Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91824.t1 | XP_003626706.2 | 94.7 | 378 | 16 | 4 | 1 | 378 | 1 | 374 | 3.60E-188 | 667.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91824.t1 | Q9M0B8 | 50.5 | 366 | 170 | 4 | 13 | 376 | 1 | 357 | 8.8e-95 | 348.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91824.t1 | G7LBL0 | 94.7 | 378 | 16 | 4 | 1 | 378 | 1 | 374 | 2.6e-188 | 667.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91824 | MS.gene012466 | PPI |
| MS.gene33586 | MS.gene91824 | PPI |
| MS.gene91824 | MS.gene039955 | PPI |
| MS.gene62998 | MS.gene91824 | PPI |
| MS.gene91824 | MS.gene026616 | PPI |
| MS.gene007962 | MS.gene91824 | PPI |
| MS.gene57955 | MS.gene91824 | PPI |
| MS.gene65952 | MS.gene91824 | PPI |
| MS.gene018396 | MS.gene91824 | PPI |
| MS.gene035645 | MS.gene91824 | PPI |
| MS.gene91824 | MS.gene99888 | PPI |
| MS.gene031882 | MS.gene91824 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91824.t1 | MTR_8g006120 | 94.709 | 378 | 16 | 4 | 1 | 378 | 1 | 374 | 0.0 | 662 |
| MS.gene91824.t1 | MTR_2g065550 | 73.016 | 378 | 93 | 7 | 1 | 377 | 1 | 370 | 0.0 | 534 |
| MS.gene91824.t1 | MTR_8g006010 | 67.200 | 375 | 118 | 5 | 1 | 375 | 1 | 370 | 6.31e-176 | 494 |
| MS.gene91824.t1 | MTR_8g006090 | 71.989 | 357 | 97 | 2 | 4 | 360 | 5 | 358 | 6.34e-169 | 476 |
| MS.gene91824.t1 | MTR_8g006050 | 66.223 | 376 | 87 | 8 | 3 | 376 | 4 | 341 | 8.82e-167 | 470 |
| MS.gene91824.t1 | MTR_8g006090 | 74.183 | 306 | 77 | 1 | 4 | 309 | 5 | 308 | 8.12e-150 | 426 |
| MS.gene91824.t1 | MTR_8g006090 | 72.598 | 281 | 74 | 2 | 80 | 360 | 1 | 278 | 1.93e-125 | 362 |
| MS.gene91824.t1 | MTR_4g129650 | 48.525 | 373 | 169 | 6 | 6 | 376 | 4 | 355 | 8.18e-119 | 349 |
| MS.gene91824.t1 | MTR_8g006090 | 74.502 | 251 | 62 | 1 | 4 | 254 | 5 | 253 | 4.14e-116 | 339 |
| MS.gene91824.t1 | MTR_4g129650 | 47.584 | 269 | 120 | 5 | 108 | 376 | 1 | 248 | 1.65e-79 | 245 |
| MS.gene91824.t1 | MTR_3g112480 | 37.093 | 399 | 210 | 7 | 1 | 378 | 11 | 389 | 1.54e-76 | 242 |
| MS.gene91824.t1 | MTR_6g081840 | 38.617 | 347 | 206 | 3 | 19 | 363 | 19 | 360 | 9.12e-76 | 239 |
| MS.gene91824.t1 | MTR_8g006090 | 76.571 | 175 | 39 | 1 | 80 | 254 | 1 | 173 | 3.66e-73 | 227 |
| MS.gene91824.t1 | MTR_2g016710 | 36.705 | 346 | 207 | 3 | 7 | 352 | 5 | 338 | 4.74e-71 | 226 |
| MS.gene91824.t1 | MTR_8g041390 | 35.230 | 369 | 226 | 8 | 5 | 367 | 11 | 372 | 3.21e-70 | 225 |
| MS.gene91824.t1 | MTR_1g023180 | 34.783 | 368 | 218 | 3 | 1 | 352 | 12 | 373 | 5.07e-70 | 225 |
| MS.gene91824.t1 | MTR_3g012420 | 38.095 | 336 | 198 | 6 | 11 | 343 | 18 | 346 | 8.73e-70 | 224 |
| MS.gene91824.t1 | MTR_1g074120 | 37.952 | 332 | 200 | 3 | 9 | 339 | 15 | 341 | 1.40e-67 | 218 |
| MS.gene91824.t1 | MTR_1g073990 | 39.831 | 354 | 201 | 6 | 9 | 361 | 15 | 357 | 2.49e-67 | 217 |
| MS.gene91824.t1 | MTR_2g007960 | 35.928 | 334 | 195 | 4 | 11 | 332 | 13 | 339 | 1.76e-66 | 216 |
| MS.gene91824.t1 | MTR_1g074070 | 36.202 | 337 | 209 | 3 | 4 | 339 | 10 | 341 | 2.08e-66 | 214 |
| MS.gene91824.t1 | MTR_1g030580 | 36.415 | 357 | 215 | 5 | 11 | 362 | 17 | 366 | 1.31e-65 | 213 |
| MS.gene91824.t1 | MTR_1g038560 | 34.503 | 342 | 215 | 3 | 11 | 352 | 4 | 336 | 1.49e-65 | 212 |
| MS.gene91824.t1 | MTR_1g074160 | 37.349 | 332 | 202 | 4 | 9 | 339 | 12 | 338 | 2.36e-65 | 211 |
| MS.gene91824.t1 | MTR_6g036450 | 34.421 | 337 | 213 | 4 | 6 | 339 | 12 | 343 | 3.75e-65 | 211 |
| MS.gene91824.t1 | MTR_3g112480 | 37.618 | 319 | 165 | 5 | 78 | 378 | 32 | 334 | 3.84e-65 | 211 |
| MS.gene91824.t1 | MTR_3g072500 | 32.967 | 364 | 230 | 5 | 11 | 363 | 21 | 381 | 4.64e-64 | 209 |
| MS.gene91824.t1 | MTR_2g102340 | 37.931 | 319 | 193 | 3 | 15 | 332 | 17 | 331 | 5.83e-64 | 208 |
| MS.gene91824.t1 | MTR_1g114210 | 34.441 | 331 | 213 | 2 | 11 | 341 | 12 | 338 | 6.80e-64 | 207 |
| MS.gene91824.t1 | MTR_3g095420 | 33.537 | 328 | 215 | 2 | 11 | 335 | 8 | 335 | 2.34e-63 | 207 |
| MS.gene91824.t1 | MTR_1g070175 | 34.036 | 332 | 212 | 3 | 7 | 338 | 13 | 337 | 3.85e-63 | 206 |
| MS.gene91824.t1 | MTR_1g051120 | 34.971 | 346 | 217 | 5 | 9 | 352 | 15 | 354 | 3.35e-62 | 203 |
| MS.gene91824.t1 | MTR_1g068630 | 33.945 | 327 | 210 | 4 | 6 | 331 | 11 | 332 | 3.87e-62 | 204 |
| MS.gene91824.t1 | MTR_0096s0100 | 35.890 | 326 | 204 | 3 | 7 | 331 | 15 | 336 | 5.93e-61 | 201 |
| MS.gene91824.t1 | MTR_7g100050 | 35.404 | 322 | 204 | 3 | 11 | 331 | 14 | 332 | 7.38e-61 | 201 |
| MS.gene91824.t1 | MTR_1g074020 | 37.126 | 334 | 204 | 3 | 11 | 343 | 14 | 342 | 2.18e-60 | 199 |
| MS.gene91824.t1 | MTR_3g072530 | 34.831 | 356 | 214 | 6 | 5 | 352 | 9 | 354 | 2.42e-60 | 199 |
| MS.gene91824.t1 | MTR_2g016710 | 36.304 | 303 | 188 | 2 | 7 | 309 | 5 | 302 | 4.22e-60 | 197 |
| MS.gene91824.t1 | MTR_2g007990 | 33.333 | 342 | 202 | 5 | 11 | 341 | 16 | 342 | 5.90e-60 | 199 |
| MS.gene91824.t1 | MTR_2g027030 | 34.211 | 342 | 214 | 4 | 6 | 344 | 8 | 341 | 2.74e-59 | 196 |
