AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91623

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91623.t1 MTR_7g013730 84.791 263 30 2 1 263 1 253 3.07e-125 356
MS.gene91623.t1 MTR_7g013740 73.611 144 25 1 1 144 1 131 2.93e-66 203
MS.gene91623.t1 MTR_4g109540 70.161 124 33 2 1 121 1 123 3.70e-53 173
MS.gene91623.t1 MTR_3g014000 66.667 135 28 4 1 128 1 125 2.36e-51 164
MS.gene91623.t1 MTR_3g025880 61.719 128 45 2 1 124 1 128 7.36e-51 172
MS.gene91623.t1 MTR_4g109540 65.909 132 33 3 1 121 1 131 4.01e-50 166
MS.gene91623.t1 MTR_3g084040 52.941 119 51 2 1 119 1 114 5.31e-36 125
MS.gene91623.t1 MTR_3g084040 52.885 104 44 2 1 104 1 99 7.42e-29 105
MS.gene91623.t1 MTR_4g070080 53.947 76 35 0 41 116 7 82 8.69e-25 96.3
MS.gene91623.t1 MTR_4g070080 53.947 76 35 0 41 116 7 82 1.99e-24 96.3
MS.gene91623.t1 MTR_3g080130 43.750 96 48 1 41 130 37 132 1.13e-23 93.6
MS.gene91623.t1 MTR_4g070190 51.316 76 37 0 41 116 9 84 2.61e-22 90.5
MS.gene91623.t1 MTR_4g070140 48.684 76 39 0 41 116 9 84 7.47e-22 90.1
MS.gene91623.t1 MTR_7g105260 44.444 90 49 1 27 116 20 108 1.32e-20 85.5
MS.gene91623.t1 MTR_7g099940 40.164 122 62 2 1 119 1 114 5.98e-20 84.0
MS.gene91623.t1 MTR_4g104470 43.878 98 55 0 27 124 203 300 9.76e-20 86.7
MS.gene91623.t1 MTR_4g104470 37.634 93 58 0 41 133 123 215 2.29e-13 68.9
MS.gene91623.t1 MTR_4g063560 38.462 91 56 0 26 116 19 109 1.20e-19 82.0
MS.gene91623.t1 MTR_3g075500 38.542 96 54 1 28 123 199 289 1.63e-19 85.9
MS.gene91623.t1 MTR_1g045510 47.368 76 40 0 41 116 205 280 9.63e-18 81.3
MS.gene91623.t1 MTR_1g045510 36.585 82 51 1 41 122 114 194 9.67e-13 67.0
MS.gene91623.t1 MTR_4g081520 41.758 91 51 1 35 123 44 134 1.13e-17 77.8
MS.gene91623.t1 MTR_1g064230 41.667 84 49 0 41 124 197 280 1.57e-17 80.5
MS.gene91623.t1 MTR_3g055990 48.101 79 39 1 41 119 7 83 1.67e-17 82.0
MS.gene91623.t1 MTR_3g055990 48.101 79 39 1 41 119 7 83 1.76e-17 82.0
MS.gene91623.t1 MTR_3g029580 41.667 96 51 3 23 114 12 106 1.38e-16 74.7
MS.gene91623.t1 MTR_5g097580 48.148 81 40 1 39 119 5 83 3.63e-16 78.2
MS.gene91623.t1 MTR_5g097580 34.568 81 52 1 39 119 105 184 7.10e-11 62.4
MS.gene91623.t1 MTR_5g097580 48.148 81 40 1 39 119 5 83 3.72e-16 78.2
MS.gene91623.t1 MTR_5g097580 34.568 81 52 1 39 119 105 184 7.60e-11 62.4
MS.gene91623.t1 MTR_2g026180 43.373 83 45 1 37 119 1 81 6.21e-16 77.4
MS.gene91623.t1 MTR_2g026180 32.692 104 69 1 33 136 99 201 8.05e-11 62.0
MS.gene91623.t1 MTR_5g044970 35.294 102 62 2 42 142 12 110 4.96e-15 71.2
MS.gene91623.t1 MTR_6g477870 37.500 80 50 0 41 120 96 175 6.84e-15 71.2
MS.gene91623.t1 MTR_3g092490 26.950 141 101 2 18 157 3 142 8.67e-15 70.9
MS.gene91623.t1 MTR_6g004810 31.944 144 91 4 7 148 99 237 9.30e-15 73.6
MS.gene91623.t1 MTR_5g023060 31.515 165 104 4 42 199 133 295 1.05e-14 72.8
MS.gene91623.t1 MTR_1g092860 38.272 81 50 0 36 116 188 268 1.19e-14 72.4
MS.gene91623.t1 MTR_3g092490 26.950 141 101 2 18 157 3 142 3.01e-14 70.9
MS.gene91623.t1 MTR_3g092490 26.950 141 101 2 18 157 3 142 3.03e-14 70.9
MS.gene91623.t1 MTR_3g103420 44.444 81 43 1 40 120 10 88 3.42e-14 72.0
MS.gene91623.t1 MTR_7g106440 43.023 86 49 0 38 123 210 295 3.55e-14 71.6
MS.gene91623.t1 MTR_7g106440 31.092 119 76 1 41 159 110 222 7.52e-12 64.7
MS.gene91623.t1 MTR_1g073690 40.506 79 45 1 41 119 7 83 4.10e-14 72.0
MS.gene91623.t1 MTR_1g073690 38.636 88 52 2 37 123 109 195 7.22e-13 68.2
MS.gene91623.t1 MTR_7g117495 40.741 81 47 1 41 121 19 98 4.58e-14 70.5
MS.gene91623.t1 MTR_4g124940 40.260 77 46 0 42 118 133 209 5.01e-14 71.6
MS.gene91623.t1 MTR_7g117495 40.741 81 47 1 41 121 19 98 5.96e-14 70.1
MS.gene91623.t1 MTR_8g022050 38.961 77 47 0 42 118 149 225 8.04e-14 70.9
MS.gene91623.t1 MTR_4g081510 41.026 78 46 0 42 119 46 123 8.72e-14 68.2
MS.gene91623.t1 MTR_8g463890 32.759 116 63 3 6 116 43 148 2.66e-13 69.7
MS.gene91623.t1 MTR_4g117350 38.372 86 49 1 38 123 69 150 3.25e-13 66.2
MS.gene91623.t1 MTR_8g024520 45.000 60 33 0 40 99 25 84 3.41e-13 68.2
MS.gene91623.t1 MTR_8g024520 45.000 60 33 0 40 99 25 84 3.47e-13 68.2
MS.gene91623.t1 MTR_3g029580 43.038 79 40 3 23 97 12 89 3.96e-13 65.5
MS.gene91623.t1 MTR_3g116130 35.417 96 56 3 31 121 16 110 4.18e-13 68.2
MS.gene91623.t1 MTR_4g035310 32.500 120 71 4 41 153 17 133 5.49e-13 67.4
MS.gene91623.t1 MTR_4g035310 32.500 120 71 4 41 153 17 133 5.83e-13 67.4
MS.gene91623.t1 MTR_3g109090 37.662 77 48 0 42 118 147 223 7.80e-13 68.2
MS.gene91623.t1 MTR_3g109090 37.662 77 48 0 42 118 131 207 8.24e-13 68.2
MS.gene91623.t1 MTR_6g477870 39.344 61 37 0 41 101 96 156 9.32e-13 65.1
MS.gene91623.t1 MTR_7g118120 35.366 82 53 0 40 121 104 185 1.06e-12 67.8
MS.gene91623.t1 MTR_1g056520 34.884 86 56 0 38 123 205 290 1.35e-12 67.0
MS.gene91623.t1 MTR_3g075500 35.065 77 45 1 28 104 199 270 1.42e-12 66.2
MS.gene91623.t1 MTR_3g075500 40.476 84 49 1 40 122 109 192 6.47e-11 61.6
MS.gene91623.t1 MTR_4g122650 40.698 86 47 3 40 121 88 173 2.33e-12 67.0
MS.gene91623.t1 MTR_3g116130 37.805 82 49 2 41 121 30 110 2.44e-12 66.6
MS.gene91623.t1 MTR_5g064120 38.961 77 46 1 41 117 17 92 3.57e-12 65.5
MS.gene91623.t1 MTR_4g074930 44.872 78 41 2 42 119 378 453 3.83e-12 66.2
