | 7.4:+85386866 | MS.gene91621:CDS |
GGGTACAGTGGTGGTGGCTT+TGG | 0.356153 | 7.4:+85388468 | MS.gene91621:CDS |
GGTGGCTATGGTGGAGGCGG+TGG | 0.369552 | 7.4:+85388534 | MS.gene91621:CDS |
TATGGTGGAGGCGGTGGTGG+CGG | 0.383584 | 7.4:+85388540 | MS.gene91621:CDS |
GCTCAAGAAAGGCCACGTTC+TGG | 0.386735 | 7.4:+85388447 | MS.gene91621:CDS |
AGTTACAAAGCCAAATCCTT+TGG | 0.399671 | 7.4:-85387883 | None:intergenic |
GGCGGCGGTGGTGGCTATGG+TGG | 0.400748 | 7.4:+85388525 | MS.gene91621:CDS |
GGCGGCGGTGGTGGCTATGG+TGG | 0.400748 | 7.4:+85388558 | MS.gene91621:CDS |
CTTTGGACCTGCCTTGTTCA+CGG | 0.409016 | 7.4:-85387866 | None:intergenic |
GGTGGTGGCTTTGGCGGCGA+TGG | 0.409602 | 7.4:+85388477 | MS.gene91621:CDS |
AGTGGCGGCGGTGGTGGCGG+CGG | 0.416076 | 7.4:+85388510 | MS.gene91621:CDS |
TATAGTGGCGGCGGTGGTGG+CGG | 0.426517 | 7.4:+85388507 | MS.gene91621:CDS |
CATAGGGAGCAAAACTTTCT+CGG | 0.428202 | 7.4:-85387042 | None:intergenic |
GGCGGTGGTGGCTATGGTGG+AGG | 0.431253 | 7.4:+85388528 | MS.gene91621:CDS |
GGCGGTGGTGGCTATGGTGG+AGG | 0.431253 | 7.4:+85388561 | MS.gene91621:CDS |
GGCTTTGGCGGCGATGGTGG+TGG | 0.433850 | 7.4:+85388483 | MS.gene91621:CDS |
CTCAAGAAAGGCCACGTTCT+GGG | 0.434456 | 7.4:+85388448 | MS.gene91621:CDS |
TACAGTGGTGGTGGCTTTGG+CGG | 0.434480 | 7.4:+85388471 | MS.gene91621:CDS |
GGCGATGGTGGTGGCTATAG+TGG | 0.434840 | 7.4:+85388492 | MS.gene91621:CDS |
GGTGGCGGCGGTGGTGGCTA+TGG | 0.435179 | 7.4:+85388522 | MS.gene91621:CDS |
GGTGGCGGCGGTGGTGGCTA+TGG | 0.435179 | 7.4:+85388555 | MS.gene91621:CDS |
ATGGCGTTCTTTGGTAAAAT+GGG | 0.448549 | 7.4:+85386801 | MS.gene91621:CDS |
GGTGGCTATAGTGGCGGCGG+TGG | 0.457503 | 7.4:+85388501 | MS.gene91621:CDS |
ATGTTGTAACAGGAACTTCA+TGG | 0.461718 | 7.4:+85388402 | MS.gene91621:intron |
ATGACATGGATCTAATTGAT+TGG | 0.464090 | 7.4:-85386893 | None:intergenic |
GGTGGCTTTGGCGGCGATGG+TGG | 0.476723 | 7.4:+85388480 | MS.gene91621:CDS |
TCTGCAAAGCTTTATGTTGG+AGG | 0.496801 | 7.4:+85386915 | MS.gene91621:CDS |
GGTGGTGGCTATGGTGGAGG+CGG | 0.499483 | 7.4:+85388531 | MS.gene91621:CDS |
ATCTTCTGCCCTTCAGGCCA+TGG | 0.501939 | 7.4:+85387926 | MS.gene91621:CDS |
CCTTGTTATCCATGGCCTGA+AGG | 0.507202 | 7.4:-85387935 | None:intergenic |
TCATCTGCAAAGCTTTATGT+TGG | 0.509557 | 7.4:+85386912 | MS.gene91621:CDS |
CCCTATGGAGAAGTTGTTGA+TGG | 0.511355 | 7.4:+85387058 | MS.gene91621:CDS |
CGTTCTGGGTACAGTGGTGG+TGG | 0.523451 | 7.4:+85388462 | MS.gene91621:CDS |
CTTGTTATCCATGGCCTGAA+GGG | 0.523916 | 7.4:-85387934 | None:intergenic |
GGTGGTGGCTATGGTGGAGG+CGG | 0.542334 | 7.4:+85388564 | MS.gene91621:CDS |
TGATAATACCTTGTTATCCA+TGG | 0.548529 | 7.4:-85387943 | None:intergenic |