| MS.gene91824.t1 | MTR_7g111830 | 32.132 | 333 | 210 | 4 | 10 | 332 | 7 | 333 | 2.98e-59 | 196 |
| MS.gene91824.t1 | MTR_5g021160 | 32.659 | 346 | 222 | 3 | 13 | 350 | 10 | 352 | 8.00e-59 | 195 |
| MS.gene91824.t1 | MTR_4g106720 | 34.018 | 341 | 201 | 5 | 4 | 331 | 1 | 330 | 4.14e-58 | 193 |
| MS.gene91824.t1 | MTR_1g030600 | 35.671 | 328 | 209 | 2 | 18 | 344 | 26 | 352 | 4.19e-58 | 194 |
| MS.gene91824.t1 | MTR_2g007970 | 33.425 | 362 | 230 | 5 | 11 | 370 | 13 | 365 | 4.52e-58 | 194 |
| MS.gene91824.t1 | MTR_3g095450 | 33.923 | 339 | 199 | 5 | 11 | 335 | 6 | 333 | 1.28e-57 | 192 |
| MS.gene91824.t1 | MTR_3g095460 | 32.931 | 331 | 218 | 3 | 11 | 339 | 6 | 334 | 4.11e-57 | 190 |
| MS.gene91824.t1 | MTR_8g092650 | 34.356 | 326 | 207 | 3 | 11 | 331 | 6 | 329 | 2.69e-56 | 188 |
| MS.gene91824.t1 | MTR_4g094342 | 32.722 | 327 | 216 | 2 | 3 | 326 | 6 | 331 | 7.88e-56 | 187 |
| MS.gene91824.t1 | MTR_3g072560 | 33.067 | 375 | 231 | 6 | 11 | 374 | 19 | 384 | 1.18e-55 | 187 |
| MS.gene91824.t1 | MTR_3g090550 | 33.429 | 347 | 219 | 6 | 10 | 352 | 6 | 344 | 1.36e-55 | 186 |
| MS.gene91824.t1 | MTR_4g094352 | 33.780 | 373 | 232 | 5 | 11 | 373 | 13 | 380 | 8.57e-55 | 185 |
| MS.gene91824.t1 | MTR_4g094340 | 31.714 | 350 | 223 | 5 | 11 | 354 | 10 | 349 | 1.53e-54 | 183 |
| MS.gene91824.t1 | MTR_4g094340 | 31.714 | 350 | 223 | 5 | 11 | 354 | 28 | 367 | 2.31e-54 | 184 |
| MS.gene91824.t1 | MTR_3g112480 | 36.331 | 278 | 143 | 5 | 119 | 378 | 1 | 262 | 4.44e-53 | 177 |
| MS.gene91824.t1 | MTR_2g007260 | 32.861 | 353 | 213 | 5 | 11 | 352 | 15 | 354 | 2.12e-52 | 179 |
| MS.gene91824.t1 | MTR_3g072500 | 34.340 | 265 | 166 | 3 | 96 | 354 | 2 | 264 | 5.04e-51 | 172 |
| MS.gene91824.t1 | MTR_0103s0090 | 34.356 | 326 | 210 | 2 | 10 | 335 | 11 | 332 | 5.15e-51 | 174 |
| MS.gene91824.t1 | MTR_4g094362 | 33.841 | 328 | 212 | 3 | 6 | 331 | 10 | 334 | 8.86e-51 | 174 |
| MS.gene91824.t1 | MTR_3g072520 | 33.851 | 322 | 211 | 2 | 11 | 331 | 10 | 330 | 5.40e-50 | 172 |
| MS.gene91824.t1 | MTR_3g095440 | 32.277 | 347 | 222 | 4 | 11 | 352 | 6 | 344 | 6.77e-50 | 171 |
| MS.gene91824.t1 | MTR_5g034990 | 33.129 | 326 | 211 | 3 | 10 | 335 | 14 | 332 | 9.74e-50 | 171 |
| MS.gene91824.t1 | MTR_4g094360 | 33.628 | 339 | 215 | 4 | 6 | 341 | 10 | 341 | 2.23e-49 | 171 |
| MS.gene91824.t1 | MTR_4g094340 | 34.815 | 270 | 162 | 4 | 88 | 351 | 19 | 280 | 1.27e-48 | 166 |
| MS.gene91824.t1 | MTR_3g019050 | 31.056 | 322 | 218 | 3 | 12 | 332 | 20 | 338 | 4.41e-47 | 165 |
| MS.gene91824.t1 | MTR_1g030400 | 28.527 | 319 | 221 | 4 | 19 | 332 | 16 | 332 | 6.76e-47 | 164 |
| MS.gene91824.t1 | MTR_5g025370 | 30.055 | 366 | 232 | 6 | 13 | 356 | 13 | 376 | 2.29e-46 | 163 |
| MS.gene91824.t1 | MTR_5g068790 | 30.650 | 323 | 220 | 3 | 12 | 332 | 20 | 340 | 3.84e-46 | 162 |
| MS.gene91824.t1 | MTR_5g069040 | 29.630 | 324 | 224 | 3 | 12 | 332 | 20 | 342 | 2.46e-45 | 160 |
| MS.gene91824.t1 | MTR_5g025290 | 31.642 | 335 | 208 | 7 | 13 | 331 | 14 | 343 | 3.96e-45 | 159 |
| MS.gene91824.t1 | MTR_5g025290 | 31.437 | 334 | 210 | 6 | 13 | 331 | 42 | 371 | 5.17e-45 | 160 |
| MS.gene91824.t1 | MTR_5g021160 | 30.483 | 269 | 181 | 1 | 88 | 350 | 1 | 269 | 2.61e-43 | 152 |
| MS.gene91824.t1 | MTR_5g089390 | 29.630 | 324 | 210 | 4 | 14 | 332 | 18 | 328 | 3.67e-43 | 154 |
| MS.gene91824.t1 | MTR_5g025330 | 29.360 | 344 | 226 | 4 | 13 | 341 | 12 | 353 | 4.05e-43 | 158 |
| MS.gene91824.t1 | MTR_8g092650 | 34.802 | 227 | 142 | 2 | 110 | 331 | 26 | 251 | 4.95e-43 | 151 |
| MS.gene91824.t1 | MTR_6g007760 | 33.758 | 314 | 196 | 5 | 2 | 311 | 4 | 309 | 9.64e-43 | 151 |
| MS.gene91824.t1 | MTR_5g025340 | 28.534 | 382 | 247 | 6 | 1 | 360 | 1 | 378 | 9.67e-43 | 153 |
| MS.gene91824.t1 | MTR_0103s0090 | 35.537 | 242 | 153 | 1 | 94 | 335 | 3 | 241 | 1.35e-42 | 150 |
| MS.gene91824.t1 | MTR_5g025400 | 30.058 | 346 | 223 | 6 | 13 | 341 | 14 | 357 | 3.43e-42 | 152 |
| MS.gene91824.t1 | MTR_4g094360 | 32.781 | 302 | 197 | 3 | 11 | 309 | 15 | 313 | 1.52e-40 | 145 |
| MS.gene91824.t1 | MTR_5g034910 | 30.514 | 331 | 225 | 3 | 15 | 344 | 12 | 338 | 1.63e-40 | 146 |
| MS.gene91824.t1 | MTR_5g034980 | 29.866 | 298 | 204 | 3 | 35 | 331 | 32 | 325 | 5.16e-40 | 145 |
| MS.gene91824.t1 | MTR_8g072350 | 28.916 | 332 | 219 | 5 | 14 | 331 | 13 | 341 | 5.34e-40 | 146 |
| MS.gene91824.t1 | MTR_4g094360 | 34.375 | 256 | 163 | 2 | 87 | 341 | 43 | 294 | 6.84e-40 | 145 |
| MS.gene91824.t1 | MTR_3g072500 | 33.054 | 239 | 155 | 3 | 11 | 247 | 21 | 256 | 1.82e-39 | 142 |
| MS.gene91824.t1 | MTR_5g034930 | 29.874 | 318 | 218 | 3 | 15 | 331 | 11 | 324 | 4.82e-39 | 142 |
| MS.gene91824.t1 | MTR_6g007743 | 30.769 | 312 | 205 | 4 | 34 | 342 | 36 | 339 | 6.46e-39 | 142 |
| MS.gene91824.t1 | MTR_1g074160 | 34.800 | 250 | 157 | 4 | 11 | 259 | 14 | 258 | 1.40e-37 | 136 |
| MS.gene91824.t1 | MTR_1g014510 | 30.909 | 330 | 212 | 5 | 10 | 331 | 11 | 332 | 1.89e-37 | 140 |
