Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91968.t1 | XP_003618017.1 | 94.3 | 263 | 13 | 2 | 1 | 262 | 1 | 262 | 1.00E-93 | 353.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91968.t1 | Q9SJ81 | 69.7 | 152 | 46 | 0 | 50 | 201 | 48 | 199 | 1.5e-56 | 221.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91968.t1 | G7K503 | 94.3 | 263 | 13 | 2 | 1 | 262 | 1 | 262 | 7.4e-94 | 353.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene91968 | 0.83078 | 2.42E-55 | -1.69E-46 |
MS.gene050875 | MS.gene91968 | 0.80326 | 3.79E-49 | -1.69E-46 |
MS.gene051552 | MS.gene91968 | 0.806571 | 7.71E-50 | -1.69E-46 |
MS.gene052169 | MS.gene91968 | 0.810523 | 1.10E-50 | -1.69E-46 |
MS.gene054662 | MS.gene91968 | 0.836592 | 8.55E-57 | -1.69E-46 |
MS.gene054941 | MS.gene91968 | 0.822187 | 2.71E-53 | -1.69E-46 |
MS.gene055731 | MS.gene91968 | 0.8023 | 5.99E-49 | -1.69E-46 |
MS.gene05652 | MS.gene91968 | 0.854436 | 1.23E-61 | -1.69E-46 |
MS.gene057669 | MS.gene91968 | 0.819245 | 1.28E-52 | -1.69E-46 |
MS.gene058418 | MS.gene91968 | 0.807821 | 4.19E-50 | -1.69E-46 |
MS.gene05926 | MS.gene91968 | 0.819176 | 1.33E-52 | -1.69E-46 |
MS.gene05960 | MS.gene91968 | 0.840249 | 9.74E-58 | -1.69E-46 |
MS.gene059616 | MS.gene91968 | 0.802427 | 5.64E-49 | -1.69E-46 |
MS.gene059844 | MS.gene91968 | 0.800324 | 1.52E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91968.t1 | MTR_5g098060 | 90.114 | 263 | 24 | 2 | 1 | 262 | 1 | 262 | 1.24e-139 | 393 |
MS.gene91968.t1 | MTR_7g101080 | 40.237 | 169 | 90 | 4 | 33 | 195 | 26 | 189 | 2.77e-32 | 119 |
MS.gene91968.t1 | MTR_2g090765 | 33.043 | 230 | 151 | 3 | 31 | 259 | 22 | 249 | 4.56e-27 | 105 |
MS.gene91968.t1 | MTR_4g059720 | 35.789 | 190 | 111 | 4 | 8 | 194 | 8 | 189 | 1.48e-24 | 99.0 |
MS.gene91968.t1 | MTR_4g059840 | 32.787 | 244 | 146 | 8 | 28 | 261 | 55 | 290 | 2.49e-23 | 96.3 |
MS.gene91968.t1 | MTR_4g059790 | 32.174 | 230 | 138 | 8 | 28 | 247 | 55 | 276 | 1.89e-21 | 91.3 |
MS.gene91968.t1 | MTR_2g093990 | 36.667 | 150 | 90 | 2 | 48 | 194 | 41 | 188 | 3.53e-21 | 89.7 |
MS.gene91968.t1 | MTR_7g075453 | 33.714 | 175 | 110 | 4 | 47 | 219 | 183 | 353 | 3.81e-20 | 89.4 |
MS.gene91968.t1 | MTR_4g053380 | 29.461 | 241 | 154 | 7 | 28 | 260 | 59 | 291 | 7.19e-20 | 87.0 |
MS.gene91968.t1 | MTR_8g087470 | 32.086 | 187 | 106 | 5 | 22 | 190 | 56 | 239 | 1.36e-19 | 86.7 |
MS.gene91968.t1 | MTR_8g087460 | 31.551 | 187 | 107 | 5 | 22 | 190 | 56 | 239 | 5.68e-19 | 85.1 |
MS.gene91968.t1 | MTR_2g017960 | 29.381 | 194 | 128 | 4 | 48 | 237 | 68 | 256 | 2.33e-18 | 82.8 |
MS.gene91968.t1 | MTR_2g017970 | 30.244 | 205 | 129 | 5 | 48 | 243 | 68 | 267 | 2.96e-18 | 82.4 |