ACCATCAACAACTTCTCCAT+AGG | 0.559308 | 7.4:-85387059 | None:intergenic |
TCATCGACCGTGAACAAGGC+AGG | 0.562492 | 7.4:+85387859 | MS.gene91621:CDS |
CCTTCAGGCCATGGATAACA+AGG | 0.562607 | 7.4:+85387935 | MS.gene91621:CDS |
GTTATCATCGACCGTGAACA+AGG | 0.569596 | 7.4:+85387855 | MS.gene91621:CDS |
CGTGAACAAGGCAGGTCCAA+AGG | 0.574639 | 7.4:+85387867 | MS.gene91621:CDS |
CCATCAACAACTTCTCCATA+GGG | 0.583632 | 7.4:-85387058 | None:intergenic |
ATAAAGCTTTGCAGATGACA+TGG | 0.587694 | 7.4:-85386907 | None:intergenic |
GAGTGAACTATGCTCAAGAA+AGG | 0.590889 | 7.4:+85388436 | MS.gene91621:CDS |
GGTGGTGGCTATAGTGGCGG+CGG | 0.599616 | 7.4:+85388498 | MS.gene91621:CDS |
CTAATTGATTGGAATGCCAA+AGG | 0.608642 | 7.4:-85386882 | None:intergenic |
CCACGTTCTGGGTACAGTGG+TGG | 0.613795 | 7.4:+85388459 | MS.gene91621:CDS |
CCACCACTGTACCCAGAACG+TGG | 0.624550 | 7.4:-85388459 | None:intergenic |
AGGCCACGTTCTGGGTACAG+TGG | 0.652408 | 7.4:+85388456 | MS.gene91621:CDS |
GATGGTGGTGGCTATAGTGG+CGG | 0.667344 | 7.4:+85388495 | MS.gene91621:CDS |
TGTAACAGGAACTTCATGGT+CGG | 0.684162 | 7.4:+85388406 | MS.gene91621:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCTATTTAATTTTAAAGAA+AGG | + | chr7.4:85387489-85387508 | MS.gene91621:intron | 10.0% |
!! | ATACAAGTATAAATATTAGT+TGG | - | chr7.4:85388226-85388245 | None:intergenic | 15.0% |
!! | TTATATATGATTTGATAGAT+TGG | + | chr7.4:85387688-85387707 | MS.gene91621:intron | 15.0% |
!!! | ATTTTTTGCATTCATTATAA+TGG | - | chr7.4:85388134-85388153 | None:intergenic | 15.0% |
!!! | TAATTACGATTTCAAATTTT+TGG | - | chr7.4:85387422-85387441 | None:intergenic | 15.0% |
!! | AAAAAATATAACGATGACTT+GGG | + | chr7.4:85388147-85388166 | MS.gene91621:intron | 20.0% |
!! | AATAATGCACATAATATTGT+AGG | + | chr7.4:85388170-85388189 | MS.gene91621:intron | 20.0% |
!! | CAAAAAGCCTATATAATTAA+AGG | - | chr7.4:85387221-85387240 | None:intergenic | 20.0% |
!! | TAAAATCACTCAAAAAAAGT+GGG | + | chr7.4:85387611-85387630 | MS.gene91621:intron | 20.0% |
!! | TGATGTTCCTTTAATTATAT+AGG | + | chr7.4:85387211-85387230 | MS.gene91621:intron | 20.0% |
!! | TGTTTATTTGACACAAATTA+AGG | + | chr7.4:85388038-85388057 | MS.gene91621:intron | 20.0% |
!!! | AATGTCGATACATTTTTATA+AGG | + | chr7.4:85388263-85388282 | MS.gene91621:intron | 20.0% |
!!! | ATAATTTTCATTGAAAGTCA+AGG | + | chr7.4:85387731-85387750 | MS.gene91621:intron | 20.0% |
!!! | ATCTAAAATTATGTTGTAAC+AGG | + | chr7.4:85388392-85388411 | MS.gene91621:intron | 20.0% |
!!! | TTCAAATTTTTGGTGTTTTT+TGG | - | chr7.4:85387412-85387431 | None:intergenic | 20.0% |
! | AAAATCACTCAAAAAAAGTG+GGG | + | chr7.4:85387612-85387631 | MS.gene91621:intron | 25.0% |