| MS.gene91824.t1 | MTR_5g021160 | 31.727 | 249 | 165 | 2 | 13 | 259 | 10 | 255 | 2.42e-37 | 136 |
| MS.gene91824.t1 | MTR_6g007747 | 35.197 | 304 | 185 | 4 | 34 | 335 | 36 | 329 | 1.00e-36 | 137 |
| MS.gene91824.t1 | MTR_2g102340 | 36.752 | 234 | 143 | 3 | 15 | 247 | 43 | 272 | 2.42e-36 | 135 |
| MS.gene91824.t1 | MTR_5g012650 | 29.341 | 334 | 221 | 6 | 12 | 338 | 10 | 335 | 2.73e-35 | 132 |
| MS.gene91824.t1 | MTR_6g007750 | 31.707 | 328 | 217 | 4 | 10 | 335 | 12 | 334 | 2.23e-34 | 130 |
| MS.gene91824.t1 | MTR_6g007740 | 29.674 | 337 | 226 | 4 | 9 | 342 | 11 | 339 | 4.88e-33 | 129 |
| MS.gene91824.t1 | MTR_3g095440 | 30.830 | 253 | 168 | 3 | 11 | 258 | 6 | 256 | 7.73e-32 | 121 |
| MS.gene91824.t1 | MTR_6g007757 | 32.440 | 336 | 204 | 7 | 34 | 362 | 36 | 355 | 5.09e-31 | 121 |
| MS.gene91824.t1 | MTR_4g100840 | 25.356 | 351 | 242 | 6 | 6 | 345 | 10 | 351 | 1.03e-30 | 120 |
| MS.gene91824.t1 | MTR_6g007753 | 31.488 | 289 | 190 | 3 | 49 | 335 | 333 | 615 | 2.48e-30 | 122 |
| MS.gene91824.t1 | MTR_6g007753 | 30.040 | 253 | 163 | 4 | 123 | 369 | 84 | 328 | 1.79e-24 | 105 |
| MS.gene91824.t1 | MTR_5g034970 | 28.213 | 319 | 211 | 4 | 14 | 331 | 11 | 312 | 2.82e-30 | 119 |
| MS.gene91824.t1 | MTR_4g094340 | 31.557 | 244 | 154 | 4 | 11 | 248 | 10 | 246 | 1.95e-29 | 115 |
| MS.gene91824.t1 | MTR_4g094340 | 31.557 | 244 | 154 | 4 | 11 | 248 | 28 | 264 | 2.61e-29 | 115 |
| MS.gene91824.t1 | MTR_3g072500 | 32.663 | 199 | 129 | 3 | 11 | 207 | 21 | 216 | 6.67e-29 | 112 |
| MS.gene91824.t1 | MTR_3g072530 | 30.824 | 279 | 142 | 6 | 11 | 247 | 15 | 284 | 1.88e-28 | 113 |
| MS.gene91824.t1 | MTR_1g052205 | 26.613 | 248 | 159 | 4 | 125 | 359 | 14 | 251 | 4.96e-27 | 108 |
| MS.gene91824.t1 | MTR_1g051120 | 31.818 | 198 | 130 | 3 | 11 | 207 | 17 | 210 | 5.42e-25 | 101 |
| MS.gene91824.t1 | MTR_4g094342 | 30.374 | 214 | 145 | 2 | 3 | 213 | 6 | 218 | 5.60e-25 | 102 |
| MS.gene91824.t1 | MTR_1g051120 | 31.156 | 199 | 132 | 3 | 9 | 206 | 15 | 209 | 5.85e-24 | 100 |
| MS.gene91824.t1 | MTR_4g094340 | 32.020 | 203 | 125 | 4 | 11 | 207 | 28 | 223 | 3.18e-23 | 97.1 |
| MS.gene91824.t1 | MTR_5g034980 | 29.302 | 215 | 147 | 3 | 35 | 248 | 32 | 242 | 9.08e-20 | 89.0 |
| MS.gene91824.t1 | MTR_6g007757 | 32.127 | 221 | 131 | 5 | 34 | 247 | 36 | 244 | 4.54e-19 | 86.7 |
| MS.gene91824.t1 | MTR_4g094348 | 34.127 | 126 | 72 | 2 | 91 | 207 | 2 | 125 | 5.51e-16 | 75.5 |
| MS.gene91824.t1 | MTR_1g014790 | 37.795 | 127 | 65 | 3 | 94 | 213 | 46 | 165 | 2.71e-14 | 71.6 |
| MS.gene91824.t1 | MTR_3g093450 | 27.692 | 195 | 88 | 6 | 144 | 328 | 25 | 176 | 1.37e-11 | 63.5 |
| MS.gene91824.t1 | MTR_1g068720 | 32.000 | 125 | 78 | 3 | 212 | 331 | 101 | 223 | 4.31e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91824.t1 | AT4G30420 | 50.267 | 374 | 175 | 4 | 5 | 376 | 3 | 367 | 3.56e-131 | 381 |
| MS.gene91824.t1 | AT4G30420 | 50.546 | 366 | 170 | 4 | 13 | 376 | 1 | 357 | 1.82e-128 | 374 |
| MS.gene91824.t1 | AT4G28040 | 42.133 | 375 | 198 | 5 | 4 | 376 | 1 | 358 | 5.35e-101 | 303 |
| MS.gene91824.t1 | AT4G28040 | 42.133 | 375 | 198 | 5 | 4 | 376 | 1 | 358 | 5.35e-101 | 303 |
| MS.gene91824.t1 | AT4G28040 | 42.133 | 375 | 198 | 5 | 4 | 376 | 1 | 358 | 5.35e-101 | 303 |
| MS.gene91824.t1 | AT4G28040 | 42.133 | 375 | 198 | 5 | 4 | 376 | 1 | 358 | 5.35e-101 | 303 |
| MS.gene91824.t1 | AT4G28040 | 42.133 | 375 | 198 | 5 | 4 | 376 | 1 | 358 | 5.35e-101 | 303 |
| MS.gene91824.t1 | AT1G75500 | 38.855 | 332 | 197 | 2 | 13 | 339 | 22 | 352 | 1.87e-76 | 241 |
| MS.gene91824.t1 | AT1G75500 | 38.855 | 332 | 197 | 2 | 13 | 339 | 22 | 352 | 1.87e-76 | 241 |
| MS.gene91824.t1 | AT3G18200 | 36.261 | 353 | 217 | 4 | 12 | 362 | 36 | 382 | 5.08e-75 | 238 |
| MS.gene91824.t1 | AT3G53210 | 39.432 | 317 | 190 | 2 | 13 | 329 | 12 | 326 | 1.25e-71 | 228 |
| MS.gene91824.t1 | AT4G08300 | 33.422 | 377 | 238 | 5 | 1 | 369 | 1 | 372 | 8.48e-70 | 224 |
| MS.gene91824.t1 | AT1G21890 | 36.890 | 328 | 199 | 2 | 11 | 331 | 11 | 337 | 2.53e-67 | 218 |
| MS.gene91824.t1 | AT1G09380 | 35.202 | 321 | 205 | 2 | 10 | 328 | 7 | 326 | 7.24e-64 | 208 |
| MS.gene91824.t1 | AT5G64700 | 35.519 | 366 | 213 | 7 | 4 | 359 | 1 | 353 | 9.26e-64 | 207 |
| MS.gene91824.t1 | AT1G44800 | 32.869 | 359 | 231 | 4 | 1 | 354 | 1 | 354 | 5.01e-63 | 206 |
| MS.gene91824.t1 | AT2G37460 | 33.239 | 352 | 221 | 5 | 6 | 355 | 10 | 349 | 6.97e-63 | 206 |
| MS.gene91824.t1 | AT2G39510 | 33.739 | 329 | 214 | 3 | 4 | 331 | 1 | 326 | 2.48e-62 | 204 |
| MS.gene91824.t1 | AT2G40900 | 33.434 | 332 | 212 | 4 | 11 | 341 | 11 | 334 | 5.07e-61 | 201 |
| MS.gene91824.t1 | AT5G07050 | 34.072 | 361 | 210 | 7 | 11 | 354 | 18 | 367 | 5.71e-61 | 202 |
| MS.gene91824.t1 | AT3G53210 | 41.393 | 244 | 142 | 1 | 86 | 329 | 27 | 269 | 7.09e-61 | 199 |
| MS.gene91824.t1 | AT4G08290 | 34.153 | 366 | 230 | 4 | 6 | 364 | 8 | 369 | 1.70e-59 | 197 |
| MS.gene91824.t1 | AT5G13670 | 33.431 | 341 | 201 | 6 | 4 | 331 | 1 | 328 | 7.54e-59 | 196 |