MS.gene91623.t1 MTR_4g074930 44.872 78 41 2 42 119 366 441 3.84e-12 66.2
MS.gene91623.t1 MTR_3g065190 40.741 81 47 1 40 119 112 192 3.87e-12 65.9
MS.gene91623.t1 MTR_4g074930 44.872 78 41 2 42 119 343 418 4.03e-12 66.2
MS.gene91623.t1 MTR_4g074930 44.872 78 41 2 42 119 331 406 4.35e-12 66.2
MS.gene91623.t1 MTR_7g094660 32.174 115 74 2 7 119 296 408 1.37e-11 64.7
MS.gene91623.t1 MTR_5g071540 32.000 75 51 0 39 113 38 112 1.39e-11 61.2
MS.gene91623.t1 MTR_5g017280 37.349 83 50 1 37 119 1 81 1.47e-11 64.3
MS.gene91623.t1 MTR_5g017280 37.349 83 50 1 37 119 1 81 1.69e-11 63.9
MS.gene91623.t1 MTR_4g036415 36.585 82 52 0 35 116 446 527 1.71e-11 64.3
MS.gene91623.t1 MTR_4g117350 41.538 65 38 0 38 102 69 133 3.22e-11 60.1
MS.gene91623.t1 MTR_4g088010 31.356 118 72 3 7 116 35 151 3.96e-11 62.8
MS.gene91623.t1 MTR_2g026180 32.692 104 69 1 33 136 29 131 4.63e-11 62.8
MS.gene91623.t1 MTR_3g082650 36.585 82 50 1 38 119 16 95 5.13e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91623.t1 AT5G61030 63.025 119 44 0 1 119 1 119 1.06e-52 174
MS.gene91623.t1 AT5G61030 63.025 119 44 0 1 119 1 119 1.06e-52 174
MS.gene91623.t1 AT1G74230 59.322 118 41 3 1 118 1 111 1.66e-43 149
MS.gene91623.t1 AT4G13850 49.580 119 55 2 1 119 1 114 6.64e-32 114
MS.gene91623.t1 AT3G23830 48.333 120 57 2 1 120 1 115 7.31e-32 114
MS.gene91623.t1 AT3G23830 48.333 120 57 2 1 120 1 115 7.31e-32 114
MS.gene91623.t1 AT4G13850 49.580 119 55 2 1 119 1 114 7.51e-32 115
MS.gene91623.t1 AT4G13850 49.580 119 55 2 1 119 1 114 9.70e-32 115
MS.gene91623.t1 AT5G06210 46.087 115 59 2 17 130 10 122 1.77e-27 103
MS.gene91623.t1 AT4G13850 50.000 144 64 3 1 144 1 136 4.03e-27 103
MS.gene91623.t1 AT2G21660 51.316 76 37 0 41 116 9 84 2.62e-22 90.5
MS.gene91623.t1 AT4G39260 45.556 90 45 1 41 130 7 92 2.85e-22 88.6
MS.gene91623.t1 AT2G21660 51.316 76 37 0 41 116 9 84 3.99e-22 90.5
MS.gene91623.t1 AT1G18630 49.383 81 41 0 36 116 32 112 6.92e-22 89.4
MS.gene91623.t1 AT3G08000 53.086 81 38 0 41 121 42 122 6.59e-21 86.3
MS.gene91623.t1 AT5G59865 45.833 96 51 1 24 119 11 105 1.48e-20 84.7
MS.gene91623.t1 AT4G39260 47.368 76 40 0 41 116 7 82 5.68e-20 84.7
MS.gene91623.t1 AT3G26420 44.318 88 45 1 41 128 8 91 2.04e-19 85.1
MS.gene91623.t1 AT4G24770 44.304 79 44 0 41 119 245 323 8.37e-19 84.7
MS.gene91623.t1 AT4G24770 40.476 84 49 1 40 122 150 233 7.54e-13 67.8
MS.gene91623.t1 AT4G24770 44.304 79 44 0 41 119 245 323 8.37e-19 84.7
MS.gene91623.t1 AT4G24770 40.476 84 49 1 40 122 150 233 7.54e-13 67.8
MS.gene91623.t1 AT5G47320 39.831 118 62 2 1 118 1 109 1.73e-18 81.6
MS.gene91623.t1 AT2G27330 43.182 88 47 2 27 114 11 95 2.06e-18 79.0
MS.gene91623.t1 AT5G04280 40.777 103 57 1 40 142 7 105 2.27e-18 83.2
MS.gene91623.t1 AT5G50250 43.210 81 46 0 41 121 208 288 3.10e-18 82.4
MS.gene91623.t1 AT5G50250 41.667 84 48 1 40 122 113 196 2.89e-13 68.6
MS.gene91623.t1 AT4G13860 48.684 76 39 0 39 114 2 77 6.46e-18 76.6
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 7.62e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 7.62e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 7.62e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 7.62e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 7.62e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 8.86e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 8.86e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 8.86e-18 82.8
MS.gene91623.t1 AT5G55550 50.633 79 37 1 41 119 7 83 8.86e-18 82.8
MS.gene91623.t1 AT4G26650 46.067 89 45 2 32 119 6 92 3.37e-17 80.9
MS.gene91623.t1 AT4G26650 46.067 89 45 2 32 119 3 89 3.38e-17 80.9
MS.gene91623.t1 AT5G55550 53.521 71 31 1 41 111 7 75 1.24e-16 79.7
MS.gene91623.t1 AT5G55550 53.521 71 31 1 41 111 7 75 1.33e-16 79.3
MS.gene91623.t1 AT2G37220 41.463 82 46 1 41 122 205 284 1.59e-16 77.8
MS.gene91623.t1 AT2G37220 41.892 74 43 0 41 114 92 165 5.76e-12 64.7
MS.gene91623.t1 AT3G07810 44.304 79 42 1 41 119 7 83 1.84e-16 79.0
MS.gene91623.t1 AT3G07810 44.304 79 42 1 41 119 7 83 1.95e-16 79.0
MS.gene91623.t1 AT3G46020 39.175 97 57 1 39 133 6 102 2.71e-16 72.8
MS.gene91623.t1 AT2G37510 40.506 79 47 0 36 114 30 108 5.48e-16 73.2
MS.gene91623.t1 AT1G22330 40.777 103 57 3 40 139 17 118 1.82e-15 74.7
MS.gene91623.t1 AT3G53460 40.244 82 47 1 41 122 258 337 1.89e-15 75.5
MS.gene91623.t1 AT3G53460 40.244 82 47 1 41 122 258 337 1.89e-15 75.5
MS.gene91623.t1 AT3G53460 40.244 82 47 1 41 122 258 337 1.89e-15 75.5
MS.gene91623.t1 AT5G47620 43.373 83 45 1 37 119 3 83 2.28e-15 75.5
MS.gene91623.t1 AT5G47620 43.373 83 45 1 37 119 3 83 2.28e-15 75.5
MS.gene91623.t1 AT5G47620 43.373 83 45 1 37 119 3 83 2.28e-15 75.5
MS.gene91623.t1 AT3G53460 40.244 82 47 1 41 122 279 358 2.56e-15 75.1
MS.gene91623.t1 AT2G33410 44.304 79 42 1 41 119 7 83 2.92e-15 75.1
MS.gene91623.t1 AT2G46780 35.849 106 62 3 41 143 23 125 4.16e-15 74.3
MS.gene91623.t1 AT2G46780 35.849 106 62 3 41 143 23 125 4.16e-15 74.3
MS.gene91623.t1 AT1G76460 41.176 85 48 2 41 124 25 108 4.93e-15 73.6
MS.gene91623.t1 AT4G39260 47.706 109 51 1 41 149 7 109 5.38e-15 70.1
MS.gene91623.t1 AT3G20930 35.714 112 58 2 20 125 270 373 7.82e-15 73.9