MS.gene91968.t1 | MTR_8g087450 | 31.098 | 164 | 104 | 4 | 31 | 190 | 63 | 221 | 1.49e-17 | 80.5 |
MS.gene91968.t1 | MTR_2g437700 | 34.395 | 157 | 96 | 3 | 46 | 197 | 193 | 347 | 1.51e-17 | 82.0 |
MS.gene91968.t1 | MTR_2g017950 | 28.378 | 222 | 125 | 7 | 1 | 190 | 2 | 221 | 1.68e-16 | 77.8 |
MS.gene91968.t1 | MTR_2g093980 | 32.026 | 153 | 98 | 3 | 48 | 196 | 69 | 219 | 1.10e-15 | 75.5 |
MS.gene91968.t1 | MTR_4g059780 | 32.984 | 191 | 106 | 8 | 26 | 196 | 52 | 240 | 1.22e-15 | 75.5 |
MS.gene91968.t1 | MTR_2g093970 | 28.365 | 208 | 122 | 5 | 8 | 190 | 8 | 213 | 7.52e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91968.t1 | AT2G04780 | 65.079 | 189 | 66 | 0 | 47 | 235 | 45 | 233 | 1.71e-77 | 235 |
MS.gene91968.t1 | AT2G04780 | 65.079 | 189 | 66 | 0 | 47 | 235 | 45 | 233 | 1.71e-77 | 235 |
MS.gene91968.t1 | AT5G44130 | 34.359 | 195 | 120 | 4 | 47 | 237 | 35 | 225 | 1.25e-31 | 117 |
MS.gene91968.t1 | AT1G03870 | 33.333 | 219 | 130 | 6 | 47 | 262 | 38 | 243 | 5.26e-31 | 115 |
MS.gene91968.t1 | AT2G20520 | 36.444 | 225 | 125 | 6 | 16 | 224 | 1 | 223 | 1.00e-30 | 115 |
MS.gene91968.t1 | AT5G03170 | 36.842 | 171 | 104 | 3 | 37 | 204 | 26 | 195 | 1.71e-28 | 109 |
MS.gene91968.t1 | AT5G60490 | 34.054 | 185 | 109 | 2 | 48 | 230 | 39 | 212 | 8.87e-23 | 94.0 |
MS.gene91968.t1 | AT3G46550 | 34.694 | 196 | 113 | 7 | 22 | 211 | 187 | 373 | 3.22e-21 | 92.4 |
MS.gene91968.t1 | AT3G60900 | 34.659 | 176 | 105 | 5 | 39 | 208 | 180 | 351 | 1.98e-18 | 84.3 |
MS.gene91968.t1 | AT2G45470 | 32.889 | 225 | 133 | 5 | 29 | 240 | 170 | 389 | 1.27e-16 | 79.3 |
Find 63 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATCGTCAGCTATGGAATT+TGG | 0.201670 | 5.2:+82523843 | MS.gene91968:CDS |
CAGTGTTGTTTGCTTGGTTT+TGG | 0.217264 | 5.2:-82523349 | None:intergenic |
AACCTTATGTTGGCAACTTT+TGG | 0.238678 | 5.2:+82523869 | MS.gene91968:CDS |
CCTTCAATCCACAAAAGTTT+TGG | 0.254005 | 5.2:+82523319 | MS.gene91968:CDS |
TCAGCTGCAGGCGCAATTTC+AGG | 0.267157 | 5.2:-82523746 | None:intergenic |
CTTCTTCAGTGTTGTTTGCT+TGG | 0.268289 | 5.2:-82523355 | None:intergenic |
GATGCAAAGGAACTGTCTTT+TGG | 0.284786 | 5.2:-82523395 | None:intergenic |
CTCCCAGCACTTTGGTCAGC+TGG | 0.303486 | 5.2:-82523773 | None:intergenic |
GATCGTCAGCTATGGAATTT+GGG | 0.308948 | 5.2:+82523844 | MS.gene91968:CDS |
GGAACTGTCAAAATTAATTC+AGG | 0.309797 | 5.2:+82523590 | MS.gene91968:CDS |
CACTGATATTCCTCCTGTTC+CGG | 0.318299 | 5.2:+82523709 | MS.gene91968:CDS |
TTGAATTTCACCGATAATTC+CGG | 0.349314 | 5.2:+82523569 | MS.gene91968:CDS |
AATCTCATCAGCTTTGAGTT+TGG | 0.359351 | 5.2:-82523438 | None:intergenic |
GCCTCAACTCCAACATTTGC+CGG | 0.365489 | 5.2:+82523533 | MS.gene91968:CDS |