| MS.gene91824.t1 | AT1G43650 | 33.432 | 338 | 217 | 3 | 13 | 349 | 9 | 339 | 1.41e-58 | 194 |
| MS.gene91824.t1 | AT3G56620 | 33.648 | 318 | 204 | 3 | 11 | 328 | 11 | 321 | 1.12e-56 | 190 |
| MS.gene91824.t1 | AT1G21890 | 35.294 | 306 | 190 | 2 | 11 | 309 | 11 | 315 | 1.49e-55 | 186 |
| MS.gene91824.t1 | AT3G18200 | 39.076 | 238 | 138 | 3 | 108 | 343 | 1 | 233 | 3.51e-55 | 182 |
| MS.gene91824.t1 | AT5G40230 | 32.231 | 363 | 235 | 5 | 3 | 362 | 16 | 370 | 8.63e-53 | 179 |
| MS.gene91824.t1 | AT3G30340 | 30.769 | 338 | 228 | 3 | 4 | 339 | 4 | 337 | 1.20e-52 | 179 |
| MS.gene91824.t1 | AT1G11450 | 33.784 | 296 | 185 | 4 | 45 | 336 | 6 | 294 | 1.60e-52 | 177 |
| MS.gene91824.t1 | AT3G28050 | 33.962 | 371 | 222 | 8 | 10 | 371 | 11 | 367 | 2.14e-52 | 178 |
| MS.gene91824.t1 | AT1G11450 | 33.115 | 305 | 193 | 4 | 36 | 336 | 41 | 338 | 3.06e-52 | 177 |
| MS.gene91824.t1 | AT4G01440 | 31.548 | 336 | 217 | 5 | 9 | 339 | 8 | 335 | 4.10e-52 | 177 |
| MS.gene91824.t1 | AT5G40240 | 31.988 | 347 | 231 | 4 | 10 | 353 | 19 | 363 | 2.37e-51 | 176 |
| MS.gene91824.t1 | AT5G40240 | 31.988 | 347 | 231 | 4 | 10 | 353 | 19 | 363 | 2.37e-51 | 176 |
| MS.gene91824.t1 | AT1G11460 | 32.845 | 341 | 210 | 7 | 1 | 332 | 5 | 335 | 2.75e-51 | 174 |
| MS.gene91824.t1 | AT5G40240 | 31.988 | 347 | 231 | 4 | 10 | 353 | 33 | 377 | 3.73e-51 | 176 |
| MS.gene91824.t1 | AT1G11450 | 33.447 | 293 | 184 | 4 | 48 | 336 | 2 | 287 | 7.87e-51 | 172 |
| MS.gene91824.t1 | AT1G01070 | 32.416 | 327 | 218 | 3 | 6 | 331 | 11 | 335 | 4.29e-50 | 172 |
| MS.gene91824.t1 | AT3G53210 | 37.398 | 246 | 152 | 2 | 13 | 258 | 12 | 255 | 9.24e-50 | 168 |
| MS.gene91824.t1 | AT4G01430 | 29.050 | 358 | 245 | 4 | 7 | 359 | 5 | 358 | 6.80e-49 | 169 |
| MS.gene91824.t1 | AT5G47470 | 31.871 | 342 | 217 | 5 | 1 | 337 | 20 | 350 | 1.26e-48 | 168 |
| MS.gene91824.t1 | AT5G47470 | 31.871 | 342 | 217 | 5 | 1 | 337 | 48 | 378 | 1.60e-48 | 169 |
| MS.gene91824.t1 | AT5G47470 | 31.871 | 342 | 217 | 5 | 1 | 337 | 48 | 378 | 1.61e-48 | 169 |
| MS.gene91824.t1 | AT2G37450 | 33.033 | 333 | 192 | 6 | 1 | 331 | 1 | 304 | 2.31e-47 | 164 |
| MS.gene91824.t1 | AT4G15540 | 33.140 | 344 | 216 | 3 | 10 | 352 | 16 | 346 | 4.92e-46 | 161 |
| MS.gene91824.t1 | AT4G15540 | 33.140 | 344 | 216 | 3 | 10 | 352 | 16 | 346 | 4.92e-46 | 161 |
| MS.gene91824.t1 | AT4G01440 | 30.421 | 309 | 202 | 5 | 9 | 312 | 8 | 308 | 8.72e-46 | 159 |
| MS.gene91824.t1 | AT1G11450 | 33.871 | 248 | 160 | 2 | 90 | 336 | 2 | 246 | 9.78e-46 | 158 |
| MS.gene91824.t1 | AT1G01070 | 35.294 | 255 | 163 | 2 | 79 | 332 | 36 | 289 | 4.50e-45 | 158 |
| MS.gene91824.t1 | AT5G45370 | 29.912 | 341 | 222 | 5 | 5 | 331 | 14 | 351 | 3.52e-44 | 157 |
| MS.gene91824.t1 | AT5G45370 | 29.912 | 341 | 222 | 5 | 5 | 331 | 14 | 351 | 3.52e-44 | 157 |
| MS.gene91824.t1 | AT5G45370 | 29.878 | 328 | 215 | 5 | 5 | 331 | 14 | 327 | 1.61e-42 | 152 |
| MS.gene91824.t1 | AT1G11450 | 31.655 | 278 | 179 | 4 | 36 | 309 | 41 | 311 | 2.08e-41 | 148 |
| MS.gene91824.t1 | AT1G70260 | 28.614 | 339 | 231 | 5 | 10 | 341 | 11 | 345 | 6.41e-41 | 148 |
| MS.gene91824.t1 | AT3G45870 | 29.217 | 332 | 224 | 3 | 4 | 326 | 5 | 334 | 9.99e-41 | 148 |
| MS.gene91824.t1 | AT5G64700 | 34.340 | 265 | 158 | 6 | 4 | 258 | 1 | 259 | 7.68e-40 | 142 |
| MS.gene91824.t1 | AT1G68170 | 30.341 | 323 | 221 | 3 | 12 | 332 | 14 | 334 | 4.52e-39 | 143 |
| MS.gene91824.t1 | AT4G01430 | 28.662 | 314 | 221 | 3 | 7 | 318 | 5 | 317 | 5.21e-39 | 142 |
| MS.gene91824.t1 | AT1G68170 | 30.341 | 323 | 221 | 3 | 12 | 332 | 4 | 324 | 7.20e-39 | 142 |
| MS.gene91824.t1 | AT4G19185 | 29.003 | 331 | 220 | 4 | 14 | 331 | 24 | 352 | 3.46e-38 | 141 |
| MS.gene91824.t1 | AT5G40210 | 30.061 | 326 | 203 | 5 | 14 | 336 | 16 | 319 | 3.22e-37 | 137 |
| MS.gene91824.t1 | AT1G60050 | 27.322 | 366 | 256 | 5 | 7 | 363 | 9 | 373 | 5.81e-37 | 137 |
| MS.gene91824.t1 | AT4G01440 | 31.169 | 231 | 153 | 2 | 111 | 339 | 1 | 227 | 7.90e-37 | 134 |
| MS.gene91824.t1 | AT4G01440 | 31.169 | 231 | 153 | 2 | 111 | 339 | 1 | 227 | 7.90e-37 | 134 |
| MS.gene91824.t1 | AT1G25270 | 28.972 | 321 | 225 | 2 | 12 | 331 | 4 | 322 | 9.28e-36 | 134 |
| MS.gene91824.t1 | AT1G43650 | 34.167 | 240 | 144 | 5 | 13 | 248 | 9 | 238 | 2.64e-34 | 128 |
| MS.gene91824.t1 | AT3G45870 | 28.254 | 315 | 215 | 3 | 4 | 309 | 5 | 317 | 2.93e-34 | 129 |
| MS.gene91824.t1 | AT4G01450 | 29.846 | 325 | 221 | 2 | 9 | 333 | 8 | 325 | 6.38e-34 | 129 |
| MS.gene91824.t1 | AT4G01430 | 30.769 | 221 | 152 | 1 | 140 | 359 | 1 | 221 | 3.43e-33 | 124 |
| MS.gene91824.t1 | AT4G08290 | 34.286 | 245 | 154 | 2 | 6 | 247 | 8 | 248 | 4.70e-33 | 125 |
| MS.gene91824.t1 | AT2G37450 | 33.047 | 233 | 149 | 3 | 101 | 331 | 5 | 232 | 5.15e-33 | 124 |
| MS.gene91824.t1 | AT4G16620 | 28.022 | 364 | 231 | 7 | 19 | 376 | 20 | 358 | 1.25e-32 | 125 |
| MS.gene91824.t1 | AT4G01450 | 28.571 | 301 | 208 | 2 | 9 | 309 | 8 | 301 | 3.34e-32 | 124 |