MS.gene91623.t1 AT4G14300 36.607 112 69 1 41 152 7 116 8.90e-15 73.9
MS.gene91623.t1 AT4G14300 36.607 112 69 1 41 152 7 116 8.90e-15 73.9
MS.gene91623.t1 AT1G60000 43.421 76 43 0 41 116 178 253 1.20e-14 72.0
MS.gene91623.t1 AT3G14100 37.662 77 48 0 42 118 146 222 1.29e-14 73.6
MS.gene91623.t1 AT2G21690 40.741 81 47 1 43 122 10 90 1.98e-14 68.6
MS.gene91623.t1 AT4G13860 55.932 59 26 0 56 114 2 60 2.24e-14 67.0
MS.gene91623.t1 AT3G52380 43.529 85 48 0 38 122 217 301 3.48e-14 71.6
MS.gene91623.t1 AT3G52380 41.333 75 44 0 41 115 117 191 4.18e-14 71.2
MS.gene91623.t1 AT5G47620 51.613 62 30 0 37 98 3 64 3.50e-14 72.0
MS.gene91623.t1 AT1G13690 34.314 102 63 2 42 142 15 113 4.89e-14 68.9
MS.gene91623.t1 AT1G60650 36.792 106 55 2 39 136 11 112 4.97e-14 70.9
MS.gene91623.t1 AT1G60650 36.792 106 55 2 39 136 11 112 4.97e-14 70.9
MS.gene91623.t1 AT5G54580 40.860 93 52 1 27 119 46 135 8.30e-14 67.8
MS.gene91623.t1 AT1G54080 36.364 77 49 0 42 118 150 226 1.06e-13 70.9
MS.gene91623.t1 AT1G20880 39.535 86 48 3 41 124 25 108 1.09e-13 69.7
MS.gene91623.t1 AT1G20880 39.535 86 48 3 41 124 25 108 1.09e-13 69.7
MS.gene91623.t1 AT1G20880 39.535 86 48 3 41 124 25 108 1.09e-13 69.7
MS.gene91623.t1 AT1G22910 35.106 94 55 3 40 129 13 104 1.49e-13 68.9
MS.gene91623.t1 AT1G22910 35.106 94 55 3 40 129 13 104 1.60e-13 68.9
MS.gene91623.t1 AT1G78260 40.260 77 45 1 41 117 18 93 2.66e-13 68.6
MS.gene91623.t1 AT1G33470 35.714 98 57 3 41 134 8 103 3.41e-13 67.8
MS.gene91623.t1 AT1G17370 37.662 77 48 0 42 118 141 217 3.94e-13 68.9
MS.gene91623.t1 AT1G17370 37.662 77 48 0 42 118 141 217 4.15e-13 68.9
MS.gene91623.t1 AT1G33470 35.714 98 57 3 41 134 8 103 4.20e-13 67.4
MS.gene91623.t1 AT1G33470 35.714 98 57 3 41 134 8 103 4.23e-13 67.4
MS.gene91623.t1 AT1G78260 39.744 78 46 1 40 117 17 93 5.17e-13 67.8
MS.gene91623.t1 AT3G20930 34.188 117 58 3 20 125 270 378 1.00e-12 67.8
MS.gene91623.t1 AT1G22910 35.484 93 54 3 41 129 14 104 1.15e-12 67.4
MS.gene91623.t1 AT1G73530 34.146 82 54 0 39 120 76 157 2.58e-12 64.3
MS.gene91623.t1 AT3G15010 31.897 116 64 3 6 116 45 150 2.81e-12 66.6
MS.gene91623.t1 AT3G15010 31.897 116 64 3 6 116 45 150 2.81e-12 66.6
MS.gene91623.t1 AT4G16280 39.773 88 49 3 38 121 118 205 5.74e-12 65.9
MS.gene91623.t1 AT4G16280 39.773 88 49 3 38 121 43 130 6.15e-12 65.9
MS.gene91623.t1 AT1G47490 36.170 94 59 1 42 134 199 292 6.57e-12 65.5
MS.gene91623.t1 AT4G16280 39.773 88 49 3 38 121 118 205 6.88e-12 65.5
MS.gene91623.t1 AT1G54080 34.568 81 49 1 42 118 150 230 6.92e-12 65.5
MS.gene91623.t1 AT1G47490 36.170 94 59 1 42 134 199 292 7.38e-12 64.7
MS.gene91623.t1 AT1G58470 39.241 79 46 1 41 119 7 83 7.79e-12 65.1
MS.gene91623.t1 AT1G58470 39.241 79 46 1 41 119 7 83 7.79e-12 65.1
MS.gene91623.t1 AT3G13224 28.125 96 64 1 35 125 104 199 8.65e-12 64.7
MS.gene91623.t1 AT3G13224 34.831 89 56 1 31 119 10 96 2.30e-11 63.5
MS.gene91623.t1 AT5G51300 30.303 132 69 1 42 150 482 613 8.81e-12 65.5
MS.gene91623.t1 AT5G51300 30.303 132 69 1 42 150 482 613 8.81e-12 65.5
MS.gene91623.t1 AT5G51300 30.303 132 69 1 42 150 482 613 8.81e-12 65.5
MS.gene91623.t1 AT2G19380 34.021 97 61 2 30 126 398 491 1.33e-11 64.7
MS.gene91623.t1 AT3G13224 32.184 87 57 1 33 119 3 87 1.54e-11 63.9
MS.gene91623.t1 AT3G13224 28.125 96 64 1 35 125 95 190 1.63e-11 63.9
MS.gene91623.t1 AT1G47500 35.106 94 60 1 42 134 201 294 1.82e-11 63.9
MS.gene91623.t1 AT5G19960 38.298 94 54 2 42 132 9 101 2.06e-11 63.5
MS.gene91623.t1 AT1G49600 33.613 119 78 1 42 159 215 333 2.48e-11 63.5
MS.gene91623.t1 AT5G08695 32.500 80 54 0 41 120 228 307 2.91e-11 63.9
MS.gene91623.t1 AT2G22100 35.556 90 53 2 33 122 156 240 2.94e-11 63.2
MS.gene91623.t1 AT5G40490 38.043 92 51 2 36 122 121 211 2.97e-11 63.5
MS.gene91623.t1 AT5G40490 36.585 82 50 1 38 119 40 119 5.04e-11 62.8
MS.gene91623.t1 AT4G36960 37.975 79 47 1 41 119 4 80 3.09e-11 63.2
MS.gene91623.t1 AT4G36960 37.975 79 47 1 41 119 4 80 3.09e-11 63.2
MS.gene91623.t1 AT1G49760 35.443 79 51 0 39 117 44 122 3.11e-11 63.5
MS.gene91623.t1 AT1G49760 35.443 79 51 0 39 117 44 122 3.11e-11 63.5
MS.gene91623.t1 AT2G43370 31.765 85 58 0 40 124 64 148 3.26e-11 61.6
MS.gene91623.t1 AT5G53680 35.065 77 49 1 40 116 13 88 3.84e-11 60.8
MS.gene91623.t1 AT1G17640 40.506 79 45 1 41 119 67 143 4.05e-11 62.8
MS.gene91623.t1 AT1G17640 40.506 79 45 1 41 119 67 143 4.05e-11 62.8
MS.gene91623.t1 AT1G17640 40.506 79 45 1 41 119 67 143 4.05e-11 62.8
MS.gene91623.t1 AT1G49600 33.613 119 78 1 42 159 215 333 4.05e-11 63.2
MS.gene91623.t1 AT1G49600 33.613 119 78 1 42 159 215 333 4.05e-11 63.2
MS.gene91623.t1 AT1G47500 35.106 94 60 1 42 134 201 294 4.19e-11 62.8
MS.gene91623.t1 AT5G53720 38.158 76 46 1 41 116 10 84 4.25e-11 58.9
MS.gene91623.t1 AT4G20030 30.769 78 54 0 39 116 39 116 7.67e-11 59.3
MS.gene91623.t1 AT4G00830 28.049 82 59 0 40 121 116 197 8.10e-11 62.4
MS.gene91623.t1 AT4G00830 28.049 82 59 0 40 121 116 197 8.10e-11 62.4
MS.gene91623.t1 AT2G37510 30.769 104 47 1 36 114 30 133 8.47e-11 59.7
MS.gene91623.t1 AT5G11412 36.364 77 48 1 40 116 52 127 8.63e-11 59.7
MS.gene91623.t1 AT4G00830 28.049 82 59 0 40 121 116 197 8.72e-11 62.0