TTTGACAGTTCCGGAATTAT+CGG | 0.367204 | 5.2:-82523579 | None:intergenic |
AGAGGGTGGACTTACAGTTT+TGG | 0.375027 | 5.2:-82523189 | None:intergenic |
GTGGGTGCAGGAGCCGGAAC+AGG | 0.376931 | 5.2:-82523722 | None:intergenic |
ACTGAATTACTCACTGTTGC+TGG | 0.384658 | 5.2:+82523272 | MS.gene91968:CDS |
GGAGCCGGAGTTGGACTCTC+GGG | 0.395594 | 5.2:-82523215 | None:intergenic |
TGCAATTTATCAAGTTGATA+AGG | 0.410347 | 5.2:+82523661 | MS.gene91968:CDS |
TCAACTTGATAAATTGCAAC+AGG | 0.410462 | 5.2:-82523656 | None:intergenic |
TTGTAAGAAGACGAACTATC+TGG | 0.433149 | 5.2:-82523821 | None:intergenic |
ATGTTGGAGTTGAGGCAGTT+TGG | 0.434404 | 5.2:-82523526 | None:intergenic |
GCTGGTGCCGGAGCCGGAGT+TGG | 0.438953 | 5.2:-82523224 | None:intergenic |
TATTGAAGAAAAGTGTGAAA+TGG | 0.451994 | 5.2:-82523296 | None:intergenic |
AACCAAAAGTTGCCAACATA+AGG | 0.457676 | 5.2:-82523871 | None:intergenic |
GTAGGTGCTGGTGCCGGAGC+CGG | 0.464353 | 5.2:-82523230 | None:intergenic |
GAGTTGAGGCAGTTTGGCTA+AGG | 0.468259 | 5.2:-82523520 | None:intergenic |
TCAGGTGTGGGTGCAGGAGC+CGG | 0.468971 | 5.2:-82523728 | None:intergenic |
TCTCCAGCTGACCAAAGTGC+TGG | 0.473142 | 5.2:+82523770 | MS.gene91968:CDS |
CGGAGCCGGAGTTGGACTCT+CGG | 0.473204 | 5.2:-82523216 | None:intergenic |
GCAATTTCAGGTGTGGGTGC+AGG | 0.479601 | 5.2:-82523734 | None:intergenic |
CGAGAGTCCAACTCCGGCTC+CGG | 0.489134 | 5.2:+82523217 | MS.gene91968:CDS |
TGCAGGCGCAATTTCAGGTG+TGG | 0.492103 | 5.2:-82523741 | None:intergenic |
CAAGCAAACAACACTGAAGA+AGG | 0.495908 | 5.2:+82523356 | MS.gene91968:CDS |
AATGTGGCAAAGCATGGAAA+AGG | 0.503046 | 5.2:-82523472 | None:intergenic |
ACGATTTGCTCCCAGCACTT+TGG | 0.511706 | 5.2:-82523781 | None:intergenic |
GCAGGCGCAATTTCAGGTGT+GGG | 0.518557 | 5.2:-82523740 | None:intergenic |
ACGAAATCTAATGTAGGTGC+TGG | 0.520967 | 5.2:-82523242 | None:intergenic |
TCAGCTGGAGAATCAGCTGC+AGG | 0.533442 | 5.2:-82523758 | None:intergenic |
TCTTACAAGATCGTCAGCTA+TGG | 0.536563 | 5.2:+82523836 | MS.gene91968:CDS |
GAGCCGGAGTTGGACTCTCG+GGG | 0.539393 | 5.2:-82523214 | None:intergenic |
CTCCAGCTGACCAAAGTGCT+GGG | 0.544197 | 5.2:+82523771 | MS.gene91968:CDS |
AATAGAAATGTGGCAAAGCA+TGG | 0.549806 | 5.2:-82523478 | None:intergenic |
TTCAGGATGGTCAATCACTA+AGG | 0.555642 | 5.2:+82523607 | MS.gene91968:CDS |
TAATCACCACCGGCAAATGT+TGG | 0.556429 | 5.2:-82523542 | None:intergenic |
GGTGCAGGAGCCGGAACAGG+AGG | 0.561308 | 5.2:-82523719 | None:intergenic |
GCTTTGAGTTTGGATAAAGA+AGG | 0.566467 | 5.2:-82523428 | None:intergenic |
AATTTGGGGCAACCTTATGT+TGG | 0.567248 | 5.2:+82523859 | MS.gene91968:CDS |
GAACTATCTGGTGAAGATGA+AGG | 0.574002 | 5.2:-82523809 | None:intergenic |