! | AACAATCGCTCAAAAAATAA+TGG | - | chr7.4:85387279-85387298 | None:intergenic | 25.0% |
! | ACAATCGCTCAAAAAATAAT+GGG | - | chr7.4:85387278-85387297 | None:intergenic | 25.0% |
! | ATTTAGAGAGAATTTACAAG+CGG | - | chr7.4:85387162-85387181 | None:intergenic | 25.0% |
! | CAAAAAATATAACGATGACT+TGG | + | chr7.4:85388146-85388165 | MS.gene91621:intron | 25.0% |
! | CTAAAATCACTCAAAAAAAG+TGG | + | chr7.4:85387610-85387629 | MS.gene91621:intron | 25.0% |
! | TACTAGTTATTCATCATTTC+AGG | + | chr7.4:85387107-85387126 | MS.gene91621:intron | 25.0% |
! | TATTAGTGAAAGAAAGAGAA+TGG | + | chr7.4:85388067-85388086 | MS.gene91621:intron | 25.0% |
AAACAGCAACAATTAGTTGA+TGG | - | chr7.4:85388308-85388327 | None:intergenic | 30.0% | |
AAATCACTCAAAAAAAGTGG+GGG | + | chr7.4:85387613-85387632 | MS.gene91621:intron | 30.0% | |
ACAAGTATGCCAATTGTTAT+AGG | - | chr7.4:85388021-85388040 | None:intergenic | 30.0% | |
AGCATATGCATTTCATAACA+TGG | + | chr7.4:85387779-85387798 | MS.gene91621:intron | 30.0% | |
AGGACTAGAAAATCACAATA+GGG | + | chr7.4:85387573-85387592 | MS.gene91621:intron | 30.0% | |
ATCATGTTGAATTGTCTGAA+TGG | + | chr7.4:85386949-85386968 | MS.gene91621:intron | 30.0% | |
ATGACATGGATCTAATTGAT+TGG | - | chr7.4:85386896-85386915 | None:intergenic | 30.0% | |
ATGCACATAATATTGTAGGA+TGG | + | chr7.4:85388174-85388193 | MS.gene91621:intron | 30.0% | |
CATATGCATTTCATAACATG+GGG | + | chr7.4:85387781-85387800 | MS.gene91621:intron | 30.0% | |
CTTTGCAAAACTCAAAATGT+TGG | + | chr7.4:85388353-85388372 | MS.gene91621:intron | 30.0% | |
GATTGTTACCCTTTATGATT+TGG | + | chr7.4:85387292-85387311 | MS.gene91621:intron | 30.0% | |
GCATATGCATTTCATAACAT+GGG | + | chr7.4:85387780-85387799 | MS.gene91621:intron | 30.0% | |
GGGATATACCAAATCATAAA+GGG | - | chr7.4:85387303-85387322 | None:intergenic | 30.0% | |
TGGGATATACCAAATCATAA+AGG | - | chr7.4:85387304-85387323 | None:intergenic | 30.0% | |
TTTATCTATGTCTACTCCTT+TGG | + | chr7.4:85386866-85386885 | MS.gene91621:CDS | 30.0% | |
! | TGATAATACCTTGTTATCCA+TGG | - | chr7.4:85387946-85387965 | None:intergenic | 30.0% |
! | TTATTCATCATTTCAGGTAG+AGG | + | chr7.4:85387113-85387132 | MS.gene91621:intron | 30.0% |
!! | AATTTTAAAGAAAGGCATGC+TGG | + | chr7.4:85387497-85387516 | MS.gene91621:intron | 30.0% |
ACAATAGGGGAAAACATAAG+GGG | + | chr7.4:85387587-85387606 | MS.gene91621:intron | 35.0% | |
AGTTACAAAGCCAAATCCTT+TGG | - | chr7.4:85387886-85387905 | None:intergenic | 35.0% | |
ATAAAGCTTTGCAGATGACA+TGG | - | chr7.4:85386910-85386929 | None:intergenic | 35.0% | |
ATGGCGTTCTTTGGTAAAAT+GGG | + | chr7.4:85386801-85386820 | MS.gene91621:CDS | 35.0% | |