MS.gene91623.t1 AT4G00830 28.049 82 59 0 40 121 116 197 8.72e-11 62.0
MS.gene91623.t1 AT4G00830 28.049 82 59 0 40 121 116 197 8.72e-11 62.0

Find 98 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGCGTTCTTTGGTAAAA+TGG 0.181499 7.4:+85397384 None:intergenic
ATTCAGCAGCAACTCTAATT+TGG 0.204920 7.4:+85399690 MS.gene91623:CDS
ACAGGCAGGTCCCGAGGTTT+TGG 0.269411 7.4:+85398463 MS.gene91623:CDS
GGTGGTGGTGGCGGAAATTA+TGG 0.279552 7.4:+85399550 MS.gene91623:CDS
CCTGGTTATCCATGGCTTGC+AGG 0.291915 7.4:-85398525 None:intergenic
AGTGGCGGTGGTGGAAATTA+TGG 0.311221 7.4:+85399493 MS.gene91623:CDS
TGTGCTTGACAGCAGAATTC+TGG 0.314240 7.4:-85397417 None:intergenic
GGTGGTGGTGGCGGAAATTA+TGG 0.318069 7.4:+85399529 MS.gene91623:CDS
GTTTGAGCAATGGCGTTCTT+TGG 0.330058 7.4:+85397376 None:intergenic
GGCGGTGGTGGCGGCGGCTA+TGG 0.332870 7.4:+85399451 MS.gene91623:CDS
GAAAGGGCACGTCCTGGATT+TGG 0.363001 7.4:+85399397 MS.gene91623:CDS
CGCTATGGAGAAGTTCTTGA+TGG 0.365325 7.4:+85397642 MS.gene91623:CDS
TTCAGCAGCAACTCTAATTT+GGG 0.367310 7.4:+85399691 MS.gene91623:CDS
AGCAACTCTAATTTGGGATA+TGG 0.368185 7.4:+85399697 MS.gene91623:CDS
GGCGGCTATGGCGGTGGTGG+CGG 0.369506 7.4:+85399463 MS.gene91623:CDS
GGTGGCTATGGCGGTGGTGG+CGG 0.379502 7.4:+85399442 MS.gene91623:CDS
ATTATCATGGATCGTGAAAC+AGG 0.392250 7.4:+85398445 MS.gene91623:CDS
GGCTATGGCGGTGGTGGCGG+CGG 0.402645 7.4:+85399445 MS.gene91623:CDS
GGTTATGGCGGCGGTGGCTA+TGG 0.410612 7.4:+85399430 MS.gene91623:CDS
GGTGGCGGCGGCTATGGCGG+TGG 0.411672 7.4:+85399457 MS.gene91623:CDS
GGCGGTGGCTATGGTGGTGG+TGG 0.412717 7.4:+85399517 MS.gene91623:CDS
GGAGAAGGTAAGAATGAATT+CGG 0.414846 7.4:+85399742 MS.gene91623:CDS
GGCGGCGGCTATGGCGGTGG+TGG 0.419000 7.4:+85399460 MS.gene91623:CDS
GGCTATGGCGGTGGTGGCGG+TGG 0.420092 7.4:+85399466 MS.gene91623:CDS
GGCGGTGGCTATGGCGGTGG+TGG 0.431899 7.4:+85399439 MS.gene91623:CDS
AATTATGGTGGCGGTGGCTA+TGG 0.434778 7.4:+85399508 MS.gene91623:CDS
TGGCCACCAGTATAGCTGTC+TGG 0.436161 7.4:-85399637 None:intergenic
GCTATACTGGTGGCCATGTC+GGG 0.440508 7.4:+85399644 MS.gene91623:CDS
GGTGGCTATGGTGGTGGTGG+CGG 0.440709 7.4:+85399520 MS.gene91623:CDS
GGTGGTGGCGGCGGCTATGG+CGG 0.446142 7.4:+85399454 MS.gene91623:CDS
ATGGCGTTCTTTGGTAAAAT+GGG 0.448549 7.4:+85397385 MS.gene91623:CDS
GGTGCCCCAGACAGCTATAC+TGG 0.451697 7.4:+85399631 MS.gene91623:CDS
CTTCTCCTATTCCGTCATCC+TGG 0.452476 7.4:-85399726 None:intergenic
GGTGGTGGCGGTGGCTATAG+TGG 0.453178 7.4:+85399475 MS.gene91623:CDS
TCAGATTGATCATTGTTCTC+TGG 0.454360 7.4:-85399790 None:intergenic
CGTCCTGGATTTGGTGGTGG+TGG 0.454483 7.4:+85399406 MS.gene91623:CDS
TGGTTGTCACAGGAACTTCA+TGG 0.455403 7.4:+85399346 MS.gene91623:intron
GGTGGTGGTTATGGCGGCGG+TGG 0.457131 7.4:+85399424 MS.gene91623:CDS
GGCCACCAGTATAGCTGTCT+GGG 0.458472 7.4:-85399636 None:intergenic
TGCTGTCAAGCACATCAATC+AGG 0.461224 7.4:+85397426 MS.gene91623:CDS
GGAAATTATGGTGGTGGTGG+CGG 0.465603 7.4:+85399541 MS.gene91623:CDS
TCTTTCAGCAAAGATTATCA+TGG 0.471143 7.4:+85398432 MS.gene91623:intron
GGTGGTGGTGGTTATGGCGG+CGG 0.471643 7.4:+85399421 MS.gene91623:CDS
CCTGGATTTGGTGGTGGTGG+TGG 0.475490 7.4:+85399409 MS.gene91623:CDS
GGTGGCTATAGTGGCGGTGG+TGG 0.482262 7.4:+85399484 MS.gene91623:CDS
GGCGGCGGTGGCTATGGCGG+TGG 0.494933 7.4:+85399436 MS.gene91623:CDS
TATGGTGGTGGTGGTACATA+TGG 0.495451 7.4:+85399568 MS.gene91623:CDS
ATCCATGGCTTGCAGGGCAG+AGG 0.505179 7.4:-85398518 None:intergenic
GGTGGCGGTGGCTATGGTGG+TGG 0.511997 7.4:+85399514 MS.gene91623:CDS
AGCCACCAGGATGACGGAAT+AGG 0.512460 7.4:+85399721 MS.gene91623:CDS
GGCGGTGGCTATAGTGGCGG+TGG 0.516623 7.4:+85399481 MS.gene91623:CDS
CGCAATGATTATAACAGTAG+TGG 0.517265 7.4:+85399592 MS.gene91623:CDS
AGCTATACTGGTGGCCATGT+CGG 0.518050 7.4:+85399643 MS.gene91623:CDS
GCTACAGAAAGGGCACGTCC+TGG 0.522628 7.4:+85399391 MS.gene91623:CDS
CTGGTTATCCATGGCTTGCA+GGG 0.522966 7.4:-85398524 None:intergenic
GGCGGAAATTATGGTGGTGG+TGG 0.524909 7.4:+85399538 MS.gene91623:CDS
TATGGTGGCGGTGGCTATGG+TGG 0.530534 7.4:+85399511 MS.gene91623:CDS
CCTGCAAGCCATGGATAACC+AGG 0.536544 7.4:+85398525 MS.gene91623:CDS
GTCGGGACTACTTATGCAGC+TGG 0.539987 7.4:+85399661 MS.gene91623:CDS
AAATATCTGACCTCACCTAC+GGG 0.541274 7.4:-85399827 None:intergenic
GGCACATGGTTGTTATCTAA+CGG 0.545472 7.4:-85399769 None:intergenic
AGTGAACTATGCTACAGAAA+GGG 0.549793 7.4:+85399381 MS.gene91623:CDS
GGCGGAAATTATGGTGGTGG+TGG 0.550547 7.4:+85399559 MS.gene91623:CDS
GCACGTCCTGGATTTGGTGG+TGG 0.551335 7.4:+85399403 MS.gene91623:CDS
TCATGGATCGTGAAACAGGC+AGG 0.555548 7.4:+85398449 MS.gene91623:CDS
AGGGCACGTCCTGGATTTGG+TGG 0.560582 7.4:+85399400 MS.gene91623:CDS
ATCCTCTGCCCTGCAAGCCA+TGG 0.561128 7.4:+85398516 MS.gene91623:CDS
AGTTATGAAGCCAAAACCTC+GGG 0.561538 7.4:-85398473 None:intergenic
GGTGGCGGAAATTATGGTGG+TGG 0.561564 7.4:+85399535 MS.gene91623:CDS
GGTGGCGGAAATTATGGTGG+TGG 0.561564 7.4:+85399556 MS.gene91623:CDS
AAAATATCTGACCTCACCTA+CGG 0.565624 7.4:-85399828 None:intergenic
GATCATTGTTCTCTGGCACA+TGG 0.570782 7.4:-85399783 None:intergenic
TATGGCGGCGGTGGCTATGG+CGG 0.577355 7.4:+85399433 MS.gene91623:CDS
GGTGGTGGCGGAAATTATGG+TGG 0.577570 7.4:+85399532 MS.gene91623:CDS
GGTGGTGGCGGAAATTATGG+TGG 0.577570 7.4:+85399553 MS.gene91623:CDS