AGGTTTCTTCAATGATGCAA+AGG | 0.576849 | 5.2:-82523408 | None:intergenic |
TCTAATGTAGGTGCTGGTGC+CGG | 0.581815 | 5.2:-82523236 | None:intergenic |
ACCGGCAAATGTTGGAGTTG+AGG | 0.585382 | 5.2:-82523534 | None:intergenic |
AGGTTTACGAAATCTAATGT+AGG | 0.597963 | 5.2:-82523248 | None:intergenic |
CTGTCAAAATTAATTCAGGA+TGG | 0.599822 | 5.2:+82523594 | MS.gene91968:CDS |
ATTCAAAGTGTAATCACCAC+CGG | 0.611570 | 5.2:-82523552 | None:intergenic |
ATAAATTGCAACAGGATCAG+TGG | 0.614239 | 5.2:-82523648 | None:intergenic |
GCCGGAGTTGGACTCTCGGG+GGG | 0.624804 | 5.2:-82523212 | None:intergenic |
AGCCGGAGTTGGACTCTCGG+GGG | 0.649411 | 5.2:-82523213 | None:intergenic |
ATCGTCAGCTATGGAATTTG+GGG | 0.659891 | 5.2:+82523845 | MS.gene91968:CDS |
TCAGCTAGTGAATAGAAATG+TGG | 0.662953 | 5.2:-82523488 | None:intergenic |
TCAACTCCAACATTTGCCGG+TGG | 0.688338 | 5.2:+82523536 | MS.gene91968:CDS |
CAACAGTGAGTAATTCAGTG+AGG | 0.724352 | 5.2:-82523268 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTGAAGAAAAGTGTGAAA+TGG | - | chr5.2:82523299-82523318 | None:intergenic | 25.0% |
!!! | TGAATTAATTTTGACAGTTC+CGG | - | chr5.2:82523591-82523610 | None:intergenic | 25.0% |
!!! | TGCAATTTATCAAGTTGATA+AGG | + | chr5.2:82523661-82523680 | MS.gene91968:CDS | 25.0% |
AGGTTTACGAAATCTAATGT+AGG | - | chr5.2:82523251-82523270 | None:intergenic | 30.0% | |
CTGTCAAAATTAATTCAGGA+TGG | + | chr5.2:82523594-82523613 | MS.gene91968:CDS | 30.0% | |
GGAACTGTCAAAATTAATTC+AGG | + | chr5.2:82523590-82523609 | MS.gene91968:CDS | 30.0% | |
TCAACTTGATAAATTGCAAC+AGG | - | chr5.2:82523659-82523678 | None:intergenic | 30.0% | |
TTGAATTTCACCGATAATTC+CGG | + | chr5.2:82523569-82523588 | MS.gene91968:CDS | 30.0% | |
AACCAAAAGTTGCCAACATA+AGG | - | chr5.2:82523874-82523893 | None:intergenic | 35.0% | |
AATAGAAATGTGGCAAAGCA+TGG | - | chr5.2:82523481-82523500 | None:intergenic | 35.0% | |
AGGTTTCTTCAATGATGCAA+AGG | - | chr5.2:82523411-82523430 | None:intergenic | 35.0% | |
ATAAATTGCAACAGGATCAG+TGG | - | chr5.2:82523651-82523670 | None:intergenic | 35.0% | |
ATTCAAAGTGTAATCACCAC+CGG | - | chr5.2:82523555-82523574 | None:intergenic | 35.0% | |
TCAGCTAGTGAATAGAAATG+TGG | - | chr5.2:82523491-82523510 | None:intergenic | 35.0% | |
TTGTAAGAAGACGAACTATC+TGG | - | chr5.2:82523824-82523843 | None:intergenic | 35.0% | |
TTTGACAGTTCCGGAATTAT+CGG | - | chr5.2:82523582-82523601 | None:intergenic | 35.0% | |
! | AACCTTATGTTGGCAACTTT+TGG | + | chr5.2:82523869-82523888 | MS.gene91968:CDS | 35.0% |
! | CCTTCAATCCACAAAAGTTT+TGG | + | chr5.2:82523319-82523338 | MS.gene91968:CDS | 35.0% |
! | GAATGTGTCCAAAACTTTTG+TGG | - | chr5.2:82523330-82523349 | None:intergenic | 35.0% |