| MS.gene91824.t1 | AT4G19185 | 29.231 | 260 | 170 | 3 | 85 | 331 | 16 | 274 | 8.34e-32 | 122 |
| MS.gene91824.t1 | AT3G28130 | 29.097 | 299 | 207 | 5 | 35 | 331 | 37 | 332 | 9.02e-32 | 123 |
| MS.gene91824.t1 | AT3G28070 | 29.889 | 271 | 175 | 7 | 96 | 363 | 9 | 267 | 3.35e-31 | 119 |
| MS.gene91824.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 96 | 331 | 2 | 249 | 3.48e-31 | 120 |
| MS.gene91824.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 96 | 331 | 2 | 249 | 3.48e-31 | 120 |
| MS.gene91824.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 94 | 331 | 9 | 246 | 7.49e-31 | 119 |
| MS.gene91824.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 94 | 331 | 9 | 246 | 7.49e-31 | 119 |
| MS.gene91824.t1 | AT3G28070 | 29.520 | 271 | 176 | 7 | 96 | 363 | 101 | 359 | 3.03e-30 | 119 |
| MS.gene91824.t1 | AT4G01440 | 29.297 | 256 | 168 | 5 | 9 | 259 | 8 | 255 | 1.91e-29 | 115 |
| MS.gene91824.t1 | AT3G28100 | 27.746 | 346 | 239 | 5 | 14 | 358 | 17 | 352 | 1.93e-29 | 117 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 9 | 244 | 4.40e-28 | 111 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 9 | 244 | 4.40e-28 | 111 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 9 | 244 | 4.40e-28 | 111 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 9 | 244 | 4.40e-28 | 111 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 98 | 333 | 3.65e-27 | 110 |
| MS.gene91824.t1 | AT3G28080 | 29.114 | 237 | 166 | 2 | 96 | 331 | 90 | 325 | 3.67e-27 | 110 |
| MS.gene91824.t1 | AT2G37450 | 32.075 | 212 | 137 | 3 | 122 | 331 | 59 | 265 | 4.35e-27 | 109 |
| MS.gene91824.t1 | AT3G45870 | 27.925 | 265 | 180 | 3 | 4 | 259 | 5 | 267 | 4.49e-26 | 106 |
| MS.gene91824.t1 | AT5G45370 | 29.091 | 220 | 140 | 4 | 126 | 331 | 74 | 291 | 7.19e-26 | 106 |
| MS.gene91824.t1 | AT3G30340 | 27.969 | 261 | 182 | 3 | 1 | 259 | 1 | 257 | 1.88e-25 | 104 |
| MS.gene91824.t1 | AT4G24980 | 28.716 | 296 | 136 | 7 | 36 | 328 | 12 | 235 | 2.11e-25 | 104 |
| MS.gene91824.t1 | AT3G45870 | 29.524 | 210 | 138 | 2 | 126 | 326 | 51 | 259 | 4.60e-25 | 103 |
| MS.gene91824.t1 | AT3G28070 | 28.099 | 242 | 159 | 7 | 125 | 363 | 1 | 230 | 2.46e-23 | 97.4 |
| MS.gene91824.t1 | AT3G28130 | 27.273 | 209 | 148 | 4 | 125 | 331 | 1 | 207 | 5.50e-23 | 96.7 |
| MS.gene91824.t1 | AT4G01450 | 27.660 | 235 | 163 | 2 | 11 | 245 | 10 | 237 | 8.93e-23 | 96.7 |
| MS.gene91824.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 101 | 376 | 5 | 261 | 4.28e-22 | 94.7 |
| MS.gene91824.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 101 | 376 | 5 | 261 | 4.28e-22 | 94.7 |
| MS.gene91824.t1 | AT3G28070 | 29.032 | 217 | 148 | 5 | 96 | 309 | 101 | 314 | 5.01e-21 | 92.8 |
| MS.gene91824.t1 | AT4G16620 | 32.701 | 211 | 132 | 3 | 19 | 226 | 20 | 223 | 1.06e-20 | 91.3 |
| MS.gene91824.t1 | AT4G01450 | 28.431 | 204 | 139 | 2 | 11 | 214 | 10 | 206 | 2.29e-20 | 89.7 |
| MS.gene91824.t1 | AT3G28080 | 27.404 | 208 | 149 | 2 | 125 | 331 | 1 | 207 | 3.53e-20 | 89.0 |
| MS.gene91824.t1 | AT3G45870 | 32.168 | 143 | 96 | 1 | 184 | 326 | 42 | 183 | 3.58e-19 | 86.3 |
| MS.gene91824.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 126 | 309 | 51 | 242 | 6.88e-19 | 85.5 |
| MS.gene91824.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 126 | 309 | 51 | 242 | 6.88e-19 | 85.5 |
| MS.gene91824.t1 | AT3G28080 | 26.271 | 236 | 120 | 2 | 96 | 331 | 9 | 190 | 1.41e-18 | 84.0 |
| MS.gene91824.t1 | AT3G28080 | 26.400 | 250 | 125 | 3 | 96 | 340 | 98 | 293 | 7.20e-18 | 83.6 |
| MS.gene91824.t1 | AT3G28130 | 27.111 | 225 | 160 | 4 | 35 | 257 | 37 | 259 | 6.84e-13 | 68.6 |
| MS.gene91824.t1 | AT3G45870 | 27.397 | 146 | 96 | 2 | 123 | 259 | 1 | 145 | 1.70e-12 | 65.5 |
| MS.gene91824.t1 | AT3G28100 | 28.704 | 216 | 153 | 1 | 12 | 227 | 15 | 229 | 7.02e-12 | 65.5 |
| MS.gene91824.t1 | AT3G28130 | 31.034 | 174 | 117 | 3 | 35 | 207 | 37 | 208 | 9.02e-12 | 64.7 |
| MS.gene91824.t1 | AT3G28100 | 27.119 | 236 | 170 | 2 | 14 | 248 | 17 | 251 | 5.65e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTGTCCCCACTATTT+TGG | 0.190725 | 8.3:+81794705 | None:intergenic |
| ATCAATTCTTTGCTTCAATT+TGG | 0.217860 | 8.3:-81794174 | MS.gene91824:CDS |
| TTATTCTTGACCTCACTAAT+TGG | 0.247020 | 8.3:-81795099 | MS.gene91824:CDS |
| ATCAACACCATAGCCATTAT+TGG | 0.257939 | 8.3:+81795390 | None:intergenic |
| AATTGATCTTCCACACATTC+AGG | 0.277827 | 8.3:+81794190 | None:intergenic |
| AGGCTTGTATACTGTACTTT+GGG | 0.280415 | 8.3:-81793737 | MS.gene91824:CDS |
| ACTGTGTTGCCTGGTCAATT+TGG | 0.328526 | 8.3:-81794531 | MS.gene91824:CDS |
| AGAGTTTATATATGCAGGTT+TGG | 0.333917 | 8.3:-81795367 | MS.gene91824:CDS |
| TCTACATTATTTAGTAGCTT+TGG | 0.345668 | 8.3:+81794643 | None:intergenic |
| ATGTAATTTGTTAGCTTGAT+TGG | 0.346431 | 8.3:-81793778 | MS.gene91824:intron |
| GGAATACTACCTTCCAATAA+TGG | 0.346538 | 8.3:-81795403 | MS.gene91824:CDS |
| GTTCTTCCAAATGATGAGTT+TGG | 0.347202 | 8.3:+81793596 | None:intergenic |