GGTGGAAATTATGGTGGCGG+TGG 0.579466 7.4:+85399502 MS.gene91623:CDS
GAGTGAACTATGCTACAGAA+AGG 0.582117 7.4:+85399380 MS.gene91623:CDS
TGATAATACCTGGTTATCCA+TGG 0.583626 7.4:-85398533 None:intergenic
TATGGTAGCCACCAGGATGA+CGG 0.586796 7.4:+85399715 MS.gene91623:CDS
GGTGGTGGAAATTATGGTGG+CGG 0.594867 7.4:+85399499 MS.gene91623:CDS
CATAACTTTCGCAACTAGCG+AGG 0.595409 7.4:+85398489 MS.gene91623:CDS
CTGCATAAGTAGTCCCGACA+TGG 0.604557 7.4:-85399657 None:intergenic
AAGTTATGAAGCCAAAACCT+CGG 0.608782 7.4:-85398474 None:intergenic
CGTGAAACAGGCAGGTCCCG+AGG 0.612383 7.4:+85398457 MS.gene91623:CDS
CAGGATGACGGAATAGGAGA+AGG 0.614651 7.4:+85399727 MS.gene91623:CDS
CTCCTATTCCGTCATCCTGG+TGG 0.633150 7.4:-85399723 None:intergenic
GCCCCAGACAGCTATACTGG+TGG 0.637102 7.4:+85399634 MS.gene91623:CDS
GGCGGTGGTGGAAATTATGG+TGG 0.639052 7.4:+85399496 MS.gene91623:CDS
TATGCTGAGACCCGTAGGTG+AGG 0.642366 7.4:+85399817 MS.gene91623:CDS
TGTCACAGGAACTTCATGGT+CGG 0.655084 7.4:+85399350 MS.gene91623:intron
CTGATTGCTTGAAATAACGA+AGG 0.656640 7.4:-85397466 None:intergenic
TTTGGGATATGGTAGCCACC+AGG 0.660216 7.4:+85399708 MS.gene91623:CDS
ATGACTATGCTGAGACCCGT+AGG 0.661801 7.4:+85399812 MS.gene91623:CDS
GCCACCAGTATAGCTGTCTG+GGG 0.683848 7.4:-85399635 None:intergenic
GGGACTACTTATGCAGCTGG+TGG 0.685565 7.4:+85399664 MS.gene91623:CDS
AGTAGTGGAAGCTATGCAAG+TGG 0.688222 7.4:+85399607 MS.gene91623:CDS
GGTGGCGGTGGCTATAGTGG+CGG 0.689439 7.4:+85399478 MS.gene91623:CDS
AGTGGAAGCTATGCAAGTGG+TGG 0.727125 7.4:+85399610 MS.gene91623:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATGTTAAATTTTAAAAA+TGG + chr7.4:85397533-85397552 MS.gene91623:intron 10.0%
!!! TATTTGTACAATTTTTTATA+TGG + chr7.4:85399210-85399229 MS.gene91623:intron 10.0%
!!! TTATTATTTCTAACTTATTT+CGG - chr7.4:85398685-85398704 None:intergenic 10.0%
!! CTTGAAGAATATATTTAAAA+AGG + chr7.4:85398792-85398811 MS.gene91623:intron 15.0%
!! TAATAGTCATATAAAAAAAG+CGG + chr7.4:85398334-85398353 MS.gene91623:intron 15.0%
!! TCAATTTGAATTTATGATAA+TGG - chr7.4:85399068-85399087 None:intergenic 15.0%
!! TCTATCAAATCATATATAAA+AGG - chr7.4:85398273-85398292 None:intergenic 15.0%
!!! AATTAGAAATTCAAACTTTT+TGG - chr7.4:85397991-85398010 None:intergenic 15.0%
!!! TTTAATTTTAAAGAAAAGTC+CGG + chr7.4:85398063-85398082 MS.gene91623:intron 15.0%
!! AAAATTGTACAAATAGAAGT+CGG - chr7.4:85399205-85399224 None:intergenic 20.0%
!! AAATTGAAATATAACGACTT+GGG + chr7.4:85399081-85399100 MS.gene91623:intron 20.0%
!! AATGCTTAACAATGATAATT+TGG - chr7.4:85398965-85398984 None:intergenic 20.0%
!! AGAAATAATAAATGCATATG+TGG + chr7.4:85398694-85398713 MS.gene91623:intron 20.0%
!! ATATAAAATAAGCATCATAC+TGG - chr7.4:85397794-85397813 None:intergenic 20.0%
!!! ATTATTTTTGAATACTCAGT+CGG - chr7.4:85398874-85398893 None:intergenic 20.0%
!!! GTATGATGCTTATTTTATAT+AGG + chr7.4:85397794-85397813 MS.gene91623:intron 20.0%
!!! TATTTTTACCAAATTATCCT+TGG + chr7.4:85399024-85399043 MS.gene91623:intron 20.0%
!!! TCAAATTTTAATCATAATGC+AGG + chr7.4:85397573-85397592 MS.gene91623:intron 20.0%
! AAAATCGCTCAAAATAAAGT+GGG + chr7.4:85398196-85398215 MS.gene91623:intron 25.0%
! AACCTGATATGATGAAAAAT+TGG - chr7.4:85397694-85397713 None:intergenic 25.0%
! ATAATCATCATTTATTGCTG+TGG - chr7.4:85398109-85398128 None:intergenic 25.0%
! ATCAGAAAGAGAAAAACATA+AGG + chr7.4:85398169-85398188 MS.gene91623:intron 25.0%
! ATTCAGATACAATTTACAAG+TGG - chr7.4:85397742-85397761 None:intergenic 25.0%
! ATTTCGGCTAAATAAATGTA+AGG - chr7.4:85398669-85398688 None:intergenic 25.0%
! CAAATTGAAATATAACGACT+TGG + chr7.4:85399080-85399099 MS.gene91623:intron 25.0%
! GAAAGAACATAAAAAATGAG+AGG - chr7.4:85398418-85398437 None:intergenic 25.0%
! TAAAATCGCTCAAAATAAAG+TGG + chr7.4:85398195-85398214 MS.gene91623:intron 25.0%
! TCAGAAAGAGAAAAACATAA+GGG + chr7.4:85398170-85398189 MS.gene91623:intron 25.0%
! TTGCTTGTTTCACAAATTTA+AGG + chr7.4:85398902-85398921 MS.gene91623:intron 25.0%
! TTGTAGCATCTAAATTATGT+TGG + chr7.4:85399326-85399345 MS.gene91623:intron 25.0%
! TTTCGGCTAAATAAATGTAA+GGG - chr7.4:85398668-85398687 None:intergenic 25.0%
!! ATGCATATAGTATTAGTTTG+AGG + chr7.4:85399108-85399127 MS.gene91623:intron 25.0%
!! ATGTTTTTCTCTTTCTGATT+TGG - chr7.4:85398168-85398187 None:intergenic 25.0%
!! TACCAATTTTTCATCATATC+AGG + chr7.4:85397689-85397708 MS.gene91623:intron 25.0%
!! TGATAATGTGACAATTATTG+TGG + chr7.4:85399146-85399165 MS.gene91623:intron 25.0%
!! TGCATATAGTATTAGTTTGA+GGG + chr7.4:85399109-85399128 MS.gene91623:intron 25.0%
!!! TATAGGCTTTAATAGACTTT+TGG + chr7.4:85397811-85397830 MS.gene91623:intron 25.0%
!!! TCAAACTTTTTGGTGTTTTT+TGG - chr7.4:85397981-85398000 None:intergenic 25.0%
!!! TTATTTTTGAATACTCAGTC+GGG - chr7.4:85398873-85398892 None:intergenic 25.0%
AAATCGCTCAAAATAAAGTG+GGG + chr7.4:85398197-85398216 MS.gene91623:intron 30.0%
AAATTATCCTTGGTAAGCAT+TGG + chr7.4:85399034-85399053 MS.gene91623:intron 30.0%
AATGCTTACCAAGGATAATT+TGG - chr7.4:85399035-85399054 None:intergenic 30.0%
ACCATTATCATGATGAAAGA+TGG + chr7.4:85398994-85399013 MS.gene91623:intron 30.0%
CGTGCAAATTCTTTCAAAAT+GGG + chr7.4:85398831-85398850 MS.gene91623:intron 30.0%
GATGATTATCAGTGTCAATT+TGG + chr7.4:85398120-85398139 MS.gene91623:intron 30.0%