! | GCTTTGAGTTTGGATAAAGA+AGG | - | chr5.2:82523431-82523450 | None:intergenic | 35.0% |
!! | AATCTCATCAGCTTTGAGTT+TGG | - | chr5.2:82523441-82523460 | None:intergenic | 35.0% |
!! | CCAAAACTTTTGTGGATTGA+AGG | - | chr5.2:82523322-82523341 | None:intergenic | 35.0% |
AATGTGGCAAAGCATGGAAA+AGG | - | chr5.2:82523475-82523494 | None:intergenic | 40.0% | |
ACGAAATCTAATGTAGGTGC+TGG | - | chr5.2:82523245-82523264 | None:intergenic | 40.0% | |
ACTGAATTACTCACTGTTGC+TGG | + | chr5.2:82523272-82523291 | MS.gene91968:CDS | 40.0% | |
AGATCGTCAGCTATGGAATT+TGG | + | chr5.2:82523843-82523862 | MS.gene91968:CDS | 40.0% | |
ATCGTCAGCTATGGAATTTG+GGG | + | chr5.2:82523845-82523864 | MS.gene91968:CDS | 40.0% | |
CAACAGTGAGTAATTCAGTG+AGG | - | chr5.2:82523271-82523290 | None:intergenic | 40.0% | |
CAAGCAAACAACACTGAAGA+AGG | + | chr5.2:82523356-82523375 | MS.gene91968:CDS | 40.0% | |
GAACTATCTGGTGAAGATGA+AGG | - | chr5.2:82523812-82523831 | None:intergenic | 40.0% | |
GATCGTCAGCTATGGAATTT+GGG | + | chr5.2:82523844-82523863 | MS.gene91968:CDS | 40.0% | |
TCTTACAAGATCGTCAGCTA+TGG | + | chr5.2:82523836-82523855 | MS.gene91968:CDS | 40.0% | |
TTCAGGATGGTCAATCACTA+AGG | + | chr5.2:82523607-82523626 | MS.gene91968:CDS | 40.0% | |
! | AATTTGGGGCAACCTTATGT+TGG | + | chr5.2:82523859-82523878 | MS.gene91968:CDS | 40.0% |
! | GATGCAAAGGAACTGTCTTT+TGG | - | chr5.2:82523398-82523417 | None:intergenic | 40.0% |
! | TGATAAGGTTTTGCTTCCTG+AGG | + | chr5.2:82523676-82523695 | MS.gene91968:CDS | 40.0% |
!! | CTTCTTCAGTGTTGTTTGCT+TGG | - | chr5.2:82523358-82523377 | None:intergenic | 40.0% |
!! | TTGCTTCCTGAGGCTATTTT+TGG | + | chr5.2:82523686-82523705 | MS.gene91968:CDS | 40.0% |
!!! | CAGTGTTGTTTGCTTGGTTT+TGG | - | chr5.2:82523352-82523371 | None:intergenic | 40.0% |
!!! | GTTGGCAACTTTTGGTTTGT+TGG | + | chr5.2:82523877-82523896 | MS.gene91968:CDS | 40.0% |
ATGTTGGAGTTGAGGCAGTT+TGG | - | chr5.2:82523529-82523548 | None:intergenic | 45.0% | |
CACTGATATTCCTCCTGTTC+CGG | + | chr5.2:82523709-82523728 | MS.gene91968:CDS | 45.0% | |
TAATCACCACCGGCAAATGT+TGG | - | chr5.2:82523545-82523564 | None:intergenic | 45.0% | |
TCAGTGCCAAAAATAGCCTC+AGG | - | chr5.2:82523695-82523714 | None:intergenic | 45.0% | |
!! | AGAGGGTGGACTTACAGTTT+TGG | - | chr5.2:82523192-82523211 | None:intergenic | 45.0% |
!!! | GGCAACTTTTGGTTTGTTGG+TGG | + | chr5.2:82523880-82523899 | MS.gene91968:CDS | 45.0% |
ACCGGCAAATGTTGGAGTTG+AGG | - | chr5.2:82523537-82523556 | None:intergenic | 50.0% | |
GAGTTGAGGCAGTTTGGCTA+AGG | - | chr5.2:82523523-82523542 | None:intergenic | 50.0% | |
GCCTCAACTCCAACATTTGC+CGG | + | chr5.2:82523533-82523552 | MS.gene91968:CDS | 50.0% | |