ATGTTGTAACAGGAACTTCA+TGG | + | chr7.4:85388402-85388421 | MS.gene91621:intron | 35.0% | |
CACAATAGGGGAAAACATAA+GGG | + | chr7.4:85387586-85387605 | MS.gene91621:intron | 35.0% | |
CTAATTGATTGGAATGCCAA+AGG | - | chr7.4:85386885-85386904 | None:intergenic | 35.0% | |
GAGGACTAGAAAATCACAAT+AGG | + | chr7.4:85387572-85387591 | MS.gene91621:intron | 35.0% | |
GATGCCTTCTATCGAAAATT+TGG | + | chr7.4:85387550-85387569 | MS.gene91621:intron | 35.0% | |
GGACTAGAAAATCACAATAG+GGG | + | chr7.4:85387574-85387593 | MS.gene91621:intron | 35.0% | |
TCAAGGTCACACAAAATTGA+TGG | + | chr7.4:85387748-85387767 | MS.gene91621:intron | 35.0% | |
TCACAATAGGGGAAAACATA+AGG | + | chr7.4:85387585-85387604 | MS.gene91621:intron | 35.0% | |
TCATTCACTCTCACCTATAT+GGG | + | chr7.4:85387448-85387467 | MS.gene91621:intron | 35.0% | |
TCTCTTCGTCCTATAACAAT+TGG | + | chr7.4:85388009-85388028 | MS.gene91621:intron | 35.0% | |
TGCCAAAAATCAACCCATAT+AGG | - | chr7.4:85387464-85387483 | None:intergenic | 35.0% | |
TTCATTCACTCTCACCTATA+TGG | + | chr7.4:85387447-85387466 | MS.gene91621:intron | 35.0% | |
! | CTTTTGTTCTCTCAAGTATC+AGG | - | chr7.4:85387654-85387673 | None:intergenic | 35.0% |
! | TCATCTGCAAAGCTTTATGT+TGG | + | chr7.4:85386912-85386931 | MS.gene91621:CDS | 35.0% |
! | TCCTCCAAATTTTCGATAGA+AGG | - | chr7.4:85387557-85387576 | None:intergenic | 35.0% |
!!! | CACCTATATGGGTTGATTTT+TGG | + | chr7.4:85387459-85387478 | MS.gene91621:intron | 35.0% |
ACAAAATCGCACAATCGCAT+GGG | - | chr7.4:85387253-85387272 | None:intergenic | 40.0% | |
ACCATCAACAACTTCTCCAT+AGG | - | chr7.4:85387062-85387081 | None:intergenic | 40.0% | |
CATAGGGAGCAAAACTTTCT+CGG | - | chr7.4:85387045-85387064 | None:intergenic | 40.0% | |
CCATCAACAACTTCTCCATA+GGG | - | chr7.4:85387061-85387080 | None:intergenic | 40.0% | |
GAGTGAACTATGCTCAAGAA+AGG | + | chr7.4:85388436-85388455 | MS.gene91621:CDS | 40.0% | |
GCCTTCTATCGAAAATTTGG+AGG | + | chr7.4:85387553-85387572 | MS.gene91621:intron | 40.0% | |
GTCACACTAGCTATAAGAGT+TGG | - | chr7.4:85387361-85387380 | None:intergenic | 40.0% | |
TGTAACAGGAACTTCATGGT+CGG | + | chr7.4:85388406-85388425 | MS.gene91621:intron | 40.0% | |
TGTCAGCGGAAATTTGGTAT+GGG | - | chr7.4:85387323-85387342 | None:intergenic | 40.0% | |
! | CTGATTTTCAATCGCAATGC+AGG | + | chr7.4:85386989-85387008 | MS.gene91621:intron | 40.0% |
! | TCTGCAAAGCTTTATGTTGG+AGG | + | chr7.4:85386915-85386934 | MS.gene91621:CDS | 40.0% |
! | TGTAACTTTTGCAACAAGCG+AGG | + | chr7.4:85387899-85387918 | MS.gene91621:CDS | 40.0% |
ATGTCCTGTCAGCGGAAATT+TGG | - | chr7.4:85387329-85387348 | None:intergenic | 45.0% | |