GGGGAATATCAAAACATAAA+GGG - chr7.4:85397868-85397887 None:intergenic 30.0%
TAGTCATATAAAAAAAGCGG+CGG + chr7.4:85398337-85398356 MS.gene91623:intron 30.0%
TATGTGGCTGTAATATCATA+AGG + chr7.4:85398710-85398729 MS.gene91623:intron 30.0%
TCATGAAAACTGATAATACC+TGG - chr7.4:85398546-85398565 None:intergenic 30.0%
TCCATCTTTCATCATGATAA+TGG - chr7.4:85398998-85399017 None:intergenic 30.0%
TCTTTCAGCAAAGATTATCA+TGG + chr7.4:85398432-85398451 MS.gene91623:intron 30.0%
TGGGGAATATCAAAACATAA+AGG - chr7.4:85397869-85397888 None:intergenic 30.0%
TGTCAATTTGGAGGAAAATT+CGG + chr7.4:85398132-85398151 MS.gene91623:intron 30.0%
! AAACACCTTTTGTTCATACA+AGG + chr7.4:85398611-85398630 MS.gene91623:intron 30.0%
! TAAATTATGTTGGTTGTCAC+AGG + chr7.4:85399336-85399355 MS.gene91623:intron 30.0%
!! ATAGAGTGCTTACTTTGTTT+TGG + chr7.4:85398288-85398307 MS.gene91623:intron 30.0%
!! CATTTTGAAAGAATTTGCAC+GGG - chr7.4:85398832-85398851 None:intergenic 30.0%
!! CCATTTTGAAAGAATTTGCA+CGG - chr7.4:85398833-85398852 None:intergenic 30.0%
AAAAGGCTTAGTTGCACTTT+GGG - chr7.4:85398256-85398275 None:intergenic 35.0%
AAGTTATGAAGCCAAAACCT+CGG - chr7.4:85398477-85398496 None:intergenic 35.0%
AATCGCTCAAAATAAAGTGG+GGG + chr7.4:85398198-85398217 MS.gene91623:intron 35.0%
AATCGCTTAACTGTGATACT+TGG + chr7.4:85398226-85398245 MS.gene91623:intron 35.0%
AATTTGGAGGAAAATTCGGA+TGG + chr7.4:85398136-85398155 MS.gene91623:intron 35.0%
AGTGAACTATGCTACAGAAA+GGG + chr7.4:85399381-85399400 MS.gene91623:CDS 35.0%
ATGGCGTTCTTTGGTAAAAT+GGG + chr7.4:85397385-85397404 MS.gene91623:CDS 35.0%
ATGTGACAATTATTGTGGCA+CGG + chr7.4:85399151-85399170 MS.gene91623:intron 35.0%
ATTATCATGGATCGTGAAAC+AGG + chr7.4:85398445-85398464 MS.gene91623:CDS 35.0%
ATTCAGCAGCAACTCTAATT+TGG + chr7.4:85399690-85399709 MS.gene91623:CDS 35.0%
CAACTCCTTGTATGAACAAA+AGG - chr7.4:85398619-85398638 None:intergenic 35.0%
CATACCTCCAATAAAAAGCT+TGG - chr7.4:85397506-85397525 None:intergenic 35.0%
CCGTGCAAATTCTTTCAAAA+TGG + chr7.4:85398830-85398849 MS.gene91623:intron 35.0%
CGCAATGATTATAACAGTAG+TGG + chr7.4:85399592-85399611 MS.gene91623:CDS 35.0%
CTAAAAGTCACCAATTCACA+TGG + chr7.4:85398586-85398605 MS.gene91623:intron 35.0%
CTGATTGCTTGAAATAACGA+AGG - chr7.4:85397469-85397488 None:intergenic 35.0%
CTTTGCAAACCTCAAAATGT+TGG + chr7.4:85399294-85399313 MS.gene91623:intron 35.0%
GATTATCAGTGTCAATTTGG+AGG + chr7.4:85398123-85398142 MS.gene91623:intron 35.0%
GGAGAAGGTAAGAATGAATT+CGG + chr7.4:85399742-85399761 MS.gene91623:CDS 35.0%
TAAAAGGCTTAGTTGCACTT+TGG - chr7.4:85398257-85398276 None:intergenic 35.0%
TCAGATTGATCATTGTTCTC+TGG - chr7.4:85399793-85399812 None:intergenic 35.0%
TCCAACTTTCATAGTTAGTG+TGG + chr7.4:85397926-85397945 MS.gene91623:intron 35.0%
TGATAATACCTGGTTATCCA+TGG - chr7.4:85398536-85398555 None:intergenic 35.0%
TTCAGCAGCAACTCTAATTT+GGG + chr7.4:85399691-85399710 MS.gene91623:CDS 35.0%
TTCATTTGCTCTCATCTGTA+CGG + chr7.4:85398017-85398036 MS.gene91623:intron 35.0%
! AGCAACTCTAATTTGGGATA+TGG + chr7.4:85399697-85399716 MS.gene91623:CDS 35.0%
! AGGTGTTTTACCATGTGAAT+TGG - chr7.4:85398599-85398618 None:intergenic 35.0%
! CTTTTGTTCATACAAGGAGT+TGG + chr7.4:85398617-85398636 MS.gene91623:intron 35.0%
! GAAACATTGCCAACATTTTG+AGG - chr7.4:85399306-85399325 None:intergenic 35.0%
! GTATCACAGTTAAGCGATTT+TGG - chr7.4:85398225-85398244 None:intergenic 35.0%
! GTATTGTGATTGTGCGATTT+TGG + chr7.4:85397842-85397861 MS.gene91623:intron 35.0%
! TCATCTGCCAAGCTTTTTAT+TGG + chr7.4:85397496-85397515 MS.gene91623:CDS 35.0%
AAAAAGCTTGGCAGATGACA+TGG - chr7.4:85397494-85397513 None:intergenic 40.0%
AGTTATGAAGCCAAAACCTC+GGG - chr7.4:85398476-85398495 None:intergenic 40.0%
ATCGCACAATCACAATACTC+TGG - chr7.4:85397840-85397859 None:intergenic 40.0%
ATCGCTCAAAATAAAGTGGG+GGG + chr7.4:85398199-85398218 MS.gene91623:intron 40.0%
ATGTCCCCTTAGTGCAAATT+TGG - chr7.4:85397894-85397913 None:intergenic 40.0%
CATAGCGAGAAAAAGCTTCT+CGG - chr7.4:85397629-85397648 None:intergenic 40.0%
CATCCCAAATTTGCACTAAG+GGG + chr7.4:85397887-85397906 MS.gene91623:intron 40.0%
CCATCCCAAATTTGCACTAA+GGG + chr7.4:85397886-85397905 MS.gene91623:intron 40.0%
GAATACACCAATGCTTACCA+AGG - chr7.4:85399044-85399063 None:intergenic 40.0%
GAGTGAACTATGCTACAGAA+AGG + chr7.4:85399380-85399399 MS.gene91623:CDS 40.0%
GCCACACTAACTATGAAAGT+TGG - chr7.4:85397930-85397949 None:intergenic 40.0%
GGCACATGGTTGTTATCTAA+CGG - chr7.4:85399772-85399791 None:intergenic 40.0%
TCATTTGCTCTCATCTGTAC+GGG + chr7.4:85398018-85398037 MS.gene91623:intron 40.0%
TCGCACAATCACAATACTCT+GGG - chr7.4:85397839-85397858 None:intergenic 40.0%
TGTCCCCTTAGTGCAAATTT+GGG - chr7.4:85397893-85397912 None:intergenic 40.0%
TTGTTCATACAAGGAGTTGG+AGG + chr7.4:85398620-85398639 MS.gene91623:intron 40.0%
! CCTTAGTGCAAATTTGGGAT+GGG - chr7.4:85397888-85397907 None:intergenic 40.0%
! CTTAGTGCAAATTTGGGATG+GGG - chr7.4:85397887-85397906 None:intergenic 40.0%
! TCTGCCAAGCTTTTTATTGG+AGG + chr7.4:85397499-85397518 MS.gene91623:CDS 40.0%
!!! CATCTGTACGGGTTGATTTT+TGG + chr7.4:85398029-85398048 MS.gene91623:intron 40.0%
ATCCAACTCTGATCGTCAAC+CGG - chr7.4:85398085-85398104 None:intergenic 45.0%