| GCTGTAAATGACAAGTAATT+AGG | 0.355735 | 8.3:+81794273 | None:intergenic |
| ATATATGCAGGTTTGGGTAT+TGG | 0.362080 | 8.3:-81795360 | MS.gene91824:CDS |
| GAGTTTATATATGCAGGTTT+GGG | 0.373910 | 8.3:-81795366 | MS.gene91824:CDS |
| TTATTGCCAAACTCATCATT+TGG | 0.381055 | 8.3:-81793602 | MS.gene91824:CDS |
| TTGATAGAGTTTATATATGC+AGG | 0.392453 | 8.3:-81795372 | MS.gene91824:CDS |
| CTTGCCATGATTGACTTTGA+AGG | 0.404722 | 8.3:+81794610 | None:intergenic |
| TTTGTAATAGCAGCCTTTGT+AGG | 0.408588 | 8.3:-81794868 | MS.gene91824:CDS |
| TCATTAATAATCATCAACTT+TGG | 0.411929 | 8.3:+81793670 | None:intergenic |
| GGTGCAATTGGAGTGATCAT+AGG | 0.416497 | 8.3:-81793757 | MS.gene91824:CDS |
| AAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8.3:-81794716 | MS.gene91824:CDS |
| TATTCTTGACCTCACTAATT+GGG | 0.424692 | 8.3:-81795098 | MS.gene91824:intron |
| GTTAGCTTGATTGGTGCAAT+TGG | 0.442208 | 8.3:-81793769 | MS.gene91824:intron |
| TAGGCTTGTATACTGTACTT+TGG | 0.445695 | 8.3:-81793738 | MS.gene91824:CDS |
| TCTTTGAAATGCACCAAGCT+TGG | 0.450004 | 8.3:+81793997 | None:intergenic |
| CTAGTAGTGATAATGAGAAT+TGG | 0.451386 | 8.3:-81794582 | MS.gene91824:CDS |
| AGTATCTATTGCATTGTTGA+AGG | 0.465625 | 8.3:-81794668 | MS.gene91824:CDS |
| TTAGGATGGCTTGCATAAGC+TGG | 0.480462 | 8.3:+81794291 | None:intergenic |
| TTGAGTAATGTGGACTAAGC+AGG | 0.493281 | 8.3:+81793565 | None:intergenic |
| GATAATGAGAATTGGTTGCT+TGG | 0.497928 | 8.3:-81794574 | MS.gene91824:CDS |
| ATTATTAATGAGACAGAGGA+AGG | 0.498746 | 8.3:-81793658 | MS.gene91824:CDS |
| GCTATTACAAATGTAACTGC+TGG | 0.501198 | 8.3:+81794880 | None:intergenic |
| GTGGACTAAGCAGGTAATAG+AGG | 0.502105 | 8.3:+81793574 | None:intergenic |
| TTTCTTGACAGGAGAAACTC+TGG | 0.503537 | 8.3:-81795156 | MS.gene91824:intron |
| TGCTATCTTGTTGCTTCATG+AGG | 0.504097 | 8.3:-81793916 | MS.gene91824:CDS |
| GTCACAATTAATGTGAAAAG+AGG | 0.504645 | 8.3:+81793945 | None:intergenic |
| TTGTAATAGCAGCCTTTGTA+GGG | 0.505236 | 8.3:-81794867 | MS.gene91824:intron |
| CTACCTTCCAATAATGGCTA+TGG | 0.528631 | 8.3:-81795397 | MS.gene91824:CDS |
| TATACCTTCAAAGTCAATCA+TGG | 0.529801 | 8.3:-81794614 | MS.gene91824:CDS |
| AGAACTATAGCCAAAATAGT+GGG | 0.530722 | 8.3:-81794715 | MS.gene91824:CDS |
| CTTCATGAGGAAATATACAT+TGG | 0.532240 | 8.3:-81793903 | MS.gene91824:CDS |
| CGGTACACAACAAATACCCT+AGG | 0.540219 | 8.3:+81795306 | None:intergenic |
| ATTACTTGTCATTTACAGCA+TGG | 0.541204 | 8.3:-81794269 | MS.gene91824:CDS |
| TGTAACTGCTGGAACAAGGT+TGG | 0.541791 | 8.3:+81794891 | None:intergenic |
| TTTGCAGGGTTTGAGCCCTA+GGG | 0.543458 | 8.3:-81795322 | MS.gene91824:CDS |
| GATGATTATTAATGAGACAG+AGG | 0.548661 | 8.3:-81793662 | MS.gene91824:CDS |
| GGGACAATGATATGTATAAG+TGG | 0.560003 | 8.3:-81794694 | MS.gene91824:CDS |
| AGCAACAGGAGCAAGAAGAA+TGG | 0.560164 | 8.3:+81795269 | None:intergenic |
| GTATCTATTGCATTGTTGAA+GGG | 0.561664 | 8.3:-81794667 | MS.gene91824:CDS |
| ATGAGGAAATATACATTGGA+AGG | 0.568135 | 8.3:-81793899 | MS.gene91824:intron |
| CAAAATGAGCCAAATTGACC+AGG | 0.569290 | 8.3:+81794522 | None:intergenic |
| AGTAATTACGTACCCTACAA+AGG | 0.570122 | 8.3:+81794855 | None:intergenic |
| TAACATTCTATCTCCAAGCT+TGG | 0.571991 | 8.3:-81794010 | MS.gene91824:CDS |
| CAAATGTAACTGCTGGAACA+AGG | 0.576764 | 8.3:+81794887 | None:intergenic |
| TGCTGGAACAAGGTTGGACA+TGG | 0.579813 | 8.3:+81794897 | None:intergenic |
| TCACAATTAATGTGAAAAGA+GGG | 0.589292 | 8.3:+81793946 | None:intergenic |
| GGCTTGTATACTGTACTTTG+GGG | 0.593434 | 8.3:-81793736 | MS.gene91824:CDS |
| GCTTGGTGCATTTCAAAGAG+AGG | 0.611097 | 8.3:-81793993 | MS.gene91824:CDS |
| TAAATGACAAGTAATTAGGA+TGG | 0.617968 | 8.3:+81794277 | None:intergenic |
| ACACCATAGCCATTATTGGA+AGG | 0.627721 | 8.3:+81795394 | None:intergenic |
| TTATTAATGAGACAGAGGAA+GGG | 0.651566 | 8.3:-81793657 | MS.gene91824:CDS |
| GGAAACTAACCCAATTAGTG+AGG | 0.656012 | 8.3:+81795089 | None:intergenic |
| GAATGGTTGCAATAGCATGA+CGG | 0.671471 | 8.3:+81795286 | None:intergenic |
| TTAAACATAGCAGAGAAGAG+AGG | 0.674281 | 8.3:+81793969 | None:intergenic |
| TTGAATCAGACCTGAATGTG+TGG | 0.674327 | 8.3:-81794200 | MS.gene91824:CDS |
| GAACTATAGCCAAAATAGTG+GGG | 0.681705 | 8.3:-81794714 | MS.gene91824:CDS |
| GGTACACAACAAATACCCTA+GGG | 0.684227 | 8.3:+81795307 | None:intergenic |
| AAAGATGAGATGTTTAGACA+TGG | 0.709596 | 8.3:-81795424 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAAATTTATTTTTTGA+GGG | - | chr8.3:81794047-81794066 | MS.gene91824:intron | 10.0% |
| !! | AAATGTAATTACTACTAATT+AGG | + | chr8.3:81794945-81794964 | None:intergenic | 15.0% |
| !! | AGAAAAACTCTTTAAATTTA+AGG | + | chr8.3:81793877-81793896 | None:intergenic | 15.0% |
| !! | ATATTATAATTACTAGAGAA+TGG | + | chr8.3:81793934-81793953 | None:intergenic | 15.0% |
| !!! | AGTAGTAATTACATTTTATA+GGG | - | chr8.3:81794949-81794968 | MS.gene91824:CDS | 15.0% |
| !!! | GAATCAAAATTTATTTTTTG+AGG | - | chr8.3:81794046-81794065 | MS.gene91824:intron | 15.0% |