CAAAATCGCACAATCGCATG+GGG | - | chr7.4:85387252-85387271 | None:intergenic | 45.0% | |
CATACCAAATTTCCGCTGAC+AGG | + | chr7.4:85387322-85387341 | MS.gene91621:intron | 45.0% | |
CCCTATGGAGAAGTTGTTGA+TGG | + | chr7.4:85387058-85387077 | MS.gene91621:CDS | 45.0% | |
CTGTCAGCGGAAATTTGGTA+TGG | - | chr7.4:85387324-85387343 | None:intergenic | 45.0% | |
GACAAAATCGCACAATCGCA+TGG | - | chr7.4:85387254-85387273 | None:intergenic | 45.0% | |
GTTATCATCGACCGTGAACA+AGG | + | chr7.4:85387855-85387874 | MS.gene91621:CDS | 45.0% | |
TGCAAATGATGTCCTGTCAG+CGG | - | chr7.4:85387337-85387356 | None:intergenic | 45.0% | |
! | CGAGAAAGTTTTGCTCCCTA+TGG | + | chr7.4:85387043-85387062 | MS.gene91621:CDS | 45.0% |
! | CTTGTTATCCATGGCCTGAA+GGG | - | chr7.4:85387937-85387956 | None:intergenic | 45.0% |
CAAGGCAGGTCCAAAGGATT+TGG | + | chr7.4:85387873-85387892 | MS.gene91621:CDS | 50.0% | |
CCTTCAGGCCATGGATAACA+AGG | + | chr7.4:85387935-85387954 | MS.gene91621:CDS | 50.0% | |
CTCAAGAAAGGCCACGTTCT+GGG | + | chr7.4:85388448-85388467 | MS.gene91621:CDS | 50.0% | |
! | CCTTGTTATCCATGGCCTGA+AGG | - | chr7.4:85387938-85387957 | None:intergenic | 50.0% |
! | CTTTGGACCTGCCTTGTTCA+CGG | - | chr7.4:85387869-85387888 | None:intergenic | 50.0% |
! | GGCATGCTGGCTATGAGAAT+TGG | + | chr7.4:85387510-85387529 | MS.gene91621:intron | 50.0% |
ATCTTCTGCCCTTCAGGCCA+TGG | + | chr7.4:85387926-85387945 | MS.gene91621:CDS | 55.0% | |
CGTGAACAAGGCAGGTCCAA+AGG | + | chr7.4:85387867-85387886 | MS.gene91621:CDS | 55.0% | |
GCTCAAGAAAGGCCACGTTC+TGG | + | chr7.4:85388447-85388466 | MS.gene91621:CDS | 55.0% | |
TCATCGACCGTGAACAAGGC+AGG | + | chr7.4:85387859-85387878 | MS.gene91621:CDS | 55.0% | |
!! | GATGGTGGTGGCTATAGTGG+CGG | + | chr7.4:85388495-85388514 | MS.gene91621:CDS | 55.0% |
!! | GGAAGCATCTTCTGCCCTTC+AGG | + | chr7.4:85387920-85387939 | MS.gene91621:CDS | 55.0% |
!! | TACAGTGGTGGTGGCTTTGG+CGG | + | chr7.4:85388471-85388490 | MS.gene91621:CDS | 55.0% |
CCACCACTGTACCCAGAACG+TGG | - | chr7.4:85388462-85388481 | None:intergenic | 60.0% | |
! | AGGCCACGTTCTGGGTACAG+TGG | + | chr7.4:85388456-85388475 | MS.gene91621:CDS | 60.0% |
! | CCACGTTCTGGGTACAGTGG+TGG | + | chr7.4:85388459-85388478 | MS.gene91621:CDS | 60.0% |
! | CGTTCTGGGTACAGTGGTGG+TGG | + | chr7.4:85388462-85388481 | MS.gene91621:CDS | 60.0% |
!! | GGCGATGGTGGTGGCTATAG+TGG | + | chr7.4:85388492-85388511 | MS.gene91621:CDS | 60.0% |
!! | GGGTACAGTGGTGGTGGCTT+TGG | + | chr7.4:85388468-85388487 | MS.gene91621:CDS | 60.0% |
! | GGTGGTGGCTATAGTGGCGG+CGG | + | chr7.4:85388498-85388517 | MS.gene91621:CDS | 65.0% |