CATAACTTTCGCAACTAGCG+AGG + chr7.4:85398489-85398508 MS.gene91623:CDS 45.0%
CCCATCCCAAATTTGCACTA+AGG + chr7.4:85397885-85397904 MS.gene91623:intron 45.0%
CCCTTAGTGCAAATTTGGGA+TGG - chr7.4:85397889-85397908 None:intergenic 45.0%
CGCACAATCACAATACTCTG+GGG - chr7.4:85397838-85397857 None:intergenic 45.0%
CGCTATGGAGAAGTTCTTGA+TGG + chr7.4:85397642-85397661 MS.gene91623:CDS 45.0%
CGCTTAACTGTGATACTTGG+AGG + chr7.4:85398229-85398248 MS.gene91623:intron 45.0%
GACAATTATTGTGGCACGGA+GGG + chr7.4:85399155-85399174 MS.gene91623:intron 45.0%
GATCATTGTTCTCTGGCACA+TGG - chr7.4:85399786-85399805 None:intergenic 45.0%
GCACAATCACAATACTCTGG+GGG - chr7.4:85397837-85397856 None:intergenic 45.0%
TGACAATTATTGTGGCACGG+AGG + chr7.4:85399154-85399173 MS.gene91623:intron 45.0%
TGCTGTCAAGCACATCAATC+AGG + chr7.4:85397426-85397445 MS.gene91623:CDS 45.0%
TGGTTGTCACAGGAACTTCA+TGG + chr7.4:85399346-85399365 MS.gene91623:intron 45.0%
TGTCACAGGAACTTCATGGT+CGG + chr7.4:85399350-85399369 MS.gene91623:intron 45.0%
TGTGCTTGACAGCAGAATTC+TGG - chr7.4:85397420-85397439 None:intergenic 45.0%
! AGTAGTGGAAGCTATGCAAG+TGG + chr7.4:85399607-85399626 MS.gene91623:CDS 45.0%
!! CGAGAAGCTTTTTCTCGCTA+TGG + chr7.4:85397627-85397646 MS.gene91623:CDS 45.0%
!! TATGGTGGTGGTGGTACATA+TGG + chr7.4:85399568-85399587 MS.gene91623:CDS 45.0%
AGCTATACTGGTGGCCATGT+CGG + chr7.4:85399643-85399662 MS.gene91623:CDS 50.0%
AGTGGAAGCTATGCAAGTGG+TGG + chr7.4:85399610-85399629 MS.gene91623:CDS 50.0%
ATGACTATGCTGAGACCCGT+AGG + chr7.4:85399812-85399831 MS.gene91623:CDS 50.0%
CTGCATAAGTAGTCCCGACA+TGG - chr7.4:85399660-85399679 None:intergenic 50.0%
CTTCTCCTATTCCGTCATCC+TGG - chr7.4:85399729-85399748 None:intergenic 50.0%
TATGGTAGCCACCAGGATGA+CGG + chr7.4:85399715-85399734 MS.gene91623:CDS 50.0%
TCATGGATCGTGAAACAGGC+AGG + chr7.4:85398449-85398468 MS.gene91623:CDS 50.0%
! CTGGTTATCCATGGCTTGCA+GGG - chr7.4:85398527-85398546 None:intergenic 50.0%
! TTTGGGATATGGTAGCCACC+AGG + chr7.4:85399708-85399727 MS.gene91623:CDS 50.0%
!! AATTATGGTGGCGGTGGCTA+TGG + chr7.4:85399508-85399527 MS.gene91623:CDS 50.0%
!! AGTGGCGGTGGTGGAAATTA+TGG + chr7.4:85399493-85399512 MS.gene91623:CDS 50.0%
!! CAGGATGACGGAATAGGAGA+AGG + chr7.4:85399727-85399746 MS.gene91623:CDS 50.0%
!! GGAAATTATGGTGGTGGTGG+CGG + chr7.4:85399541-85399560 MS.gene91623:CDS 50.0%
!! GGTGGTGGAAATTATGGTGG+CGG + chr7.4:85399499-85399518 MS.gene91623:CDS 50.0%
!! TTTGGTGGTGGTGGTGGTTA+TGG + chr7.4:85399415-85399434 MS.gene91623:CDS 50.0%
CCTGCAAGCCATGGATAACC+AGG + chr7.4:85398525-85398544 MS.gene91623:CDS 55.0%
CTCCTATTCCGTCATCCTGG+TGG - chr7.4:85399726-85399745 None:intergenic 55.0%
GCCACCAGTATAGCTGTCTG+GGG - chr7.4:85399638-85399657 None:intergenic 55.0%
GCTATACTGGTGGCCATGTC+GGG + chr7.4:85399644-85399663 MS.gene91623:CDS 55.0%
GGCCACCAGTATAGCTGTCT+GGG - chr7.4:85399639-85399658 None:intergenic 55.0%
GGGACTACTTATGCAGCTGG+TGG + chr7.4:85399664-85399683 MS.gene91623:CDS 55.0%
GTCCGGTTGACGATCAGAGT+TGG + chr7.4:85398080-85398099 MS.gene91623:intron 55.0%
GTCGGGACTACTTATGCAGC+TGG + chr7.4:85399661-85399680 MS.gene91623:CDS 55.0%
TGGCCACCAGTATAGCTGTC+TGG - chr7.4:85399640-85399659 None:intergenic 55.0%
! CCTGGTTATCCATGGCTTGC+AGG - chr7.4:85398528-85398547 None:intergenic 55.0%
! GAAAGGGCACGTCCTGGATT+TGG + chr7.4:85399397-85399416 MS.gene91623:CDS 55.0%
!! AGCCACCAGGATGACGGAAT+AGG + chr7.4:85399721-85399740 MS.gene91623:CDS 55.0%
!! GGCGGAAATTATGGTGGTGG+TGG + chr7.4:85399538-85399557 MS.gene91623:CDS 55.0%
!! GGCGGTGGTGGAAATTATGG+TGG + chr7.4:85399496-85399515 MS.gene91623:CDS 55.0%
!! GGTGGAAATTATGGTGGCGG+TGG + chr7.4:85399502-85399521 MS.gene91623:CDS 55.0%
!! GGTGGCGGAAATTATGGTGG+TGG + chr7.4:85399535-85399554 MS.gene91623:CDS 55.0%
!! GGTGGTGGCGGAAATTATGG+TGG + chr7.4:85399532-85399551 MS.gene91623:CDS 55.0%
!! GGTGGTGGTGGCGGAAATTA+TGG + chr7.4:85399529-85399548 MS.gene91623:CDS 55.0%
AGGGCACGTCCTGGATTTGG+TGG + chr7.4:85399400-85399419 MS.gene91623:CDS 60.0%
ATCCTCTGCCCTGCAAGCCA+TGG + chr7.4:85398516-85398535 MS.gene91623:CDS 60.0%
CCACCACCACCACCAAATCC+AGG - chr7.4:85399412-85399431 None:intergenic 60.0%
GCCCCAGACAGCTATACTGG+TGG + chr7.4:85399634-85399653 MS.gene91623:CDS 60.0%
GGTGCCCCAGACAGCTATAC+TGG + chr7.4:85399631-85399650 MS.gene91623:CDS 60.0%
! ACAGGCAGGTCCCGAGGTTT+TGG + chr7.4:85398463-85398482 MS.gene91623:CDS 60.0%
! ATCCATGGCTTGCAGGGCAG+AGG - chr7.4:85398521-85398540 None:intergenic 60.0%
! GCTACAGAAAGGGCACGTCC+TGG + chr7.4:85399391-85399410 MS.gene91623:CDS 60.0%
!! CCTGGATTTGGTGGTGGTGG+TGG + chr7.4:85399409-85399428 MS.gene91623:CDS 60.0%
!! CGTCCTGGATTTGGTGGTGG+TGG + chr7.4:85399406-85399425 MS.gene91623:CDS 60.0%
!! GCACGTCCTGGATTTGGTGG+TGG + chr7.4:85399403-85399422 MS.gene91623:CDS 60.0%
!! GGTGGTGGTGGTGGTTATGG+CGG + chr7.4:85399418-85399437 MS.gene91623:CDS 60.0%
!! TATGGTGGCGGTGGCTATGG+TGG + chr7.4:85399511-85399530 MS.gene91623:CDS 60.0%
CGTGAAACAGGCAGGTCCCG+AGG + chr7.4:85398457-85398476 MS.gene91623:CDS 65.0%
GGTGGCTATAGTGGCGGTGG+TGG + chr7.4:85399484-85399503 MS.gene91623:CDS 65.0%
GGTTATGGCGGCGGTGGCTA+TGG + chr7.4:85399430-85399449 MS.gene91623:CDS 65.0%
TATGGCGGCGGTGGCTATGG+CGG + chr7.4:85399433-85399452 MS.gene91623:CDS 65.0%