| !!! | TAGTAGTAATTACATTTTAT+AGG | - | chr8.3:81794948-81794967 | MS.gene91824:CDS | 15.0% |
| !! | AATACTATTATACTACAGAA+TGG | - | chr8.3:81794238-81794257 | MS.gene91824:CDS | 20.0% |
| !! | AATGAAGAAAATAATAGAAG+TGG | + | chr8.3:81793785-81793804 | None:intergenic | 20.0% |
| !! | ATAAATTAATACATCATCAG+TGG | - | chr8.3:81794919-81794938 | MS.gene91824:CDS | 20.0% |
| !! | CTTATCTCAAATTGAATTAT+AGG | - | chr8.3:81795165-81795184 | MS.gene91824:intron | 20.0% |
| !! | TCATTAATAATCATCAACTT+TGG | + | chr8.3:81795332-81795351 | None:intergenic | 20.0% |
| !!! | CGAATGTGTTTTTTAATTAT+TGG | - | chr8.3:81794204-81794223 | MS.gene91824:CDS | 20.0% |
| ! | ATCAATTCTTTGCTTCAATT+TGG | - | chr8.3:81794825-81794844 | MS.gene91824:intron | 25.0% |
| ! | CATATTTACACTACTCATTA+CGG | - | chr8.3:81793959-81793978 | MS.gene91824:CDS | 25.0% |
| ! | TAAATGACAAGTAATTAGGA+TGG | + | chr8.3:81794725-81794744 | None:intergenic | 25.0% |
| ! | TATCATATTATACTTTCCTC+AGG | - | chr8.3:81794683-81794702 | MS.gene91824:CDS | 25.0% |
| ! | TCACAATTAATGTGAAAAGA+GGG | + | chr8.3:81795056-81795075 | None:intergenic | 25.0% |
| ! | TCTACATTATTTAGTAGCTT+TGG | + | chr8.3:81794359-81794378 | None:intergenic | 25.0% |
| ! | TTGATAGAGTTTATATATGC+AGG | - | chr8.3:81793627-81793646 | MS.gene91824:CDS | 25.0% |
| !! | TACATTTTATAGGGAATCAT+GGG | - | chr8.3:81794958-81794977 | MS.gene91824:CDS | 25.0% |
| !! | TTACATTTTATAGGGAATCA+TGG | - | chr8.3:81794957-81794976 | MS.gene91824:CDS | 25.0% |
| !!! | ACAAGAATTGTATTTTTGCA+GGG | - | chr8.3:81793663-81793682 | MS.gene91824:CDS | 25.0% |
| !!! | ATGTAATTTGTTAGCTTGAT+TGG | - | chr8.3:81795221-81795240 | MS.gene91824:intron | 25.0% |
| !!! | TATTTCTTTTGTTTCTTGAC+AGG | - | chr8.3:81793832-81793851 | MS.gene91824:intron | 25.0% |
| AAGAACTATAGCCAAAATAG+TGG | - | chr8.3:81794283-81794302 | MS.gene91824:CDS | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | chr8.3:81794284-81794303 | MS.gene91824:CDS | 30.0% | |
| AGAGTTTATATATGCAGGTT+TGG | - | chr8.3:81793632-81793651 | MS.gene91824:CDS | 30.0% | |
| AGTATCTATTGCATTGTTGA+AGG | - | chr8.3:81794331-81794350 | MS.gene91824:intron | 30.0% | |
| ATGAGGAAATATACATTGGA+AGG | - | chr8.3:81795100-81795119 | MS.gene91824:CDS | 30.0% | |
| ATTATTAATGAGACAGAGGA+AGG | - | chr8.3:81795341-81795360 | MS.gene91824:CDS | 30.0% | |
| CTTCATGAGGAAATATACAT+TGG | - | chr8.3:81795096-81795115 | MS.gene91824:intron | 30.0% | |
| GAGTTTATATATGCAGGTTT+GGG | - | chr8.3:81793633-81793652 | MS.gene91824:CDS | 30.0% | |
| GATGATTATTAATGAGACAG+AGG | - | chr8.3:81795337-81795356 | MS.gene91824:CDS | 30.0% | |
| GCTGTAAATGACAAGTAATT+AGG | + | chr8.3:81794729-81794748 | None:intergenic | 30.0% | |
| GTATCTATTGCATTGTTGAA+GGG | - | chr8.3:81794332-81794351 | MS.gene91824:intron | 30.0% | |
| GTCACAATTAATGTGAAAAG+AGG | + | chr8.3:81795057-81795076 | None:intergenic | 30.0% | |
| TATACCTTCAAAGTCAATCA+TGG | - | chr8.3:81794385-81794404 | MS.gene91824:intron | 30.0% | |
| TATTCTTGACCTCACTAATT+GGG | - | chr8.3:81793901-81793920 | MS.gene91824:CDS | 30.0% | |
| TTATTAATGAGACAGAGGAA+GGG | - | chr8.3:81795342-81795361 | MS.gene91824:CDS | 30.0% | |
| TTATTCTTGACCTCACTAAT+TGG | - | chr8.3:81793900-81793919 | MS.gene91824:CDS | 30.0% | |
| TTATTGCCAAACTCATCATT+TGG | - | chr8.3:81795397-81795416 | MS.gene91824:CDS | 30.0% | |
| ! | ATTACTTGTCATTTACAGCA+TGG | - | chr8.3:81794730-81794749 | MS.gene91824:CDS | 30.0% |
| ! | CTAGTAGTGATAATGAGAAT+TGG | - | chr8.3:81794417-81794436 | MS.gene91824:intron | 30.0% |
| ! | TGATTTGTGTTATCATGTCA+TGG | - | chr8.3:81793997-81794016 | MS.gene91824:CDS | 30.0% |
| ! | TGCATTTTATATGCAGTATG+TGG | - | chr8.3:81794849-81794868 | MS.gene91824:intron | 30.0% |
| !! | CACAAGAATTGTATTTTTGC+AGG | - | chr8.3:81793662-81793681 | MS.gene91824:CDS | 30.0% |
| AATTGATCTTCCACACATTC+AGG | + | chr8.3:81794812-81794831 | None:intergenic | 35.0% | |
| AGGCTTGTATACTGTACTTT+GGG | - | chr8.3:81795262-81795281 | MS.gene91824:CDS | 35.0% | |
| AGTAATTACGTACCCTACAA+AGG | + | chr8.3:81794147-81794166 | None:intergenic | 35.0% | |
| ATATATGCAGGTTTGGGTAT+TGG | - | chr8.3:81793639-81793658 | MS.gene91824:CDS | 35.0% | |
| ATCAACACCATAGCCATTAT+TGG | + | chr8.3:81793612-81793631 | None:intergenic | 35.0% | |
| GAACTATAGCCAAAATAGTG+GGG | - | chr8.3:81794285-81794304 | MS.gene91824:CDS | 35.0% | |
| GATAATGAGAATTGGTTGCT+TGG | - | chr8.3:81794425-81794444 | MS.gene91824:intron | 35.0% | |
| GCTATTACAAATGTAACTGC+TGG | + | chr8.3:81794122-81794141 | None:intergenic | 35.0% | |
| GGAATACTACCTTCCAATAA+TGG | - | chr8.3:81793596-81793615 | MS.gene91824:CDS | 35.0% | |
| GGGACAATGATATGTATAAG+TGG | - | chr8.3:81794305-81794324 | MS.gene91824:intron | 35.0% | |
| GTTCTTCCAAATGATGAGTT+TGG | + | chr8.3:81795406-81795425 | None:intergenic | 35.0% | |
| TAACATTCTATCTCCAAGCT+TGG | - | chr8.3:81794989-81795008 | MS.gene91824:intron | 35.0% | |