! | GGTGGTGGCTATGGTGGAGG+CGG | + | chr7.4:85388531-85388550 | MS.gene91621:CDS | 65.0% |
! | TATAGTGGCGGCGGTGGTGG+CGG | + | chr7.4:85388507-85388526 | MS.gene91621:CDS | 65.0% |
! | TATGGTGGAGGCGGTGGTGG+CGG | + | chr7.4:85388540-85388559 | MS.gene91621:CDS | 65.0% |
GGCTATAGTGGCGGCGGTGG+TGG | + | chr7.4:85388504-85388523 | MS.gene91621:CDS | 70.0% | |
GGTGGCTATAGTGGCGGCGG+TGG | + | chr7.4:85388501-85388520 | MS.gene91621:CDS | 70.0% | |
! | GGCGGTGGTGGCTATGGTGG+AGG | + | chr7.4:85388528-85388547 | MS.gene91621:CDS | 70.0% |
! | GGCTATGGTGGAGGCGGTGG+TGG | + | chr7.4:85388537-85388556 | MS.gene91621:CDS | 70.0% |
! | GGCTTTGGCGGCGATGGTGG+TGG | + | chr7.4:85388483-85388502 | MS.gene91621:CDS | 70.0% |
! | GGTGGCTATGGTGGAGGCGG+TGG | + | chr7.4:85388534-85388553 | MS.gene91621:CDS | 70.0% |
!! | GGTGGCTTTGGCGGCGATGG+TGG | + | chr7.4:85388480-85388499 | MS.gene91621:CDS | 70.0% |
!! | GGTGGTGGCTTTGGCGGCGA+TGG | + | chr7.4:85388477-85388496 | MS.gene91621:CDS | 70.0% |
! | GGCGGCGGTGGTGGCTATGG+TGG | + | chr7.4:85388525-85388544 | MS.gene91621:CDS | 75.0% |
! | GGTGGCGGCGGTGGTGGCTA+TGG | + | chr7.4:85388522-85388541 | MS.gene91621:CDS | 75.0% |
!!! | AGTGGCGGCGGTGGTGGCGG+CGG | + | chr7.4:85388510-85388529 | MS.gene91621:CDS | 80.0% |
!!! | GGTGGAGGCGGTGGTGGCGG+CGG | + | chr7.4:85388543-85388562 | MS.gene91621:CDS | 80.0% |
!!! | GGAGGCGGTGGTGGCGGCGG+TGG | + | chr7.4:85388546-85388565 | MS.gene91621:CDS | 85.0% |
!!! | GGCGGTGGTGGCGGCGGTGG+TGG | + | chr7.4:85388516-85388535 | MS.gene91621:CDS | 85.0% |
!!! | GGCGGCGGTGGTGGCGGCGG+TGG | + | chr7.4:85388513-85388532 | MS.gene91621:CDS | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 85386801 | 85388593 | 85386801 | ID=MS.gene91621 |
chr7.4 | mRNA | 85386801 | 85388593 | 85386801 | ID=MS.gene91621.t1;Parent=MS.gene91621 |
chr7.4 | exon | 85386801 | 85386936 | 85386801 | ID=MS.gene91621.t1.exon1;Parent=MS.gene91621.t1 |
chr7.4 | CDS | 85386801 | 85386936 | 85386801 | ID=cds.MS.gene91621.t1;Parent=MS.gene91621.t1 |
chr7.4 | exon | 85387011 | 85387079 | 85387011 | ID=MS.gene91621.t1.exon2;Parent=MS.gene91621.t1 |
chr7.4 | CDS | 85387011 | 85387079 | 85387011 | ID=cds.MS.gene91621.t1;Parent=MS.gene91621.t1 |
chr7.4 | exon | 85387850 | 85387956 | 85387850 | ID=MS.gene91621.t1.exon3;Parent=MS.gene91621.t1 |
chr7.4 | CDS | 85387850 | 85387956 | 85387850 | ID=cds.MS.gene91621.t1;Parent=MS.gene91621.t1 |
chr7.4 | exon | 85388414 | 85388593 | 85388414 | ID=MS.gene91621.t1.exon4;Parent=MS.gene91621.t1 |
chr7.4 | CDS | 85388414 | 85388593 | 85388414 | ID=cds.MS.gene91621.t1;Parent=MS.gene91621.t1 |
Gene Sequence |
Protein sequence |