! GGTGGCGGTGGCTATAGTGG+CGG + chr7.4:85399478-85399497 MS.gene91623:CDS 65.0%
!! GGTGGCTATGGTGGTGGTGG+CGG + chr7.4:85399520-85399539 MS.gene91623:CDS 65.0%
!! GGTGGTGGCGGTGGCTATAG+TGG + chr7.4:85399475-85399494 MS.gene91623:CDS 65.0%
!! GGTGGTGGTGGTTATGGCGG+CGG + chr7.4:85399421-85399440 MS.gene91623:CDS 65.0%
GGCGGTGGCTATAGTGGCGG+TGG + chr7.4:85399481-85399500 MS.gene91623:CDS 70.0%
! GGTGGCGGTGGCTATGGTGG+TGG + chr7.4:85399514-85399533 MS.gene91623:CDS 70.0%
! GGTGGCTATGGCGGTGGTGG+CGG + chr7.4:85399442-85399461 MS.gene91623:CDS 70.0%
! GGTGGTGGTTATGGCGGCGG+TGG + chr7.4:85399424-85399443 MS.gene91623:CDS 70.0%
!! GGCGGTGGCTATGGTGGTGG+TGG + chr7.4:85399517-85399536 MS.gene91623:CDS 70.0%
GGCGGTGGCTATGGCGGTGG+TGG + chr7.4:85399439-85399458 MS.gene91623:CDS 75.0%
! GGCGGCTATGGCGGTGGTGG+CGG + chr7.4:85399463-85399482 MS.gene91623:CDS 75.0%
!! GGCTATGGCGGTGGTGGCGG+CGG + chr7.4:85399445-85399464 MS.gene91623:CDS 75.0%
!! GGCTATGGCGGTGGTGGCGG+TGG + chr7.4:85399445-85399464 MS.gene91623:CDS 75.0%
!! GGTGGTGGCGGCGGCTATGG+CGG + chr7.4:85399454-85399473 MS.gene91623:CDS 75.0%
! GGCGGCGGCTATGGCGGTGG+TGG + chr7.4:85399460-85399479 MS.gene91623:CDS 80.0%
! GGCGGCGGTGGCTATGGCGG+TGG + chr7.4:85399436-85399455 MS.gene91623:CDS 80.0%
!! GGTGGCGGCGGCTATGGCGG+TGG + chr7.4:85399457-85399476 MS.gene91623:CDS 80.0%
!!! GGCGGTGGTGGCGGCGGCTA+TGG + chr7.4:85399451-85399470 MS.gene91623:CDS 80.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 85397385 85399837 85397385 ID=MS.gene91623
chr7.4 mRNA 85397385 85399837 85397385 ID=MS.gene91623.t1;Parent=MS.gene91623
chr7.4 exon 85397385 85397520 85397385 ID=MS.gene91623.t1.exon1;Parent=MS.gene91623.t1
chr7.4 CDS 85397385 85397520 85397385 ID=cds.MS.gene91623.t1;Parent=MS.gene91623.t1
chr7.4 exon 85397595 85397663 85397595 ID=MS.gene91623.t1.exon2;Parent=MS.gene91623.t1
chr7.4 CDS 85397595 85397663 85397595 ID=cds.MS.gene91623.t1;Parent=MS.gene91623.t1
chr7.4 exon 85398440 85398546 85398440 ID=MS.gene91623.t1.exon3;Parent=MS.gene91623.t1
chr7.4 CDS 85398440 85398546 85398440 ID=cds.MS.gene91623.t1;Parent=MS.gene91623.t1
chr7.4 exon 85399358 85399837 85399358 ID=MS.gene91623.t1.exon4;Parent=MS.gene91623.t1
chr7.4 CDS 85399358 85399837 85399358 ID=cds.MS.gene91623.t1;Parent=MS.gene91623.t1
Gene Sequence

>MS.gene91623

ATGGCGTTCTTTGGTAAAATGGGAAAGTTACTCCAGAATTCTGCTGTCAAGCACATCAATCAGGATTTATCTATGTCTACTCCTTCGTTATTTCAAGCAATCAGATCCATGTCATCTGCCAAGCTTTTTATTGGAGGTATGTTAGTTTATCATGTTAAATTTTAAAAATGGAATGTAGCTATAATTTTTCAAATTTTAATCATAATGCAGGTGTTTCATATAGCACTGATGATAGTAGTCTCCGAGAAGCTTTTTCTCGCTATGGAGAAGTTCTTGATGGTAATTTTCTTTCTGACTCGCAATCTACCAATTTTTCATCATATCAGGTTGTAATATGAAATAAAACATGAGTTTCCACTTGTAAATTGTATCTGAATCTTGCATAGTGAGCTAAAGCAAAAGCAAACCAGTATGATGCTTATTTTATATAGGCTTTAATAGACTTTTGGCCCCCAGAGTATTGTGATTGTGCGATTTTGGCCCTTTATGTTTTGATATTCCCCATCCCAAATTTGCACTAAGGGGACATCATTTACTGACATCCAACTTTCATAGTTAGTGTGGCTTTTCTTTAAAATTTAATAATAAAAACGCCAAAAAACACCAAAAAGTTTGAATTTCTAATTAGAGATTTCATTTGCTCTCATCTGTACGGGTTGATTTTTGGTGTTTTTAATATTTAATTTTAAAGAAAAGTCCGGTTGACGATCAGAGTTGGATGCCACAGCAATAAATGATGATTATCAGTGTCAATTTGGAGGAAAATTCGGATGGAGACTACCAAATCAGAAAGAGAAAAACATAAGGGACTAAAATCGCTCAAAATAAAGTGGGGGGCCAAAATCGCTTAACTGTGATACTTGGAGGACCCAAAGTGCAACTAAGCCTTTTATATATGATTTGATAGAGTGCTTACTTTGTTTTGGTAAAAGATAATTTTCATTGAAAGTAATAGTCATATAAAAAAAGCGGCGGCTGTGATAAGCATATGTATTTCATGATATTGTGATTATTGATTTCTGCACTGAAACCTCTCATTTTTTATGTTCTTTCAGCAAAGATTATCATGGATCGTGAAACAGGCAGGTCCCGAGGTTTTGGCTTCATAACTTTCGCAACTAGCGAGGAAGCATCCTCTGCCCTGCAAGCCATGGATAACCAGGTATTATCAGTTTTCATGATGATTTCATCTTGCTAAATTCTAAAAGTCACCAATTCACATGGTAAAACACCTTTTGTTCATACAAGGAGTTGGAGGAAGCAATTACATGATAGAAAAACCCTTACATTTATTTAGCCGAAATAAGTTAGAAATAATAAATGCATATGTGGCTGTAATATCATAAGGTATTCTCTTTGTTAATGATTCTTTGTTCTACATAATTTGTTTTTACATTTTTTAGATCTCTTGAAGAATATATTTAAAAAGGATGATATTAGAGAACCCGTGCAAATTCTTTCAAAATGGGAATTAGATTTCAAAAGCCCGACTGAGTATTCAAAAATAATTTGCATACTTGCTTGTTTCACAAATTTAAGGAAAAACTATTGATGAAAGATAGAGAATATTATTTTTACCAAATTATCATTGTTAAGCATTGTTGTATTCACCATTATCATGATGAAAGATGGAGAATATTATTTTTACCAAATTATCCTTGGTAAGCATTGGTGTATTCACCATTATCATAAATTCAAATTGAAATATAACGACTTGGGAATGATGCATATAGTATTAGTTTGAGGGTAATAGTAGTTTTGTGATAATGTGACAATTATTGTGGCACGGAGGGAGCAAGATCTAGTAAAACATTTTACCGACTTCTATTTGTACAATTTTTTATATGGCAGTTGTCTTAGAATTTCACTTACAACTAATTGTTTATTTCAATTGACTCATTTTGTTGCTCTTTGCAAACCTCAAAATGTTGGCAATGTTTCTTGTAGCATCTAAATTATGTTGGTTGTCACAGGAACTTCATGGTCGGACAGTACGAGTGAACTATGCTACAGAAAGGGCACGTCCTGGATTTGGTGGTGGTGGTGGTTATGGCGGCGGTGGCTATGGCGGTGGTGGCGGCGGCTATGGCGGTGGTGGCGGTGGCTATAGTGGCGGTGGTGGAAATTATGGTGGCGGTGGCTATGGTGGTGGTGGCGGAAATTATGGTGGTGGTGGCGGAAATTATGGTGGTGGTGGTACATATGGTCGCAATGATTATAACAGTAGTGGAAGCTATGCAAGTGGTGGTGCCCCAGACAGCTATACTGGTGGCCATGTCGGGACTACTTATGCAGCTGGTGGTGAATTCAGCAGCAACTCTAATTTGGGATATGGTAGCCACCAGGATGACGGAATAGGAGAAGGTAAGAATGAATTCGGTGAGCCGTTAGATAACAACCATGTGCCAGAGAACAATGATCAATCTGATGACTATGCTGAGACCCGTAGGTGA
Protein sequence

>MS.gene91623.t1

MAFFGKMGKLLQNSAVKHINQDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDDSSLREAFSRYGEVLDAKIIMDRETGRSRGFGFITFATSEEASSALQAMDNQELHGRTVRVNYATERARPGFGGGGGYGGGGYGGGGGGYGGGGGGYSGGGGNYGGGGYGGGGGNYGGGGGNYGGGGTYGRNDYNSSGSYASGGAPDSYTGGHVGTTYAAGGEFSSNSNLGYGSHQDDGIGEGKNEFGEPLDNNHVPENNDQSDDYAETRR