| TACCCTGAAAAATAAGCAAC+AGG | + | chr8.3:81793747-81793766 | None:intergenic | 35.0% | |
| TAGGCTTGTATACTGTACTT+TGG | - | chr8.3:81795261-81795280 | MS.gene91824:CDS | 35.0% | |
| TTAAACATAGCAGAGAAGAG+AGG | + | chr8.3:81795033-81795052 | None:intergenic | 35.0% | |
| TTGTAATAGCAGCCTTTGTA+GGG | - | chr8.3:81794132-81794151 | MS.gene91824:intron | 35.0% | |
| TTTGTAATAGCAGCCTTTGT+AGG | - | chr8.3:81794131-81794150 | MS.gene91824:intron | 35.0% | |
| ! | CTTGGATGTCTTTGTCTTTT+AGG | - | chr8.3:81794443-81794462 | MS.gene91824:intron | 35.0% |
| ! | TATCATTGTCCCCACTATTT+TGG | + | chr8.3:81794297-81794316 | None:intergenic | 35.0% |
| !! | CTCCTGTTGCTTATTTTTCA+GGG | - | chr8.3:81793742-81793761 | MS.gene91824:CDS | 35.0% |
| ACACCATAGCCATTATTGGA+AGG | + | chr8.3:81793608-81793627 | None:intergenic | 40.0% | |
| CAAAATGAGCCAAATTGACC+AGG | + | chr8.3:81794480-81794499 | None:intergenic | 40.0% | |
| CAAATGTAACTGCTGGAACA+AGG | + | chr8.3:81794115-81794134 | None:intergenic | 40.0% | |
| CTACCTTCCAATAATGGCTA+TGG | - | chr8.3:81793602-81793621 | MS.gene91824:CDS | 40.0% | |
| GAATGGTTGCAATAGCATGA+CGG | + | chr8.3:81793716-81793735 | None:intergenic | 40.0% | |
| GGAAACTAACCCAATTAGTG+AGG | + | chr8.3:81793913-81793932 | None:intergenic | 40.0% | |
| GGCTTGTATACTGTACTTTG+GGG | - | chr8.3:81795263-81795282 | MS.gene91824:CDS | 40.0% | |
| GGTACACAACAAATACCCTA+GGG | + | chr8.3:81793695-81793714 | None:intergenic | 40.0% | |
| TTGAATCAGACCTGAATGTG+TGG | - | chr8.3:81794799-81794818 | MS.gene91824:intron | 40.0% | |
| TTTCTTGACAGGAGAAACTC+TGG | - | chr8.3:81793843-81793862 | MS.gene91824:intron | 40.0% | |
| ! | CTTGCCATGATTGACTTTGA+AGG | + | chr8.3:81794392-81794411 | None:intergenic | 40.0% |
| ! | GTTAGCTTGATTGGTGCAAT+TGG | - | chr8.3:81795230-81795249 | MS.gene91824:intron | 40.0% |
| ! | TGCTATCTTGTTGCTTCATG+AGG | - | chr8.3:81795083-81795102 | MS.gene91824:intron | 40.0% |
| !! | GCTCCTGTTGCTTATTTTTC+AGG | - | chr8.3:81793741-81793760 | MS.gene91824:CDS | 40.0% |
| !! | GTCAATTTGGCTCATTTTGC+AGG | - | chr8.3:81794481-81794500 | MS.gene91824:intron | 40.0% |
| !! | TCTTTGAAATGCACCAAGCT+TGG | + | chr8.3:81795005-81795024 | None:intergenic | 40.0% |
| !! | TTTTAGGAAACTGTGTTGCC+TGG | - | chr8.3:81794459-81794478 | MS.gene91824:intron | 40.0% |
| ACTGTGTTGCCTGGTCAATT+TGG | - | chr8.3:81794468-81794487 | MS.gene91824:intron | 45.0% | |
| AGCAACAGGAGCAAGAAGAA+TGG | + | chr8.3:81793733-81793752 | None:intergenic | 45.0% | |
| CGGTACACAACAAATACCCT+AGG | + | chr8.3:81793696-81793715 | None:intergenic | 45.0% | |
| GGTGCAATTGGAGTGATCAT+AGG | - | chr8.3:81795242-81795261 | MS.gene91824:intron | 45.0% | |
| TGTAACTGCTGGAACAAGGT+TGG | + | chr8.3:81794111-81794130 | None:intergenic | 45.0% | |
| ! | TTAGGATGGCTTGCATAAGC+TGG | + | chr8.3:81794711-81794730 | None:intergenic | 45.0% |
| !! | GCTTGGTGCATTTCAAAGAG+AGG | - | chr8.3:81795006-81795025 | MS.gene91824:intron | 45.0% |
| CTTGCATAAGCTGGAACCTG+AGG | + | chr8.3:81794702-81794721 | None:intergenic | 50.0% | |
| TGCTGGAACAAGGTTGGACA+TGG | + | chr8.3:81794105-81794124 | None:intergenic | 50.0% | |
| TTTGCAGGGTTTGAGCCCTA+GGG | - | chr8.3:81793677-81793696 | MS.gene91824:CDS | 50.0% | |
| ! | TTTTGCAGGGTTTGAGCCCT+AGG | - | chr8.3:81793676-81793695 | MS.gene91824:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 81793579 | 81795442 | 81793579 | ID=MS.gene91824 |
| chr8.3 | mRNA | 81793579 | 81795442 | 81793579 | ID=MS.gene91824.t1;Parent=MS.gene91824 |
| chr8.3 | exon | 81795258 | 81795442 | 81795258 | ID=MS.gene91824.t1.exon1;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81795258 | 81795442 | 81795258 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81795099 | 81795167 | 81795099 | ID=MS.gene91824.t1.exon2;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81795099 | 81795167 | 81795099 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81794868 | 81794984 | 81794868 | ID=MS.gene91824.t1.exon3;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81794868 | 81794984 | 81794868 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81794519 | 81794765 | 81794519 | ID=MS.gene91824.t1.exon4;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81794519 | 81794765 | 81794519 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81794158 | 81794316 | 81794158 | ID=MS.gene91824.t1.exon5;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81794158 | 81794316 | 81794158 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81793900 | 81794051 | 81793900 | ID=MS.gene91824.t1.exon6;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81793900 | 81794051 | 81793900 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| chr8.3 | exon | 81793579 | 81793786 | 81793579 | ID=MS.gene91824.t1.exon7;Parent=MS.gene91824.t1 |
| chr8.3 | CDS | 81793579 | 81793786 | 81793579 | ID=cds.MS.gene91824.t1;Parent=MS.gene91824.t1 |
| Gene Sequence |
| Protein sequence |