TCAACTCCAACATTTGCCGG+TGG | + | chr5.2:82523536-82523555 | MS.gene91968:CDS | 50.0% | |
! | ACGATTTGCTCCCAGCACTT+TGG | - | chr5.2:82523784-82523803 | None:intergenic | 50.0% |
!! | TCTAATGTAGGTGCTGGTGC+CGG | - | chr5.2:82523239-82523258 | None:intergenic | 50.0% |
TCAGCTGCAGGCGCAATTTC+AGG | - | chr5.2:82523749-82523768 | None:intergenic | 55.0% | |
TCAGCTGGAGAATCAGCTGC+AGG | - | chr5.2:82523761-82523780 | None:intergenic | 55.0% | |
TCTCCAGCTGACCAAAGTGC+TGG | + | chr5.2:82523770-82523789 | MS.gene91968:CDS | 55.0% | |
! | CTCCAGCTGACCAAAGTGCT+GGG | + | chr5.2:82523771-82523790 | MS.gene91968:CDS | 55.0% |
! | GCAATTTCAGGTGTGGGTGC+AGG | - | chr5.2:82523737-82523756 | None:intergenic | 55.0% |
! | GCAGGCGCAATTTCAGGTGT+GGG | - | chr5.2:82523743-82523762 | None:intergenic | 55.0% |
! | TGCAGGCGCAATTTCAGGTG+TGG | - | chr5.2:82523744-82523763 | None:intergenic | 55.0% |
CTCCCAGCACTTTGGTCAGC+TGG | - | chr5.2:82523776-82523795 | None:intergenic | 60.0% | |
AGCCGGAGTTGGACTCTCGG+GGG | - | chr5.2:82523216-82523235 | None:intergenic | 65.0% | |
AGTTGGACTCTCGGGGGGAG+AGG | - | chr5.2:82523210-82523229 | None:intergenic | 65.0% | |
CGAGAGTCCAACTCCGGCTC+CGG | + | chr5.2:82523217-82523236 | MS.gene91968:CDS | 65.0% | |
CGGAGCCGGAGTTGGACTCT+CGG | - | chr5.2:82523219-82523238 | None:intergenic | 65.0% | |
GAGCCGGAGTTGGACTCTCG+GGG | - | chr5.2:82523217-82523236 | None:intergenic | 65.0% | |
GGAGCCGGAGTTGGACTCTC+GGG | - | chr5.2:82523218-82523237 | None:intergenic | 65.0% | |
GTTGGACTCTCGGGGGGAGA+GGG | - | chr5.2:82523209-82523228 | None:intergenic | 65.0% | |
TCAGGTGTGGGTGCAGGAGC+CGG | - | chr5.2:82523731-82523750 | None:intergenic | 65.0% | |
TCCCCCCGAGAGTCCAACTC+CGG | + | chr5.2:82523211-82523230 | MS.gene91968:CDS | 65.0% | |
GCCGGAGTTGGACTCTCGGG+GGG | - | chr5.2:82523215-82523234 | None:intergenic | 70.0% | |
GGTGCAGGAGCCGGAACAGG+AGG | - | chr5.2:82523722-82523741 | None:intergenic | 70.0% | |
GTGGGTGCAGGAGCCGGAAC+AGG | - | chr5.2:82523725-82523744 | None:intergenic | 70.0% | |
!! | GTAGGTGCTGGTGCCGGAGC+CGG | - | chr5.2:82523233-82523252 | None:intergenic | 70.0% |
GGACTCTCGGGGGGAGAGGG+TGG | - | chr5.2:82523206-82523225 | None:intergenic | 75.0% | |
! | GCTGGTGCCGGAGCCGGAGT+TGG | - | chr5.2:82523227-82523246 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 82523125 | 82523913 | 82523125 | ID=MS.gene91968 |
chr5.2 | mRNA | 82523125 | 82523913 | 82523125 | ID=MS.gene91968.t1;Parent=MS.gene91968 |
chr5.2 | exon | 82523125 | 82523913 | 82523125 | ID=MS.gene91968.t1.exon1;Parent=MS.gene91968.t1 |
chr5.2 | CDS | 82523125 | 82523913 | 82523125 | ID=cds.MS.gene91968.t1;Parent=MS.gene91968.t1 |
Gene Sequence |
Protein sequence |